data_5IIB # _entry.id 5IIB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5IIB pdb_00005iib 10.2210/pdb5iib/pdb WWPDB D_1000218323 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-06-14 2 'Structure model' 1 1 2017-06-28 3 'Structure model' 1 2 2017-09-06 4 'Structure model' 1 3 2017-11-29 5 'Structure model' 2 0 2020-07-29 6 'Structure model' 2 1 2024-01-10 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Atomic model' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Non-polymer description' 8 5 'Structure model' 'Structure summary' 9 6 'Structure model' 'Data collection' 10 6 'Structure model' 'Database references' 11 6 'Structure model' 'Refinement description' 12 6 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' pdbx_audit_support 4 4 'Structure model' pdbx_database_related 5 5 'Structure model' atom_site 6 5 'Structure model' chem_comp 7 5 'Structure model' entity 8 5 'Structure model' entity_name_com 9 5 'Structure model' pdbx_branch_scheme 10 5 'Structure model' pdbx_chem_comp_identifier 11 5 'Structure model' pdbx_entity_branch 12 5 'Structure model' pdbx_entity_branch_descriptor 13 5 'Structure model' pdbx_entity_branch_link 14 5 'Structure model' pdbx_entity_branch_list 15 5 'Structure model' pdbx_entity_nonpoly 16 5 'Structure model' pdbx_molecule_features 17 5 'Structure model' pdbx_nonpoly_scheme 18 5 'Structure model' struct_conn 19 5 'Structure model' struct_site 20 5 'Structure model' struct_site_gen 21 6 'Structure model' chem_comp 22 6 'Structure model' chem_comp_atom 23 6 'Structure model' chem_comp_bond 24 6 'Structure model' database_2 25 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.page_first' 7 2 'Structure model' '_citation.page_last' 8 2 'Structure model' '_citation.pdbx_database_id_DOI' 9 2 'Structure model' '_citation.pdbx_database_id_PubMed' 10 2 'Structure model' '_citation.title' 11 2 'Structure model' '_citation_author.name' 12 3 'Structure model' '_pdbx_audit_support.funding_organization' 13 4 'Structure model' '_pdbx_database_related.db_id' 14 5 'Structure model' '_atom_site.B_iso_or_equiv' 15 5 'Structure model' '_atom_site.Cartn_x' 16 5 'Structure model' '_atom_site.Cartn_y' 17 5 'Structure model' '_atom_site.Cartn_z' 18 5 'Structure model' '_atom_site.auth_asym_id' 19 5 'Structure model' '_atom_site.auth_atom_id' 20 5 'Structure model' '_atom_site.auth_comp_id' 21 5 'Structure model' '_atom_site.auth_seq_id' 22 5 'Structure model' '_atom_site.label_asym_id' 23 5 'Structure model' '_atom_site.label_atom_id' 24 5 'Structure model' '_atom_site.label_comp_id' 25 5 'Structure model' '_atom_site.label_entity_id' 26 5 'Structure model' '_atom_site.occupancy' 27 5 'Structure model' '_atom_site.type_symbol' 28 5 'Structure model' '_chem_comp.formula' 29 5 'Structure model' '_chem_comp.formula_weight' 30 5 'Structure model' '_chem_comp.id' 31 5 'Structure model' '_chem_comp.mon_nstd_flag' 32 5 'Structure model' '_chem_comp.name' 33 5 'Structure model' '_chem_comp.type' 34 5 'Structure model' '_entity.formula_weight' 35 5 'Structure model' '_entity.pdbx_description' 36 5 'Structure model' '_entity.src_method' 37 5 'Structure model' '_entity.type' 38 6 'Structure model' '_chem_comp.pdbx_synonyms' 39 6 'Structure model' '_database_2.pdbx_DOI' 40 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5IIB _pdbx_database_status.recvd_initial_deposition_date 2016-03-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 1LIS unspecified PDB . 2LIS unspecified PDB . 1LYN unspecified PDB . 2LYN unspecified PDB . 3D4C unspecified PDB . 3D4G unspecified PDB . 3EF7 unspecified PDB . 3NK3 unspecified PDB . 3NK4 unspecified PDB 'Related entry under submission' 5II7 unspecified PDB 'Related entry under submission' 5II8 unspecified PDB 'Related entry under submission' 5II9 unspecified PDB 'Related entry under submission' 5II5 unspecified PDB 'Related entry under submission' 5II4 unspecified PDB 'Related entry under submission' 5IIC unspecified PDB 'Related entry under submission' 5IIA unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Raj, I.' 1 ? 'Sadat Al-Hosseini, H.' 2 ? 'Nishimura, K.' 3 ? 'De Sanctis, D.' 4 ? 'Jovine, L.' 5 ? # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? ? ? ? primary Cell ? ? 1097-4172 ? ? 169 ? 1315 1326.e17 'Structural Basis of Egg Coat-Sperm Recognition at Fertilization.' 2017 ? 10.1016/j.cell.2017.05.033 28622512 ? ? ? ? ? ? ? ? US ? ? 1 'Mol. Biol. Evol.' ? ? 1537-1719 ? ? 28 ? 1963 1966 'The molecular basis of sex: linking yeast to human.' 2011 ? 10.1093/molbev/msr026 21282709 ? ? ? ? ? ? ? ? US ? ? 2 'Proc. Natl. Acad. Sci. U.S.A.' PNASA6 0040 0027-8424 ? ? 103 ? 17302 17307 'Rapidly evolving zona pellucida domain proteins are a major component of the vitelline envelope of abalone eggs.' 2006 ? ? 17085584 ? ? ? ? ? ? ? ? NE ? ? 3 Gene GENED6 0861 0378-1119 ? ? 288 ? 111 117 'Full-length sequence of VERL, the egg vitelline envelope receptor for abalone sperm lysin.' 2002 ? ? 12034500 ? ? ? ? ? ? ? ? DK ? ? 4 'Acta Crystallogr. D Biol. Crystallogr.' ABCRE6 0766 0907-4449 ? ? 56 ? 34 41 ;1.35 and 2.07 A resolution structures of the red abalone sperm lysin monomer and dimer reveal features involved in receptor binding. ; 2000 ? ? 10666624 ? ? ? ? ? ? ? ? US ? ? 5 'Proc. Natl. Acad. Sci. U.S.A.' PNASA6 0040 0027-8424 ? ? 94 ? 6724 6729 'The abalone egg vitelline envelope receptor for sperm lysin is a giant multivalent molecule.' 1997 ? ? 9192632 ? ? ? ? ? ? ? ? US ? ? 6 'J. Cell Biol.' JCLBA3 2019 0021-9525 ? ? 130 ? 1117 1125 ;Crystal structure and subunit dynamics of the abalone sperm lysin dimer: egg envelopes dissociate dimers, the monomer is the active species. ; 1995 ? ? 7657696 ? ? ? ? ? ? ? ? US ? ? 7 Science SCIEAS 0038 0036-8075 ? ? 262 ? 1864 1867 'The crystal structure of lysin, a fertilization protein.' 1993 ? ? 8266073 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Raj, I.' 1 ? primary 'Sadat Al Hosseini, H.' 2 ? primary 'Dioguardi, E.' 3 ? primary 'Nishimura, K.' 4 ? primary 'Han, L.' 5 ? primary 'Villa, A.' 6 ? primary 'de Sanctis, D.' 7 ? primary 'Jovine, L.' 8 ? 1 'Swanson, W.J.' 9 ? 1 'Aagaard, J.E.' 10 ? 1 'Vacquier, V.D.' 11 ? 1 'Monne, M.' 12 ? 1 'Sadat Al Hosseini, H.' 13 ? 1 'Jovine, L.' 14 ? 2 'Aagaard, J.E.' 15 ? 2 'Yi, X.' 16 ? 2 'MacCoss, M.J.' 17 ? 2 'Swanson, W.J.' 18 ? 3 'Galindo, B.E.' 19 ? 3 'Moy, G.W.' 20 ? 3 'Swanson, W.J.' 21 ? 3 'Vacquier, V.D.' 22 ? 4 'Kresge, N.' 23 ? 4 'Vacquier, V.D.' 24 ? 4 'Stout, C.D.' 25 ? 5 'Swanson, W.J.' 26 ? 5 'Vacquier, V.D.' 27 ? 6 'Shaw, A.' 28 ? 6 'Fortes, P.A.' 29 ? 6 'Stout, C.D.' 30 ? 6 'Vacquier, V.D.' 31 ? 7 'Shaw, A.' 32 ? 7 'McRee, D.E.' 33 ? 7 'Vacquier, V.D.' 34 ? 7 'Stout, C.D.' 35 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Egg-lysin 16295.218 1 ? ? ? ? 2 polymer man 'Vitelline envelope sperm lysin receptor' 14432.386 1 ? ? ? ? 3 branched man 'beta-D-fructofuranose-(2-1)-alpha-D-glucopyranose' 342.297 1 ? ? ? ? 4 non-polymer syn '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' 238.305 1 ? ? ? ? 5 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 6 water nat water 18.015 126 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 Sperm-lysin 3 sucrose # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;RSWHYVEPKFLNKAFEVALKVQIIAGFDRGLVKWLRVHGRTLSTVQKKALYFVNRRYMQTHWANYMLWINKKIDALGRTP VVGDYTRLGAEIGRRIDMAYFYDFLKDKNMIPKYLPYMEEINRMRPADVPVKYMGK ; ;RSWHYVEPKFLNKAFEVALKVQIIAGFDRGLVKWLRVHGRTLSTVQKKALYFVNRRYMQTHWANYMLWINKKIDALGRTP VVGDYTRLGAEIGRRIDMAYFYDFLKDKNMIPKYLPYMEEINRMRPADVPVKYMGK ; A ? 2 'polypeptide(L)' no no ;ETGAAADWDVYCSQDESIPAKFISRLVTSKDQALEKTEINCSNGLVPITQEFGINMMLIQYTRNELLDSPGMCVFWGPYS VPKNDTVVLYTVTARLKWSEGPPTNLSIQCYMPKSPVAPKLEHHHHHH ; ;ETGAAADWDVYCSQDESIPAKFISRLVTSKDQALEKTEINCSNGLVPITQEFGINMMLIQYTRNELLDSPGMCVFWGPYS VPKNDTVVLYTVTARLKWSEGPPTNLSIQCYMPKSPVAPKLEHHHHHH ; B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' EPE 5 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 SER n 1 3 TRP n 1 4 HIS n 1 5 TYR n 1 6 VAL n 1 7 GLU n 1 8 PRO n 1 9 LYS n 1 10 PHE n 1 11 LEU n 1 12 ASN n 1 13 LYS n 1 14 ALA n 1 15 PHE n 1 16 GLU n 1 17 VAL n 1 18 ALA n 1 19 LEU n 1 20 LYS n 1 21 VAL n 1 22 GLN n 1 23 ILE n 1 24 ILE n 1 25 ALA n 1 26 GLY n 1 27 PHE n 1 28 ASP n 1 29 ARG n 1 30 GLY n 1 31 LEU n 1 32 VAL n 1 33 LYS n 1 34 TRP n 1 35 LEU n 1 36 ARG n 1 37 VAL n 1 38 HIS n 1 39 GLY n 1 40 ARG n 1 41 THR n 1 42 LEU n 1 43 SER n 1 44 THR n 1 45 VAL n 1 46 GLN n 1 47 LYS n 1 48 LYS n 1 49 ALA n 1 50 LEU n 1 51 TYR n 1 52 PHE n 1 53 VAL n 1 54 ASN n 1 55 ARG n 1 56 ARG n 1 57 TYR n 1 58 MET n 1 59 GLN n 1 60 THR n 1 61 HIS n 1 62 TRP n 1 63 ALA n 1 64 ASN n 1 65 TYR n 1 66 MET n 1 67 LEU n 1 68 TRP n 1 69 ILE n 1 70 ASN n 1 71 LYS n 1 72 LYS n 1 73 ILE n 1 74 ASP n 1 75 ALA n 1 76 LEU n 1 77 GLY n 1 78 ARG n 1 79 THR n 1 80 PRO n 1 81 VAL n 1 82 VAL n 1 83 GLY n 1 84 ASP n 1 85 TYR n 1 86 THR n 1 87 ARG n 1 88 LEU n 1 89 GLY n 1 90 ALA n 1 91 GLU n 1 92 ILE n 1 93 GLY n 1 94 ARG n 1 95 ARG n 1 96 ILE n 1 97 ASP n 1 98 MET n 1 99 ALA n 1 100 TYR n 1 101 PHE n 1 102 TYR n 1 103 ASP n 1 104 PHE n 1 105 LEU n 1 106 LYS n 1 107 ASP n 1 108 LYS n 1 109 ASN n 1 110 MET n 1 111 ILE n 1 112 PRO n 1 113 LYS n 1 114 TYR n 1 115 LEU n 1 116 PRO n 1 117 TYR n 1 118 MET n 1 119 GLU n 1 120 GLU n 1 121 ILE n 1 122 ASN n 1 123 ARG n 1 124 MET n 1 125 ARG n 1 126 PRO n 1 127 ALA n 1 128 ASP n 1 129 VAL n 1 130 PRO n 1 131 VAL n 1 132 LYS n 1 133 TYR n 1 134 MET n 1 135 GLY n 1 136 LYS n 2 1 GLU n 2 2 THR n 2 3 GLY n 2 4 ALA n 2 5 ALA n 2 6 ALA n 2 7 ASP n 2 8 TRP n 2 9 ASP n 2 10 VAL n 2 11 TYR n 2 12 CYS n 2 13 SER n 2 14 GLN n 2 15 ASP n 2 16 GLU n 2 17 SER n 2 18 ILE n 2 19 PRO n 2 20 ALA n 2 21 LYS n 2 22 PHE n 2 23 ILE n 2 24 SER n 2 25 ARG n 2 26 LEU n 2 27 VAL n 2 28 THR n 2 29 SER n 2 30 LYS n 2 31 ASP n 2 32 GLN n 2 33 ALA n 2 34 LEU n 2 35 GLU n 2 36 LYS n 2 37 THR n 2 38 GLU n 2 39 ILE n 2 40 ASN n 2 41 CYS n 2 42 SER n 2 43 ASN n 2 44 GLY n 2 45 LEU n 2 46 VAL n 2 47 PRO n 2 48 ILE n 2 49 THR n 2 50 GLN n 2 51 GLU n 2 52 PHE n 2 53 GLY n 2 54 ILE n 2 55 ASN n 2 56 MET n 2 57 MET n 2 58 LEU n 2 59 ILE n 2 60 GLN n 2 61 TYR n 2 62 THR n 2 63 ARG n 2 64 ASN n 2 65 GLU n 2 66 LEU n 2 67 LEU n 2 68 ASP n 2 69 SER n 2 70 PRO n 2 71 GLY n 2 72 MET n 2 73 CYS n 2 74 VAL n 2 75 PHE n 2 76 TRP n 2 77 GLY n 2 78 PRO n 2 79 TYR n 2 80 SER n 2 81 VAL n 2 82 PRO n 2 83 LYS n 2 84 ASN n 2 85 ASP n 2 86 THR n 2 87 VAL n 2 88 VAL n 2 89 LEU n 2 90 TYR n 2 91 THR n 2 92 VAL n 2 93 THR n 2 94 ALA n 2 95 ARG n 2 96 LEU n 2 97 LYS n 2 98 TRP n 2 99 SER n 2 100 GLU n 2 101 GLY n 2 102 PRO n 2 103 PRO n 2 104 THR n 2 105 ASN n 2 106 LEU n 2 107 SER n 2 108 ILE n 2 109 GLN n 2 110 CYS n 2 111 TYR n 2 112 MET n 2 113 PRO n 2 114 LYS n 2 115 SER n 2 116 PRO n 2 117 VAL n 2 118 ALA n 2 119 PRO n 2 120 LYS n 2 121 LEU n 2 122 GLU n 2 123 HIS n 2 124 HIS n 2 125 HIS n 2 126 HIS n 2 127 HIS n 2 128 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 136 'California red abalone' ? ? ? ? ? ? ? ? 'Haliotis rufescens' 6454 ? ? ? ? ? ? ? Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK-293S ? ? ? ? ? Plasmid pHLsec ? ? ? ? ? 2 1 sample 'Biological sequence' 1 128 'California red abalone' ? VERL ? ? ? ? ? ? 'Haliotis rufescens' 6454 ? ? ? ? ? ? ? Human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK-293S ? ? ? ? ? Plasmid pHLsec ? ? ? ? ? 5 2 sample ? ? ? 'California red abalone' ? ? ? ? ? ? ? ? 'Haliotis rufescens' 6454 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? HEK-293S ? ? ? ? ? plasmid ? ? ? pHLsec ? ? # _pdbx_entity_branch.entity_id 3 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 3 DFrufb2-1DGlcpa 'Glycam Condensed Sequence' GMML 1.0 2 3 'WURCS=2.0/2,2,1/[ha122h-2b_2-5][a2122h-1a_1-5]/1-2/a2-b1' WURCS PDB2Glycan 1.1.0 3 3 '[][b-D-Fruf]{[(2+1)][a-D-Glcp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 3 _pdbx_entity_branch_link.entity_branch_list_num_1 1 _pdbx_entity_branch_link.comp_id_1 GLC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 2 _pdbx_entity_branch_link.comp_id_2 FRU _pdbx_entity_branch_link.atom_id_2 O2 _pdbx_entity_branch_link.leaving_atom_id_2 HO2 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EPE non-polymer . '4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID' HEPES 'C8 H18 N2 O4 S' 238.305 FRU 'D-saccharide, beta linking' . beta-D-fructofuranose 'beta-D-fructose; D-fructose; fructose' 'C6 H12 O6' 180.156 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FRU 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DFrufb FRU 'COMMON NAME' GMML 1.0 b-D-fructofuranose FRU 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Fruf FRU 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fru GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 19 ? ? ? A . n A 1 2 SER 2 20 ? ? ? A . n A 1 3 TRP 3 21 ? ? ? A . n A 1 4 HIS 4 22 ? ? ? A . n A 1 5 TYR 5 23 ? ? ? A . n A 1 6 VAL 6 24 ? ? ? A . n A 1 7 GLU 7 25 ? ? ? A . n A 1 8 PRO 8 26 ? ? ? A . n A 1 9 LYS 9 27 ? ? ? A . n A 1 10 PHE 10 28 28 PHE PHE A . n A 1 11 LEU 11 29 29 LEU LEU A . n A 1 12 ASN 12 30 30 ASN ASN A . n A 1 13 LYS 13 31 31 LYS LYS A . n A 1 14 ALA 14 32 32 ALA ALA A . n A 1 15 PHE 15 33 33 PHE PHE A . n A 1 16 GLU 16 34 34 GLU GLU A . n A 1 17 VAL 17 35 35 VAL VAL A . n A 1 18 ALA 18 36 36 ALA ALA A . n A 1 19 LEU 19 37 37 LEU LEU A . n A 1 20 LYS 20 38 38 LYS LYS A . n A 1 21 VAL 21 39 39 VAL VAL A . n A 1 22 GLN 22 40 40 GLN GLN A . n A 1 23 ILE 23 41 41 ILE ILE A . n A 1 24 ILE 24 42 42 ILE ILE A . n A 1 25 ALA 25 43 43 ALA ALA A . n A 1 26 GLY 26 44 44 GLY GLY A . n A 1 27 PHE 27 45 45 PHE PHE A . n A 1 28 ASP 28 46 46 ASP ASP A . n A 1 29 ARG 29 47 47 ARG ARG A . n A 1 30 GLY 30 48 48 GLY GLY A . n A 1 31 LEU 31 49 49 LEU LEU A . n A 1 32 VAL 32 50 50 VAL VAL A . n A 1 33 LYS 33 51 51 LYS LYS A . n A 1 34 TRP 34 52 52 TRP TRP A . n A 1 35 LEU 35 53 53 LEU LEU A . n A 1 36 ARG 36 54 54 ARG ARG A . n A 1 37 VAL 37 55 55 VAL VAL A . n A 1 38 HIS 38 56 56 HIS HIS A . n A 1 39 GLY 39 57 57 GLY GLY A . n A 1 40 ARG 40 58 58 ARG ARG A . n A 1 41 THR 41 59 59 THR THR A . n A 1 42 LEU 42 60 60 LEU LEU A . n A 1 43 SER 43 61 61 SER SER A . n A 1 44 THR 44 62 62 THR THR A . n A 1 45 VAL 45 63 63 VAL VAL A . n A 1 46 GLN 46 64 64 GLN GLN A . n A 1 47 LYS 47 65 65 LYS LYS A . n A 1 48 LYS 48 66 66 LYS LYS A . n A 1 49 ALA 49 67 67 ALA ALA A . n A 1 50 LEU 50 68 68 LEU LEU A . n A 1 51 TYR 51 69 69 TYR TYR A . n A 1 52 PHE 52 70 70 PHE PHE A . n A 1 53 VAL 53 71 71 VAL VAL A . n A 1 54 ASN 54 72 72 ASN ASN A . n A 1 55 ARG 55 73 73 ARG ARG A . n A 1 56 ARG 56 74 74 ARG ARG A . n A 1 57 TYR 57 75 75 TYR TYR A . n A 1 58 MET 58 76 76 MET MET A . n A 1 59 GLN 59 77 77 GLN GLN A . n A 1 60 THR 60 78 78 THR THR A . n A 1 61 HIS 61 79 79 HIS HIS A . n A 1 62 TRP 62 80 80 TRP TRP A . n A 1 63 ALA 63 81 81 ALA ALA A . n A 1 64 ASN 64 82 82 ASN ASN A . n A 1 65 TYR 65 83 83 TYR TYR A . n A 1 66 MET 66 84 84 MET MET A . n A 1 67 LEU 67 85 85 LEU LEU A . n A 1 68 TRP 68 86 86 TRP TRP A . n A 1 69 ILE 69 87 87 ILE ILE A . n A 1 70 ASN 70 88 88 ASN ASN A . n A 1 71 LYS 71 89 89 LYS LYS A . n A 1 72 LYS 72 90 90 LYS LYS A . n A 1 73 ILE 73 91 91 ILE ILE A . n A 1 74 ASP 74 92 92 ASP ASP A . n A 1 75 ALA 75 93 93 ALA ALA A . n A 1 76 LEU 76 94 94 LEU LEU A . n A 1 77 GLY 77 95 95 GLY GLY A . n A 1 78 ARG 78 96 96 ARG ARG A . n A 1 79 THR 79 97 97 THR THR A . n A 1 80 PRO 80 98 98 PRO PRO A . n A 1 81 VAL 81 99 99 VAL VAL A . n A 1 82 VAL 82 100 100 VAL VAL A . n A 1 83 GLY 83 101 101 GLY GLY A . n A 1 84 ASP 84 102 102 ASP ASP A . n A 1 85 TYR 85 103 103 TYR TYR A . n A 1 86 THR 86 104 104 THR THR A . n A 1 87 ARG 87 105 105 ARG ARG A . n A 1 88 LEU 88 106 106 LEU LEU A . n A 1 89 GLY 89 107 107 GLY GLY A . n A 1 90 ALA 90 108 108 ALA ALA A . n A 1 91 GLU 91 109 109 GLU GLU A . n A 1 92 ILE 92 110 110 ILE ILE A . n A 1 93 GLY 93 111 111 GLY GLY A . n A 1 94 ARG 94 112 112 ARG ARG A . n A 1 95 ARG 95 113 113 ARG ARG A . n A 1 96 ILE 96 114 114 ILE ILE A . n A 1 97 ASP 97 115 115 ASP ASP A . n A 1 98 MET 98 116 116 MET MET A . n A 1 99 ALA 99 117 117 ALA ALA A . n A 1 100 TYR 100 118 118 TYR TYR A . n A 1 101 PHE 101 119 119 PHE PHE A . n A 1 102 TYR 102 120 120 TYR TYR A . n A 1 103 ASP 103 121 121 ASP ASP A . n A 1 104 PHE 104 122 122 PHE PHE A . n A 1 105 LEU 105 123 123 LEU LEU A . n A 1 106 LYS 106 124 124 LYS LYS A . n A 1 107 ASP 107 125 125 ASP ASP A . n A 1 108 LYS 108 126 126 LYS LYS A . n A 1 109 ASN 109 127 127 ASN ASN A . n A 1 110 MET 110 128 128 MET MET A . n A 1 111 ILE 111 129 129 ILE ILE A . n A 1 112 PRO 112 130 130 PRO PRO A . n A 1 113 LYS 113 131 131 LYS LYS A . n A 1 114 TYR 114 132 132 TYR TYR A . n A 1 115 LEU 115 133 133 LEU LEU A . n A 1 116 PRO 116 134 134 PRO PRO A . n A 1 117 TYR 117 135 135 TYR TYR A . n A 1 118 MET 118 136 136 MET MET A . n A 1 119 GLU 119 137 137 GLU GLU A . n A 1 120 GLU 120 138 138 GLU GLU A . n A 1 121 ILE 121 139 139 ILE ILE A . n A 1 122 ASN 122 140 140 ASN ASN A . n A 1 123 ARG 123 141 141 ARG ARG A . n A 1 124 MET 124 142 142 MET MET A . n A 1 125 ARG 125 143 143 ARG ARG A . n A 1 126 PRO 126 144 144 PRO PRO A . n A 1 127 ALA 127 145 145 ALA ALA A . n A 1 128 ASP 128 146 146 ASP ASP A . n A 1 129 VAL 129 147 147 VAL VAL A . n A 1 130 PRO 130 148 148 PRO PRO A . n A 1 131 VAL 131 149 149 VAL VAL A . n A 1 132 LYS 132 150 150 LYS LYS A . n A 1 133 TYR 133 151 151 TYR TYR A . n A 1 134 MET 134 152 ? ? ? A . n A 1 135 GLY 135 153 ? ? ? A . n A 1 136 LYS 136 154 ? ? ? A . n B 2 1 GLU 1 334 ? ? ? B . n B 2 2 THR 2 335 ? ? ? B . n B 2 3 GLY 3 336 ? ? ? B . n B 2 4 ALA 4 337 ? ? ? B . n B 2 5 ALA 5 338 338 ALA ALA B . n B 2 6 ALA 6 339 339 ALA ALA B . n B 2 7 ASP 7 340 340 ASP ASP B . n B 2 8 TRP 8 341 341 TRP TRP B . n B 2 9 ASP 9 342 342 ASP ASP B . n B 2 10 VAL 10 343 343 VAL VAL B . n B 2 11 TYR 11 344 344 TYR TYR B . n B 2 12 CYS 12 345 345 CYS CYS B . n B 2 13 SER 13 346 346 SER SER B . n B 2 14 GLN 14 347 347 GLN GLN B . n B 2 15 ASP 15 348 348 ASP ASP B . n B 2 16 GLU 16 349 349 GLU GLU B . n B 2 17 SER 17 350 350 SER SER B . n B 2 18 ILE 18 351 351 ILE ILE B . n B 2 19 PRO 19 352 352 PRO PRO B . n B 2 20 ALA 20 353 353 ALA ALA B . n B 2 21 LYS 21 354 354 LYS LYS B . n B 2 22 PHE 22 355 355 PHE PHE B . n B 2 23 ILE 23 356 356 ILE ILE B . n B 2 24 SER 24 357 357 SER SER B . n B 2 25 ARG 25 358 358 ARG ARG B . n B 2 26 LEU 26 359 359 LEU LEU B . n B 2 27 VAL 27 360 360 VAL VAL B . n B 2 28 THR 28 361 361 THR THR B . n B 2 29 SER 29 362 362 SER SER B . n B 2 30 LYS 30 363 ? ? ? B . n B 2 31 ASP 31 364 ? ? ? B . n B 2 32 GLN 32 365 365 GLN GLN B . n B 2 33 ALA 33 366 366 ALA ALA B . n B 2 34 LEU 34 367 367 LEU LEU B . n B 2 35 GLU 35 368 368 GLU GLU B . n B 2 36 LYS 36 369 369 LYS LYS B . n B 2 37 THR 37 370 370 THR THR B . n B 2 38 GLU 38 371 371 GLU GLU B . n B 2 39 ILE 39 372 372 ILE ILE B . n B 2 40 ASN 40 373 373 ASN ASN B . n B 2 41 CYS 41 374 374 CYS CYS B . n B 2 42 SER 42 375 375 SER SER B . n B 2 43 ASN 43 376 376 ASN ASN B . n B 2 44 GLY 44 377 377 GLY GLY B . n B 2 45 LEU 45 378 378 LEU LEU B . n B 2 46 VAL 46 379 379 VAL VAL B . n B 2 47 PRO 47 380 380 PRO PRO B . n B 2 48 ILE 48 381 381 ILE ILE B . n B 2 49 THR 49 382 382 THR THR B . n B 2 50 GLN 50 383 383 GLN GLN B . n B 2 51 GLU 51 384 384 GLU GLU B . n B 2 52 PHE 52 385 385 PHE PHE B . n B 2 53 GLY 53 386 386 GLY GLY B . n B 2 54 ILE 54 387 387 ILE ILE B . n B 2 55 ASN 55 388 388 ASN ASN B . n B 2 56 MET 56 389 389 MET MET B . n B 2 57 MET 57 390 390 MET MET B . n B 2 58 LEU 58 391 391 LEU LEU B . n B 2 59 ILE 59 392 392 ILE ILE B . n B 2 60 GLN 60 393 393 GLN GLN B . n B 2 61 TYR 61 394 394 TYR TYR B . n B 2 62 THR 62 395 395 THR THR B . n B 2 63 ARG 63 396 396 ARG ARG B . n B 2 64 ASN 64 397 397 ASN ASN B . n B 2 65 GLU 65 398 398 GLU GLU B . n B 2 66 LEU 66 399 399 LEU LEU B . n B 2 67 LEU 67 400 400 LEU LEU B . n B 2 68 ASP 68 401 401 ASP ASP B . n B 2 69 SER 69 402 402 SER SER B . n B 2 70 PRO 70 403 403 PRO PRO B . n B 2 71 GLY 71 404 404 GLY GLY B . n B 2 72 MET 72 405 405 MET MET B . n B 2 73 CYS 73 406 406 CYS CYS B . n B 2 74 VAL 74 407 407 VAL VAL B . n B 2 75 PHE 75 408 408 PHE PHE B . n B 2 76 TRP 76 409 409 TRP TRP B . n B 2 77 GLY 77 410 410 GLY GLY B . n B 2 78 PRO 78 411 411 PRO PRO B . n B 2 79 TYR 79 412 412 TYR TYR B . n B 2 80 SER 80 413 413 SER SER B . n B 2 81 VAL 81 414 414 VAL VAL B . n B 2 82 PRO 82 415 415 PRO PRO B . n B 2 83 LYS 83 416 416 LYS LYS B . n B 2 84 ASN 84 417 417 ASN ASN B . n B 2 85 ASP 85 418 418 ASP ASP B . n B 2 86 THR 86 419 419 THR THR B . n B 2 87 VAL 87 420 420 VAL VAL B . n B 2 88 VAL 88 421 421 VAL VAL B . n B 2 89 LEU 89 422 422 LEU LEU B . n B 2 90 TYR 90 423 423 TYR TYR B . n B 2 91 THR 91 424 424 THR THR B . n B 2 92 VAL 92 425 425 VAL VAL B . n B 2 93 THR 93 426 426 THR THR B . n B 2 94 ALA 94 427 427 ALA ALA B . n B 2 95 ARG 95 428 428 ARG ARG B . n B 2 96 LEU 96 429 429 LEU LEU B . n B 2 97 LYS 97 430 430 LYS LYS B . n B 2 98 TRP 98 431 431 TRP TRP B . n B 2 99 SER 99 432 432 SER SER B . n B 2 100 GLU 100 433 433 GLU GLU B . n B 2 101 GLY 101 434 434 GLY GLY B . n B 2 102 PRO 102 435 435 PRO PRO B . n B 2 103 PRO 103 436 436 PRO PRO B . n B 2 104 THR 104 437 437 THR THR B . n B 2 105 ASN 105 438 438 ASN ASN B . n B 2 106 LEU 106 439 439 LEU LEU B . n B 2 107 SER 107 440 440 SER SER B . n B 2 108 ILE 108 441 441 ILE ILE B . n B 2 109 GLN 109 442 442 GLN GLN B . n B 2 110 CYS 110 443 443 CYS CYS B . n B 2 111 TYR 111 444 444 TYR TYR B . n B 2 112 MET 112 445 445 MET MET B . n B 2 113 PRO 113 446 446 PRO PRO B . n B 2 114 LYS 114 447 447 LYS LYS B . n B 2 115 SER 115 448 ? ? ? B . n B 2 116 PRO 116 449 ? ? ? B . n B 2 117 VAL 117 450 ? ? ? B . n B 2 118 ALA 118 451 ? ? ? B . n B 2 119 PRO 119 452 ? ? ? B . n B 2 120 LYS 120 453 ? ? ? B . n B 2 121 LEU 121 454 ? ? ? B . n B 2 122 GLU 122 455 ? ? ? B . n B 2 123 HIS 123 456 ? ? ? B . n B 2 124 HIS 124 457 ? ? ? B . n B 2 125 HIS 125 458 ? ? ? B . n B 2 126 HIS 126 459 ? ? ? B . n B 2 127 HIS 127 460 ? ? ? B . n B 2 128 HIS 128 461 ? ? ? B . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 3 GLC 1 C GLC 1 B SUC 501 n C 3 FRU 2 C FRU 2 B SUC 501 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EPE 1 900 900 EPE EPE A . E 5 NAG 1 502 502 NAG NAG B . F 5 NAG 1 503 503 NAG NAG B . G 6 HOH 1 1001 1001 HOH HOH A . G 6 HOH 2 1002 1002 HOH HOH A . G 6 HOH 3 1003 1003 HOH HOH A . G 6 HOH 4 1004 1004 HOH HOH A . G 6 HOH 5 1005 1005 HOH HOH A . G 6 HOH 6 1006 1006 HOH HOH A . G 6 HOH 7 1007 1007 HOH HOH A . G 6 HOH 8 1008 1008 HOH HOH A . G 6 HOH 9 1009 1009 HOH HOH A . G 6 HOH 10 1010 1010 HOH HOH A . G 6 HOH 11 1011 1011 HOH HOH A . G 6 HOH 12 1012 1012 HOH HOH A . G 6 HOH 13 1013 1013 HOH HOH A . G 6 HOH 14 1014 1014 HOH HOH A . G 6 HOH 15 1015 1015 HOH HOH A . G 6 HOH 16 1016 1016 HOH HOH A . G 6 HOH 17 1017 1017 HOH HOH A . G 6 HOH 18 1018 1018 HOH HOH A . G 6 HOH 19 1019 1019 HOH HOH A . G 6 HOH 20 1020 1020 HOH HOH A . G 6 HOH 21 1021 1021 HOH HOH A . G 6 HOH 22 1022 1022 HOH HOH A . G 6 HOH 23 1023 1023 HOH HOH A . G 6 HOH 24 1024 1024 HOH HOH A . G 6 HOH 25 1025 1025 HOH HOH A . G 6 HOH 26 1026 1026 HOH HOH A . G 6 HOH 27 1027 1027 HOH HOH A . G 6 HOH 28 1028 1028 HOH HOH A . G 6 HOH 29 1029 1029 HOH HOH A . G 6 HOH 30 1030 1030 HOH HOH A . G 6 HOH 31 1031 1031 HOH HOH A . G 6 HOH 32 1032 1032 HOH HOH A . G 6 HOH 33 1033 1033 HOH HOH A . G 6 HOH 34 1034 1034 HOH HOH A . G 6 HOH 35 1035 1035 HOH HOH A . G 6 HOH 36 1036 1036 HOH HOH A . G 6 HOH 37 1037 1037 HOH HOH A . G 6 HOH 38 1038 1038 HOH HOH A . G 6 HOH 39 1039 1039 HOH HOH A . G 6 HOH 40 1040 1040 HOH HOH A . G 6 HOH 41 1041 1041 HOH HOH A . G 6 HOH 42 1042 1042 HOH HOH A . G 6 HOH 43 1043 1043 HOH HOH A . G 6 HOH 44 1044 1044 HOH HOH A . G 6 HOH 45 1045 1045 HOH HOH A . G 6 HOH 46 1046 1046 HOH HOH A . G 6 HOH 47 1047 1047 HOH HOH A . G 6 HOH 48 1048 1048 HOH HOH A . G 6 HOH 49 1049 1049 HOH HOH A . G 6 HOH 50 1050 1050 HOH HOH A . G 6 HOH 51 1051 1051 HOH HOH A . G 6 HOH 52 1052 1052 HOH HOH A . G 6 HOH 53 1053 1053 HOH HOH A . G 6 HOH 54 1054 1054 HOH HOH A . G 6 HOH 55 1055 1055 HOH HOH A . G 6 HOH 56 1056 1056 HOH HOH A . G 6 HOH 57 1057 1057 HOH HOH A . G 6 HOH 58 1058 1058 HOH HOH A . G 6 HOH 59 1059 1059 HOH HOH A . G 6 HOH 60 1060 1060 HOH HOH A . G 6 HOH 61 1061 1061 HOH HOH A . G 6 HOH 62 1062 1062 HOH HOH A . G 6 HOH 63 1063 1063 HOH HOH A . G 6 HOH 64 1064 1064 HOH HOH A . G 6 HOH 65 1065 1065 HOH HOH A . G 6 HOH 66 1066 1066 HOH HOH A . G 6 HOH 67 1067 1067 HOH HOH A . G 6 HOH 68 1068 1068 HOH HOH A . H 6 HOH 1 601 601 HOH HOH B . H 6 HOH 2 602 602 HOH HOH B . H 6 HOH 3 603 603 HOH HOH B . H 6 HOH 4 604 604 HOH HOH B . H 6 HOH 5 605 605 HOH HOH B . H 6 HOH 6 606 606 HOH HOH B . H 6 HOH 7 607 607 HOH HOH B . H 6 HOH 8 608 608 HOH HOH B . H 6 HOH 9 609 609 HOH HOH B . H 6 HOH 10 610 610 HOH HOH B . H 6 HOH 11 611 611 HOH HOH B . H 6 HOH 12 612 612 HOH HOH B . H 6 HOH 13 613 613 HOH HOH B . H 6 HOH 14 614 614 HOH HOH B . H 6 HOH 15 615 615 HOH HOH B . H 6 HOH 16 616 616 HOH HOH B . H 6 HOH 17 617 617 HOH HOH B . H 6 HOH 18 618 618 HOH HOH B . H 6 HOH 19 619 619 HOH HOH B . H 6 HOH 20 620 620 HOH HOH B . H 6 HOH 21 621 621 HOH HOH B . H 6 HOH 22 622 622 HOH HOH B . H 6 HOH 23 623 623 HOH HOH B . H 6 HOH 24 624 624 HOH HOH B . H 6 HOH 25 625 625 HOH HOH B . H 6 HOH 26 626 626 HOH HOH B . H 6 HOH 27 627 627 HOH HOH B . H 6 HOH 28 628 628 HOH HOH B . H 6 HOH 29 629 629 HOH HOH B . H 6 HOH 30 630 630 HOH HOH B . H 6 HOH 31 631 631 HOH HOH B . H 6 HOH 32 632 632 HOH HOH B . H 6 HOH 33 633 633 HOH HOH B . H 6 HOH 34 634 634 HOH HOH B . H 6 HOH 35 635 635 HOH HOH B . H 6 HOH 36 636 636 HOH HOH B . H 6 HOH 37 637 637 HOH HOH B . H 6 HOH 38 638 638 HOH HOH B . H 6 HOH 39 639 639 HOH HOH B . H 6 HOH 40 640 640 HOH HOH B . H 6 HOH 41 641 641 HOH HOH B . H 6 HOH 42 642 642 HOH HOH B . H 6 HOH 43 643 643 HOH HOH B . H 6 HOH 44 644 644 HOH HOH B . H 6 HOH 45 645 645 HOH HOH B . H 6 HOH 46 646 646 HOH HOH B . H 6 HOH 47 647 647 HOH HOH B . H 6 HOH 48 648 648 HOH HOH B . H 6 HOH 49 649 649 HOH HOH B . H 6 HOH 50 650 650 HOH HOH B . H 6 HOH 51 651 651 HOH HOH B . H 6 HOH 52 652 652 HOH HOH B . H 6 HOH 53 653 653 HOH HOH B . H 6 HOH 54 654 654 HOH HOH B . H 6 HOH 55 655 655 HOH HOH B . H 6 HOH 56 656 656 HOH HOH B . H 6 HOH 57 657 657 HOH HOH B . H 6 HOH 58 658 658 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.10.1_2155 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20141118 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? 20141118 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 5 # _cell.entry_id 5IIB _cell.length_a 64.500 _cell.length_b 64.500 _cell.length_c 129.930 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5IIB _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5IIB _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.55 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 51.8 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.6 M ammonium sulfate, 0.1 M citric acid' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M-F' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-04-23 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97625 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97625 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_synchrotron_site ESRF # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5IIB _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 32.250 _reflns.d_resolution_high 1.640 _reflns.number_obs 39159 _reflns.number_all ? _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs 0.04848 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.4300 _reflns.B_iso_Wilson_estimate 34.67 _reflns.pdbx_redundancy 5.400 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.64 _reflns_shell.d_res_low 1.70 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 2.08700 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 0.850 _reflns_shell.pdbx_redundancy 5.50 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 5IIB _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 38973 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.25 _refine.ls_d_res_high 1.64 _refine.ls_percent_reflns_obs 99.5 _refine.ls_R_factor_obs 0.191 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.190 _refine.ls_R_factor_R_free 0.205 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.750 _refine.ls_number_reflns_R_free 1850 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 0.80 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.50 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model 2LIS _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.270 _refine.pdbx_overall_phase_error 27.470 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1893 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 66 _refine_hist.number_atoms_solvent 126 _refine_hist.number_atoms_total 2085 _refine_hist.d_res_high 1.64 _refine_hist.d_res_low 32.25 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.006 ? ? 2020 'X-RAY DIFFRACTION' ? f_angle_d 0.908 ? ? 2746 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 10.632 ? ? 1212 'X-RAY DIFFRACTION' ? f_chiral_restr 0.052 ? ? 305 'X-RAY DIFFRACTION' ? f_plane_restr 0.006 ? ? 336 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.6400 1.6843 2792 0.4104 99.00 0.4670 . . 137 . . 'X-RAY DIFFRACTION' . 1.6843 1.7339 2792 0.3647 99.00 0.3796 . . 139 . . 'X-RAY DIFFRACTION' . 1.7339 1.7899 2855 0.3269 100.00 0.3240 . . 140 . . 'X-RAY DIFFRACTION' . 1.7899 1.8538 2788 0.2987 100.00 0.3349 . . 141 . . 'X-RAY DIFFRACTION' . 1.8538 1.9280 2840 0.2669 100.00 0.3011 . . 142 . . 'X-RAY DIFFRACTION' . 1.9280 2.0158 2854 0.2280 100.00 0.2350 . . 141 . . 'X-RAY DIFFRACTION' . 2.0158 2.1220 2801 0.2034 100.00 0.2104 . . 141 . . 'X-RAY DIFFRACTION' . 2.1220 2.2550 2857 0.1941 100.00 0.2140 . . 142 . . 'X-RAY DIFFRACTION' . 2.2550 2.4290 2849 0.1908 100.00 0.1895 . . 140 . . 'X-RAY DIFFRACTION' . 2.4290 2.6733 2880 0.1973 100.00 0.2218 . . 145 . . 'X-RAY DIFFRACTION' . 2.6733 3.0599 2873 0.2023 99.00 0.2447 . . 144 . . 'X-RAY DIFFRACTION' . 3.0599 3.8542 2915 0.1754 100.00 0.2010 . . 143 . . 'X-RAY DIFFRACTION' . 3.8542 32.2562 3027 0.1610 99.00 0.1597 . . 155 . . # _struct.entry_id 5IIB _struct.title 'Crystal structure of red abalone egg VERL repeat 3 in complex with sperm lysin at 1.64 A resolution (crystal form II)' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5IIB _struct_keywords.text ;CELL ADHESION, FERTILIZATION, EGG-SPERM INTERACTION, GAMETE RECOGNITION, SPERM RECEPTOR, EGG COAT, VITELLINE ENVELOPE, ZP DOMAIN, ZP-N DOMAIN, SPERM ACROSOME, EGG COAT PENETRATION ; _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP ELYS_HALRU P04552 ? 1 ;RSWHYVEPKFLNKAFEVALKVQIIAGFDRGLVKWLRVHGRTLSTVQKKALYFVNRRYMQTHWANYMLWINKKIDALGRTP VVGDYTRLGAEIGRRIDMAYFYDFLKDKNMIPKYLPYMEEINRMRPADVPVKYMGK ; 19 2 UNP Q8WR62_HALRU Q8WR62 ? 2 ;DWDVYCSQDESIPAKFISRLVTSKDQALEKTEINCSNGLVPITQEFGINMMLIQYTRNELLDSPGMCVFWGPYSVPKNDT VVLYTVTARLKWSEGPPTNLSIQCYMPKSPVAPK ; 340 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5IIB A 1 ? 136 ? P04552 19 ? 154 ? 19 154 2 2 5IIB B 7 ? 120 ? Q8WR62 340 ? 453 ? 340 453 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 2 5IIB GLU B 1 ? UNP Q8WR62 ? ? 'expression tag' 334 1 2 5IIB THR B 2 ? UNP Q8WR62 ? ? 'expression tag' 335 2 2 5IIB GLY B 3 ? UNP Q8WR62 ? ? 'expression tag' 336 3 2 5IIB ALA B 4 ? UNP Q8WR62 ? ? 'expression tag' 337 4 2 5IIB ALA B 5 ? UNP Q8WR62 ? ? 'expression tag' 338 5 2 5IIB ALA B 6 ? UNP Q8WR62 ? ? 'expression tag' 339 6 2 5IIB LEU B 121 ? UNP Q8WR62 ? ? 'expression tag' 454 7 2 5IIB GLU B 122 ? UNP Q8WR62 ? ? 'expression tag' 455 8 2 5IIB HIS B 123 ? UNP Q8WR62 ? ? 'expression tag' 456 9 2 5IIB HIS B 124 ? UNP Q8WR62 ? ? 'expression tag' 457 10 2 5IIB HIS B 125 ? UNP Q8WR62 ? ? 'expression tag' 458 11 2 5IIB HIS B 126 ? UNP Q8WR62 ? ? 'expression tag' 459 12 2 5IIB HIS B 127 ? UNP Q8WR62 ? ? 'expression tag' 460 13 2 5IIB HIS B 128 ? UNP Q8WR62 ? ? 'expression tag' 461 14 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3590 ? 1 MORE -9 ? 1 'SSA (A^2)' 12500 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASN A 12 ? GLY A 39 ? ASN A 30 GLY A 57 1 ? 28 HELX_P HELX_P2 AA2 SER A 43 ? ALA A 75 ? SER A 61 ALA A 93 1 ? 33 HELX_P HELX_P3 AA3 VAL A 81 ? ARG A 95 ? VAL A 99 ARG A 113 1 ? 15 HELX_P HELX_P4 AA4 MET A 98 ? LYS A 108 ? MET A 116 LYS A 126 1 ? 11 HELX_P HELX_P5 AA5 LEU A 115 ? ARG A 123 ? LEU A 133 ARG A 141 1 ? 9 HELX_P HELX_P6 AA6 ARG A 125 ? VAL A 129 ? ARG A 143 VAL A 147 5 ? 5 HELX_P HELX_P7 AA7 THR B 62 ? LEU B 66 ? THR B 395 LEU B 399 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? B CYS 12 SG ? ? ? 1_555 B CYS 110 SG ? ? B CYS 345 B CYS 443 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? B CYS 41 SG ? ? ? 1_555 B CYS 73 SG ? ? B CYS 374 B CYS 406 1_555 ? ? ? ? ? ? ? 2.040 ? ? covale1 covale one ? B ASN 40 ND2 ? ? ? 1_555 E NAG . C1 ? ? B ASN 373 B NAG 502 1_555 ? ? ? ? ? ? ? 1.426 ? N-Glycosylation covale2 covale one ? B ASN 84 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 417 B NAG 503 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation covale3 covale both ? C GLC . C1 ? ? ? 1_555 C FRU . O2 ? ? C GLC 1 C FRU 2 1_555 ? ? ? ? ? ? ? 1.409 sing ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 77 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 410 _struct_mon_prot_cis.auth_asym_id B _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 78 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 411 _struct_mon_prot_cis.pdbx_auth_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 5.87 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 4 ? AA3 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA B 6 ? TYR B 11 ? ALA B 339 TYR B 344 AA1 2 ALA B 20 ? LEU B 26 ? ALA B 353 LEU B 359 AA1 3 ILE B 54 ? ILE B 59 ? ILE B 387 ILE B 392 AA2 1 GLY B 44 ? ILE B 48 ? GLY B 377 ILE B 381 AA2 2 LEU B 34 ? CYS B 41 ? LEU B 367 CYS B 374 AA2 3 VAL B 87 ? TRP B 98 ? VAL B 420 TRP B 431 AA2 4 TRP B 76 ? SER B 80 ? TRP B 409 SER B 413 AA3 1 GLY B 44 ? ILE B 48 ? GLY B 377 ILE B 381 AA3 2 LEU B 34 ? CYS B 41 ? LEU B 367 CYS B 374 AA3 3 VAL B 87 ? TRP B 98 ? VAL B 420 TRP B 431 AA3 4 THR B 104 ? PRO B 113 ? THR B 437 PRO B 446 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP B 7 ? N ASP B 340 O ARG B 25 ? O ARG B 358 AA1 2 3 N PHE B 22 ? N PHE B 355 O MET B 57 ? O MET B 390 AA2 1 2 O VAL B 46 ? O VAL B 379 N ILE B 39 ? N ILE B 372 AA2 2 3 N ASN B 40 ? N ASN B 373 O THR B 93 ? O THR B 426 AA2 3 4 O THR B 91 ? O THR B 424 N TRP B 76 ? N TRP B 409 AA3 1 2 O VAL B 46 ? O VAL B 379 N ILE B 39 ? N ILE B 372 AA3 2 3 N ASN B 40 ? N ASN B 373 O THR B 93 ? O THR B 426 AA3 3 4 N LEU B 96 ? N LEU B 429 O THR B 104 ? O THR B 437 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 ND2 _pdbx_validate_close_contact.auth_asym_id_1 B _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 373 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O5 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 502 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # _pdbx_molecule_features.prd_id PRD_900003 _pdbx_molecule_features.name sucrose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class Nutrient _pdbx_molecule_features.details 'oligosaccharide with reducing-end-to-reducing-end glycosidic bond' # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900003 _pdbx_molecule.asym_id C # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id B _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 635 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 26.9412 -4.4696 8.2782 0.3949 0.3316 0.3561 -0.0364 0.0068 0.0147 0.5410 0.9331 1.0372 0.7097 -0.0559 -0.1492 0.0463 -0.1022 -0.0043 0.2046 -0.0831 -0.0382 0.0459 0.0021 -0.0000 'X-RAY DIFFRACTION' 2 ? refined 31.4910 -1.1140 -11.1172 0.4275 0.2781 0.3513 -0.0210 -0.0242 0.0213 0.5456 0.3716 1.0882 0.4089 -0.0731 -0.2659 0.0308 0.0112 -0.0048 -0.0681 -0.0381 -0.0098 0.0608 0.0477 0.0000 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? 'CHAIN A AND NOT (RESNAME EPE)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? 'CHAIN B AND NOT (RESNAME SUC)' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ARG 19 ? A ARG 1 2 1 Y 1 A SER 20 ? A SER 2 3 1 Y 1 A TRP 21 ? A TRP 3 4 1 Y 1 A HIS 22 ? A HIS 4 5 1 Y 1 A TYR 23 ? A TYR 5 6 1 Y 1 A VAL 24 ? A VAL 6 7 1 Y 1 A GLU 25 ? A GLU 7 8 1 Y 1 A PRO 26 ? A PRO 8 9 1 Y 1 A LYS 27 ? A LYS 9 10 1 Y 1 A MET 152 ? A MET 134 11 1 Y 1 A GLY 153 ? A GLY 135 12 1 Y 1 A LYS 154 ? A LYS 136 13 1 Y 1 B GLU 334 ? B GLU 1 14 1 Y 1 B THR 335 ? B THR 2 15 1 Y 1 B GLY 336 ? B GLY 3 16 1 Y 1 B ALA 337 ? B ALA 4 17 1 Y 1 B LYS 363 ? B LYS 30 18 1 Y 1 B ASP 364 ? B ASP 31 19 1 Y 1 B SER 448 ? B SER 115 20 1 Y 1 B PRO 449 ? B PRO 116 21 1 Y 1 B VAL 450 ? B VAL 117 22 1 Y 1 B ALA 451 ? B ALA 118 23 1 Y 1 B PRO 452 ? B PRO 119 24 1 Y 1 B LYS 453 ? B LYS 120 25 1 Y 1 B LEU 454 ? B LEU 121 26 1 Y 1 B GLU 455 ? B GLU 122 27 1 Y 1 B HIS 456 ? B HIS 123 28 1 Y 1 B HIS 457 ? B HIS 124 29 1 Y 1 B HIS 458 ? B HIS 125 30 1 Y 1 B HIS 459 ? B HIS 126 31 1 Y 1 B HIS 460 ? B HIS 127 32 1 Y 1 B HIS 461 ? B HIS 128 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EPE N1 N N N 88 EPE C2 C N N 89 EPE C3 C N N 90 EPE N4 N N N 91 EPE C5 C N N 92 EPE C6 C N N 93 EPE C7 C N N 94 EPE C8 C N N 95 EPE O8 O N N 96 EPE C9 C N N 97 EPE C10 C N N 98 EPE S S N N 99 EPE O1S O N N 100 EPE O2S O N N 101 EPE O3S O N N 102 EPE H21 H N N 103 EPE H22 H N N 104 EPE H31 H N N 105 EPE H32 H N N 106 EPE H51 H N N 107 EPE H52 H N N 108 EPE H61 H N N 109 EPE H62 H N N 110 EPE H71 H N N 111 EPE H72 H N N 112 EPE H81 H N N 113 EPE H82 H N N 114 EPE HO8 H N N 115 EPE H91 H N N 116 EPE H92 H N N 117 EPE H101 H N N 118 EPE H102 H N N 119 EPE HOS3 H N N 120 FRU C1 C N N 121 FRU C2 C N R 122 FRU C3 C N S 123 FRU C4 C N S 124 FRU C5 C N R 125 FRU C6 C N N 126 FRU O1 O N N 127 FRU O2 O N N 128 FRU O3 O N N 129 FRU O4 O N N 130 FRU O5 O N N 131 FRU O6 O N N 132 FRU H11 H N N 133 FRU H12 H N N 134 FRU H3 H N N 135 FRU H4 H N N 136 FRU H5 H N N 137 FRU H61 H N N 138 FRU H62 H N N 139 FRU HO1 H N N 140 FRU HO2 H N N 141 FRU HO3 H N N 142 FRU HO4 H N N 143 FRU HO6 H N N 144 GLC C1 C N S 145 GLC C2 C N R 146 GLC C3 C N S 147 GLC C4 C N S 148 GLC C5 C N R 149 GLC C6 C N N 150 GLC O1 O N N 151 GLC O2 O N N 152 GLC O3 O N N 153 GLC O4 O N N 154 GLC O5 O N N 155 GLC O6 O N N 156 GLC H1 H N N 157 GLC H2 H N N 158 GLC H3 H N N 159 GLC H4 H N N 160 GLC H5 H N N 161 GLC H61 H N N 162 GLC H62 H N N 163 GLC HO1 H N N 164 GLC HO2 H N N 165 GLC HO3 H N N 166 GLC HO4 H N N 167 GLC HO6 H N N 168 GLN N N N N 169 GLN CA C N S 170 GLN C C N N 171 GLN O O N N 172 GLN CB C N N 173 GLN CG C N N 174 GLN CD C N N 175 GLN OE1 O N N 176 GLN NE2 N N N 177 GLN OXT O N N 178 GLN H H N N 179 GLN H2 H N N 180 GLN HA H N N 181 GLN HB2 H N N 182 GLN HB3 H N N 183 GLN HG2 H N N 184 GLN HG3 H N N 185 GLN HE21 H N N 186 GLN HE22 H N N 187 GLN HXT H N N 188 GLU N N N N 189 GLU CA C N S 190 GLU C C N N 191 GLU O O N N 192 GLU CB C N N 193 GLU CG C N N 194 GLU CD C N N 195 GLU OE1 O N N 196 GLU OE2 O N N 197 GLU OXT O N N 198 GLU H H N N 199 GLU H2 H N N 200 GLU HA H N N 201 GLU HB2 H N N 202 GLU HB3 H N N 203 GLU HG2 H N N 204 GLU HG3 H N N 205 GLU HE2 H N N 206 GLU HXT H N N 207 GLY N N N N 208 GLY CA C N N 209 GLY C C N N 210 GLY O O N N 211 GLY OXT O N N 212 GLY H H N N 213 GLY H2 H N N 214 GLY HA2 H N N 215 GLY HA3 H N N 216 GLY HXT H N N 217 HIS N N N N 218 HIS CA C N S 219 HIS C C N N 220 HIS O O N N 221 HIS CB C N N 222 HIS CG C Y N 223 HIS ND1 N Y N 224 HIS CD2 C Y N 225 HIS CE1 C Y N 226 HIS NE2 N Y N 227 HIS OXT O N N 228 HIS H H N N 229 HIS H2 H N N 230 HIS HA H N N 231 HIS HB2 H N N 232 HIS HB3 H N N 233 HIS HD1 H N N 234 HIS HD2 H N N 235 HIS HE1 H N N 236 HIS HE2 H N N 237 HIS HXT H N N 238 HOH O O N N 239 HOH H1 H N N 240 HOH H2 H N N 241 ILE N N N N 242 ILE CA C N S 243 ILE C C N N 244 ILE O O N N 245 ILE CB C N S 246 ILE CG1 C N N 247 ILE CG2 C N N 248 ILE CD1 C N N 249 ILE OXT O N N 250 ILE H H N N 251 ILE H2 H N N 252 ILE HA H N N 253 ILE HB H N N 254 ILE HG12 H N N 255 ILE HG13 H N N 256 ILE HG21 H N N 257 ILE HG22 H N N 258 ILE HG23 H N N 259 ILE HD11 H N N 260 ILE HD12 H N N 261 ILE HD13 H N N 262 ILE HXT H N N 263 LEU N N N N 264 LEU CA C N S 265 LEU C C N N 266 LEU O O N N 267 LEU CB C N N 268 LEU CG C N N 269 LEU CD1 C N N 270 LEU CD2 C N N 271 LEU OXT O N N 272 LEU H H N N 273 LEU H2 H N N 274 LEU HA H N N 275 LEU HB2 H N N 276 LEU HB3 H N N 277 LEU HG H N N 278 LEU HD11 H N N 279 LEU HD12 H N N 280 LEU HD13 H N N 281 LEU HD21 H N N 282 LEU HD22 H N N 283 LEU HD23 H N N 284 LEU HXT H N N 285 LYS N N N N 286 LYS CA C N S 287 LYS C C N N 288 LYS O O N N 289 LYS CB C N N 290 LYS CG C N N 291 LYS CD C N N 292 LYS CE C N N 293 LYS NZ N N N 294 LYS OXT O N N 295 LYS H H N N 296 LYS H2 H N N 297 LYS HA H N N 298 LYS HB2 H N N 299 LYS HB3 H N N 300 LYS HG2 H N N 301 LYS HG3 H N N 302 LYS HD2 H N N 303 LYS HD3 H N N 304 LYS HE2 H N N 305 LYS HE3 H N N 306 LYS HZ1 H N N 307 LYS HZ2 H N N 308 LYS HZ3 H N N 309 LYS HXT H N N 310 MET N N N N 311 MET CA C N S 312 MET C C N N 313 MET O O N N 314 MET CB C N N 315 MET CG C N N 316 MET SD S N N 317 MET CE C N N 318 MET OXT O N N 319 MET H H N N 320 MET H2 H N N 321 MET HA H N N 322 MET HB2 H N N 323 MET HB3 H N N 324 MET HG2 H N N 325 MET HG3 H N N 326 MET HE1 H N N 327 MET HE2 H N N 328 MET HE3 H N N 329 MET HXT H N N 330 NAG C1 C N R 331 NAG C2 C N R 332 NAG C3 C N R 333 NAG C4 C N S 334 NAG C5 C N R 335 NAG C6 C N N 336 NAG C7 C N N 337 NAG C8 C N N 338 NAG N2 N N N 339 NAG O1 O N N 340 NAG O3 O N N 341 NAG O4 O N N 342 NAG O5 O N N 343 NAG O6 O N N 344 NAG O7 O N N 345 NAG H1 H N N 346 NAG H2 H N N 347 NAG H3 H N N 348 NAG H4 H N N 349 NAG H5 H N N 350 NAG H61 H N N 351 NAG H62 H N N 352 NAG H81 H N N 353 NAG H82 H N N 354 NAG H83 H N N 355 NAG HN2 H N N 356 NAG HO1 H N N 357 NAG HO3 H N N 358 NAG HO4 H N N 359 NAG HO6 H N N 360 PHE N N N N 361 PHE CA C N S 362 PHE C C N N 363 PHE O O N N 364 PHE CB C N N 365 PHE CG C Y N 366 PHE CD1 C Y N 367 PHE CD2 C Y N 368 PHE CE1 C Y N 369 PHE CE2 C Y N 370 PHE CZ C Y N 371 PHE OXT O N N 372 PHE H H N N 373 PHE H2 H N N 374 PHE HA H N N 375 PHE HB2 H N N 376 PHE HB3 H N N 377 PHE HD1 H N N 378 PHE HD2 H N N 379 PHE HE1 H N N 380 PHE HE2 H N N 381 PHE HZ H N N 382 PHE HXT H N N 383 PRO N N N N 384 PRO CA C N S 385 PRO C C N N 386 PRO O O N N 387 PRO CB C N N 388 PRO CG C N N 389 PRO CD C N N 390 PRO OXT O N N 391 PRO H H N N 392 PRO HA H N N 393 PRO HB2 H N N 394 PRO HB3 H N N 395 PRO HG2 H N N 396 PRO HG3 H N N 397 PRO HD2 H N N 398 PRO HD3 H N N 399 PRO HXT H N N 400 SER N N N N 401 SER CA C N S 402 SER C C N N 403 SER O O N N 404 SER CB C N N 405 SER OG O N N 406 SER OXT O N N 407 SER H H N N 408 SER H2 H N N 409 SER HA H N N 410 SER HB2 H N N 411 SER HB3 H N N 412 SER HG H N N 413 SER HXT H N N 414 THR N N N N 415 THR CA C N S 416 THR C C N N 417 THR O O N N 418 THR CB C N R 419 THR OG1 O N N 420 THR CG2 C N N 421 THR OXT O N N 422 THR H H N N 423 THR H2 H N N 424 THR HA H N N 425 THR HB H N N 426 THR HG1 H N N 427 THR HG21 H N N 428 THR HG22 H N N 429 THR HG23 H N N 430 THR HXT H N N 431 TRP N N N N 432 TRP CA C N S 433 TRP C C N N 434 TRP O O N N 435 TRP CB C N N 436 TRP CG C Y N 437 TRP CD1 C Y N 438 TRP CD2 C Y N 439 TRP NE1 N Y N 440 TRP CE2 C Y N 441 TRP CE3 C Y N 442 TRP CZ2 C Y N 443 TRP CZ3 C Y N 444 TRP CH2 C Y N 445 TRP OXT O N N 446 TRP H H N N 447 TRP H2 H N N 448 TRP HA H N N 449 TRP HB2 H N N 450 TRP HB3 H N N 451 TRP HD1 H N N 452 TRP HE1 H N N 453 TRP HE3 H N N 454 TRP HZ2 H N N 455 TRP HZ3 H N N 456 TRP HH2 H N N 457 TRP HXT H N N 458 TYR N N N N 459 TYR CA C N S 460 TYR C C N N 461 TYR O O N N 462 TYR CB C N N 463 TYR CG C Y N 464 TYR CD1 C Y N 465 TYR CD2 C Y N 466 TYR CE1 C Y N 467 TYR CE2 C Y N 468 TYR CZ C Y N 469 TYR OH O N N 470 TYR OXT O N N 471 TYR H H N N 472 TYR H2 H N N 473 TYR HA H N N 474 TYR HB2 H N N 475 TYR HB3 H N N 476 TYR HD1 H N N 477 TYR HD2 H N N 478 TYR HE1 H N N 479 TYR HE2 H N N 480 TYR HH H N N 481 TYR HXT H N N 482 VAL N N N N 483 VAL CA C N S 484 VAL C C N N 485 VAL O O N N 486 VAL CB C N N 487 VAL CG1 C N N 488 VAL CG2 C N N 489 VAL OXT O N N 490 VAL H H N N 491 VAL H2 H N N 492 VAL HA H N N 493 VAL HB H N N 494 VAL HG11 H N N 495 VAL HG12 H N N 496 VAL HG13 H N N 497 VAL HG21 H N N 498 VAL HG22 H N N 499 VAL HG23 H N N 500 VAL HXT H N N 501 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EPE N1 C2 sing N N 83 EPE N1 C6 sing N N 84 EPE N1 C9 sing N N 85 EPE C2 C3 sing N N 86 EPE C2 H21 sing N N 87 EPE C2 H22 sing N N 88 EPE C3 N4 sing N N 89 EPE C3 H31 sing N N 90 EPE C3 H32 sing N N 91 EPE N4 C5 sing N N 92 EPE N4 C7 sing N N 93 EPE C5 C6 sing N N 94 EPE C5 H51 sing N N 95 EPE C5 H52 sing N N 96 EPE C6 H61 sing N N 97 EPE C6 H62 sing N N 98 EPE C7 C8 sing N N 99 EPE C7 H71 sing N N 100 EPE C7 H72 sing N N 101 EPE C8 O8 sing N N 102 EPE C8 H81 sing N N 103 EPE C8 H82 sing N N 104 EPE O8 HO8 sing N N 105 EPE C9 C10 sing N N 106 EPE C9 H91 sing N N 107 EPE C9 H92 sing N N 108 EPE C10 S sing N N 109 EPE C10 H101 sing N N 110 EPE C10 H102 sing N N 111 EPE S O1S doub N N 112 EPE S O2S doub N N 113 EPE S O3S sing N N 114 EPE O3S HOS3 sing N N 115 FRU C1 C2 sing N N 116 FRU C1 O1 sing N N 117 FRU C1 H11 sing N N 118 FRU C1 H12 sing N N 119 FRU C2 C3 sing N N 120 FRU C2 O2 sing N N 121 FRU C2 O5 sing N N 122 FRU C3 C4 sing N N 123 FRU C3 O3 sing N N 124 FRU C3 H3 sing N N 125 FRU C4 C5 sing N N 126 FRU C4 O4 sing N N 127 FRU C4 H4 sing N N 128 FRU C5 C6 sing N N 129 FRU C5 O5 sing N N 130 FRU C5 H5 sing N N 131 FRU C6 O6 sing N N 132 FRU C6 H61 sing N N 133 FRU C6 H62 sing N N 134 FRU O1 HO1 sing N N 135 FRU O2 HO2 sing N N 136 FRU O3 HO3 sing N N 137 FRU O4 HO4 sing N N 138 FRU O6 HO6 sing N N 139 GLC C1 C2 sing N N 140 GLC C1 O1 sing N N 141 GLC C1 O5 sing N N 142 GLC C1 H1 sing N N 143 GLC C2 C3 sing N N 144 GLC C2 O2 sing N N 145 GLC C2 H2 sing N N 146 GLC C3 C4 sing N N 147 GLC C3 O3 sing N N 148 GLC C3 H3 sing N N 149 GLC C4 C5 sing N N 150 GLC C4 O4 sing N N 151 GLC C4 H4 sing N N 152 GLC C5 C6 sing N N 153 GLC C5 O5 sing N N 154 GLC C5 H5 sing N N 155 GLC C6 O6 sing N N 156 GLC C6 H61 sing N N 157 GLC C6 H62 sing N N 158 GLC O1 HO1 sing N N 159 GLC O2 HO2 sing N N 160 GLC O3 HO3 sing N N 161 GLC O4 HO4 sing N N 162 GLC O6 HO6 sing N N 163 GLN N CA sing N N 164 GLN N H sing N N 165 GLN N H2 sing N N 166 GLN CA C sing N N 167 GLN CA CB sing N N 168 GLN CA HA sing N N 169 GLN C O doub N N 170 GLN C OXT sing N N 171 GLN CB CG sing N N 172 GLN CB HB2 sing N N 173 GLN CB HB3 sing N N 174 GLN CG CD sing N N 175 GLN CG HG2 sing N N 176 GLN CG HG3 sing N N 177 GLN CD OE1 doub N N 178 GLN CD NE2 sing N N 179 GLN NE2 HE21 sing N N 180 GLN NE2 HE22 sing N N 181 GLN OXT HXT sing N N 182 GLU N CA sing N N 183 GLU N H sing N N 184 GLU N H2 sing N N 185 GLU CA C sing N N 186 GLU CA CB sing N N 187 GLU CA HA sing N N 188 GLU C O doub N N 189 GLU C OXT sing N N 190 GLU CB CG sing N N 191 GLU CB HB2 sing N N 192 GLU CB HB3 sing N N 193 GLU CG CD sing N N 194 GLU CG HG2 sing N N 195 GLU CG HG3 sing N N 196 GLU CD OE1 doub N N 197 GLU CD OE2 sing N N 198 GLU OE2 HE2 sing N N 199 GLU OXT HXT sing N N 200 GLY N CA sing N N 201 GLY N H sing N N 202 GLY N H2 sing N N 203 GLY CA C sing N N 204 GLY CA HA2 sing N N 205 GLY CA HA3 sing N N 206 GLY C O doub N N 207 GLY C OXT sing N N 208 GLY OXT HXT sing N N 209 HIS N CA sing N N 210 HIS N H sing N N 211 HIS N H2 sing N N 212 HIS CA C sing N N 213 HIS CA CB sing N N 214 HIS CA HA sing N N 215 HIS C O doub N N 216 HIS C OXT sing N N 217 HIS CB CG sing N N 218 HIS CB HB2 sing N N 219 HIS CB HB3 sing N N 220 HIS CG ND1 sing Y N 221 HIS CG CD2 doub Y N 222 HIS ND1 CE1 doub Y N 223 HIS ND1 HD1 sing N N 224 HIS CD2 NE2 sing Y N 225 HIS CD2 HD2 sing N N 226 HIS CE1 NE2 sing Y N 227 HIS CE1 HE1 sing N N 228 HIS NE2 HE2 sing N N 229 HIS OXT HXT sing N N 230 HOH O H1 sing N N 231 HOH O H2 sing N N 232 ILE N CA sing N N 233 ILE N H sing N N 234 ILE N H2 sing N N 235 ILE CA C sing N N 236 ILE CA CB sing N N 237 ILE CA HA sing N N 238 ILE C O doub N N 239 ILE C OXT sing N N 240 ILE CB CG1 sing N N 241 ILE CB CG2 sing N N 242 ILE CB HB sing N N 243 ILE CG1 CD1 sing N N 244 ILE CG1 HG12 sing N N 245 ILE CG1 HG13 sing N N 246 ILE CG2 HG21 sing N N 247 ILE CG2 HG22 sing N N 248 ILE CG2 HG23 sing N N 249 ILE CD1 HD11 sing N N 250 ILE CD1 HD12 sing N N 251 ILE CD1 HD13 sing N N 252 ILE OXT HXT sing N N 253 LEU N CA sing N N 254 LEU N H sing N N 255 LEU N H2 sing N N 256 LEU CA C sing N N 257 LEU CA CB sing N N 258 LEU CA HA sing N N 259 LEU C O doub N N 260 LEU C OXT sing N N 261 LEU CB CG sing N N 262 LEU CB HB2 sing N N 263 LEU CB HB3 sing N N 264 LEU CG CD1 sing N N 265 LEU CG CD2 sing N N 266 LEU CG HG sing N N 267 LEU CD1 HD11 sing N N 268 LEU CD1 HD12 sing N N 269 LEU CD1 HD13 sing N N 270 LEU CD2 HD21 sing N N 271 LEU CD2 HD22 sing N N 272 LEU CD2 HD23 sing N N 273 LEU OXT HXT sing N N 274 LYS N CA sing N N 275 LYS N H sing N N 276 LYS N H2 sing N N 277 LYS CA C sing N N 278 LYS CA CB sing N N 279 LYS CA HA sing N N 280 LYS C O doub N N 281 LYS C OXT sing N N 282 LYS CB CG sing N N 283 LYS CB HB2 sing N N 284 LYS CB HB3 sing N N 285 LYS CG CD sing N N 286 LYS CG HG2 sing N N 287 LYS CG HG3 sing N N 288 LYS CD CE sing N N 289 LYS CD HD2 sing N N 290 LYS CD HD3 sing N N 291 LYS CE NZ sing N N 292 LYS CE HE2 sing N N 293 LYS CE HE3 sing N N 294 LYS NZ HZ1 sing N N 295 LYS NZ HZ2 sing N N 296 LYS NZ HZ3 sing N N 297 LYS OXT HXT sing N N 298 MET N CA sing N N 299 MET N H sing N N 300 MET N H2 sing N N 301 MET CA C sing N N 302 MET CA CB sing N N 303 MET CA HA sing N N 304 MET C O doub N N 305 MET C OXT sing N N 306 MET CB CG sing N N 307 MET CB HB2 sing N N 308 MET CB HB3 sing N N 309 MET CG SD sing N N 310 MET CG HG2 sing N N 311 MET CG HG3 sing N N 312 MET SD CE sing N N 313 MET CE HE1 sing N N 314 MET CE HE2 sing N N 315 MET CE HE3 sing N N 316 MET OXT HXT sing N N 317 NAG C1 C2 sing N N 318 NAG C1 O1 sing N N 319 NAG C1 O5 sing N N 320 NAG C1 H1 sing N N 321 NAG C2 C3 sing N N 322 NAG C2 N2 sing N N 323 NAG C2 H2 sing N N 324 NAG C3 C4 sing N N 325 NAG C3 O3 sing N N 326 NAG C3 H3 sing N N 327 NAG C4 C5 sing N N 328 NAG C4 O4 sing N N 329 NAG C4 H4 sing N N 330 NAG C5 C6 sing N N 331 NAG C5 O5 sing N N 332 NAG C5 H5 sing N N 333 NAG C6 O6 sing N N 334 NAG C6 H61 sing N N 335 NAG C6 H62 sing N N 336 NAG C7 C8 sing N N 337 NAG C7 N2 sing N N 338 NAG C7 O7 doub N N 339 NAG C8 H81 sing N N 340 NAG C8 H82 sing N N 341 NAG C8 H83 sing N N 342 NAG N2 HN2 sing N N 343 NAG O1 HO1 sing N N 344 NAG O3 HO3 sing N N 345 NAG O4 HO4 sing N N 346 NAG O6 HO6 sing N N 347 PHE N CA sing N N 348 PHE N H sing N N 349 PHE N H2 sing N N 350 PHE CA C sing N N 351 PHE CA CB sing N N 352 PHE CA HA sing N N 353 PHE C O doub N N 354 PHE C OXT sing N N 355 PHE CB CG sing N N 356 PHE CB HB2 sing N N 357 PHE CB HB3 sing N N 358 PHE CG CD1 doub Y N 359 PHE CG CD2 sing Y N 360 PHE CD1 CE1 sing Y N 361 PHE CD1 HD1 sing N N 362 PHE CD2 CE2 doub Y N 363 PHE CD2 HD2 sing N N 364 PHE CE1 CZ doub Y N 365 PHE CE1 HE1 sing N N 366 PHE CE2 CZ sing Y N 367 PHE CE2 HE2 sing N N 368 PHE CZ HZ sing N N 369 PHE OXT HXT sing N N 370 PRO N CA sing N N 371 PRO N CD sing N N 372 PRO N H sing N N 373 PRO CA C sing N N 374 PRO CA CB sing N N 375 PRO CA HA sing N N 376 PRO C O doub N N 377 PRO C OXT sing N N 378 PRO CB CG sing N N 379 PRO CB HB2 sing N N 380 PRO CB HB3 sing N N 381 PRO CG CD sing N N 382 PRO CG HG2 sing N N 383 PRO CG HG3 sing N N 384 PRO CD HD2 sing N N 385 PRO CD HD3 sing N N 386 PRO OXT HXT sing N N 387 SER N CA sing N N 388 SER N H sing N N 389 SER N H2 sing N N 390 SER CA C sing N N 391 SER CA CB sing N N 392 SER CA HA sing N N 393 SER C O doub N N 394 SER C OXT sing N N 395 SER CB OG sing N N 396 SER CB HB2 sing N N 397 SER CB HB3 sing N N 398 SER OG HG sing N N 399 SER OXT HXT sing N N 400 THR N CA sing N N 401 THR N H sing N N 402 THR N H2 sing N N 403 THR CA C sing N N 404 THR CA CB sing N N 405 THR CA HA sing N N 406 THR C O doub N N 407 THR C OXT sing N N 408 THR CB OG1 sing N N 409 THR CB CG2 sing N N 410 THR CB HB sing N N 411 THR OG1 HG1 sing N N 412 THR CG2 HG21 sing N N 413 THR CG2 HG22 sing N N 414 THR CG2 HG23 sing N N 415 THR OXT HXT sing N N 416 TRP N CA sing N N 417 TRP N H sing N N 418 TRP N H2 sing N N 419 TRP CA C sing N N 420 TRP CA CB sing N N 421 TRP CA HA sing N N 422 TRP C O doub N N 423 TRP C OXT sing N N 424 TRP CB CG sing N N 425 TRP CB HB2 sing N N 426 TRP CB HB3 sing N N 427 TRP CG CD1 doub Y N 428 TRP CG CD2 sing Y N 429 TRP CD1 NE1 sing Y N 430 TRP CD1 HD1 sing N N 431 TRP CD2 CE2 doub Y N 432 TRP CD2 CE3 sing Y N 433 TRP NE1 CE2 sing Y N 434 TRP NE1 HE1 sing N N 435 TRP CE2 CZ2 sing Y N 436 TRP CE3 CZ3 doub Y N 437 TRP CE3 HE3 sing N N 438 TRP CZ2 CH2 doub Y N 439 TRP CZ2 HZ2 sing N N 440 TRP CZ3 CH2 sing Y N 441 TRP CZ3 HZ3 sing N N 442 TRP CH2 HH2 sing N N 443 TRP OXT HXT sing N N 444 TYR N CA sing N N 445 TYR N H sing N N 446 TYR N H2 sing N N 447 TYR CA C sing N N 448 TYR CA CB sing N N 449 TYR CA HA sing N N 450 TYR C O doub N N 451 TYR C OXT sing N N 452 TYR CB CG sing N N 453 TYR CB HB2 sing N N 454 TYR CB HB3 sing N N 455 TYR CG CD1 doub Y N 456 TYR CG CD2 sing Y N 457 TYR CD1 CE1 sing Y N 458 TYR CD1 HD1 sing N N 459 TYR CD2 CE2 doub Y N 460 TYR CD2 HD2 sing N N 461 TYR CE1 CZ doub Y N 462 TYR CE1 HE1 sing N N 463 TYR CE2 CZ sing Y N 464 TYR CE2 HE2 sing N N 465 TYR CZ OH sing N N 466 TYR OH HH sing N N 467 TYR OXT HXT sing N N 468 VAL N CA sing N N 469 VAL N H sing N N 470 VAL N H2 sing N N 471 VAL CA C sing N N 472 VAL CA CB sing N N 473 VAL CA HA sing N N 474 VAL C O doub N N 475 VAL C OXT sing N N 476 VAL CB CG1 sing N N 477 VAL CB CG2 sing N N 478 VAL CB HB sing N N 479 VAL CG1 HG11 sing N N 480 VAL CG1 HG12 sing N N 481 VAL CG1 HG13 sing N N 482 VAL CG2 HG21 sing N N 483 VAL CG2 HG22 sing N N 484 VAL CG2 HG23 sing N N 485 VAL OXT HXT sing N N 486 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Karolinska Institutet' Sweden ? 1 'Swedish Research Council' Sweden 2012-5093 2 'Goran Gustafsson Foundation for Research in Natural Sciences and Medicine' Sweden ? 3 'Sven and Ebba-Christina Hagberg foundation' Sweden ? 4 'European Molecular Biology Organization' ? ? 5 'European Union' ? 'ERC 260759' 6 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 3 GLC 1 n 3 FRU 2 n # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2LIS _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5IIB _atom_sites.fract_transf_matrix[1][1] 0.015504 _atom_sites.fract_transf_matrix[1][2] 0.008951 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017902 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007696 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_