data_5IJ4 # _entry.id 5IJ4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5IJ4 WWPDB D_1000218631 BMRB 30030 # _pdbx_database_related.db_name BMRB _pdbx_database_related.db_id 30030 _pdbx_database_related.content_type unspecified _pdbx_database_related.details . # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5IJ4 _pdbx_database_status.recvd_initial_deposition_date 2016-03-01 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sun, Z.-Y.J.' 1 'Hanna, J.' 2 'Wagner, G.' 3 'Bhanu, M.K.' 4 'Allan, M.' 5 'Arthanari, H.' 6 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Plos One' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1932-6203 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 11 _citation.language ? _citation.page_first e0163660 _citation.page_last e0163660 _citation.title 'Solution Structure of the Cuz1 AN1 Zinc Finger Domain: An Exposed LDFLP Motif Defines a Subfamily of AN1 Proteins.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1371/journal.pone.0163660 _citation.pdbx_database_id_PubMed 27662200 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sun, Z.J.' 1 ? primary 'Bhanu, M.K.' 2 ? primary 'Allan, M.G.' 3 ? primary 'Arthanari, H.' 4 ? primary 'Wagner, G.' 5 ? primary 'Hanna, J.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'CDC48-associated ubiquitin-like/zinc finger protein 1' 6003.831 1 ? ? 'residues 11-59' ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'CDC48-associated UBL/Zn-finger protein 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MLDVGKHCAYCRQLDFLPFHCSFCNEDFCSNHRLKEDHHCRWLLEHEEV _entity_poly.pdbx_seq_one_letter_code_can MLDVGKHCAYCRQLDFLPFHCSFCNEDFCSNHRLKEDHHCRWLLEHEEV _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 ASP n 1 4 VAL n 1 5 GLY n 1 6 LYS n 1 7 HIS n 1 8 CYS n 1 9 ALA n 1 10 TYR n 1 11 CYS n 1 12 ARG n 1 13 GLN n 1 14 LEU n 1 15 ASP n 1 16 PHE n 1 17 LEU n 1 18 PRO n 1 19 PHE n 1 20 HIS n 1 21 CYS n 1 22 SER n 1 23 PHE n 1 24 CYS n 1 25 ASN n 1 26 GLU n 1 27 ASP n 1 28 PHE n 1 29 CYS n 1 30 SER n 1 31 ASN n 1 32 HIS n 1 33 ARG n 1 34 LEU n 1 35 LYS n 1 36 GLU n 1 37 ASP n 1 38 HIS n 1 39 HIS n 1 40 CYS n 1 41 ARG n 1 42 TRP n 1 43 LEU n 1 44 LEU n 1 45 GLU n 1 46 HIS n 1 47 GLU n 1 48 GLU n 1 49 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 49 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CUZ1, YNL155W, N1751' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant DE3 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pET45b _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details '6xHIS-Cuz1-AN1-ZnF (residues 11-59) in pET45b' _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pJH190 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CUZ1_YEAST _struct_ref.pdbx_db_accession P53899 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MLDVGKHCAYCRQLDFLPFHCSFCNEDFCSNHRLKEDHHCRWLLEHEEV _struct_ref.pdbx_align_begin 11 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5IJ4 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 49 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P53899 _struct_ref_seq.db_align_beg 11 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 59 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 11 _struct_ref_seq.pdbx_auth_seq_align_end 59 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '3D 1H-15N NOESY' 1 isotropic 2 1 2 '3D 1H-13C NOESY' 1 isotropic 3 1 2 '3D HNCA' 1 isotropic 4 1 2 '3D HN(CO)CA' 1 isotropic 5 1 2 '3D HNCO' 1 isotropic 6 1 2 '3D HN(CA)CO' 1 isotropic 7 1 2 '3D HNCACB' 1 isotropic 8 1 2 '3D HN(COCA)CB' 1 isotropic 9 1 2 '3D C(CO)NH' 1 isotropic 10 1 2 '3D H(CCO)NH' 1 isotropic 11 1 2 '3D HCCH-TOCSY' 1 isotropic 12 1 3 '2D NOESY' 2 isotropic 13 1 3 '2D TOCSY' 2 isotropic 14 1 2 '2D 1H-15N HSQC' 1 isotropic 15 1 2 '2D 1H-13C HSQC' 1 isotropic 16 1 2 '2D 1H-13C HSQC aromatic' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 25 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 50 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.label regular _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units C # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '1.0 mM [U-100% 15N] cuz1, 5 mM Tris, 50 mM NaCl, 0.2 mM ZnCl2, 1 mM DTT, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N-cuz1 solution ? 2 '0.7 mM [U-100% 13C; U-100% 15N] cuz1, 5 mM Tris, 50 mM NaCl, 0.2 mM ZnCl2, 1 mM DTT, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N/13C-cuz1 solution ? 3 '0.85 mM cuz1, 5 mM [U-2H] Tris, 50 mM NaCl, 0.2 mM ZnCl2, 1 mM [U-2H] DTT, 100% D2O' '100% D2O' 'unlabeled cuz1' solution ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 DD2 ? Agilent 600 ? 2 'AVANCE III' ? Bruker 750 ? # _pdbx_nmr_refine.entry_id 5IJ4 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'simulated annealing with torsion angle dynamics' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 5IJ4 _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 15 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5IJ4 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'structure calculation' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 2 'chemical shift assignment' CARA ? 'Keller and Wuthrich' 3 'peak picking' CARA ? 'Keller and Wuthrich' 4 processing hmsIST ? 'Hyberts, S.G and Wagner, G' 5 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 6 refinement CYANA ? 'Guntert, Mumenthaler and Wuthrich' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5IJ4 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5IJ4 _struct.title 'Solution structure of AN1-type zinc finger domain from Cuz1 (Cdc48 associated ubiquitin-like/zinc-finger protein-1)' _struct.pdbx_descriptor 'CDC48-associated ubiquitin-like/zinc finger protein 1' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 5IJ4 _struct_keywords.text 'METAL BINDING PROTEIN' _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 CYS A 29 ? ARG A 33 ? CYS A 39 ARG A 43 5 ? 5 HELX_P HELX_P2 AA2 LYS A 35 ? HIS A 39 ? LYS A 45 HIS A 49 5 ? 5 HELX_P HELX_P3 AA3 CYS A 40 ? HIS A 46 ? CYS A 50 HIS A 56 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 8 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 18 A ZN 101 1_555 ? ? ? ? ? ? ? 2.523 ? metalc2 metalc ? ? A CYS 11 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 21 A ZN 101 1_555 ? ? ? ? ? ? ? 2.293 ? metalc3 metalc ? ? A CYS 21 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 31 A ZN 102 1_555 ? ? ? ? ? ? ? 2.418 ? metalc4 metalc ? ? A CYS 24 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 34 A ZN 102 1_555 ? ? ? ? ? ? ? 2.339 ? metalc5 metalc ? ? A CYS 29 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 39 A ZN 101 1_555 ? ? ? ? ? ? ? 2.280 ? metalc6 metalc ? ? A HIS 32 ND1 ? ? ? 1_555 B ZN . ZN ? ? A HIS 42 A ZN 101 1_555 ? ? ? ? ? ? ? 2.167 ? metalc7 metalc ? ? A HIS 38 NE2 ? ? ? 1_555 C ZN . ZN ? ? A HIS 48 A ZN 102 1_555 ? ? ? ? ? ? ? 2.193 ? metalc8 metalc ? ? A CYS 40 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 50 A ZN 102 1_555 ? ? ? ? ? ? ? 2.309 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 6 ? HIS A 7 ? LYS A 16 HIS A 17 AA1 2 LEU A 14 ? ASP A 15 ? LEU A 24 ASP A 25 AA2 1 PHE A 19 ? HIS A 20 ? PHE A 29 HIS A 30 AA2 2 ASP A 27 ? PHE A 28 ? ASP A 37 PHE A 38 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N LYS A 6 ? N LYS A 16 O ASP A 15 ? O ASP A 25 AA2 1 2 N PHE A 19 ? N PHE A 29 O PHE A 28 ? O PHE A 38 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 101 ? 4 'binding site for residue ZN A 101' AC2 Software A ZN 102 ? 4 'binding site for residue ZN A 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 8 ? CYS A 18 . ? 1_555 ? 2 AC1 4 CYS A 11 ? CYS A 21 . ? 1_555 ? 3 AC1 4 CYS A 29 ? CYS A 39 . ? 1_555 ? 4 AC1 4 HIS A 32 ? HIS A 42 . ? 1_555 ? 5 AC2 4 CYS A 21 ? CYS A 31 . ? 1_555 ? 6 AC2 4 CYS A 24 ? CYS A 34 . ? 1_555 ? 7 AC2 4 HIS A 38 ? HIS A 48 . ? 1_555 ? 8 AC2 4 CYS A 40 ? CYS A 50 . ? 1_555 ? # _atom_sites.entry_id 5IJ4 _atom_sites.fract_transf_matrix[1][1] 0.001000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.001000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.001000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 11 11 MET MET A . n A 1 2 LEU 2 12 12 LEU LEU A . n A 1 3 ASP 3 13 13 ASP ASP A . n A 1 4 VAL 4 14 14 VAL VAL A . n A 1 5 GLY 5 15 15 GLY GLY A . n A 1 6 LYS 6 16 16 LYS LYS A . n A 1 7 HIS 7 17 17 HIS HIS A . n A 1 8 CYS 8 18 18 CYS CYS A . n A 1 9 ALA 9 19 19 ALA ALA A . n A 1 10 TYR 10 20 20 TYR TYR A . n A 1 11 CYS 11 21 21 CYS CYS A . n A 1 12 ARG 12 22 22 ARG ARG A . n A 1 13 GLN 13 23 23 GLN GLN A . n A 1 14 LEU 14 24 24 LEU LEU A . n A 1 15 ASP 15 25 25 ASP ASP A . n A 1 16 PHE 16 26 26 PHE PHE A . n A 1 17 LEU 17 27 27 LEU LEU A . n A 1 18 PRO 18 28 28 PRO PRO A . n A 1 19 PHE 19 29 29 PHE PHE A . n A 1 20 HIS 20 30 30 HIS HIS A . n A 1 21 CYS 21 31 31 CYS CYS A . n A 1 22 SER 22 32 32 SER SER A . n A 1 23 PHE 23 33 33 PHE PHE A . n A 1 24 CYS 24 34 34 CYS CYS A . n A 1 25 ASN 25 35 35 ASN ASN A . n A 1 26 GLU 26 36 36 GLU GLU A . n A 1 27 ASP 27 37 37 ASP ASP A . n A 1 28 PHE 28 38 38 PHE PHE A . n A 1 29 CYS 29 39 39 CYS CYS A . n A 1 30 SER 30 40 40 SER SER A . n A 1 31 ASN 31 41 41 ASN ASN A . n A 1 32 HIS 32 42 42 HIS HIS A . n A 1 33 ARG 33 43 43 ARG ARG A . n A 1 34 LEU 34 44 44 LEU LEU A . n A 1 35 LYS 35 45 45 LYS LYS A . n A 1 36 GLU 36 46 46 GLU GLU A . n A 1 37 ASP 37 47 47 ASP ASP A . n A 1 38 HIS 38 48 48 HIS HIS A . n A 1 39 HIS 39 49 49 HIS HIS A . n A 1 40 CYS 40 50 50 CYS CYS A . n A 1 41 ARG 41 51 51 ARG ARG A . n A 1 42 TRP 42 52 52 TRP TRP A . n A 1 43 LEU 43 53 53 LEU LEU A . n A 1 44 LEU 44 54 54 LEU LEU A . n A 1 45 GLU 45 55 55 GLU GLU A . n A 1 46 HIS 46 56 56 HIS HIS A . n A 1 47 GLU 47 57 57 GLU GLU A . n A 1 48 GLU 48 58 58 GLU GLU A . n A 1 49 VAL 49 59 59 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 101 101 ZN ZN A . C 2 ZN 1 102 201 ZN ZN A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 8 ? A CYS 18 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 SG ? A CYS 11 ? A CYS 21 ? 1_555 105.8 ? 2 SG ? A CYS 8 ? A CYS 18 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 SG ? A CYS 29 ? A CYS 39 ? 1_555 112.4 ? 3 SG ? A CYS 11 ? A CYS 21 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 SG ? A CYS 29 ? A CYS 39 ? 1_555 121.1 ? 4 SG ? A CYS 8 ? A CYS 18 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 ND1 ? A HIS 32 ? A HIS 42 ? 1_555 100.6 ? 5 SG ? A CYS 11 ? A CYS 21 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 ND1 ? A HIS 32 ? A HIS 42 ? 1_555 110.9 ? 6 SG ? A CYS 29 ? A CYS 39 ? 1_555 ZN ? B ZN . ? A ZN 101 ? 1_555 ND1 ? A HIS 32 ? A HIS 42 ? 1_555 104.2 ? 7 SG ? A CYS 21 ? A CYS 31 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 SG ? A CYS 24 ? A CYS 34 ? 1_555 111.9 ? 8 SG ? A CYS 21 ? A CYS 31 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 NE2 ? A HIS 38 ? A HIS 48 ? 1_555 100.0 ? 9 SG ? A CYS 24 ? A CYS 34 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 NE2 ? A HIS 38 ? A HIS 48 ? 1_555 102.9 ? 10 SG ? A CYS 21 ? A CYS 31 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 SG ? A CYS 40 ? A CYS 50 ? 1_555 116.1 ? 11 SG ? A CYS 24 ? A CYS 34 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 SG ? A CYS 40 ? A CYS 50 ? 1_555 119.7 ? 12 NE2 ? A HIS 38 ? A HIS 48 ? 1_555 ZN ? C ZN . ? A ZN 102 ? 1_555 SG ? A CYS 40 ? A CYS 50 ? 1_555 102.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-10-05 2 'Structure model' 1 1 2017-09-20 3 'Structure model' 1 2 2019-12-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' entity 2 2 'Structure model' pdbx_audit_support 3 3 'Structure model' pdbx_audit_support 4 3 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_entity.pdbx_number_of_molecules' 2 2 'Structure model' '_pdbx_audit_support.funding_organization' 3 3 'Structure model' '_pdbx_audit_support.funding_organization' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 cuz1 1.0 ? mM '[U-100% 15N]' 1 Tris 5 ? mM 'natural abundance' 1 NaCl 50 ? mM 'natural abundance' 1 ZnCl2 0.2 ? mM 'natural abundance' 1 DTT 1 ? mM 'natural abundance' 2 cuz1 0.7 ? mM '[U-100% 13C; U-100% 15N]' 2 Tris 5 ? mM 'natural abundance' 2 NaCl 50 ? mM 'natural abundance' 2 ZnCl2 0.2 ? mM 'natural abundance' 2 DTT 1 ? mM 'natural abundance' 3 cuz1 0.85 ? mM 'natural abundance' 3 Tris 5 ? mM '[U-2H]' 3 NaCl 50 ? mM 'natural abundance' 3 ZnCl2 0.2 ? mM 'natural abundance' 3 DTT 1 ? mM '[U-2H]' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 20 ? ? -131.04 -40.20 2 1 ARG A 22 ? ? 62.52 66.49 3 1 ASN A 35 ? ? 67.54 60.28 4 2 ASP A 13 ? ? 60.23 96.05 5 2 TYR A 20 ? ? -131.35 -41.33 6 2 ARG A 22 ? ? 66.65 63.99 7 2 ASN A 35 ? ? 67.25 60.26 8 2 CYS A 39 ? ? -49.90 159.62 9 3 TYR A 20 ? ? -130.92 -40.02 10 3 ARG A 22 ? ? 62.93 66.10 11 3 ASN A 35 ? ? 67.68 60.34 12 3 HIS A 56 ? ? -110.28 61.56 13 3 GLU A 58 ? ? 53.25 -172.29 14 4 ASP A 13 ? ? -97.14 40.78 15 4 TYR A 20 ? ? -131.00 -40.18 16 4 ARG A 22 ? ? 62.40 66.43 17 4 ASN A 35 ? ? 67.24 60.24 18 4 CYS A 39 ? ? -49.97 159.20 19 5 TYR A 20 ? ? -131.16 -43.51 20 5 ARG A 22 ? ? 63.43 66.14 21 5 ASN A 35 ? ? 67.01 60.02 22 5 HIS A 56 ? ? -108.03 74.06 23 6 LEU A 12 ? ? -125.73 -165.44 24 6 ASP A 13 ? ? -109.25 44.20 25 6 TYR A 20 ? ? -131.27 -44.58 26 6 ARG A 22 ? ? 66.05 68.50 27 6 ASN A 35 ? ? 67.28 60.18 28 7 LEU A 12 ? ? -125.33 -165.49 29 7 TYR A 20 ? ? -130.95 -40.05 30 7 ARG A 22 ? ? 62.25 66.77 31 7 ASN A 35 ? ? 67.48 60.37 32 7 CYS A 39 ? ? -49.89 159.37 33 7 GLU A 58 ? ? -58.88 176.61 34 8 ASP A 13 ? ? -165.91 100.58 35 8 TYR A 20 ? ? -130.93 -45.33 36 8 ARG A 22 ? ? 61.52 70.39 37 8 ASN A 35 ? ? 67.70 60.35 38 9 ASP A 13 ? ? -101.89 64.19 39 9 TYR A 20 ? ? -131.05 -40.13 40 9 ARG A 22 ? ? 62.58 66.23 41 9 ASN A 35 ? ? 67.91 60.38 42 9 GLU A 58 ? ? -55.30 174.41 43 10 TYR A 20 ? ? -130.93 -40.22 44 10 ARG A 22 ? ? 63.59 65.91 45 10 ASN A 35 ? ? 67.36 60.21 46 10 CYS A 39 ? ? -50.00 159.45 47 10 GLU A 57 ? ? -108.02 78.35 48 11 TYR A 20 ? ? -131.15 -46.71 49 11 ARG A 22 ? ? 63.98 69.21 50 11 ASN A 35 ? ? 67.62 60.35 51 11 CYS A 39 ? ? -49.89 158.10 52 11 HIS A 56 ? ? -99.46 58.34 53 12 TYR A 20 ? ? -130.82 -40.76 54 12 ARG A 22 ? ? 60.31 66.75 55 12 ASN A 35 ? ? 67.36 60.16 56 13 ASP A 13 ? ? 58.95 91.96 57 13 TYR A 20 ? ? -131.00 -40.09 58 13 ARG A 22 ? ? 62.40 66.61 59 13 ASN A 35 ? ? 67.46 60.25 60 13 CYS A 39 ? ? -49.99 159.72 61 13 HIS A 56 ? ? -110.80 61.97 62 13 GLU A 58 ? ? -110.22 55.58 63 14 TYR A 20 ? ? -131.74 -39.08 64 14 ARG A 22 ? ? 46.87 73.57 65 15 TYR A 20 ? ? -130.71 -48.19 66 15 ARG A 22 ? ? 54.90 70.81 67 15 LEU A 24 ? ? -59.92 104.85 68 15 ASN A 35 ? ? 67.55 60.30 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/Office of the Director' 'United States' 5DP5-OD019800 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' PO1-GM047467 2 'National Institutes of Health/National Institute of Biomedical Imaging and Bioengineering (NIH/NIBIB)' 'United States' PO1-EB002026 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #