HEADER LYASE 03-MAR-16 5IK9 TITLE TOBACCO 5-EPI-ARISTOLOCHENE WITH FARNESYL MONOPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-EPI-ARISTOLOCHENE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EAS; COMPND 5 EC: 4.2.3.61; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: COMMON TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 GENE: EAS3, EAS4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) KEYWDS TERPENE SYNTHASE, TEAS, FMP, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.KOO,Y.XU,G.V.LOUIE,M.BOWMAN,J.P.NOEL REVDAT 2 27-SEP-23 5IK9 1 JRNL REMARK LINK REVDAT 1 05-OCT-16 5IK9 0 JRNL AUTH H.J.KOO,C.R.VICKERY,Y.XU,G.V.LOUIE,P.E.O'MAILLE,M.BOWMAN, JRNL AUTH 2 C.M.NARTEY,M.D.BURKART,J.P.NOEL JRNL TITL BIOSYNTHETIC POTENTIAL OF SESQUITERPENE SYNTHASES: PRODUCT JRNL TITL 2 PROFILES OF EGYPTIAN HENBANE PREMNASPIRODIENE SYNTHASE AND JRNL TITL 3 RELATED MUTANTS. JRNL REF J.ANTIBIOT. V. 69 524 2016 JRNL REFN ISSN 0021-8820 JRNL PMID 27328867 JRNL DOI 10.1038/JA.2016.68 REMARK 2 REMARK 2 RESOLUTION. 2.23 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.23 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 56.55 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 49342 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2466 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 56.5638 - 5.8422 1.00 2838 142 0.1402 0.1757 REMARK 3 2 5.8422 - 4.6378 1.00 2654 158 0.1396 0.1987 REMARK 3 3 4.6378 - 4.0518 1.00 2656 133 0.1268 0.1482 REMARK 3 4 4.0518 - 3.6814 1.00 2624 134 0.1354 0.1577 REMARK 3 5 3.6814 - 3.4176 1.00 2610 148 0.1525 0.2010 REMARK 3 6 3.4176 - 3.2161 1.00 2607 121 0.1689 0.1924 REMARK 3 7 3.2161 - 3.0550 1.00 2614 123 0.1655 0.2025 REMARK 3 8 3.0550 - 2.9221 1.00 2598 139 0.1612 0.1825 REMARK 3 9 2.9221 - 2.8096 1.00 2545 155 0.1641 0.1813 REMARK 3 10 2.8096 - 2.7126 1.00 2592 125 0.1666 0.2047 REMARK 3 11 2.7126 - 2.6278 1.00 2580 128 0.1680 0.2116 REMARK 3 12 2.6278 - 2.5527 1.00 2577 136 0.1722 0.1925 REMARK 3 13 2.5527 - 2.4855 1.00 2565 133 0.1690 0.2159 REMARK 3 14 2.4855 - 2.4248 1.00 2548 146 0.1665 0.1927 REMARK 3 15 2.4248 - 2.3697 1.00 2585 140 0.1725 0.2287 REMARK 3 16 2.3697 - 2.3193 1.00 2553 129 0.1684 0.2185 REMARK 3 17 2.3193 - 2.2729 1.00 2571 138 0.1839 0.2284 REMARK 3 18 2.2729 - 2.2300 1.00 2559 138 0.1995 0.2399 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4532 REMARK 3 ANGLE : 0.970 6129 REMARK 3 CHIRALITY : 0.037 686 REMARK 3 PLANARITY : 0.004 780 REMARK 3 DIHEDRAL : 14.231 1674 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.8569 55.5855 23.8586 REMARK 3 T TENSOR REMARK 3 T11: 0.3656 T22: 0.2445 REMARK 3 T33: 0.2177 T12: -0.0300 REMARK 3 T13: 0.0102 T23: -0.0135 REMARK 3 L TENSOR REMARK 3 L11: 0.9248 L22: 3.3519 REMARK 3 L33: 1.0905 L12: 0.1672 REMARK 3 L13: -0.2122 L23: 0.3359 REMARK 3 S TENSOR REMARK 3 S11: 0.0105 S12: -0.2203 S13: -0.0954 REMARK 3 S21: 0.2937 S22: 0.0120 S23: 0.4402 REMARK 3 S31: 0.0716 S32: -0.1393 S33: -0.0473 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.6036 63.8205 16.3283 REMARK 3 T TENSOR REMARK 3 T11: 0.2301 T22: 0.2673 REMARK 3 T33: 0.2298 T12: 0.0063 REMARK 3 T13: -0.0573 T23: -0.0573 REMARK 3 L TENSOR REMARK 3 L11: 6.4012 L22: 3.7447 REMARK 3 L33: 7.7611 L12: -0.2937 REMARK 3 L13: -3.8776 L23: 3.4835 REMARK 3 S TENSOR REMARK 3 S11: -0.0351 S12: -0.1517 S13: 0.0285 REMARK 3 S21: -0.0404 S22: 0.3857 S23: -0.4620 REMARK 3 S31: -0.0960 S32: 0.8193 S33: -0.2807 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.5397 59.7198 9.3772 REMARK 3 T TENSOR REMARK 3 T11: 0.2202 T22: 0.2341 REMARK 3 T33: 0.1396 T12: -0.0143 REMARK 3 T13: -0.0123 T23: -0.0310 REMARK 3 L TENSOR REMARK 3 L11: 2.6339 L22: 1.8492 REMARK 3 L33: 2.3363 L12: -0.1685 REMARK 3 L13: -0.8200 L23: 0.5902 REMARK 3 S TENSOR REMARK 3 S11: -0.0649 S12: 0.2285 S13: -0.0588 REMARK 3 S21: -0.2234 S22: 0.0428 S23: -0.0968 REMARK 3 S31: -0.0281 S32: 0.1057 S33: 0.0310 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 280 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.7612 62.9873 19.7079 REMARK 3 T TENSOR REMARK 3 T11: 0.2593 T22: 0.2740 REMARK 3 T33: 0.4922 T12: -0.0554 REMARK 3 T13: 0.0066 T23: -0.0598 REMARK 3 L TENSOR REMARK 3 L11: 3.9630 L22: 3.0019 REMARK 3 L33: 0.9740 L12: -1.1576 REMARK 3 L13: 0.4686 L23: 0.6458 REMARK 3 S TENSOR REMARK 3 S11: -0.0809 S12: -0.0830 S13: 0.0789 REMARK 3 S21: -0.0481 S22: -0.0843 S23: 1.0832 REMARK 3 S31: -0.0399 S32: -0.2610 S33: 0.1210 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 281 THROUGH 454 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9557 83.4861 22.8080 REMARK 3 T TENSOR REMARK 3 T11: 0.2644 T22: 0.2489 REMARK 3 T33: 0.5756 T12: 0.0330 REMARK 3 T13: -0.0229 T23: -0.1077 REMARK 3 L TENSOR REMARK 3 L11: 1.8415 L22: 3.4182 REMARK 3 L33: 1.2889 L12: 0.1977 REMARK 3 L13: -0.1767 L23: -0.3247 REMARK 3 S TENSOR REMARK 3 S11: -0.0387 S12: -0.1616 S13: 0.4079 REMARK 3 S21: 0.0267 S22: -0.0263 S23: 0.9931 REMARK 3 S31: -0.1309 S32: -0.2502 S33: 0.0331 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 455 THROUGH 495 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7774 85.8334 7.9510 REMARK 3 T TENSOR REMARK 3 T11: 0.4935 T22: 0.2450 REMARK 3 T33: 0.2753 T12: 0.0053 REMARK 3 T13: -0.0552 T23: -0.0015 REMARK 3 L TENSOR REMARK 3 L11: 2.8105 L22: 4.9573 REMARK 3 L33: 4.5622 L12: -1.4556 REMARK 3 L13: 1.1612 L23: -2.3012 REMARK 3 S TENSOR REMARK 3 S11: 0.0347 S12: 0.4498 S13: 0.4241 REMARK 3 S21: -0.8253 S22: -0.2047 S23: 0.0958 REMARK 3 S31: -0.3055 S32: 0.0024 S33: 0.1897 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 496 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.5875 67.6959 15.1405 REMARK 3 T TENSOR REMARK 3 T11: 0.2949 T22: 0.2268 REMARK 3 T33: 0.2633 T12: 0.0296 REMARK 3 T13: -0.0320 T23: -0.0436 REMARK 3 L TENSOR REMARK 3 L11: 3.4563 L22: 4.5324 REMARK 3 L33: 2.6151 L12: 1.8035 REMARK 3 L13: 1.2130 L23: 1.4098 REMARK 3 S TENSOR REMARK 3 S11: -0.2360 S12: 0.3334 S13: 0.0853 REMARK 3 S21: -0.6187 S22: 0.1140 S23: 0.5470 REMARK 3 S31: -0.2295 S32: -0.0334 S33: 0.1162 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IK9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000218948. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49350 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.230 REMARK 200 RESOLUTION RANGE LOW (A) : 56.550 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.500 REMARK 200 R MERGE (I) : 0.10540 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.23 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : 0.53200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.290 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5IM1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MOPSO, PH 7, 300 MM MG ACETATE, REMARK 280 15% PEG 8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.76500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 63.22000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 63.22000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.88250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 63.22000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 63.22000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 92.64750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 63.22000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.22000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.88250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 63.22000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.22000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 92.64750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.76500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 985 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 996 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1007 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 ALA A 7 REMARK 465 ASN A 8 REMARK 465 TYR A 9 REMARK 465 GLU A 10 REMARK 465 GLU A 11 REMARK 465 GLU A 12 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH TYR A 527 CAQ FJP A 604 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 101 30.11 -153.27 REMARK 500 ILE A 214 -71.46 -111.06 REMARK 500 ALA A 306 21.49 -145.99 REMARK 500 TYR A 307 -57.01 -154.84 REMARK 500 ASN A 523 46.87 72.18 REMARK 500 THR A 528 -28.81 75.46 REMARK 500 LYS A 532 -70.22 -65.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 301 OD1 REMARK 620 2 ASP A 305 OD2 89.8 REMARK 620 3 FJP A 604 OAG 89.3 74.7 REMARK 620 4 HOH A 709 O 172.0 83.1 85.3 REMARK 620 5 HOH A 803 O 82.8 102.7 171.7 102.4 REMARK 620 6 HOH A 844 O 101.0 160.7 89.3 84.9 94.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 301 OD2 REMARK 620 2 ASP A 305 OD2 87.5 REMARK 620 3 FJP A 604 OAG 96.9 74.6 REMARK 620 4 HOH A 779 O 95.7 168.4 93.9 REMARK 620 5 HOH A 823 O 85.6 99.3 173.2 92.1 REMARK 620 6 HOH A 888 O 169.7 89.4 91.7 89.3 85.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 601 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 444 OD1 REMARK 620 2 THR A 448 OG1 88.2 REMARK 620 3 GLU A 452 OE2 163.5 77.6 REMARK 620 4 HOH A 702 O 89.8 164.0 101.6 REMARK 620 5 HOH A 728 O 96.4 104.2 95.2 91.8 REMARK 620 6 HOH A 747 O 79.1 73.4 88.7 90.6 174.9 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FJP A 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IK0 RELATED DB: PDB REMARK 900 RELATED ID: 5IK6 RELATED DB: PDB REMARK 900 RELATED ID: 5IKA RELATED DB: PDB REMARK 900 RELATED ID: 5IKH RELATED DB: PDB REMARK 900 RELATED ID: 5IL3 RELATED DB: PDB REMARK 900 RELATED ID: 5IL8 RELATED DB: PDB REMARK 900 RELATED ID: 5ILD RELATED DB: PDB REMARK 900 RELATED ID: 5ILH RELATED DB: PDB REMARK 900 RELATED ID: 5ILI RELATED DB: PDB REMARK 900 RELATED ID: 5ILJ RELATED DB: PDB REMARK 900 RELATED ID: 5ILK RELATED DB: PDB REMARK 900 RELATED ID: 5ILY RELATED DB: PDB REMARK 900 RELATED ID: 5ILZ RELATED DB: PDB REMARK 900 RELATED ID: 5IM1 RELATED DB: PDB DBREF 5IK9 A 1 548 UNP Q40577 5EAS_TOBAC 1 548 SEQADV 5IK9 GLY A -1 UNP Q40577 EXPRESSION TAG SEQADV 5IK9 SER A 0 UNP Q40577 EXPRESSION TAG SEQRES 1 A 550 GLY SER MET ALA SER ALA ALA VAL ALA ASN TYR GLU GLU SEQRES 2 A 550 GLU ILE VAL ARG PRO VAL ALA ASP PHE SER PRO SER LEU SEQRES 3 A 550 TRP GLY ASP GLN PHE LEU SER PHE SER ILE LYS ASN GLN SEQRES 4 A 550 VAL ALA GLU LYS TYR ALA LYS GLU ILE GLU ALA LEU LYS SEQRES 5 A 550 GLU GLN THR ARG ASN MET LEU LEU ALA THR GLY MET LYS SEQRES 6 A 550 LEU ALA ASP THR LEU ASN LEU ILE ASP THR ILE GLU ARG SEQRES 7 A 550 LEU GLY ILE SER TYR HIS PHE GLU LYS GLU ILE ASP ASP SEQRES 8 A 550 ILE LEU ASP GLN ILE TYR ASN GLN ASN SER ASN CYS ASN SEQRES 9 A 550 ASP LEU CYS THR SER ALA LEU GLN PHE ARG LEU LEU ARG SEQRES 10 A 550 GLN HIS GLY PHE ASN ILE SER PRO GLU ILE PHE SER LYS SEQRES 11 A 550 PHE GLN ASP GLU ASN GLY LYS PHE LYS GLU SER LEU ALA SEQRES 12 A 550 SER ASP VAL LEU GLY LEU LEU ASN LEU TYR GLU ALA SER SEQRES 13 A 550 HIS VAL ARG THR HIS ALA ASP ASP ILE LEU GLU ASP ALA SEQRES 14 A 550 LEU ALA PHE SER THR ILE HIS LEU GLU SER ALA ALA PRO SEQRES 15 A 550 HIS LEU LYS SER PRO LEU ARG GLU GLN VAL THR HIS ALA SEQRES 16 A 550 LEU GLU GLN CYS LEU HIS LYS GLY VAL PRO ARG VAL GLU SEQRES 17 A 550 THR ARG PHE PHE ILE SER SER ILE TYR ASP LYS GLU GLN SEQRES 18 A 550 SER LYS ASN ASN VAL LEU LEU ARG PHE ALA LYS LEU ASP SEQRES 19 A 550 PHE ASN LEU LEU GLN MET LEU HIS LYS GLN GLU LEU ALA SEQRES 20 A 550 GLN VAL SER ARG TRP TRP LYS ASP LEU ASP PHE VAL THR SEQRES 21 A 550 THR LEU PRO TYR ALA ARG ASP ARG VAL VAL GLU CYS TYR SEQRES 22 A 550 PHE TRP ALA LEU GLY VAL TYR PHE GLU PRO GLN TYR SER SEQRES 23 A 550 GLN ALA ARG VAL MET LEU VAL LYS THR ILE SER MET ILE SEQRES 24 A 550 SER ILE VAL ASP ASP THR PHE ASP ALA TYR GLY THR VAL SEQRES 25 A 550 LYS GLU LEU GLU ALA TYR THR ASP ALA ILE GLN ARG TRP SEQRES 26 A 550 ASP ILE ASN GLU ILE ASP ARG LEU PRO ASP TYR MET LYS SEQRES 27 A 550 ILE SER TYR LYS ALA ILE LEU ASP LEU TYR LYS ASP TYR SEQRES 28 A 550 GLU LYS GLU LEU SER SER ALA GLY ARG SER HIS ILE VAL SEQRES 29 A 550 CYS HIS ALA ILE GLU ARG MET LYS GLU VAL VAL ARG ASN SEQRES 30 A 550 TYR ASN VAL GLU SER THR TRP PHE ILE GLU GLY TYR THR SEQRES 31 A 550 PRO PRO VAL SER GLU TYR LEU SER ASN ALA LEU ALA THR SEQRES 32 A 550 THR THR TYR TYR TYR LEU ALA THR THR SER TYR LEU GLY SEQRES 33 A 550 MET LYS SER ALA THR GLU GLN ASP PHE GLU TRP LEU SER SEQRES 34 A 550 LYS ASN PRO LYS ILE LEU GLU ALA SER VAL ILE ILE CYS SEQRES 35 A 550 ARG VAL ILE ASP ASP THR ALA THR TYR GLU VAL GLU LYS SEQRES 36 A 550 SER ARG GLY GLN ILE ALA THR GLY ILE GLU CYS CYS MET SEQRES 37 A 550 ARG ASP TYR GLY ILE SER THR LYS GLU ALA MET ALA LYS SEQRES 38 A 550 PHE GLN ASN MET ALA GLU THR ALA TRP LYS ASP ILE ASN SEQRES 39 A 550 GLU GLY LEU LEU ARG PRO THR PRO VAL SER THR GLU PHE SEQRES 40 A 550 LEU THR PRO ILE LEU ASN LEU ALA ARG ILE VAL GLU VAL SEQRES 41 A 550 THR TYR ILE HIS ASN LEU ASP GLY TYR THR HIS PRO GLU SEQRES 42 A 550 LYS VAL LEU LYS PRO HIS ILE ILE ASN LEU LEU VAL ASP SEQRES 43 A 550 SER ILE LYS ILE HET MG A 601 1 HET MG A 602 1 HET MG A 603 1 HET FJP A 604 20 HETNAM MG MAGNESIUM ION HETNAM FJP (2E,6Z)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIEN-1-YL HETNAM 2 FJP DIHYDROGEN PHOSPHATE FORMUL 2 MG 3(MG 2+) FORMUL 5 FJP C15 H27 O4 P FORMUL 6 HOH *313(H2 O) HELIX 1 AA1 LYS A 35 LEU A 58 1 24 HELIX 2 AA2 LYS A 63 LEU A 77 1 15 HELIX 3 AA3 ILE A 79 HIS A 82 5 4 HELIX 4 AA4 PHE A 83 ASN A 98 1 16 HELIX 5 AA5 ASP A 103 HIS A 117 1 15 HELIX 6 AA6 SER A 122 GLN A 130 5 9 HELIX 7 AA7 LYS A 137 SER A 142 5 6 HELIX 8 AA8 ASP A 143 SER A 154 1 12 HELIX 9 AA9 HIS A 155 ARG A 157 5 3 HELIX 10 AB1 ASP A 161 GLU A 165 5 5 HELIX 11 AB2 ASP A 166 ALA A 179 1 14 HELIX 12 AB3 PRO A 180 LEU A 182 5 3 HELIX 13 AB4 PRO A 185 GLN A 196 1 12 HELIX 14 AB5 VAL A 202 ILE A 214 1 13 HELIX 15 AB6 TYR A 215 GLU A 218 5 4 HELIX 16 AB7 ASN A 222 ASP A 253 1 32 HELIX 17 AB8 ASP A 255 LEU A 260 1 6 HELIX 18 AB9 ARG A 266 TYR A 278 1 13 HELIX 19 AC1 GLU A 280 GLN A 282 5 3 HELIX 20 AC2 TYR A 283 TYR A 307 1 25 HELIX 21 AC3 THR A 309 TRP A 323 1 15 HELIX 22 AC4 ASP A 324 LEU A 331 5 8 HELIX 23 AC5 PRO A 332 LEU A 353 1 22 HELIX 24 AC6 ARG A 358 HIS A 360 5 3 HELIX 25 AC7 ILE A 361 GLY A 386 1 26 HELIX 26 AC8 PRO A 390 LEU A 399 1 10 HELIX 27 AC9 ALA A 400 THR A 402 5 3 HELIX 28 AD1 THR A 403 LEU A 413 1 11 HELIX 29 AD2 THR A 419 LYS A 428 1 10 HELIX 30 AD3 PRO A 430 ARG A 455 1 26 HELIX 31 AD4 THR A 460 GLY A 470 1 11 HELIX 32 AD5 SER A 472 LEU A 495 1 24 HELIX 33 AD6 SER A 502 PHE A 505 5 4 HELIX 34 AD7 LEU A 506 TYR A 520 1 15 HELIX 35 AD8 ILE A 521 LEU A 524 5 4 HELIX 36 AD9 VAL A 533 VAL A 543 1 11 LINK OH BTYR A 527 CAB FJP A 604 1555 1555 1.38 LINK OD1 ASP A 301 MG MG A 602 1555 1555 2.07 LINK OD2 ASP A 301 MG MG A 603 1555 1555 2.07 LINK OD2 ASP A 305 MG MG A 602 1555 1555 2.08 LINK OD2 ASP A 305 MG MG A 603 1555 1555 2.07 LINK OD1 ASP A 444 MG MG A 601 1555 1555 2.28 LINK OG1 THR A 448 MG MG A 601 1555 1555 2.29 LINK OE2 GLU A 452 MG MG A 601 1555 1555 2.07 LINK MG MG A 601 O HOH A 702 1555 1555 2.06 LINK MG MG A 601 O HOH A 728 1555 1555 2.07 LINK MG MG A 601 O HOH A 747 1555 1555 2.08 LINK MG MG A 602 OAG FJP A 604 1555 1555 2.09 LINK MG MG A 602 O HOH A 709 1555 1555 2.07 LINK MG MG A 602 O HOH A 803 1555 1555 2.07 LINK MG MG A 602 O HOH A 844 1555 1555 2.08 LINK MG MG A 603 OAG FJP A 604 1555 1555 2.10 LINK MG MG A 603 O HOH A 779 1555 1555 2.07 LINK MG MG A 603 O HOH A 823 1555 1555 2.07 LINK MG MG A 603 O HOH A 888 1555 1555 2.07 CISPEP 1 SER A 184 PRO A 185 0 3.61 CISPEP 2 ARG A 497 PRO A 498 0 -6.18 SITE 1 AC1 6 ASP A 444 THR A 448 GLU A 452 HOH A 702 SITE 2 AC1 6 HOH A 728 HOH A 747 SITE 1 AC2 7 ASP A 301 ASP A 305 MG A 603 FJP A 604 SITE 2 AC2 7 HOH A 709 HOH A 803 HOH A 844 SITE 1 AC3 7 ASP A 301 ASP A 305 MG A 602 FJP A 604 SITE 2 AC3 7 HOH A 779 HOH A 823 HOH A 888 SITE 1 AC4 18 ARG A 264 TRP A 273 ASP A 301 ASP A 305 SITE 2 AC4 18 THR A 402 LEU A 407 CYS A 440 ASP A 444 SITE 3 AC4 18 TYR A 527 MG A 602 MG A 603 HOH A 702 SITE 4 AC4 18 HOH A 707 HOH A 709 HOH A 728 HOH A 779 SITE 5 AC4 18 HOH A 844 HOH A 888 CRYST1 126.440 126.440 123.530 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007909 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007909 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008095 0.00000