HEADER TRANSCRIPTION 03-MAR-16 5IKF TITLE CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF THE MIT1 NUCLEOSOME TITLE 2 REMODELER IN COMPLEX WITH CLR1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHROMATIN REMODELING FACTOR MIT1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1156-1417; COMPND 5 SYNONYM: MI2-LIKE INTERACTING WITH CLR3 PROTEIN 1,SNF2/HDAC- COMPND 6 CONTAINING REPRESSOR COMPLEX PROTEIN MIT1,SHREC PROTEIN MIT1; COMPND 7 EC: 3.6.4.-; COMPND 8 ENGINEERED: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: CRYPTIC LOCI REGULATOR PROTEIN 1; COMPND 11 CHAIN: B; COMPND 12 FRAGMENT: UNP RESIDUES 357-500; COMPND 13 ENGINEERED: YES; COMPND 14 OTHER_DETAILS: T7 TAGGED FRAGMENT OF CLR1 CONTAINING RESIDUES 353-500 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE (STRAIN 972 / ATCC SOURCE 3 24843); SOURCE 4 ORGANISM_COMMON: FISSION YEAST; SOURCE 5 ORGANISM_TAXID: 284812; SOURCE 6 STRAIN: 972 / ATCC 24843; SOURCE 7 GENE: MIT1, SPBP35G2.10; SOURCE 8 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 9 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 10 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 11 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 12 EXPRESSION_SYSTEM_VECTOR_TYPE: PACEBAC1XPIDK MULTIBAC; SOURCE 13 EXPRESSION_SYSTEM_PLASMID: P5395; SOURCE 14 MOL_ID: 2; SOURCE 15 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; SOURCE 16 ORGANISM_COMMON: FISSION YEAST; SOURCE 17 ORGANISM_TAXID: 284812; SOURCE 18 STRAIN: 972 / ATCC 24843; SOURCE 19 GENE: CLR1, SPBC2D10.17; SOURCE 20 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 21 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 22 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 23 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 24 EXPRESSION_SYSTEM_PLASMID: P5394 KEYWDS ZINC FINGERS, ALPHA-HELICAL, PROTEIN-PROTEIN INTERFACE, COMPLEX, KEYWDS 2 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.BRUGGER,T.SCHALCH REVDAT 3 08-MAY-24 5IKF 1 REMARK REVDAT 2 04-MAY-16 5IKF 1 JRNL REVDAT 1 20-APR-16 5IKF 0 JRNL AUTH G.JOB,C.BRUGGER,T.XU,B.R.LOWE,Y.PFISTER,C.QU,S.SHANKER, JRNL AUTH 2 J.I.BANOS SANZ,J.F.PARTRIDGE,T.SCHALCH JRNL TITL SHREC SILENCES HETEROCHROMATIN VIA DISTINCT REMODELING AND JRNL TITL 2 DEACETYLATION MODULES. JRNL REF MOL.CELL V. 62 207 2016 JRNL REFN ISSN 1097-2765 JRNL PMID 27105116 JRNL DOI 10.1016/J.MOLCEL.2016.03.016 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2152: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.22 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.280 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 10217 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1983 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.2232 - 6.7420 1.00 1256 140 0.1754 0.2214 REMARK 3 2 6.7420 - 5.3539 1.00 1251 146 0.1945 0.2387 REMARK 3 3 5.3539 - 4.6778 1.00 1300 150 0.1782 0.2519 REMARK 3 4 4.6778 - 4.2505 1.00 1229 139 0.1704 0.1888 REMARK 3 5 4.2505 - 3.9460 1.00 1263 141 0.1634 0.2186 REMARK 3 6 3.9460 - 3.7134 1.00 1260 145 0.1808 0.2170 REMARK 3 7 3.7134 - 3.5275 1.00 1273 144 0.1972 0.2329 REMARK 3 8 3.5275 - 3.3740 1.00 1268 138 0.2329 0.3007 REMARK 3 9 3.3740 - 3.2442 1.00 1260 136 0.2411 0.2970 REMARK 3 10 3.2442 - 3.1323 1.00 1283 140 0.2417 0.2938 REMARK 3 11 3.1323 - 3.0343 1.00 1252 139 0.2377 0.3228 REMARK 3 12 3.0343 - 2.9476 1.00 1232 139 0.2535 0.3082 REMARK 3 13 2.9476 - 2.8700 1.00 1267 142 0.2889 0.2775 REMARK 3 14 2.8700 - 2.8000 1.00 1279 144 0.2955 0.3036 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2321 REMARK 3 ANGLE : 0.449 3118 REMARK 3 CHIRALITY : 0.036 356 REMARK 3 PLANARITY : 0.003 400 REMARK 3 DIHEDRAL : 11.746 1450 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IKF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000218960. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00004 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10218 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 47.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.37700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M SODIUM BROMIDE, 0.1 M BIS-TRIS REMARK 280 PROPANE PH 7.5, 20% W/V PEG 3350., VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 52.84000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.42500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 52.84000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.42500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 TYR A 1156 REMARK 465 ASP A 1157 REMARK 465 ASN A 1158 REMARK 465 SER A 1159 REMARK 465 ASP A 1160 REMARK 465 ASP A 1161 REMARK 465 THR A 1162 REMARK 465 ASP A 1163 REMARK 465 TYR A 1164 REMARK 465 THR A 1165 REMARK 465 VAL A 1166 REMARK 465 ASN A 1167 REMARK 465 ASP A 1168 REMARK 465 ARG A 1169 REMARK 465 SER A 1170 REMARK 465 SER A 1171 REMARK 465 PRO A 1172 REMARK 465 GLY A 1173 REMARK 465 SER A 1174 REMARK 465 PRO A 1175 REMARK 465 PHE A 1176 REMARK 465 PRO A 1177 REMARK 465 ILE A 1178 REMARK 465 GLU A 1179 REMARK 465 THR A 1180 REMARK 465 GLU A 1181 REMARK 465 THR A 1182 REMARK 465 ILE A 1183 REMARK 465 SER A 1184 REMARK 465 SER A 1185 REMARK 465 ILE A 1186 REMARK 465 THR A 1187 REMARK 465 ASP A 1188 REMARK 465 THR A 1189 REMARK 465 LEU A 1190 REMARK 465 SER A 1191 REMARK 465 ASP A 1192 REMARK 465 LYS A 1193 REMARK 465 GLN A 1194 REMARK 465 LYS A 1195 REMARK 465 LEU A 1196 REMARK 465 LYS A 1197 REMARK 465 TYR A 1198 REMARK 465 ASP A 1199 REMARK 465 SER A 1200 REMARK 465 SER A 1201 REMARK 465 VAL A 1202 REMARK 465 ASN A 1203 REMARK 465 ILE A 1204 REMARK 465 GLU A 1205 REMARK 465 ASN A 1206 REMARK 465 LEU A 1207 REMARK 465 ASN A 1208 REMARK 465 ASP A 1209 REMARK 465 GLU A 1210 REMARK 465 SER A 1211 REMARK 465 ASP A 1212 REMARK 465 SER A 1213 REMARK 465 GLN A 1214 REMARK 465 LYS A 1215 REMARK 465 SER A 1216 REMARK 465 ALA A 1217 REMARK 465 ASP A 1218 REMARK 465 VAL A 1219 REMARK 465 HIS A 1220 REMARK 465 SER A 1256 REMARK 465 SER A 1257 REMARK 465 GLU A 1258 REMARK 465 TYR A 1259 REMARK 465 ILE A 1260 REMARK 465 ASN A 1261 REMARK 465 ASP A 1262 REMARK 465 SER A 1263 REMARK 465 GLU A 1264 REMARK 465 MET A 1265 REMARK 465 GLN A 1266 REMARK 465 VAL A 1272 REMARK 465 PHE A 1273 REMARK 465 TYR A 1274 REMARK 465 GLN A 1385 REMARK 465 LYS A 1386 REMARK 465 LYS A 1387 REMARK 465 GLU A 1388 REMARK 465 GLU A 1389 REMARK 465 PRO A 1390 REMARK 465 THR A 1391 REMARK 465 VAL A 1392 REMARK 465 SER A 1393 REMARK 465 SER A 1394 REMARK 465 SER A 1395 REMARK 465 ALA A 1396 REMARK 465 LYS A 1397 REMARK 465 THR A 1398 REMARK 465 ASN A 1399 REMARK 465 GLU A 1400 REMARK 465 LEU A 1401 REMARK 465 SER A 1402 REMARK 465 SER A 1403 REMARK 465 LYS A 1404 REMARK 465 VAL A 1405 REMARK 465 ILE A 1406 REMARK 465 ILE A 1407 REMARK 465 LYS A 1408 REMARK 465 GLU A 1409 REMARK 465 SER A 1410 REMARK 465 ILE A 1411 REMARK 465 ILE A 1412 REMARK 465 ASN A 1413 REMARK 465 GLU A 1414 REMARK 465 ALA A 1415 REMARK 465 LYS A 1416 REMARK 465 THR A 1417 REMARK 465 MET B 346 REMARK 465 ALA B 347 REMARK 465 SER B 348 REMARK 465 MET B 349 REMARK 465 THR B 350 REMARK 465 GLY B 351 REMARK 465 GLY B 352 REMARK 465 GLN B 353 REMARK 465 GLN B 354 REMARK 465 MET B 355 REMARK 465 GLY B 356 REMARK 465 ARG B 492 REMARK 465 ASN B 493 REMARK 465 LYS B 494 REMARK 465 HIS B 495 REMARK 465 SER B 496 REMARK 465 GLU B 497 REMARK 465 ILE B 498 REMARK 465 SER B 499 REMARK 465 ALA B 500 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG SER B 429 OE2 GLU B 450 1.53 REMARK 500 OG SER B 429 OE2 GLU B 450 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE1 GLU A 1249 HG SER A 1306 2656 1.57 REMARK 500 OE1 GLU A 1249 OG SER A 1306 2656 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A1276 42.45 -83.44 REMARK 500 PRO B 361 3.34 -67.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1311 SG REMARK 620 2 CYS A1314 SG 98.2 REMARK 620 3 HIS A1318 NE2 93.4 101.1 REMARK 620 4 CYS A1323 SG 124.9 104.7 128.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1333 SG REMARK 620 2 CYS A1336 SG 109.6 REMARK 620 3 HIS A1340 NE2 103.3 108.0 REMARK 620 4 CYS A1347 SG 110.5 110.2 115.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 1504 DBREF 5IKF A 1156 1417 UNP Q9P793 MIT1_SCHPO 1156 1417 DBREF 5IKF B 357 500 UNP O74808 CLR1_SCHPO 357 500 SEQADV 5IKF MET B 346 UNP O74808 EXPRESSION TAG SEQADV 5IKF ALA B 347 UNP O74808 EXPRESSION TAG SEQADV 5IKF SER B 348 UNP O74808 EXPRESSION TAG SEQADV 5IKF MET B 349 UNP O74808 EXPRESSION TAG SEQADV 5IKF THR B 350 UNP O74808 EXPRESSION TAG SEQADV 5IKF GLY B 351 UNP O74808 EXPRESSION TAG SEQADV 5IKF GLY B 352 UNP O74808 EXPRESSION TAG SEQADV 5IKF GLN B 353 UNP O74808 EXPRESSION TAG SEQADV 5IKF GLN B 354 UNP O74808 EXPRESSION TAG SEQADV 5IKF MET B 355 UNP O74808 EXPRESSION TAG SEQADV 5IKF GLY B 356 UNP O74808 EXPRESSION TAG SEQRES 1 A 262 TYR ASP ASN SER ASP ASP THR ASP TYR THR VAL ASN ASP SEQRES 2 A 262 ARG SER SER PRO GLY SER PRO PHE PRO ILE GLU THR GLU SEQRES 3 A 262 THR ILE SER SER ILE THR ASP THR LEU SER ASP LYS GLN SEQRES 4 A 262 LYS LEU LYS TYR ASP SER SER VAL ASN ILE GLU ASN LEU SEQRES 5 A 262 ASN ASP GLU SER ASP SER GLN LYS SER ALA ASP VAL HIS SEQRES 6 A 262 PHE ASP SER ILE LEU ALA LYS SER LEU LEU ALA THR THR SEQRES 7 A 262 PRO LYS GLU ASP GLU PHE ASN LYS THR LEU SER THR ILE SEQRES 8 A 262 ASN LEU GLU VAL ALA ASN LYS LEU THR SER SER GLU TYR SEQRES 9 A 262 ILE ASN ASP SER GLU MET GLN LEU ILE ASP ASP PRO VAL SEQRES 10 A 262 PHE TYR PRO PRO TYR GLU ILE ILE GLU LYS ASN HIS GLN SEQRES 11 A 262 LEU VAL GLY ARG SER LEU SER LYS ALA VAL LEU ASP ASN SEQRES 12 A 262 PHE PHE LEU LEU SER SER LEU SER ASP ASN VAL ARG CYS SEQRES 13 A 262 ARG CYS CYS GLY ILE LYS HIS LEU PRO ALA HIS CYS PRO SEQRES 14 A 262 LEU SER ILE VAL PRO LEU GLU ILE CYS PHE LEU CYS GLY SEQRES 15 A 262 THR PRO HIS PHE SER GLY ARG ASP THR CYS PRO MET LEU SEQRES 16 A 262 ARG ASN LYS GLU ALA ILE TYR ARG LEU LYS ASP SER LEU SEQRES 17 A 262 SER LYS SER ARG GLU PRO PHE HIS ILE LYS LYS GLN ALA SEQRES 18 A 262 MET ALA ARG LEU ASN SER PHE LEU GLN LYS LYS GLU GLU SEQRES 19 A 262 PRO THR VAL SER SER SER ALA LYS THR ASN GLU LEU SER SEQRES 20 A 262 SER LYS VAL ILE ILE LYS GLU SER ILE ILE ASN GLU ALA SEQRES 21 A 262 LYS THR SEQRES 1 B 155 MET ALA SER MET THR GLY GLY GLN GLN MET GLY PRO PHE SEQRES 2 B 155 LEU THR PRO ASP ASN ILE ALA SER SER ILE LEU TYR SER SEQRES 3 B 155 THR ALA SER PHE SER ARG SER LYS PRO ASP ARG PRO ARG SEQRES 4 B 155 LEU ASN LEU SER LEU GLU LEU LYS LEU MET GLN ASN GLU SEQRES 5 B 155 LEU ASN LYS GLY GLN LEU LYS LYS GLN PHE LYS GLY ASP SEQRES 6 B 155 LEU ARG ASN LEU ALA ASP TRP ASN ASN LEU SER LEU VAL SEQRES 7 B 155 SER SER LYS PHE PRO SER LEU PRO ILE THR ASN LEU ARG SEQRES 8 B 155 PRO ASP GLY SER PHE LEU LYS HIS ARG ARG PHE ASN GLU SEQRES 9 B 155 GLU ILE ALA TYR ASN ARG GLN THR LEU GLU LYS ALA ILE SEQRES 10 B 155 LYS GLN LEU ASP LEU SER PRO ASP LYS VAL ILE GLN LEU SEQRES 11 B 155 ARG GLU GLN ASN GLY VAL ALA VAL ASN GLY ARG VAL CYS SEQRES 12 B 155 TYR PRO THR ARG ASN LYS HIS SER GLU ILE SER ALA HET ZN A1501 1 HET ZN A1502 1 HET CL A1503 1 HET CL A1504 1 HETNAM ZN ZINC ION HETNAM CL CHLORIDE ION FORMUL 3 ZN 2(ZN 2+) FORMUL 5 CL 2(CL 1-) FORMUL 7 HOH *30(H2 O) HELIX 1 AA1 ASP A 1222 ALA A 1231 1 10 HELIX 2 AA2 ASN A 1240 LEU A 1254 1 15 HELIX 3 AA3 SER A 1292 LEU A 1302 1 11 HELIX 4 AA4 CYS A 1323 ILE A 1327 5 5 HELIX 5 AA5 CYS A 1347 ARG A 1351 5 5 HELIX 6 AA6 ASN A 1352 LYS A 1365 1 14 HELIX 7 AA7 PRO A 1369 SER A 1382 1 14 HELIX 8 AA8 ASN B 363 ALA B 373 1 11 HELIX 9 AA9 ASN B 386 ASN B 396 1 11 HELIX 10 AB1 LEU B 403 GLY B 409 5 7 HELIX 11 AB2 ASP B 410 LEU B 414 5 5 HELIX 12 AB3 ASP B 416 PHE B 427 1 12 HELIX 13 AB4 PRO B 431 LEU B 435 5 5 HELIX 14 AB5 ARG B 446 LEU B 465 1 20 HELIX 15 AB6 SER B 468 ASN B 479 1 12 SHEET 1 AA1 2 LEU A1286 VAL A1287 0 SHEET 2 AA1 2 LEU A1330 GLU A1331 1 O LEU A1330 N VAL A1287 SHEET 1 AA2 3 PHE B 441 LEU B 442 0 SHEET 2 AA2 3 VAL B 487 PRO B 490 -1 O CYS B 488 N PHE B 441 SHEET 3 AA2 3 VAL B 481 ALA B 482 -1 N ALA B 482 O TYR B 489 LINK SG CYS A1311 ZN ZN A1501 1555 1555 2.33 LINK SG CYS A1314 ZN ZN A1501 1555 1555 2.31 LINK NE2 HIS A1318 ZN ZN A1501 1555 1555 2.05 LINK SG CYS A1323 ZN ZN A1501 1555 1555 2.28 LINK SG CYS A1333 ZN ZN A1502 1555 1555 2.35 LINK SG CYS A1336 ZN ZN A1502 1555 1555 2.35 LINK NE2 HIS A1340 ZN ZN A1502 1555 1555 2.03 LINK SG CYS A1347 ZN ZN A1502 1555 1555 2.30 SITE 1 AC1 6 CYS A1311 CYS A1314 HIS A1318 CYS A1323 SITE 2 AC1 6 PRO A1324 SER B 421 SITE 1 AC2 4 CYS A1333 CYS A1336 HIS A1340 CYS A1347 SITE 1 AC3 3 SER A1304 ARG A1310 LYS A1317 SITE 1 AC4 1 LYS A1373 CRYST1 105.680 52.850 81.970 90.00 115.63 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009463 0.000000 0.004539 0.00000 SCALE2 0.000000 0.018921 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013530 0.00000