HEADER LYASE 04-MAR-16 5IL8 TITLE TOBACCO 5-EPI-ARISTOLOCHENE SYNTHASE WITH MOPSO BUFFER MOLECULE AND TITLE 2 CA2+ IONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-EPI-ARISTOLOCHENE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EAS; COMPND 5 EC: 4.2.3.61; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: COMMON TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 GENE: EAS3, EAS4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PH9GW KEYWDS TERPENE SYNTHASE, TEAS, MOPSO, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL REVDAT 2 27-SEP-23 5IL8 1 REMARK REVDAT 1 08-MAR-17 5IL8 0 JRNL AUTH H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL JRNL TITL SMALL-MOLECULE BUFFER COMPONENTS CAN DIRECTLY AFFECT JRNL TITL 2 TERPENE-SYNTHASE ACTIVITY BY INTERACTING WITH THE JRNL TITL 3 SUBSTRATE-BINDING SITE OF THE ENZYME JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 44993 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.380 REMARK 3 FREE R VALUE TEST SET COUNT : 1520 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.2010 - 5.1124 1.00 4249 154 0.1421 0.1469 REMARK 3 2 5.1124 - 4.0589 1.00 4052 141 0.1406 0.1792 REMARK 3 3 4.0589 - 3.5461 0.96 3832 135 0.2305 0.2229 REMARK 3 4 3.5461 - 3.2220 0.98 3914 140 0.2014 0.2290 REMARK 3 5 3.2220 - 2.9912 0.99 3952 141 0.2078 0.2415 REMARK 3 6 2.9912 - 2.8149 0.99 3917 134 0.2103 0.2422 REMARK 3 7 2.8149 - 2.6739 1.00 3962 142 0.2045 0.2297 REMARK 3 8 2.6739 - 2.5575 0.99 3926 130 0.2106 0.2811 REMARK 3 9 2.5575 - 2.4591 1.00 3915 130 0.2136 0.2489 REMARK 3 10 2.4591 - 2.3742 1.00 3919 143 0.2168 0.2731 REMARK 3 11 2.3742 - 2.3000 0.98 3835 130 0.2301 0.2568 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.480 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4494 REMARK 3 ANGLE : 0.968 6093 REMARK 3 CHIRALITY : 0.036 685 REMARK 3 PLANARITY : 0.004 769 REMARK 3 DIHEDRAL : 16.552 1684 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7696 56.8319 20.3406 REMARK 3 T TENSOR REMARK 3 T11: 0.4816 T22: 0.3913 REMARK 3 T33: 0.8171 T12: -0.0977 REMARK 3 T13: 0.0544 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.0881 L22: 3.6673 REMARK 3 L33: 1.2000 L12: -0.4665 REMARK 3 L13: 0.1061 L23: 0.1789 REMARK 3 S TENSOR REMARK 3 S11: -0.0247 S12: -0.0651 S13: -0.0505 REMARK 3 S21: 0.1233 S22: 0.0077 S23: 1.1917 REMARK 3 S31: 0.0736 S32: -0.3634 S33: 0.0126 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 58 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 46.8217 55.0430 27.6337 REMARK 3 T TENSOR REMARK 3 T11: 0.5298 T22: 0.3089 REMARK 3 T33: 0.4756 T12: 0.0253 REMARK 3 T13: -0.1043 T23: -0.0361 REMARK 3 L TENSOR REMARK 3 L11: 2.4311 L22: 4.1670 REMARK 3 L33: 1.8897 L12: 1.2299 REMARK 3 L13: 0.2263 L23: 0.5102 REMARK 3 S TENSOR REMARK 3 S11: 0.0807 S12: -0.3060 S13: -0.2758 REMARK 3 S21: 0.7964 S22: 0.0961 S23: -0.4165 REMARK 3 S31: 0.1875 S32: 0.2228 S33: -0.1688 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 57.7354 64.0601 16.3468 REMARK 3 T TENSOR REMARK 3 T11: 0.3186 T22: 0.3776 REMARK 3 T33: 0.5087 T12: -0.0024 REMARK 3 T13: -0.0538 T23: -0.0964 REMARK 3 L TENSOR REMARK 3 L11: 5.9707 L22: 4.0286 REMARK 3 L33: 3.9466 L12: -0.7571 REMARK 3 L13: -3.9103 L23: 2.7244 REMARK 3 S TENSOR REMARK 3 S11: -0.0778 S12: -0.3818 S13: -0.0245 REMARK 3 S21: -0.0630 S22: 0.3126 S23: -0.6668 REMARK 3 S31: -0.0633 S32: 0.8712 S33: -0.2652 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 195 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.8402 62.9646 7.0535 REMARK 3 T TENSOR REMARK 3 T11: 0.2229 T22: 0.2822 REMARK 3 T33: 0.3540 T12: -0.0407 REMARK 3 T13: 0.0233 T23: -0.0411 REMARK 3 L TENSOR REMARK 3 L11: 1.8217 L22: 3.8324 REMARK 3 L33: 6.2452 L12: -2.3377 REMARK 3 L13: -0.9867 L23: 3.2933 REMARK 3 S TENSOR REMARK 3 S11: 0.0752 S12: 0.0792 S13: 0.1618 REMARK 3 S21: -0.1827 S22: 0.0449 S23: -0.2259 REMARK 3 S31: -0.2835 S32: 0.1125 S33: -0.0606 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 196 THROUGH 412 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7249 75.1080 20.8356 REMARK 3 T TENSOR REMARK 3 T11: 0.3395 T22: 0.3374 REMARK 3 T33: 0.7550 T12: 0.0154 REMARK 3 T13: 0.0400 T23: -0.0741 REMARK 3 L TENSOR REMARK 3 L11: 1.5023 L22: 3.0409 REMARK 3 L33: 0.8134 L12: 0.4029 REMARK 3 L13: -0.1500 L23: 0.3034 REMARK 3 S TENSOR REMARK 3 S11: -0.0143 S12: -0.0733 S13: 0.3197 REMARK 3 S21: 0.1055 S22: -0.0115 S23: 1.0789 REMARK 3 S31: -0.0974 S32: -0.2581 S33: 0.0271 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 413 THROUGH 519 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.3045 81.1105 16.6908 REMARK 3 T TENSOR REMARK 3 T11: 0.3345 T22: 0.2567 REMARK 3 T33: 0.5004 T12: 0.0097 REMARK 3 T13: -0.0269 T23: -0.0669 REMARK 3 L TENSOR REMARK 3 L11: 2.0614 L22: 5.4680 REMARK 3 L33: 3.9301 L12: -0.1946 REMARK 3 L13: -0.1917 L23: -1.6630 REMARK 3 S TENSOR REMARK 3 S11: 0.0020 S12: 0.1364 S13: 0.3223 REMARK 3 S21: -0.4050 S22: -0.0129 S23: 0.3290 REMARK 3 S31: -0.2055 S32: -0.1214 S33: -0.0338 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 520 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6419 64.0568 8.3839 REMARK 3 T TENSOR REMARK 3 T11: 0.4931 T22: 0.4026 REMARK 3 T33: 0.6575 T12: -0.0421 REMARK 3 T13: -0.0907 T23: -0.0902 REMARK 3 L TENSOR REMARK 3 L11: 5.3576 L22: 2.0648 REMARK 3 L33: 6.3673 L12: 2.2995 REMARK 3 L13: 0.3506 L23: -0.2957 REMARK 3 S TENSOR REMARK 3 S11: -0.2921 S12: 0.5787 S13: 0.4950 REMARK 3 S21: -0.7948 S22: 0.1881 S23: 0.7759 REMARK 3 S31: -0.4964 S32: 0.1071 S33: 0.0521 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IL8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000218993. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45472 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 42.190 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.10240 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 8.30 REMARK 200 R MERGE FOR SHELL (I) : 0.63160 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.870 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5IM1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MOPSO, PH 7, 100 MM CA ACETATE, REMARK 280 10% PEG 8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.91000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 63.47000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 63.47000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 30.95500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 63.47000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 63.47000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 92.86500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 63.47000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 63.47000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 30.95500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 63.47000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 63.47000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 92.86500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 61.91000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 907 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 ALA A 7 REMARK 465 ASN A 8 REMARK 465 TYR A 9 REMARK 465 GLU A 10 REMARK 465 GLU A 11 REMARK 465 GLU A 12 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 804 O HOH A 857 1.90 REMARK 500 O HOH A 747 O HOH A 794 1.91 REMARK 500 O HOH A 880 O HOH A 896 2.00 REMARK 500 O HOH A 886 O HOH A 887 2.00 REMARK 500 O HOH A 840 O HOH A 889 2.01 REMARK 500 O HOH A 735 O HOH A 856 2.01 REMARK 500 OE1 GLU A 504 O HOH A 701 2.08 REMARK 500 OH TYR A 405 OE1 GLU A 434 2.15 REMARK 500 O HOH A 705 O HOH A 719 2.16 REMARK 500 O HOH A 855 O HOH A 861 2.16 REMARK 500 O HOH A 847 O HOH A 873 2.16 REMARK 500 O HOH A 790 O HOH A 897 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 759 O HOH A 901 4454 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 19 22.24 -144.78 REMARK 500 CYS A 101 62.28 -168.97 REMARK 500 ILE A 214 -66.93 -109.04 REMARK 500 TYR A 307 -61.34 -156.73 REMARK 500 TRP A 323 71.37 50.51 REMARK 500 VAL A 533 -61.85 -90.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 602 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 301 OD1 REMARK 620 2 ASP A 301 OD2 50.0 REMARK 620 3 ASP A 305 OD1 97.9 126.2 REMARK 620 4 6BX A 603 O13 126.8 86.5 135.1 REMARK 620 5 6BY A 604 O01 122.9 79.8 137.2 7.9 REMARK 620 6 HOH A 705 O 101.4 151.4 47.5 117.1 124.7 REMARK 620 7 HOH A 719 O 60.1 108.1 47.8 157.7 165.1 44.7 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 601 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 444 OD2 REMARK 620 2 GLU A 452 OE2 136.4 REMARK 620 3 6BX A 603 O01 91.4 77.6 REMARK 620 4 6BY A 604 O13 74.1 105.4 28.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6BX A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6BY A 604 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IK0 RELATED DB: PDB REMARK 900 RELATED ID: 5IK6 RELATED DB: PDB REMARK 900 RELATED ID: 5IK9 RELATED DB: PDB REMARK 900 RELATED ID: 5IKA RELATED DB: PDB REMARK 900 RELATED ID: 5IKH RELATED DB: PDB REMARK 900 RELATED ID: 5IL3 RELATED DB: PDB REMARK 900 RELATED ID: 5ILD RELATED DB: PDB REMARK 900 RELATED ID: 5ILH RELATED DB: PDB REMARK 900 RELATED ID: 5ILI RELATED DB: PDB REMARK 900 RELATED ID: 5ILJ RELATED DB: PDB REMARK 900 RELATED ID: 5ILK RELATED DB: PDB REMARK 900 RELATED ID: 5ILY RELATED DB: PDB REMARK 900 RELATED ID: 5ILZ RELATED DB: PDB REMARK 900 RELATED ID: 5IM1 RELATED DB: PDB DBREF 5IL8 A 1 548 UNP Q40577 5EAS_TOBAC 1 548 SEQADV 5IL8 GLY A -1 UNP Q40577 EXPRESSION TAG SEQADV 5IL8 SER A 0 UNP Q40577 EXPRESSION TAG SEQRES 1 A 550 GLY SER MET ALA SER ALA ALA VAL ALA ASN TYR GLU GLU SEQRES 2 A 550 GLU ILE VAL ARG PRO VAL ALA ASP PHE SER PRO SER LEU SEQRES 3 A 550 TRP GLY ASP GLN PHE LEU SER PHE SER ILE LYS ASN GLN SEQRES 4 A 550 VAL ALA GLU LYS TYR ALA LYS GLU ILE GLU ALA LEU LYS SEQRES 5 A 550 GLU GLN THR ARG ASN MET LEU LEU ALA THR GLY MET LYS SEQRES 6 A 550 LEU ALA ASP THR LEU ASN LEU ILE ASP THR ILE GLU ARG SEQRES 7 A 550 LEU GLY ILE SER TYR HIS PHE GLU LYS GLU ILE ASP ASP SEQRES 8 A 550 ILE LEU ASP GLN ILE TYR ASN GLN ASN SER ASN CYS ASN SEQRES 9 A 550 ASP LEU CYS THR SER ALA LEU GLN PHE ARG LEU LEU ARG SEQRES 10 A 550 GLN HIS GLY PHE ASN ILE SER PRO GLU ILE PHE SER LYS SEQRES 11 A 550 PHE GLN ASP GLU ASN GLY LYS PHE LYS GLU SER LEU ALA SEQRES 12 A 550 SER ASP VAL LEU GLY LEU LEU ASN LEU TYR GLU ALA SER SEQRES 13 A 550 HIS VAL ARG THR HIS ALA ASP ASP ILE LEU GLU ASP ALA SEQRES 14 A 550 LEU ALA PHE SER THR ILE HIS LEU GLU SER ALA ALA PRO SEQRES 15 A 550 HIS LEU LYS SER PRO LEU ARG GLU GLN VAL THR HIS ALA SEQRES 16 A 550 LEU GLU GLN CYS LEU HIS LYS GLY VAL PRO ARG VAL GLU SEQRES 17 A 550 THR ARG PHE PHE ILE SER SER ILE TYR ASP LYS GLU GLN SEQRES 18 A 550 SER LYS ASN ASN VAL LEU LEU ARG PHE ALA LYS LEU ASP SEQRES 19 A 550 PHE ASN LEU LEU GLN MET LEU HIS LYS GLN GLU LEU ALA SEQRES 20 A 550 GLN VAL SER ARG TRP TRP LYS ASP LEU ASP PHE VAL THR SEQRES 21 A 550 THR LEU PRO TYR ALA ARG ASP ARG VAL VAL GLU CYS TYR SEQRES 22 A 550 PHE TRP ALA LEU GLY VAL TYR PHE GLU PRO GLN TYR SER SEQRES 23 A 550 GLN ALA ARG VAL MET LEU VAL LYS THR ILE SER MET ILE SEQRES 24 A 550 SER ILE VAL ASP ASP THR PHE ASP ALA TYR GLY THR VAL SEQRES 25 A 550 LYS GLU LEU GLU ALA TYR THR ASP ALA ILE GLN ARG TRP SEQRES 26 A 550 ASP ILE ASN GLU ILE ASP ARG LEU PRO ASP TYR MET LYS SEQRES 27 A 550 ILE SER TYR LYS ALA ILE LEU ASP LEU TYR LYS ASP TYR SEQRES 28 A 550 GLU LYS GLU LEU SER SER ALA GLY ARG SER HIS ILE VAL SEQRES 29 A 550 CYS HIS ALA ILE GLU ARG MET LYS GLU VAL VAL ARG ASN SEQRES 30 A 550 TYR ASN VAL GLU SER THR TRP PHE ILE GLU GLY TYR THR SEQRES 31 A 550 PRO PRO VAL SER GLU TYR LEU SER ASN ALA LEU ALA THR SEQRES 32 A 550 THR THR TYR TYR TYR LEU ALA THR THR SER TYR LEU GLY SEQRES 33 A 550 MET LYS SER ALA THR GLU GLN ASP PHE GLU TRP LEU SER SEQRES 34 A 550 LYS ASN PRO LYS ILE LEU GLU ALA SER VAL ILE ILE CYS SEQRES 35 A 550 ARG VAL ILE ASP ASP THR ALA THR TYR GLU VAL GLU LYS SEQRES 36 A 550 SER ARG GLY GLN ILE ALA THR GLY ILE GLU CYS CYS MET SEQRES 37 A 550 ARG ASP TYR GLY ILE SER THR LYS GLU ALA MET ALA LYS SEQRES 38 A 550 PHE GLN ASN MET ALA GLU THR ALA TRP LYS ASP ILE ASN SEQRES 39 A 550 GLU GLY LEU LEU ARG PRO THR PRO VAL SER THR GLU PHE SEQRES 40 A 550 LEU THR PRO ILE LEU ASN LEU ALA ARG ILE VAL GLU VAL SEQRES 41 A 550 THR TYR ILE HIS ASN LEU ASP GLY TYR THR HIS PRO GLU SEQRES 42 A 550 LYS VAL LEU LYS PRO HIS ILE ILE ASN LEU LEU VAL ASP SEQRES 43 A 550 SER ILE LYS ILE HET CA A 601 1 HET CA A 602 1 HET 6BX A 603 14 HET 6BY A 604 14 HETNAM CA CALCIUM ION HETNAM 6BX (2S)-2-HYDROXY-3-(MORPHOLIN-4-YL)PROPANE-1-SULFONIC HETNAM 2 6BX ACID HETNAM 6BY (2R)-2-HYDROXY-3-(MORPHOLIN-4-YL)PROPANE-1-SULFONIC HETNAM 2 6BY ACID FORMUL 2 CA 2(CA 2+) FORMUL 4 6BX C7 H15 N O5 S FORMUL 5 6BY C7 H15 N O5 S FORMUL 6 HOH *211(H2 O) HELIX 1 AA1 LYS A 35 LEU A 58 1 24 HELIX 2 AA2 LYS A 63 LEU A 77 1 15 HELIX 3 AA3 ILE A 79 HIS A 82 5 4 HELIX 4 AA4 PHE A 83 ASN A 98 1 16 HELIX 5 AA5 ASP A 103 HIS A 117 1 15 HELIX 6 AA6 SER A 122 GLN A 130 5 9 HELIX 7 AA7 LYS A 137 SER A 142 5 6 HELIX 8 AA8 ASP A 143 SER A 154 1 12 HELIX 9 AA9 HIS A 155 ARG A 157 5 3 HELIX 10 AB1 ASP A 161 GLU A 165 5 5 HELIX 11 AB2 ASP A 166 ALA A 179 1 14 HELIX 12 AB3 PRO A 180 LEU A 182 5 3 HELIX 13 AB4 PRO A 185 GLN A 196 1 12 HELIX 14 AB5 VAL A 202 ILE A 214 1 13 HELIX 15 AB6 TYR A 215 GLU A 218 5 4 HELIX 16 AB7 ASN A 222 ASP A 253 1 32 HELIX 17 AB8 ASP A 255 LEU A 260 1 6 HELIX 18 AB9 ARG A 266 TYR A 278 1 13 HELIX 19 AC1 GLU A 280 GLN A 282 5 3 HELIX 20 AC2 TYR A 283 TYR A 307 1 25 HELIX 21 AC3 THR A 309 TRP A 323 1 15 HELIX 22 AC4 ASP A 324 LEU A 331 5 8 HELIX 23 AC5 PRO A 332 LEU A 353 1 22 HELIX 24 AC6 ARG A 358 HIS A 360 5 3 HELIX 25 AC7 ILE A 361 GLY A 386 1 26 HELIX 26 AC8 PRO A 390 LEU A 399 1 10 HELIX 27 AC9 ALA A 400 THR A 402 5 3 HELIX 28 AD1 THR A 403 TYR A 412 1 10 HELIX 29 AD2 THR A 419 LYS A 428 1 10 HELIX 30 AD3 PRO A 430 ARG A 455 1 26 HELIX 31 AD4 THR A 460 GLY A 470 1 11 HELIX 32 AD5 SER A 472 LEU A 495 1 24 HELIX 33 AD6 SER A 502 PHE A 505 5 4 HELIX 34 AD7 LEU A 506 TYR A 520 1 15 HELIX 35 AD8 ILE A 521 LEU A 524 5 4 HELIX 36 AD9 VAL A 533 VAL A 543 1 11 LINK OD1 ASP A 301 CA CA A 602 1555 1555 2.76 LINK OD2 ASP A 301 CA CA A 602 1555 1555 2.37 LINK OD1 ASP A 305 CA CA A 602 1555 1555 2.93 LINK OD2 ASP A 444 CA CA A 601 1555 1555 3.03 LINK OE2 GLU A 452 CA CA A 601 1555 1555 3.08 LINK CA CA A 601 O01A6BX A 603 1555 1555 2.38 LINK CA CA A 601 O13B6BY A 604 1555 1555 2.38 LINK CA CA A 602 O13A6BX A 603 1555 1555 2.38 LINK CA CA A 602 O01B6BY A 604 1555 1555 2.38 LINK CA CA A 602 O HOH A 705 1555 1555 2.67 LINK CA CA A 602 O HOH A 719 1555 1555 2.96 CISPEP 1 SER A 184 PRO A 185 0 5.22 CISPEP 2 ARG A 497 PRO A 498 0 -8.38 SITE 1 AC1 5 ARG A 441 ASP A 444 GLU A 452 6BX A 603 SITE 2 AC1 5 6BY A 604 SITE 1 AC2 6 ASP A 301 ASP A 305 6BX A 603 6BY A 604 SITE 2 AC2 6 HOH A 705 HOH A 719 SITE 1 AC3 12 ARG A 264 TRP A 273 SER A 298 ASP A 301 SITE 2 AC3 12 THR A 403 GLU A 452 ASP A 525 TYR A 527 SITE 3 AC3 12 THR A 528 CA A 601 CA A 602 6BY A 604 SITE 1 AC4 11 ARG A 264 TRP A 273 ILE A 294 ASP A 301 SITE 2 AC4 11 THR A 403 ASP A 444 ASP A 525 TYR A 527 SITE 3 AC4 11 CA A 601 CA A 602 6BX A 603 CRYST1 126.940 126.940 123.820 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007878 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007878 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008076 0.00000