HEADER LYASE 05-MAR-16 5ILZ TITLE TOBACCO 5-EPI-ARISTOLOCHENE SYNTHASE WITH BIS-TRIS PROPANE (BTP) TITLE 2 BUFFER MOLECULE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-EPI-ARISTOLOCHENE SYNTHASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: EAS; COMPND 5 EC: 4.2.3.61; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NICOTIANA TABACUM; SOURCE 3 ORGANISM_COMMON: COMMON TOBACCO; SOURCE 4 ORGANISM_TAXID: 4097; SOURCE 5 GENE: EAS3, EAS4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PH9GW KEYWDS TERPENE SYNTHASE, TEAS, BIS-TRIS PROPANE, BTP, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL REVDAT 2 27-SEP-23 5ILZ 1 REMARK REVDAT 1 08-MAR-17 5ILZ 0 JRNL AUTH H.J.KOO,G.V.LOUIE,Y.XU,M.BOWMAN,J.P.NOEL JRNL TITL SMALL-MOLECULE BUFFER COMPONENTS CAN DIRECTLY AFFECT JRNL TITL 2 TERPENE-SYNTHASE ACTIVITY BY INTERACTING WITH THE JRNL TITL 3 SUBSTRATE-BINDING SITE OF THE ENZYME JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.38 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 69385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.790 REMARK 3 FREE R VALUE TEST SET COUNT : 1934 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 41.3851 - 4.6255 1.00 5282 155 0.1586 0.1770 REMARK 3 2 4.6255 - 3.6721 1.00 5051 149 0.1419 0.1769 REMARK 3 3 3.6721 - 3.2082 1.00 5021 139 0.1636 0.1826 REMARK 3 4 3.2082 - 2.9149 1.00 4960 146 0.1789 0.2099 REMARK 3 5 2.9149 - 2.7060 1.00 4964 136 0.1811 0.2129 REMARK 3 6 2.7060 - 2.5465 1.00 4922 150 0.1882 0.2484 REMARK 3 7 2.5465 - 2.4190 1.00 4914 141 0.1961 0.2463 REMARK 3 8 2.4190 - 2.3137 1.00 4919 137 0.1974 0.2388 REMARK 3 9 2.3137 - 2.2246 1.00 4905 143 0.2104 0.2445 REMARK 3 10 2.2246 - 2.1479 0.99 4816 143 0.2156 0.2681 REMARK 3 11 2.1479 - 2.0807 0.97 4738 142 0.2245 0.2308 REMARK 3 12 2.0807 - 2.0212 0.93 4551 129 0.2485 0.3274 REMARK 3 13 2.0212 - 1.9680 0.88 4312 116 0.2809 0.3061 REMARK 3 14 1.9680 - 1.9200 0.84 4096 108 0.2998 0.3367 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 4475 REMARK 3 ANGLE : 1.093 6071 REMARK 3 CHIRALITY : 0.090 684 REMARK 3 PLANARITY : 0.004 768 REMARK 3 DIHEDRAL : 14.831 1659 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 97 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.6506 55.5334 23.2957 REMARK 3 T TENSOR REMARK 3 T11: 0.2817 T22: 0.1413 REMARK 3 T33: 0.1499 T12: -0.0226 REMARK 3 T13: 0.0126 T23: -0.0507 REMARK 3 L TENSOR REMARK 3 L11: 2.1549 L22: 2.0809 REMARK 3 L33: 1.3514 L12: -0.3922 REMARK 3 L13: 0.0783 L23: 0.2046 REMARK 3 S TENSOR REMARK 3 S11: -0.0957 S12: -0.1382 S13: -0.1369 REMARK 3 S21: 0.2483 S22: 0.0399 S23: 0.1148 REMARK 3 S31: 0.1392 S32: -0.1052 S33: 0.0382 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 98 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 56.5715 63.2902 16.2839 REMARK 3 T TENSOR REMARK 3 T11: 0.1714 T22: 0.3123 REMARK 3 T33: 0.2835 T12: 0.0064 REMARK 3 T13: -0.0503 T23: -0.1253 REMARK 3 L TENSOR REMARK 3 L11: 4.9811 L22: 2.7587 REMARK 3 L33: 3.8446 L12: -0.1943 REMARK 3 L13: -2.1287 L23: 2.9243 REMARK 3 S TENSOR REMARK 3 S11: -0.0761 S12: -0.0685 S13: 0.1474 REMARK 3 S21: 0.0565 S22: 0.5401 S23: -0.5402 REMARK 3 S31: 0.0503 S32: 0.8459 S33: -0.2946 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 144 THROUGH 222 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.7158 59.0513 9.0771 REMARK 3 T TENSOR REMARK 3 T11: 0.1120 T22: 0.1427 REMARK 3 T33: 0.1697 T12: 0.0042 REMARK 3 T13: 0.0044 T23: -0.0502 REMARK 3 L TENSOR REMARK 3 L11: 1.7203 L22: 1.5583 REMARK 3 L33: 2.0251 L12: 0.0628 REMARK 3 L13: -0.8805 L23: 0.5239 REMARK 3 S TENSOR REMARK 3 S11: -0.0411 S12: 0.1224 S13: -0.1152 REMARK 3 S21: -0.0613 S22: 0.0861 S23: -0.1545 REMARK 3 S31: 0.0412 S32: 0.1557 S33: -0.0450 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 223 THROUGH 306 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.9373 66.1386 18.8022 REMARK 3 T TENSOR REMARK 3 T11: 0.1805 T22: 0.1824 REMARK 3 T33: 0.2589 T12: -0.0283 REMARK 3 T13: 0.0242 T23: -0.0680 REMARK 3 L TENSOR REMARK 3 L11: 1.2868 L22: 4.1443 REMARK 3 L33: 0.6940 L12: -1.2416 REMARK 3 L13: -0.0360 L23: 0.0706 REMARK 3 S TENSOR REMARK 3 S11: 0.1030 S12: 0.0629 S13: -0.0976 REMARK 3 S21: -0.2239 S22: -0.1264 S23: 0.5744 REMARK 3 S31: 0.0599 S32: -0.2224 S33: 0.0112 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 307 THROUGH 402 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9333 87.6261 20.6604 REMARK 3 T TENSOR REMARK 3 T11: 0.2562 T22: 0.1754 REMARK 3 T33: 0.3753 T12: 0.0575 REMARK 3 T13: 0.0766 T23: -0.0427 REMARK 3 L TENSOR REMARK 3 L11: 1.3091 L22: 1.9621 REMARK 3 L33: 1.5666 L12: 0.4750 REMARK 3 L13: -0.4382 L23: -0.6834 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: -0.0266 S13: 0.3039 REMARK 3 S21: 0.1110 S22: 0.1195 S23: 0.4676 REMARK 3 S31: -0.2085 S32: -0.3078 S33: -0.1069 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 403 THROUGH 454 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.6793 80.1095 19.9631 REMARK 3 T TENSOR REMARK 3 T11: 0.1577 T22: 0.0567 REMARK 3 T33: 0.2652 T12: 0.0144 REMARK 3 T13: 0.0184 T23: -0.0815 REMARK 3 L TENSOR REMARK 3 L11: 3.1957 L22: 3.2735 REMARK 3 L33: 6.1495 L12: 0.7486 REMARK 3 L13: -2.0111 L23: -0.1952 REMARK 3 S TENSOR REMARK 3 S11: -0.0328 S12: 0.0002 S13: 0.2582 REMARK 3 S21: -0.1300 S22: -0.0544 S23: 0.2157 REMARK 3 S31: -0.2382 S32: -0.1518 S33: 0.0704 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 455 THROUGH 495 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.7992 85.2779 6.3640 REMARK 3 T TENSOR REMARK 3 T11: 0.3888 T22: 0.2328 REMARK 3 T33: 0.2581 T12: 0.0217 REMARK 3 T13: 0.0365 T23: 0.0122 REMARK 3 L TENSOR REMARK 3 L11: 2.4556 L22: 5.7292 REMARK 3 L33: 6.0827 L12: -0.7246 REMARK 3 L13: 0.0100 L23: -2.4567 REMARK 3 S TENSOR REMARK 3 S11: 0.3458 S12: 0.6211 S13: 0.3417 REMARK 3 S21: -0.9773 S22: -0.1851 S23: 0.0891 REMARK 3 S31: -0.1789 S32: 0.0206 S33: -0.0500 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 496 THROUGH 548 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.9103 66.7622 14.4069 REMARK 3 T TENSOR REMARK 3 T11: 0.2039 T22: 0.1514 REMARK 3 T33: 0.1786 T12: 0.0175 REMARK 3 T13: -0.0045 T23: -0.0509 REMARK 3 L TENSOR REMARK 3 L11: 3.2346 L22: 3.6432 REMARK 3 L33: 2.3990 L12: 2.0735 REMARK 3 L13: 1.2392 L23: 1.8244 REMARK 3 S TENSOR REMARK 3 S11: -0.1555 S12: 0.3308 S13: 0.0594 REMARK 3 S21: -0.4461 S22: 0.0837 S23: 0.2239 REMARK 3 S31: -0.2537 S32: 0.0140 S33: 0.0977 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ILZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219033. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71347 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.920 REMARK 200 RESOLUTION RANGE LOW (A) : 41.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.40 REMARK 200 R MERGE (I) : 0.45940 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.6200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.92 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 1.40600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.690 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 5IM1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BTP, PH 7, 75 MM LI CITRATE, REMARK 280 12% PEG 8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 278K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.77000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 62.51500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 62.51500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.38500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 62.51500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 62.51500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 88.15500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 62.51500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 62.51500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 29.38500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 62.51500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 62.51500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 88.15500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 58.77000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 735 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 889 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1198 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1225 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 3 REMARK 465 ALA A 4 REMARK 465 ALA A 5 REMARK 465 VAL A 6 REMARK 465 ALA A 7 REMARK 465 ASN A 8 REMARK 465 TYR A 9 REMARK 465 GLU A 10 REMARK 465 GLU A 11 REMARK 465 GLU A 12 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1143 O HOH A 1214 1.74 REMARK 500 OXT ILE A 548 O HOH A 701 1.88 REMARK 500 O HOH A 748 O HOH A 763 1.93 REMARK 500 O HOH A 790 O HOH A 1033 1.94 REMARK 500 OD2 ASP A 265 O HOH A 702 1.94 REMARK 500 O HOH A 942 O HOH A 1127 1.96 REMARK 500 O HOH A 703 O HOH A 869 1.97 REMARK 500 OD2 ASP A 348 O HOH A 703 2.05 REMARK 500 O HOH A 1067 O HOH A 1130 2.07 REMARK 500 NZ LYS A 428 O HOH A 704 2.08 REMARK 500 OE1 GLU A 493 O HOH A 705 2.08 REMARK 500 O HOH A 917 O HOH A 1162 2.09 REMARK 500 OH TYR A 405 OE1 GLU A 434 2.12 REMARK 500 O HOH A 731 O HOH A 927 2.15 REMARK 500 O ALA A 263 O HOH A 706 2.16 REMARK 500 O HOH A 969 O HOH A 1149 2.16 REMARK 500 O HOH A 956 O HOH A 1171 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 761 O HOH A 1179 8665 1.99 REMARK 500 O HOH A 1074 O HOH A 1176 4454 2.08 REMARK 500 O HOH A 1140 O HOH A 1208 8665 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 131 -167.80 -101.14 REMARK 500 THR A 158 -168.66 -110.81 REMARK 500 ASP A 161 45.12 -105.28 REMARK 500 ILE A 214 -70.48 -114.39 REMARK 500 TYR A 307 -53.98 -165.62 REMARK 500 ASP A 525 97.92 -68.07 REMARK 500 VAL A 533 -74.88 -98.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1262 DISTANCE = 5.83 ANGSTROMS REMARK 525 HOH A1263 DISTANCE = 6.22 ANGSTROMS REMARK 525 HOH A1264 DISTANCE = 6.52 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue B3P A 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IK0 RELATED DB: PDB REMARK 900 RELATED ID: 5IK6 RELATED DB: PDB REMARK 900 RELATED ID: 5IK9 RELATED DB: PDB REMARK 900 RELATED ID: 5IKA RELATED DB: PDB REMARK 900 RELATED ID: 5IKH RELATED DB: PDB REMARK 900 RELATED ID: 5IL3 RELATED DB: PDB REMARK 900 RELATED ID: 5IL8 RELATED DB: PDB REMARK 900 RELATED ID: 5ILD RELATED DB: PDB REMARK 900 RELATED ID: 5ILH RELATED DB: PDB REMARK 900 RELATED ID: 5ILI RELATED DB: PDB REMARK 900 RELATED ID: 5ILJ RELATED DB: PDB REMARK 900 RELATED ID: 5ILK RELATED DB: PDB REMARK 900 RELATED ID: 5ILY RELATED DB: PDB REMARK 900 RELATED ID: 5IM1 RELATED DB: PDB DBREF 5ILZ A 1 548 UNP Q40577 5EAS_TOBAC 1 548 SEQADV 5ILZ GLY A -1 UNP Q40577 EXPRESSION TAG SEQADV 5ILZ SER A 0 UNP Q40577 EXPRESSION TAG SEQRES 1 A 550 GLY SER MET ALA SER ALA ALA VAL ALA ASN TYR GLU GLU SEQRES 2 A 550 GLU ILE VAL ARG PRO VAL ALA ASP PHE SER PRO SER LEU SEQRES 3 A 550 TRP GLY ASP GLN PHE LEU SER PHE SER ILE LYS ASN GLN SEQRES 4 A 550 VAL ALA GLU LYS TYR ALA LYS GLU ILE GLU ALA LEU LYS SEQRES 5 A 550 GLU GLN THR ARG ASN MET LEU LEU ALA THR GLY MET LYS SEQRES 6 A 550 LEU ALA ASP THR LEU ASN LEU ILE ASP THR ILE GLU ARG SEQRES 7 A 550 LEU GLY ILE SER TYR HIS PHE GLU LYS GLU ILE ASP ASP SEQRES 8 A 550 ILE LEU ASP GLN ILE TYR ASN GLN ASN SER ASN CYS ASN SEQRES 9 A 550 ASP LEU CYS THR SER ALA LEU GLN PHE ARG LEU LEU ARG SEQRES 10 A 550 GLN HIS GLY PHE ASN ILE SER PRO GLU ILE PHE SER LYS SEQRES 11 A 550 PHE GLN ASP GLU ASN GLY LYS PHE LYS GLU SER LEU ALA SEQRES 12 A 550 SER ASP VAL LEU GLY LEU LEU ASN LEU TYR GLU ALA SER SEQRES 13 A 550 HIS VAL ARG THR HIS ALA ASP ASP ILE LEU GLU ASP ALA SEQRES 14 A 550 LEU ALA PHE SER THR ILE HIS LEU GLU SER ALA ALA PRO SEQRES 15 A 550 HIS LEU LYS SER PRO LEU ARG GLU GLN VAL THR HIS ALA SEQRES 16 A 550 LEU GLU GLN CYS LEU HIS LYS GLY VAL PRO ARG VAL GLU SEQRES 17 A 550 THR ARG PHE PHE ILE SER SER ILE TYR ASP LYS GLU GLN SEQRES 18 A 550 SER LYS ASN ASN VAL LEU LEU ARG PHE ALA LYS LEU ASP SEQRES 19 A 550 PHE ASN LEU LEU GLN MET LEU HIS LYS GLN GLU LEU ALA SEQRES 20 A 550 GLN VAL SER ARG TRP TRP LYS ASP LEU ASP PHE VAL THR SEQRES 21 A 550 THR LEU PRO TYR ALA ARG ASP ARG VAL VAL GLU CYS TYR SEQRES 22 A 550 PHE TRP ALA LEU GLY VAL TYR PHE GLU PRO GLN TYR SER SEQRES 23 A 550 GLN ALA ARG VAL MET LEU VAL LYS THR ILE SER MET ILE SEQRES 24 A 550 SER ILE VAL ASP ASP THR PHE ASP ALA TYR GLY THR VAL SEQRES 25 A 550 LYS GLU LEU GLU ALA TYR THR ASP ALA ILE GLN ARG TRP SEQRES 26 A 550 ASP ILE ASN GLU ILE ASP ARG LEU PRO ASP TYR MET LYS SEQRES 27 A 550 ILE SER TYR LYS ALA ILE LEU ASP LEU TYR LYS ASP TYR SEQRES 28 A 550 GLU LYS GLU LEU SER SER ALA GLY ARG SER HIS ILE VAL SEQRES 29 A 550 CYS HIS ALA ILE GLU ARG MET LYS GLU VAL VAL ARG ASN SEQRES 30 A 550 TYR ASN VAL GLU SER THR TRP PHE ILE GLU GLY TYR THR SEQRES 31 A 550 PRO PRO VAL SER GLU TYR LEU SER ASN ALA LEU ALA THR SEQRES 32 A 550 THR THR TYR TYR TYR LEU ALA THR THR SER TYR LEU GLY SEQRES 33 A 550 MET LYS SER ALA THR GLU GLN ASP PHE GLU TRP LEU SER SEQRES 34 A 550 LYS ASN PRO LYS ILE LEU GLU ALA SER VAL ILE ILE CYS SEQRES 35 A 550 ARG VAL ILE ASP ASP THR ALA THR TYR GLU VAL GLU LYS SEQRES 36 A 550 SER ARG GLY GLN ILE ALA THR GLY ILE GLU CYS CYS MET SEQRES 37 A 550 ARG ASP TYR GLY ILE SER THR LYS GLU ALA MET ALA LYS SEQRES 38 A 550 PHE GLN ASN MET ALA GLU THR ALA TRP LYS ASP ILE ASN SEQRES 39 A 550 GLU GLY LEU LEU ARG PRO THR PRO VAL SER THR GLU PHE SEQRES 40 A 550 LEU THR PRO ILE LEU ASN LEU ALA ARG ILE VAL GLU VAL SEQRES 41 A 550 THR TYR ILE HIS ASN LEU ASP GLY TYR THR HIS PRO GLU SEQRES 42 A 550 LYS VAL LEU LYS PRO HIS ILE ILE ASN LEU LEU VAL ASP SEQRES 43 A 550 SER ILE LYS ILE HET B3P A 600 19 HETNAM B3P 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)- HETNAM 2 B3P PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL FORMUL 2 B3P C11 H26 N2 O6 FORMUL 3 HOH *564(H2 O) HELIX 1 AA1 LYS A 35 LEU A 58 1 24 HELIX 2 AA2 LYS A 63 LEU A 77 1 15 HELIX 3 AA3 ILE A 79 HIS A 82 5 4 HELIX 4 AA4 PHE A 83 ASN A 98 1 16 HELIX 5 AA5 ASP A 103 HIS A 117 1 15 HELIX 6 AA6 SER A 122 GLN A 130 5 9 HELIX 7 AA7 LYS A 137 ALA A 141 5 5 HELIX 8 AA8 ASP A 143 HIS A 155 1 13 HELIX 9 AA9 ASP A 161 GLU A 165 5 5 HELIX 10 AB1 ASP A 166 ALA A 179 1 14 HELIX 11 AB2 PRO A 180 LEU A 182 5 3 HELIX 12 AB3 PRO A 185 GLN A 196 1 12 HELIX 13 AB4 VAL A 202 ILE A 214 1 13 HELIX 14 AB5 TYR A 215 GLU A 218 5 4 HELIX 15 AB6 ASN A 222 ASP A 255 1 34 HELIX 16 AB7 ASP A 255 LEU A 260 1 6 HELIX 17 AB8 ARG A 266 TYR A 278 1 13 HELIX 18 AB9 GLU A 280 GLN A 282 5 3 HELIX 19 AC1 TYR A 283 TYR A 307 1 25 HELIX 20 AC2 THR A 309 TRP A 323 1 15 HELIX 21 AC3 ASP A 324 LEU A 331 5 8 HELIX 22 AC4 PRO A 332 LEU A 353 1 22 HELIX 23 AC5 SER A 354 GLY A 357 5 4 HELIX 24 AC6 ARG A 358 HIS A 360 5 3 HELIX 25 AC7 ILE A 361 GLY A 386 1 26 HELIX 26 AC8 PRO A 390 THR A 402 1 13 HELIX 27 AC9 THR A 403 TYR A 412 1 10 HELIX 28 AD1 THR A 419 LYS A 428 1 10 HELIX 29 AD2 PRO A 430 ARG A 455 1 26 HELIX 30 AD3 THR A 460 GLY A 470 1 11 HELIX 31 AD4 SER A 472 LEU A 495 1 24 HELIX 32 AD5 SER A 502 PHE A 505 5 4 HELIX 33 AD6 LEU A 506 TYR A 520 1 15 HELIX 34 AD7 ILE A 521 LEU A 524 5 4 HELIX 35 AD8 VAL A 533 VAL A 543 1 11 CISPEP 1 SER A 184 PRO A 185 0 4.12 CISPEP 2 ARG A 497 PRO A 498 0 -3.18 SITE 1 AC1 14 TRP A 273 ILE A 294 ILE A 297 SER A 298 SITE 2 AC1 14 ASP A 301 THR A 401 THR A 402 THR A 403 SITE 3 AC1 14 CYS A 440 ASP A 444 TYR A 520 TYR A 527 SITE 4 AC1 14 HOH A 712 HOH A 800 CRYST1 125.030 125.030 117.540 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007998 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007998 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008508 0.00000