HEADER TRANSFERASE/TRANSFERASE INHIBITOR 06-MAR-16 5IME TITLE CRYSTAL STRUCTURE OF P21-ACTIVATED KINASE 1 (PAK1) IN COMPLEX WITH TITLE 2 COMPOUND 9 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE PAK 1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 249-545; COMPND 5 SYNONYM: ALPHA-PAK,P21-ACTIVATED KINASE 1,PAK-1,P65-PAK; COMPND 6 EC: 2.7.11.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PAK1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.LI,W.WANG REVDAT 3 27-SEP-23 5IME 1 JRNL REMARK REVDAT 2 29-JUN-16 5IME 1 JRNL REVDAT 1 25-MAY-16 5IME 0 JRNL AUTH J.RUDOLPH,L.J.MURRAY,C.O.NDUBAKU,T.O'BRIEN,E.BLACKWOOD, JRNL AUTH 2 W.WANG,I.ALIAGAS,L.GAZZARD,J.J.CRAWFORD,J.DROBNICK,W.LEE, JRNL AUTH 3 X.ZHAO,K.P.HOEFLICH,D.A.FAVOR,P.DONG,H.ZHANG,C.E.HEISE,A.OH, JRNL AUTH 4 C.C.ONG,H.LA,P.CHAKRAVARTY,C.CHAN,D.JAKUBIAK,J.EPLER, JRNL AUTH 5 S.RAMASWAMY,R.VEGA,G.CAIN,D.DIAZ,Y.ZHONG JRNL TITL CHEMICALLY DIVERSE GROUP I P21-ACTIVATED KINASE (PAK) JRNL TITL 2 INHIBITORS IMPART ACUTE CARDIOVASCULAR TOXICITY WITH A JRNL TITL 3 NARROW THERAPEUTIC WINDOW. JRNL REF J.MED.CHEM. V. 59 5520 2016 JRNL REFN ISSN 0022-2623 JRNL PMID 27167326 JRNL DOI 10.1021/ACS.JMEDCHEM.6B00638 REMARK 2 REMARK 2 RESOLUTION. 2.22 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.22 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.62 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.900 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 58687 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.120 REMARK 3 FREE R VALUE TEST SET COUNT : 3002 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.6295 - 6.1076 0.85 2329 140 0.1865 0.1963 REMARK 3 2 6.1076 - 4.8511 0.96 2592 164 0.1900 0.2140 REMARK 3 3 4.8511 - 4.2388 0.98 2702 135 0.1612 0.2319 REMARK 3 4 4.2388 - 3.8517 0.98 2704 137 0.1859 0.2325 REMARK 3 5 3.8517 - 3.5758 0.98 2699 142 0.1974 0.2173 REMARK 3 6 3.5758 - 3.3651 0.99 2692 148 0.2186 0.2968 REMARK 3 7 3.3651 - 3.1967 0.98 2660 146 0.2326 0.2715 REMARK 3 8 3.1967 - 3.0576 0.98 2708 142 0.2470 0.2507 REMARK 3 9 3.0576 - 2.9400 0.98 2696 142 0.2367 0.3361 REMARK 3 10 2.9400 - 2.8385 0.98 2653 163 0.2473 0.3202 REMARK 3 11 2.8385 - 2.7498 0.98 2695 138 0.2483 0.2710 REMARK 3 12 2.7498 - 2.6712 0.98 2659 135 0.2487 0.3010 REMARK 3 13 2.6712 - 2.6009 0.98 2688 169 0.2623 0.2886 REMARK 3 14 2.6009 - 2.5375 0.98 2672 150 0.2600 0.2794 REMARK 3 15 2.5375 - 2.4798 0.98 2679 134 0.2610 0.3223 REMARK 3 16 2.4798 - 2.4270 0.98 2665 134 0.2678 0.3313 REMARK 3 17 2.4270 - 2.3785 0.98 2698 156 0.2916 0.3134 REMARK 3 18 2.3785 - 2.3336 0.97 2727 107 0.2942 0.3808 REMARK 3 19 2.3336 - 2.2920 0.98 2636 141 0.3125 0.3333 REMARK 3 20 2.2920 - 2.2531 0.94 2596 135 0.4086 0.4224 REMARK 3 21 2.2531 - 2.2168 0.92 2535 144 0.5537 0.5728 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.320 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.150 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4516 REMARK 3 ANGLE : 0.694 6105 REMARK 3 CHIRALITY : 0.025 693 REMARK 3 PLANARITY : 0.004 790 REMARK 3 DIHEDRAL : 12.458 1708 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 251:346 REMARK 3 ORIGIN FOR THE GROUP (A): 21.6154 -22.4329 5.4101 REMARK 3 T TENSOR REMARK 3 T11: 1.2833 T22: 0.7556 REMARK 3 T33: 1.3676 T12: 0.2178 REMARK 3 T13: 0.5680 T23: -0.0514 REMARK 3 L TENSOR REMARK 3 L11: 2.9856 L22: 1.7265 REMARK 3 L33: 1.7514 L12: 1.1960 REMARK 3 L13: -1.9464 L23: -0.7198 REMARK 3 S TENSOR REMARK 3 S11: -2.0966 S12: 0.9414 S13: -1.3926 REMARK 3 S21: -0.2079 S22: 0.3594 S23: 0.5021 REMARK 3 S31: 1.9399 S32: -0.3328 S33: -0.1500 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 347:541 REMARK 3 ORIGIN FOR THE GROUP (A): 23.6498 -2.5184 20.9923 REMARK 3 T TENSOR REMARK 3 T11: 0.3279 T22: 0.9494 REMARK 3 T33: 0.3688 T12: 0.0702 REMARK 3 T13: -0.1337 T23: 0.0861 REMARK 3 L TENSOR REMARK 3 L11: 4.7826 L22: 3.4462 REMARK 3 L33: 6.1748 L12: -0.4322 REMARK 3 L13: -4.0968 L23: 1.5579 REMARK 3 S TENSOR REMARK 3 S11: -0.1098 S12: -1.2159 S13: -0.1341 REMARK 3 S21: 0.0936 S22: 0.1114 S23: -0.3653 REMARK 3 S31: -0.2690 S32: 1.9184 S33: 0.0051 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND RESID 250:346 REMARK 3 ORIGIN FOR THE GROUP (A): -2.7314 -18.1052 -14.7004 REMARK 3 T TENSOR REMARK 3 T11: 0.7273 T22: 0.5438 REMARK 3 T33: 0.6443 T12: -0.0558 REMARK 3 T13: 0.0612 T23: -0.0481 REMARK 3 L TENSOR REMARK 3 L11: 1.9419 L22: 2.0777 REMARK 3 L33: 1.8329 L12: 1.0381 REMARK 3 L13: 0.2577 L23: -0.6808 REMARK 3 S TENSOR REMARK 3 S11: 0.1713 S12: -0.5853 S13: 0.0393 REMARK 3 S21: 0.8223 S22: -0.3590 S23: 0.5156 REMARK 3 S31: 0.2214 S32: -0.2858 S33: -0.0001 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND RESID 347:541 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7163 2.9899 -16.7625 REMARK 3 T TENSOR REMARK 3 T11: 0.4119 T22: 0.3095 REMARK 3 T33: 0.4495 T12: 0.0373 REMARK 3 T13: -0.0080 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 2.0596 L22: 1.7091 REMARK 3 L33: 4.4555 L12: 0.5470 REMARK 3 L13: -0.8114 L23: -0.2314 REMARK 3 S TENSOR REMARK 3 S11: -0.0135 S12: -0.3333 S13: 0.1240 REMARK 3 S21: 0.4230 S22: 0.0363 S23: 0.1193 REMARK 3 S31: -0.3461 S32: 0.2669 S33: 0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IME COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219071. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 93 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30976 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.210 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 3.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4O0R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS WERE GROWN AT 19 C FROM 1.0 REMARK 280 UL + 1.0 UL VAPOR DIFFUSION DROPS CONTAINING 10 MG/ML PROTEIN, 1 REMARK 280 MM LIGAND, 0.15 M DL-MALIC ACID, 20% - 30% PEG 3350, 4% 1,3- REMARK 280 PROPANEDIOL AND 0.1 M SODIUM MALONATE, PH 7.0, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.41000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 249 REMARK 465 ASP A 250 REMARK 465 LYS A 268 REMARK 465 LYS A 269 REMARK 465 TYR A 270 REMARK 465 THR A 271 REMARK 465 ARG A 272 REMARK 465 PHE A 273 REMARK 465 GLU A 274 REMARK 465 VAL A 290 REMARK 465 ALA A 291 REMARK 465 THR A 292 REMARK 465 GLY A 293 REMARK 465 GLN A 304 REMARK 465 GLN A 305 REMARK 465 GLN A 306 REMARK 465 PRO A 307 REMARK 465 LYS A 308 REMARK 465 ASN A 547 REMARK 465 SER A 548 REMARK 465 SER B 249 REMARK 465 LEU B 303 REMARK 465 GLN B 304 REMARK 465 GLN B 305 REMARK 465 GLN B 306 REMARK 465 GLY B 409 REMARK 465 PHE B 410 REMARK 465 CYS B 411 REMARK 465 ALA B 412 REMARK 465 GLN B 413 REMARK 465 ILE B 414 REMARK 465 THR B 415 REMARK 465 PRO B 416 REMARK 465 LYS B 542 REMARK 465 ASN B 543 REMARK 465 ASN B 544 REMARK 465 HIS B 545 REMARK 465 GLY B 546 REMARK 465 ASN B 547 REMARK 465 SER B 548 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 252 OH TYR A 474 2645 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 281 74.31 -166.40 REMARK 500 ASN A 322 51.31 -144.61 REMARK 500 LEU A 331 -71.13 -120.44 REMARK 500 VAL A 336 -116.33 -79.47 REMARK 500 ASP A 338 -159.78 -85.76 REMARK 500 GLU A 339 155.65 66.19 REMARK 500 ARG A 388 -0.64 66.53 REMARK 500 ASP A 407 81.34 51.88 REMARK 500 SER A 422 20.71 -142.32 REMARK 500 THR A 478 -73.10 -75.11 REMARK 500 LEU A 502 31.27 -99.15 REMARK 500 ARG B 258 4.01 -68.69 REMARK 500 SER B 281 -114.72 54.74 REMARK 500 LYS B 308 -83.25 -65.53 REMARK 500 LEU B 311 42.10 -92.54 REMARK 500 ASN B 322 59.10 -90.93 REMARK 500 LEU B 331 -62.04 -106.43 REMARK 500 ARG B 388 -19.32 77.67 REMARK 500 ASP B 407 75.91 52.99 REMARK 500 THR B 478 -73.88 -83.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6BZ A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6BZ B 601 DBREF 5IME A 249 545 UNP Q13153 PAK1_HUMAN 249 545 DBREF 5IME B 249 545 UNP Q13153 PAK1_HUMAN 249 545 SEQADV 5IME ASN A 389 UNP Q13153 ASP 389 CONFLICT SEQADV 5IME GLU A 423 UNP Q13153 THR 423 CONFLICT SEQADV 5IME GLY A 546 UNP Q13153 EXPRESSION TAG SEQADV 5IME ASN A 547 UNP Q13153 EXPRESSION TAG SEQADV 5IME SER A 548 UNP Q13153 EXPRESSION TAG SEQADV 5IME ASN B 389 UNP Q13153 ASP 389 CONFLICT SEQADV 5IME GLU B 423 UNP Q13153 THR 423 CONFLICT SEQADV 5IME GLY B 546 UNP Q13153 EXPRESSION TAG SEQADV 5IME ASN B 547 UNP Q13153 EXPRESSION TAG SEQADV 5IME SER B 548 UNP Q13153 EXPRESSION TAG SEQRES 1 A 300 SER ASP GLU GLU ILE LEU GLU LYS LEU ARG SER ILE VAL SEQRES 2 A 300 SER VAL GLY ASP PRO LYS LYS LYS TYR THR ARG PHE GLU SEQRES 3 A 300 LYS ILE GLY GLN GLY ALA SER GLY THR VAL TYR THR ALA SEQRES 4 A 300 MET ASP VAL ALA THR GLY GLN GLU VAL ALA ILE LYS GLN SEQRES 5 A 300 MET ASN LEU GLN GLN GLN PRO LYS LYS GLU LEU ILE ILE SEQRES 6 A 300 ASN GLU ILE LEU VAL MET ARG GLU ASN LYS ASN PRO ASN SEQRES 7 A 300 ILE VAL ASN TYR LEU ASP SER TYR LEU VAL GLY ASP GLU SEQRES 8 A 300 LEU TRP VAL VAL MET GLU TYR LEU ALA GLY GLY SER LEU SEQRES 9 A 300 THR ASP VAL VAL THR GLU THR CYS MET ASP GLU GLY GLN SEQRES 10 A 300 ILE ALA ALA VAL CYS ARG GLU CYS LEU GLN ALA LEU GLU SEQRES 11 A 300 PHE LEU HIS SER ASN GLN VAL ILE HIS ARG ASN ILE LYS SEQRES 12 A 300 SER ASP ASN ILE LEU LEU GLY MET ASP GLY SER VAL LYS SEQRES 13 A 300 LEU THR ASP PHE GLY PHE CYS ALA GLN ILE THR PRO GLU SEQRES 14 A 300 GLN SER LYS ARG SER GLU MET VAL GLY THR PRO TYR TRP SEQRES 15 A 300 MET ALA PRO GLU VAL VAL THR ARG LYS ALA TYR GLY PRO SEQRES 16 A 300 LYS VAL ASP ILE TRP SER LEU GLY ILE MET ALA ILE GLU SEQRES 17 A 300 MET ILE GLU GLY GLU PRO PRO TYR LEU ASN GLU ASN PRO SEQRES 18 A 300 LEU ARG ALA LEU TYR LEU ILE ALA THR ASN GLY THR PRO SEQRES 19 A 300 GLU LEU GLN ASN PRO GLU LYS LEU SER ALA ILE PHE ARG SEQRES 20 A 300 ASP PHE LEU ASN ARG CYS LEU GLU MET ASP VAL GLU LYS SEQRES 21 A 300 ARG GLY SER ALA LYS GLU LEU LEU GLN HIS GLN PHE LEU SEQRES 22 A 300 LYS ILE ALA LYS PRO LEU SER SER LEU THR PRO LEU ILE SEQRES 23 A 300 ALA ALA ALA LYS GLU ALA THR LYS ASN ASN HIS GLY ASN SEQRES 24 A 300 SER SEQRES 1 B 300 SER ASP GLU GLU ILE LEU GLU LYS LEU ARG SER ILE VAL SEQRES 2 B 300 SER VAL GLY ASP PRO LYS LYS LYS TYR THR ARG PHE GLU SEQRES 3 B 300 LYS ILE GLY GLN GLY ALA SER GLY THR VAL TYR THR ALA SEQRES 4 B 300 MET ASP VAL ALA THR GLY GLN GLU VAL ALA ILE LYS GLN SEQRES 5 B 300 MET ASN LEU GLN GLN GLN PRO LYS LYS GLU LEU ILE ILE SEQRES 6 B 300 ASN GLU ILE LEU VAL MET ARG GLU ASN LYS ASN PRO ASN SEQRES 7 B 300 ILE VAL ASN TYR LEU ASP SER TYR LEU VAL GLY ASP GLU SEQRES 8 B 300 LEU TRP VAL VAL MET GLU TYR LEU ALA GLY GLY SER LEU SEQRES 9 B 300 THR ASP VAL VAL THR GLU THR CYS MET ASP GLU GLY GLN SEQRES 10 B 300 ILE ALA ALA VAL CYS ARG GLU CYS LEU GLN ALA LEU GLU SEQRES 11 B 300 PHE LEU HIS SER ASN GLN VAL ILE HIS ARG ASN ILE LYS SEQRES 12 B 300 SER ASP ASN ILE LEU LEU GLY MET ASP GLY SER VAL LYS SEQRES 13 B 300 LEU THR ASP PHE GLY PHE CYS ALA GLN ILE THR PRO GLU SEQRES 14 B 300 GLN SER LYS ARG SER GLU MET VAL GLY THR PRO TYR TRP SEQRES 15 B 300 MET ALA PRO GLU VAL VAL THR ARG LYS ALA TYR GLY PRO SEQRES 16 B 300 LYS VAL ASP ILE TRP SER LEU GLY ILE MET ALA ILE GLU SEQRES 17 B 300 MET ILE GLU GLY GLU PRO PRO TYR LEU ASN GLU ASN PRO SEQRES 18 B 300 LEU ARG ALA LEU TYR LEU ILE ALA THR ASN GLY THR PRO SEQRES 19 B 300 GLU LEU GLN ASN PRO GLU LYS LEU SER ALA ILE PHE ARG SEQRES 20 B 300 ASP PHE LEU ASN ARG CYS LEU GLU MET ASP VAL GLU LYS SEQRES 21 B 300 ARG GLY SER ALA LYS GLU LEU LEU GLN HIS GLN PHE LEU SEQRES 22 B 300 LYS ILE ALA LYS PRO LEU SER SER LEU THR PRO LEU ILE SEQRES 23 B 300 ALA ALA ALA LYS GLU ALA THR LYS ASN ASN HIS GLY ASN SEQRES 24 B 300 SER HET 6BZ A 601 32 HET 6BZ B 601 32 HETNAM 6BZ 8-(3-AMINOPROPYL)-6-[2-CHLORO-4-(3-METHYL-2-OXOPYRAZIN- HETNAM 2 6BZ 1(2H)-YL)PHENYL]-2-(METHYLAMINO)PYRIDO[2,3- HETNAM 3 6BZ D]PYRIMIDIN-7(8H)-ONE FORMUL 3 6BZ 2(C22 H22 CL N7 O2) FORMUL 5 HOH *182(H2 O) HELIX 1 AA1 GLU A 251 VAL A 261 1 11 HELIX 2 AA2 GLU A 310 GLU A 321 1 12 HELIX 3 AA3 LEU A 352 THR A 359 1 8 HELIX 4 AA4 ASP A 362 SER A 382 1 21 HELIX 5 AA5 LYS A 391 ASP A 393 5 3 HELIX 6 AA6 THR A 427 MET A 431 5 5 HELIX 7 AA7 ALA A 432 THR A 437 1 6 HELIX 8 AA8 LYS A 444 GLY A 460 1 17 HELIX 9 AA9 ASN A 468 GLY A 480 1 13 HELIX 10 AB1 ASN A 486 LEU A 490 5 5 HELIX 11 AB2 SER A 491 LEU A 502 1 12 HELIX 12 AB3 SER A 511 LEU A 516 1 6 HELIX 13 AB4 GLN A 517 ALA A 524 5 8 HELIX 14 AB5 PRO A 526 SER A 529 5 4 HELIX 15 AB6 LEU A 530 GLY A 546 1 17 HELIX 16 AB7 GLU B 251 VAL B 261 1 11 HELIX 17 AB8 ASP B 265 LYS B 269 1 5 HELIX 18 AB9 ILE B 313 ASN B 322 1 10 HELIX 19 AC1 SER B 351 THR B 359 1 9 HELIX 20 AC2 ASP B 362 ASN B 383 1 22 HELIX 21 AC3 LYS B 391 ASP B 393 5 3 HELIX 22 AC4 ALA B 432 THR B 437 1 6 HELIX 23 AC5 PRO B 443 GLY B 460 1 18 HELIX 24 AC6 ASN B 468 ASN B 479 1 12 HELIX 25 AC7 ASN B 486 LEU B 490 5 5 HELIX 26 AC8 SER B 491 LEU B 502 1 12 HELIX 27 AC9 SER B 511 LEU B 516 1 6 HELIX 28 AD1 GLN B 517 ALA B 524 5 8 HELIX 29 AD2 PRO B 526 SER B 529 5 4 HELIX 30 AD3 LEU B 530 THR B 541 1 12 SHEET 1 AA1 4 THR A 283 ALA A 287 0 SHEET 2 AA1 4 VAL A 296 MET A 301 -1 O ILE A 298 N TYR A 285 SHEET 3 AA1 4 LEU A 340 GLU A 345 -1 O MET A 344 N ALA A 297 SHEET 4 AA1 4 TYR A 330 TYR A 334 -1 N TYR A 334 O TRP A 341 SHEET 1 AA2 3 GLY A 350 SER A 351 0 SHEET 2 AA2 3 ILE A 395 LEU A 397 -1 O LEU A 397 N GLY A 350 SHEET 3 AA2 3 VAL A 403 LEU A 405 -1 O LYS A 404 N LEU A 396 SHEET 1 AA3 2 VAL A 385 ILE A 386 0 SHEET 2 AA3 2 ALA A 412 GLN A 413 -1 O ALA A 412 N ILE A 386 SHEET 1 AA4 5 TYR B 270 GLY B 277 0 SHEET 2 AA4 5 THR B 283 ASP B 289 -1 O VAL B 284 N ILE B 276 SHEET 3 AA4 5 GLU B 295 MET B 301 -1 O ILE B 298 N TYR B 285 SHEET 4 AA4 5 GLU B 339 GLU B 345 -1 O MET B 344 N ALA B 297 SHEET 5 AA4 5 TYR B 330 VAL B 336 -1 N TYR B 334 O TRP B 341 SHEET 1 AA5 2 ILE B 395 LEU B 397 0 SHEET 2 AA5 2 VAL B 403 LEU B 405 -1 O LYS B 404 N LEU B 396 CISPEP 1 GLN A 278 GLY A 279 0 0.01 CISPEP 2 SER A 281 GLY A 282 0 -0.73 CISPEP 3 GLY B 279 ALA B 280 0 1.18 CISPEP 4 ALA B 280 SER B 281 0 0.17 SITE 1 AC1 12 ALA A 297 LYS A 299 GLU A 315 ILE A 316 SITE 2 AC1 12 VAL A 342 MET A 344 GLU A 345 TYR A 346 SITE 3 AC1 12 LEU A 347 LEU A 396 THR A 406 ASP A 407 SITE 1 AC2 11 ALA B 297 LYS B 299 VAL B 342 MET B 344 SITE 2 AC2 11 GLU B 345 TYR B 346 LEU B 347 LEU B 396 SITE 3 AC2 11 THR B 406 ASP B 407 HOH B 749 CRYST1 60.480 82.820 65.890 90.00 106.71 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016534 0.000000 0.004964 0.00000 SCALE2 0.000000 0.012074 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015846 0.00000