HEADER MEMBRANE PROTEIN 17-MAR-16 5ITP TITLE STRUCTURE OF THE PERIPLASMIC BINDING PROTEIN NOCT FROM A.TUMEFACIENS TITLE 2 IN COMPLEX WITH OCTOPINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOPALINE-BINDING PERIPLASMIC PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM FABRUM; SOURCE 3 ORGANISM_TAXID: 358; SOURCE 4 GENE: NOCT, ATU6027, AGR_PTI_67; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PERIPLASMIC BINDING PROTEIN, OPINE, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.VIGOUROUX,S.MORERA REVDAT 4 10-JAN-24 5ITP 1 REMARK REVDAT 3 06-SEP-17 5ITP 1 ATOM REVDAT 2 01-FEB-17 5ITP 1 JRNL REVDAT 1 30-NOV-16 5ITP 0 JRNL AUTH J.LANG,A.VIGOUROUX,A.EL SAHILI,A.KWASIBORSKI, JRNL AUTH 2 M.AUMONT-NICAISE,Y.DESSAUX,J.A.SHYKOFF,S.MORERA,D.FAURE JRNL TITL FITNESS COSTS RESTRICT NICHE EXPANSION BY GENERALIST JRNL TITL 2 NICHE-CONSTRUCTING PATHOGENS. JRNL REF ISME J V. 11 374 2017 JRNL REFN ESSN 1751-7370 JRNL PMID 27801902 JRNL DOI 10.1038/ISMEJ.2016.137 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 47656 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2383 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.90 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.75 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 3435 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2635 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3263 REMARK 3 BIN R VALUE (WORKING SET) : 0.2629 REMARK 3 BIN FREE R VALUE : 0.2752 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.01 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 172 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3898 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 69 REMARK 3 SOLVENT ATOMS : 257 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 34.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.04850 REMARK 3 B22 (A**2) : 1.04850 REMARK 3 B33 (A**2) : -2.09700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.258 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.119 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.106 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.121 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.107 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4037 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5432 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1410 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 98 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 576 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4037 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 537 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4970 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.02 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.10 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.21 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -16.3877 80.4825 0.1882 REMARK 3 T TENSOR REMARK 3 T11: -0.0922 T22: -0.0764 REMARK 3 T33: -0.0599 T12: 0.0390 REMARK 3 T13: -0.0131 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 1.0399 L22: 1.3186 REMARK 3 L33: 1.0678 L12: 0.0485 REMARK 3 L13: -0.4400 L23: -0.3351 REMARK 3 S TENSOR REMARK 3 S11: -0.0191 S12: -0.0029 S13: 0.0422 REMARK 3 S21: 0.0550 S22: 0.0781 S23: 0.2150 REMARK 3 S31: -0.0228 S32: -0.1302 S33: -0.0591 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -27.9054 113.5444 11.8312 REMARK 3 T TENSOR REMARK 3 T11: -0.0098 T22: -0.1440 REMARK 3 T33: -0.1515 T12: 0.1042 REMARK 3 T13: 0.0097 T23: -0.0453 REMARK 3 L TENSOR REMARK 3 L11: 2.0627 L22: 1.9868 REMARK 3 L33: 1.3840 L12: -0.0697 REMARK 3 L13: -0.2129 L23: 0.1979 REMARK 3 S TENSOR REMARK 3 S11: 0.0360 S12: -0.1438 S13: -0.0468 REMARK 3 S21: 0.1035 S22: -0.0959 S23: 0.1491 REMARK 3 S31: -0.1378 S32: 0.1798 S33: 0.0599 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5ITP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219402. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47709 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 49.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.84000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4POX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG 4K, 100 MM TRIS PH 8.5 AND 0.1 REMARK 280 MM LISO4, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.38667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 12.69333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 25 REMARK 465 LYS A 26 REMARK 465 ASP A 27 REMARK 465 LYS A 282 REMARK 465 GLN A 283 REMARK 465 HIS A 284 REMARK 465 HIS A 285 REMARK 465 HIS A 286 REMARK 465 HIS A 287 REMARK 465 HIS A 288 REMARK 465 HIS A 289 REMARK 465 MET B 25 REMARK 465 LYS B 26 REMARK 465 ASP B 27 REMARK 465 LYS B 282 REMARK 465 GLN B 283 REMARK 465 HIS B 284 REMARK 465 HIS B 285 REMARK 465 HIS B 286 REMARK 465 HIS B 287 REMARK 465 HIS B 288 REMARK 465 HIS B 289 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 94 49.98 -147.69 REMARK 500 ALA B 94 50.25 -147.17 REMARK 500 ILE B 142 109.07 -58.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6DB A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6DB B 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4P0I RELATED DB: PDB REMARK 900 4P0I CONTAINS THE FREE-LIGANDED PROTEIN 4POX CONTAINS THE SAME REMARK 900 PROTEIN COMPLEXED WITH NOPALINE 4P0W CONTAINS THE SAME PROTEIN REMARK 900 COMPLEXES WITH PYRONOPALINE 4PP0 CONTAINS A POINT MUTANT COMPLEXED REMARK 900 WITH PYRONOPALINE DBREF 5ITP A 26 283 UNP P35120 NOCT_AGRFC 26 283 DBREF 5ITP B 26 283 UNP P35120 NOCT_AGRFC 26 283 SEQADV 5ITP MET A 25 UNP P35120 INITIATING METHIONINE SEQADV 5ITP HIS A 284 UNP P35120 EXPRESSION TAG SEQADV 5ITP HIS A 285 UNP P35120 EXPRESSION TAG SEQADV 5ITP HIS A 286 UNP P35120 EXPRESSION TAG SEQADV 5ITP HIS A 287 UNP P35120 EXPRESSION TAG SEQADV 5ITP HIS A 288 UNP P35120 EXPRESSION TAG SEQADV 5ITP HIS A 289 UNP P35120 EXPRESSION TAG SEQADV 5ITP MET B 25 UNP P35120 INITIATING METHIONINE SEQADV 5ITP HIS B 284 UNP P35120 EXPRESSION TAG SEQADV 5ITP HIS B 285 UNP P35120 EXPRESSION TAG SEQADV 5ITP HIS B 286 UNP P35120 EXPRESSION TAG SEQADV 5ITP HIS B 287 UNP P35120 EXPRESSION TAG SEQADV 5ITP HIS B 288 UNP P35120 EXPRESSION TAG SEQADV 5ITP HIS B 289 UNP P35120 EXPRESSION TAG SEQRES 1 A 265 MET LYS ASP TYR LYS SER ILE THR ILE ALA THR GLU GLY SEQRES 2 A 265 SER TYR ALA PRO TYR ASN PHE LYS ASP ALA GLY GLY LYS SEQRES 3 A 265 LEU ILE GLY PHE ASP ILE ASP LEU GLY ASN ASP LEU CYS SEQRES 4 A 265 LYS ARG MET ASN ILE GLU CYS LYS PHE VAL GLU GLN ALA SEQRES 5 A 265 TRP ASP GLY ILE ILE PRO SER LEU THR ALA GLY ARG TYR SEQRES 6 A 265 ASP ALA ILE MET ALA ALA MET GLY ILE GLN PRO ALA ARG SEQRES 7 A 265 GLU LYS VAL ILE ALA PHE SER ARG PRO TYR LEU LEU THR SEQRES 8 A 265 PRO MET THR PHE LEU THR THR ALA ASP SER PRO LEU LEU SEQRES 9 A 265 LYS THR GLN VAL ALA ILE GLU ASN LEU PRO LEU ASP ASN SEQRES 10 A 265 ILE THR PRO GLU GLN LYS ALA GLU LEU ASP LYS PHE THR SEQRES 11 A 265 LYS ILE PHE GLU GLY VAL LYS PHE GLY VAL GLN ALA GLY SEQRES 12 A 265 THR SER HIS GLU ALA PHE MET LYS GLN MET MET PRO SER SEQRES 13 A 265 VAL GLN ILE SER THR TYR ASP THR ILE ASP ASN VAL VAL SEQRES 14 A 265 MET ASP LEU LYS ALA GLY ARG ILE ASP ALA SER LEU ALA SEQRES 15 A 265 SER VAL SER PHE LEU LYS PRO LEU THR ASP LYS PRO ASP SEQRES 16 A 265 ASN LYS ASP LEU LYS MET PHE GLY PRO ARG MET THR GLY SEQRES 17 A 265 GLY LEU PHE GLY LYS GLY VAL GLY VAL GLY ILE ARG LYS SEQRES 18 A 265 GLU ASP ALA ASP LEU LYS ALA LEU PHE ASP LYS ALA ILE SEQRES 19 A 265 ASP ALA ALA ILE ALA ASP GLY THR VAL GLN LYS LEU SER SEQRES 20 A 265 GLN GLN TRP PHE GLY TYR ASP ALA SER PRO LYS GLN HIS SEQRES 21 A 265 HIS HIS HIS HIS HIS SEQRES 1 B 265 MET LYS ASP TYR LYS SER ILE THR ILE ALA THR GLU GLY SEQRES 2 B 265 SER TYR ALA PRO TYR ASN PHE LYS ASP ALA GLY GLY LYS SEQRES 3 B 265 LEU ILE GLY PHE ASP ILE ASP LEU GLY ASN ASP LEU CYS SEQRES 4 B 265 LYS ARG MET ASN ILE GLU CYS LYS PHE VAL GLU GLN ALA SEQRES 5 B 265 TRP ASP GLY ILE ILE PRO SER LEU THR ALA GLY ARG TYR SEQRES 6 B 265 ASP ALA ILE MET ALA ALA MET GLY ILE GLN PRO ALA ARG SEQRES 7 B 265 GLU LYS VAL ILE ALA PHE SER ARG PRO TYR LEU LEU THR SEQRES 8 B 265 PRO MET THR PHE LEU THR THR ALA ASP SER PRO LEU LEU SEQRES 9 B 265 LYS THR GLN VAL ALA ILE GLU ASN LEU PRO LEU ASP ASN SEQRES 10 B 265 ILE THR PRO GLU GLN LYS ALA GLU LEU ASP LYS PHE THR SEQRES 11 B 265 LYS ILE PHE GLU GLY VAL LYS PHE GLY VAL GLN ALA GLY SEQRES 12 B 265 THR SER HIS GLU ALA PHE MET LYS GLN MET MET PRO SER SEQRES 13 B 265 VAL GLN ILE SER THR TYR ASP THR ILE ASP ASN VAL VAL SEQRES 14 B 265 MET ASP LEU LYS ALA GLY ARG ILE ASP ALA SER LEU ALA SEQRES 15 B 265 SER VAL SER PHE LEU LYS PRO LEU THR ASP LYS PRO ASP SEQRES 16 B 265 ASN LYS ASP LEU LYS MET PHE GLY PRO ARG MET THR GLY SEQRES 17 B 265 GLY LEU PHE GLY LYS GLY VAL GLY VAL GLY ILE ARG LYS SEQRES 18 B 265 GLU ASP ALA ASP LEU LYS ALA LEU PHE ASP LYS ALA ILE SEQRES 19 B 265 ASP ALA ALA ILE ALA ASP GLY THR VAL GLN LYS LEU SER SEQRES 20 B 265 GLN GLN TRP PHE GLY TYR ASP ALA SER PRO LYS GLN HIS SEQRES 21 B 265 HIS HIS HIS HIS HIS HET 6DB A 301 17 HET EDO A 302 4 HET EDO A 303 4 HET EDO A 304 4 HET EDO A 305 4 HET EDO A 306 4 HET EDO A 307 4 HET EDO A 308 4 HET PEG A 309 7 HET 6DB B 301 17 HETNAM 6DB OCTOPINE HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 3 6DB 2(C9 H18 N4 O4) FORMUL 4 EDO 7(C2 H6 O2) FORMUL 11 PEG C4 H10 O3 FORMUL 13 HOH *257(H2 O) HELIX 1 AA1 GLY A 53 ASN A 67 1 15 HELIX 2 AA2 GLY A 79 ALA A 86 1 8 HELIX 3 AA3 GLN A 99 LYS A 104 1 6 HELIX 4 AA4 SER A 125 THR A 130 5 6 HELIX 5 AA5 THR A 143 PHE A 157 1 15 HELIX 6 AA6 THR A 168 MET A 178 1 11 HELIX 7 AA7 THR A 188 ALA A 198 1 11 HELIX 8 AA8 VAL A 208 LYS A 217 1 10 HELIX 9 AA9 PRO A 218 LYS A 221 5 4 HELIX 10 AB1 GLY A 232 GLY A 236 5 5 HELIX 11 AB2 ASP A 247 ASP A 264 1 18 HELIX 12 AB3 GLY A 265 GLY A 276 1 12 HELIX 13 AB4 GLY B 53 ASN B 67 1 15 HELIX 14 AB5 GLY B 79 ALA B 86 1 8 HELIX 15 AB6 GLN B 99 LYS B 104 1 6 HELIX 16 AB7 SER B 125 THR B 130 5 6 HELIX 17 AB8 THR B 143 GLU B 158 1 16 HELIX 18 AB9 THR B 168 MET B 178 1 11 HELIX 19 AC1 THR B 188 ALA B 198 1 11 HELIX 20 AC2 VAL B 208 LYS B 217 1 10 HELIX 21 AC3 PRO B 218 LYS B 221 5 4 HELIX 22 AC4 GLY B 232 GLY B 236 5 5 HELIX 23 AC5 ASP B 247 ASP B 264 1 18 HELIX 24 AC6 GLY B 265 GLY B 276 1 12 SHEET 1 AA1 3 GLU A 69 GLU A 74 0 SHEET 2 AA1 3 SER A 30 THR A 35 1 N ILE A 33 O LYS A 71 SHEET 3 AA1 3 ALA A 91 ILE A 92 1 O ALA A 91 N ALA A 34 SHEET 1 AA2 2 PHE A 44 LYS A 45 0 SHEET 2 AA2 2 LEU A 51 ILE A 52 -1 O ILE A 52 N PHE A 44 SHEET 1 AA3 2 ALA A 107 PHE A 108 0 SHEET 2 AA3 2 GLY A 242 ILE A 243 -1 O ILE A 243 N ALA A 107 SHEET 1 AA4 6 ASN A 136 PRO A 138 0 SHEET 2 AA4 6 LEU A 223 THR A 231 1 O ARG A 229 N LEU A 137 SHEET 3 AA4 6 MET A 117 THR A 122 -1 N MET A 117 O MET A 230 SHEET 4 AA4 6 ALA A 203 SER A 207 -1 O ALA A 206 N THR A 118 SHEET 5 AA4 6 PHE A 162 GLN A 165 1 N GLY A 163 O ALA A 203 SHEET 6 AA4 6 ILE A 183 TYR A 186 1 O SER A 184 N VAL A 164 SHEET 1 AA5 3 GLU B 69 GLU B 74 0 SHEET 2 AA5 3 SER B 30 THR B 35 1 N ILE B 33 O LYS B 71 SHEET 3 AA5 3 ALA B 91 ILE B 92 1 O ALA B 91 N ALA B 34 SHEET 1 AA6 2 PHE B 44 LYS B 45 0 SHEET 2 AA6 2 LEU B 51 ILE B 52 -1 O ILE B 52 N PHE B 44 SHEET 1 AA7 2 ALA B 107 PHE B 108 0 SHEET 2 AA7 2 GLY B 242 ILE B 243 -1 O ILE B 243 N ALA B 107 SHEET 1 AA8 4 ASN B 136 PRO B 138 0 SHEET 2 AA8 4 LEU B 223 THR B 231 1 O ARG B 229 N LEU B 137 SHEET 3 AA8 4 MET B 117 THR B 122 -1 N MET B 117 O MET B 230 SHEET 4 AA8 4 ALA B 203 SER B 207 -1 O ALA B 206 N THR B 118 SHEET 1 AA9 2 PHE B 162 GLN B 165 0 SHEET 2 AA9 2 ILE B 183 TYR B 186 1 O SER B 184 N PHE B 162 CISPEP 1 ALA A 40 PRO A 41 0 2.96 CISPEP 2 ALA B 40 PRO B 41 0 2.26 SITE 1 AC1 16 GLU A 36 TYR A 39 TYR A 42 TRP A 77 SITE 2 AC1 16 ALA A 94 ALA A 95 GLY A 97 ARG A 102 SITE 3 AC1 16 MET A 117 GLN A 165 THR A 168 SER A 169 SITE 4 AC1 16 HIS A 170 SER A 207 VAL A 239 HOH A 416 SITE 1 AC2 5 LYS A 104 THR A 143 PRO A 144 GLU A 145 SITE 2 AC2 5 HOH A 409 SITE 1 AC3 3 LYS A 104 LYS A 175 HOH A 459 SITE 1 AC4 4 ILE A 81 PRO A 144 HOH A 409 HOH A 449 SITE 1 AC5 5 PRO A 138 ASN A 141 THR A 143 GLN A 146 SITE 2 AC5 5 HOH A 512 SITE 1 AC6 6 ALA A 133 ILE A 134 GLU A 135 ASN A 136 SITE 2 AC6 6 EDO A 307 HOH A 451 SITE 1 AC7 4 TYR A 186 ASP A 187 ASN A 191 EDO A 306 SITE 1 AC8 3 ALA A 86 GLY A 87 HOH A 455 SITE 1 AC9 7 LEU A 114 THR A 115 THR A 231 GLY A 238 SITE 2 AC9 7 HOH A 433 HOH A 474 HOH A 486 SITE 1 AD1 16 GLU B 36 TYR B 39 TYR B 42 TRP B 77 SITE 2 AD1 16 ALA B 94 ALA B 95 GLY B 97 ARG B 102 SITE 3 AD1 16 MET B 117 GLN B 165 THR B 168 SER B 169 SITE 4 AD1 16 HIS B 170 SER B 207 VAL B 239 HOH B 415 CRYST1 114.640 114.640 38.080 90.00 90.00 120.00 P 32 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008723 0.005036 0.000000 0.00000 SCALE2 0.000000 0.010072 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026261 0.00000