HEADER HYDROLASE 17-MAR-16 5IUF TITLE BACILLUS NANORNASE A ACTIVE SITE MUTANT BOUND TO PAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIFUNCTIONAL OLIGORIBONUCLEASE AND PAP PHOSPHATASE NRNA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: 3'(2'),5'-BISPHOSPHATE NUCLEOTIDASE,3'-PHOSPHOADENOSINE 5'- COMPND 5 PHOSPHATE PHOSPHATASE,PAP PHOSPHATASE,NANORNASE; COMPND 6 EC: 3.1.3.7; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS (STRAIN 168); SOURCE 3 ORGANISM_TAXID: 224308; SOURCE 4 STRAIN: 168; SOURCE 5 GENE: NRNA, YTQI, BSU29250; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 STAR (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28B-TEV KEYWDS NANORNA; RNA DEGRADATION; EXONUCLEASE; RNASE; B. SUBTILIS; X-RAY; KEYWDS 2 ABORTIVE TRANSCRIPTS; PAP PHOSPHATASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.J.SCHMIER,C.M.NELERSA,A.MALHOTRA REVDAT 5 27-SEP-23 5IUF 1 REMARK REVDAT 4 25-DEC-19 5IUF 1 REMARK REVDAT 3 13-FEB-19 5IUF 1 JRNL REMARK REVDAT 2 13-SEP-17 5IUF 1 REMARK REVDAT 1 02-AUG-17 5IUF 0 JRNL AUTH B.J.SCHMIER,C.M.NELERSA,A.MALHOTRA JRNL TITL STRUCTURAL BASIS FOR THE BIDIRECTIONAL ACTIVITY OF BACILLUS JRNL TITL 2 NANORNASE NRNA. JRNL REF SCI REP V. 7 11085 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28894100 JRNL DOI 10.1038/S41598-017-09403-X REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.62 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 3 NUMBER OF REFLECTIONS : 100934 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5300 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6045 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 79.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.3020 REMARK 3 BIN FREE R VALUE SET COUNT : 300 REMARK 3 BIN FREE R VALUE : 0.3160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 9896 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.17000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.17000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.150 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.141 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.120 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.597 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 10036 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 9336 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 13632 ; 1.891 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 21480 ; 1.079 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1250 ; 5.949 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 449 ;37.207 ;24.477 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1643 ;14.896 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 50 ;18.469 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1529 ; 0.119 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 11374 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2262 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5024 ; 2.748 ; 3.169 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 5023 ; 2.748 ; 3.169 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6266 ; 3.624 ; 4.734 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 6267 ; 3.625 ; 4.734 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 5012 ; 3.560 ; 3.514 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 5010 ; 3.555 ; 3.513 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 7364 ; 5.249 ; 5.142 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 12002 ; 6.828 ;26.717 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 11728 ; 6.685 ;26.335 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5IUF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219231. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5-5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 107136 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.950 REMARK 200 RESOLUTION RANGE LOW (A) : 46.620 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.8800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5IPP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG MME 2000, SODIUM ACETATE, AMMONIUM REMARK 280 ACETATE, GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 60.62950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 GLU A -10 REMARK 465 ASN A -9 REMARK 465 LEU A -8 REMARK 465 TYR A -7 REMARK 465 PHE A -6 REMARK 465 GLN A -5 REMARK 465 SER A -4 REMARK 465 HIS A 312 REMARK 465 GLU A 313 REMARK 465 MET B -20 REMARK 465 GLY B -19 REMARK 465 SER B -18 REMARK 465 SER B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 GLU B -10 REMARK 465 ASN B -9 REMARK 465 LEU B -8 REMARK 465 TYR B -7 REMARK 465 PHE B -6 REMARK 465 GLN B -5 REMARK 465 HIS B 312 REMARK 465 GLU B 313 REMARK 465 MET C -20 REMARK 465 GLY C -19 REMARK 465 SER C -18 REMARK 465 SER C -17 REMARK 465 HIS C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 GLU C -10 REMARK 465 ASN C -9 REMARK 465 LEU C -8 REMARK 465 TYR C -7 REMARK 465 PHE C -6 REMARK 465 GLN C -5 REMARK 465 SER C -4 REMARK 465 HIS C 312 REMARK 465 GLU C 313 REMARK 465 MET D -20 REMARK 465 GLY D -19 REMARK 465 SER D -18 REMARK 465 SER D -17 REMARK 465 HIS D -16 REMARK 465 HIS D -15 REMARK 465 HIS D -14 REMARK 465 HIS D -13 REMARK 465 HIS D -12 REMARK 465 HIS D -11 REMARK 465 GLU D -10 REMARK 465 ASN D -9 REMARK 465 LEU D -8 REMARK 465 TYR D -7 REMARK 465 PHE D -6 REMARK 465 GLN D -5 REMARK 465 HIS D 312 REMARK 465 GLU D 313 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 44 CG CD OE1 OE2 REMARK 480 GLU A 69 CG CD REMARK 480 GLU A 72 CG CD OE1 OE2 REMARK 480 ARG A 86 CD NE CZ NH1 NH2 REMARK 480 LYS A 135 NZ REMARK 480 LYS A 140 CD CE NZ REMARK 480 ILE A 177 CD1 REMARK 480 GLU A 212 CG CD OE1 OE2 REMARK 480 LYS A 222 CG CD CE NZ REMARK 480 GLU A 226 CD OE1 OE2 REMARK 480 LYS A 227 CD CE NZ REMARK 480 GLN A 260 CD OE1 NE2 REMARK 480 ASN A 273 OD1 ND2 REMARK 480 LYS A 310 NZ REMARK 480 LYS B 135 CD CE NZ REMARK 480 LYS B 140 NZ REMARK 480 GLU B 167 CD OE1 OE2 REMARK 480 SER B 184 OG REMARK 480 GLU B 185 CG CD OE1 OE2 REMARK 480 LYS B 194 CG CD CE NZ REMARK 480 GLU B 212 CG CD OE1 OE2 REMARK 480 LYS B 222 CG CD CE NZ REMARK 480 ASP B 259 CB CG OD1 OD2 REMARK 480 LYS B 268 CE NZ REMARK 480 LYS B 310 CE NZ REMARK 480 GLU B 311 CG CD OE1 OE2 REMARK 480 SER C -1 OG REMARK 480 ARG C 22 CG CD NE CZ NH1 NH2 REMARK 480 GLU C 69 CG CD OE1 OE2 REMARK 480 GLU C 167 OE1 OE2 REMARK 480 GLU C 185 CG CD OE1 OE2 REMARK 480 GLU C 212 CG CD OE1 OE2 REMARK 480 GLN C 237 NE2 REMARK 480 LYS C 310 CD CE NZ REMARK 480 GLU C 311 CD OE1 OE2 REMARK 480 SER D -1 OG REMARK 480 GLU D 65 OE2 REMARK 480 GLU D 69 CG REMARK 480 GLU D 107 CD OE1 OE2 REMARK 480 LYS D 140 CE NZ REMARK 480 GLU D 167 CD OE1 OE2 REMARK 480 LYS D 171 NZ REMARK 480 LYS D 199 NZ REMARK 480 LYS D 310 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU C 167 O HOH C 401 1.48 REMARK 500 CG GLU A 44 O HOH A 509 1.49 REMARK 500 O HOH A 602 O HOH A 666 1.99 REMARK 500 O HOH C 458 O HOH C 576 2.02 REMARK 500 CD GLU A 44 O HOH A 509 2.05 REMARK 500 O HOH B 516 O HOH B 620 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD GLN A 178 OE1 GLU D 167 2646 1.70 REMARK 500 NE2 GLN A 178 OE1 GLU D 167 2646 1.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 22 63.38 64.53 REMARK 500 ASP A 89 105.39 70.08 REMARK 500 ASN A 273 -70.78 -43.92 REMARK 500 ARG B 22 64.61 62.74 REMARK 500 ASP B 89 100.83 83.34 REMARK 500 LYS B 278 -33.88 -37.78 REMARK 500 ASP C 89 102.09 80.47 REMARK 500 ARG C 159 41.24 70.70 REMARK 500 PHE C 160 33.15 74.66 REMARK 500 TYR C 279 33.28 -96.75 REMARK 500 TYR D 61 136.15 -176.48 REMARK 500 ASP D 89 103.56 72.86 REMARK 500 ARG D 91 -8.90 -53.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 VAL B 271 11.78 REMARK 500 SER C -1 -10.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 A3P A 402 REMARK 610 A3P B 402 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues A3P A 401 and A3P A REMARK 800 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues A3P B 401 and A3P B REMARK 800 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5IPP RELATED DB: PDB REMARK 900 STRUCTURE OF BACILLUS NANORNASE A ACTIVE SITE MUTANT BOUND TO A REMARK 900 MONONUCLEOTIDE DBREF 5IUF A 1 313 UNP O34600 NRNA_BACSU 1 313 DBREF 5IUF B 1 313 UNP O34600 NRNA_BACSU 1 313 DBREF 5IUF C 1 313 UNP O34600 NRNA_BACSU 1 313 DBREF 5IUF D 1 313 UNP O34600 NRNA_BACSU 1 313 SEQADV 5IUF MET A -20 UNP O34600 INITIATING METHIONINE SEQADV 5IUF GLY A -19 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER A -18 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER A -17 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS A -16 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS A -15 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS A -14 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS A -13 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS A -12 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS A -11 UNP O34600 EXPRESSION TAG SEQADV 5IUF GLU A -10 UNP O34600 EXPRESSION TAG SEQADV 5IUF ASN A -9 UNP O34600 EXPRESSION TAG SEQADV 5IUF LEU A -8 UNP O34600 EXPRESSION TAG SEQADV 5IUF TYR A -7 UNP O34600 EXPRESSION TAG SEQADV 5IUF PHE A -6 UNP O34600 EXPRESSION TAG SEQADV 5IUF GLN A -5 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER A -4 UNP O34600 EXPRESSION TAG SEQADV 5IUF MET A -3 UNP O34600 EXPRESSION TAG SEQADV 5IUF ALA A -2 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER A -1 UNP O34600 EXPRESSION TAG SEQADV 5IUF ALA A 103 UNP O34600 HIS 103 ENGINEERED MUTATION SEQADV 5IUF MET B -20 UNP O34600 INITIATING METHIONINE SEQADV 5IUF GLY B -19 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER B -18 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER B -17 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS B -16 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS B -15 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS B -14 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS B -13 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS B -12 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS B -11 UNP O34600 EXPRESSION TAG SEQADV 5IUF GLU B -10 UNP O34600 EXPRESSION TAG SEQADV 5IUF ASN B -9 UNP O34600 EXPRESSION TAG SEQADV 5IUF LEU B -8 UNP O34600 EXPRESSION TAG SEQADV 5IUF TYR B -7 UNP O34600 EXPRESSION TAG SEQADV 5IUF PHE B -6 UNP O34600 EXPRESSION TAG SEQADV 5IUF GLN B -5 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER B -4 UNP O34600 EXPRESSION TAG SEQADV 5IUF MET B -3 UNP O34600 EXPRESSION TAG SEQADV 5IUF ALA B -2 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER B -1 UNP O34600 EXPRESSION TAG SEQADV 5IUF ALA B 103 UNP O34600 HIS 103 ENGINEERED MUTATION SEQADV 5IUF MET C -20 UNP O34600 INITIATING METHIONINE SEQADV 5IUF GLY C -19 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER C -18 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER C -17 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS C -16 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS C -15 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS C -14 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS C -13 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS C -12 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS C -11 UNP O34600 EXPRESSION TAG SEQADV 5IUF GLU C -10 UNP O34600 EXPRESSION TAG SEQADV 5IUF ASN C -9 UNP O34600 EXPRESSION TAG SEQADV 5IUF LEU C -8 UNP O34600 EXPRESSION TAG SEQADV 5IUF TYR C -7 UNP O34600 EXPRESSION TAG SEQADV 5IUF PHE C -6 UNP O34600 EXPRESSION TAG SEQADV 5IUF GLN C -5 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER C -4 UNP O34600 EXPRESSION TAG SEQADV 5IUF MET C -3 UNP O34600 EXPRESSION TAG SEQADV 5IUF ALA C -2 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER C -1 UNP O34600 EXPRESSION TAG SEQADV 5IUF ALA C 103 UNP O34600 HIS 103 ENGINEERED MUTATION SEQADV 5IUF MET D -20 UNP O34600 INITIATING METHIONINE SEQADV 5IUF GLY D -19 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER D -18 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER D -17 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS D -16 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS D -15 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS D -14 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS D -13 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS D -12 UNP O34600 EXPRESSION TAG SEQADV 5IUF HIS D -11 UNP O34600 EXPRESSION TAG SEQADV 5IUF GLU D -10 UNP O34600 EXPRESSION TAG SEQADV 5IUF ASN D -9 UNP O34600 EXPRESSION TAG SEQADV 5IUF LEU D -8 UNP O34600 EXPRESSION TAG SEQADV 5IUF TYR D -7 UNP O34600 EXPRESSION TAG SEQADV 5IUF PHE D -6 UNP O34600 EXPRESSION TAG SEQADV 5IUF GLN D -5 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER D -4 UNP O34600 EXPRESSION TAG SEQADV 5IUF MET D -3 UNP O34600 EXPRESSION TAG SEQADV 5IUF ALA D -2 UNP O34600 EXPRESSION TAG SEQADV 5IUF SER D -1 UNP O34600 EXPRESSION TAG SEQADV 5IUF ALA D 103 UNP O34600 HIS 103 ENGINEERED MUTATION SEQRES 1 A 333 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLU ASN LEU SEQRES 2 A 333 TYR PHE GLN SER MET ALA SER MET LYS THR GLU LEU ILE SEQRES 3 A 333 ARG THR ILE SER LEU TYR ASP THR ILE ILE LEU HIS ARG SEQRES 4 A 333 HIS VAL ARG PRO ASP PRO ASP ALA TYR GLY SER GLN CYS SEQRES 5 A 333 GLY LEU THR GLU ILE LEU ARG GLU THR TYR PRO GLU LYS SEQRES 6 A 333 ASN ILE PHE ALA VAL GLY THR PRO GLU PRO SER LEU SER SEQRES 7 A 333 PHE LEU TYR SER LEU ASP GLU VAL ASP ASN GLU THR TYR SEQRES 8 A 333 GLU GLY ALA LEU VAL ILE VAL CYS ASP THR ALA ASN GLN SEQRES 9 A 333 GLU ARG ILE ASP ASP GLN ARG TYR PRO SER GLY ALA LYS SEQRES 10 A 333 LEU MET LYS ILE ASP ALA HIS PRO ASN GLU ASP PRO TYR SEQRES 11 A 333 GLY ASP LEU LEU TRP VAL ASP THR SER ALA SER SER VAL SEQRES 12 A 333 SER GLU MET ILE TYR GLU LEU TYR LEU GLU GLY LYS GLU SEQRES 13 A 333 HIS GLY TRP LYS LEU ASN THR LYS ALA ALA GLU LEU ILE SEQRES 14 A 333 TYR ALA GLY ILE VAL GLY ASP THR GLY ARG PHE LEU PHE SEQRES 15 A 333 PRO ASN THR THR GLU LYS THR LEU LYS TYR ALA GLY GLU SEQRES 16 A 333 LEU ILE GLN TYR PRO PHE SER SER SER GLU LEU PHE ASN SEQRES 17 A 333 GLN LEU TYR GLU THR LYS LEU ASN VAL VAL LYS LEU ASN SEQRES 18 A 333 GLY PHE ILE PHE GLN ASN VAL SER LEU SER GLU ASN GLY SEQRES 19 A 333 ALA ALA SER VAL PHE ILE LYS LYS ASP THR LEU GLU LYS SEQRES 20 A 333 PHE GLY THR THR ALA SER GLU ALA SER GLN LEU VAL GLY SEQRES 21 A 333 THR LEU GLY ASN ILE SER GLY ILE ARG ALA TRP VAL PHE SEQRES 22 A 333 PHE VAL GLU GLU ASP ASP GLN ILE ARG VAL ARG PHE ARG SEQRES 23 A 333 SER LYS GLY PRO VAL ILE ASN GLY LEU ALA ARG LYS TYR SEQRES 24 A 333 ASN GLY GLY GLY HIS PRO LEU ALA SER GLY ALA SER ILE SEQRES 25 A 333 TYR SER TRP ASP GLU ALA ASP ARG ILE LEU ALA ASP LEU SEQRES 26 A 333 GLU THR LEU CYS LYS GLU HIS GLU SEQRES 1 B 333 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLU ASN LEU SEQRES 2 B 333 TYR PHE GLN SER MET ALA SER MET LYS THR GLU LEU ILE SEQRES 3 B 333 ARG THR ILE SER LEU TYR ASP THR ILE ILE LEU HIS ARG SEQRES 4 B 333 HIS VAL ARG PRO ASP PRO ASP ALA TYR GLY SER GLN CYS SEQRES 5 B 333 GLY LEU THR GLU ILE LEU ARG GLU THR TYR PRO GLU LYS SEQRES 6 B 333 ASN ILE PHE ALA VAL GLY THR PRO GLU PRO SER LEU SER SEQRES 7 B 333 PHE LEU TYR SER LEU ASP GLU VAL ASP ASN GLU THR TYR SEQRES 8 B 333 GLU GLY ALA LEU VAL ILE VAL CYS ASP THR ALA ASN GLN SEQRES 9 B 333 GLU ARG ILE ASP ASP GLN ARG TYR PRO SER GLY ALA LYS SEQRES 10 B 333 LEU MET LYS ILE ASP ALA HIS PRO ASN GLU ASP PRO TYR SEQRES 11 B 333 GLY ASP LEU LEU TRP VAL ASP THR SER ALA SER SER VAL SEQRES 12 B 333 SER GLU MET ILE TYR GLU LEU TYR LEU GLU GLY LYS GLU SEQRES 13 B 333 HIS GLY TRP LYS LEU ASN THR LYS ALA ALA GLU LEU ILE SEQRES 14 B 333 TYR ALA GLY ILE VAL GLY ASP THR GLY ARG PHE LEU PHE SEQRES 15 B 333 PRO ASN THR THR GLU LYS THR LEU LYS TYR ALA GLY GLU SEQRES 16 B 333 LEU ILE GLN TYR PRO PHE SER SER SER GLU LEU PHE ASN SEQRES 17 B 333 GLN LEU TYR GLU THR LYS LEU ASN VAL VAL LYS LEU ASN SEQRES 18 B 333 GLY PHE ILE PHE GLN ASN VAL SER LEU SER GLU ASN GLY SEQRES 19 B 333 ALA ALA SER VAL PHE ILE LYS LYS ASP THR LEU GLU LYS SEQRES 20 B 333 PHE GLY THR THR ALA SER GLU ALA SER GLN LEU VAL GLY SEQRES 21 B 333 THR LEU GLY ASN ILE SER GLY ILE ARG ALA TRP VAL PHE SEQRES 22 B 333 PHE VAL GLU GLU ASP ASP GLN ILE ARG VAL ARG PHE ARG SEQRES 23 B 333 SER LYS GLY PRO VAL ILE ASN GLY LEU ALA ARG LYS TYR SEQRES 24 B 333 ASN GLY GLY GLY HIS PRO LEU ALA SER GLY ALA SER ILE SEQRES 25 B 333 TYR SER TRP ASP GLU ALA ASP ARG ILE LEU ALA ASP LEU SEQRES 26 B 333 GLU THR LEU CYS LYS GLU HIS GLU SEQRES 1 C 333 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLU ASN LEU SEQRES 2 C 333 TYR PHE GLN SER MET ALA SER MET LYS THR GLU LEU ILE SEQRES 3 C 333 ARG THR ILE SER LEU TYR ASP THR ILE ILE LEU HIS ARG SEQRES 4 C 333 HIS VAL ARG PRO ASP PRO ASP ALA TYR GLY SER GLN CYS SEQRES 5 C 333 GLY LEU THR GLU ILE LEU ARG GLU THR TYR PRO GLU LYS SEQRES 6 C 333 ASN ILE PHE ALA VAL GLY THR PRO GLU PRO SER LEU SER SEQRES 7 C 333 PHE LEU TYR SER LEU ASP GLU VAL ASP ASN GLU THR TYR SEQRES 8 C 333 GLU GLY ALA LEU VAL ILE VAL CYS ASP THR ALA ASN GLN SEQRES 9 C 333 GLU ARG ILE ASP ASP GLN ARG TYR PRO SER GLY ALA LYS SEQRES 10 C 333 LEU MET LYS ILE ASP ALA HIS PRO ASN GLU ASP PRO TYR SEQRES 11 C 333 GLY ASP LEU LEU TRP VAL ASP THR SER ALA SER SER VAL SEQRES 12 C 333 SER GLU MET ILE TYR GLU LEU TYR LEU GLU GLY LYS GLU SEQRES 13 C 333 HIS GLY TRP LYS LEU ASN THR LYS ALA ALA GLU LEU ILE SEQRES 14 C 333 TYR ALA GLY ILE VAL GLY ASP THR GLY ARG PHE LEU PHE SEQRES 15 C 333 PRO ASN THR THR GLU LYS THR LEU LYS TYR ALA GLY GLU SEQRES 16 C 333 LEU ILE GLN TYR PRO PHE SER SER SER GLU LEU PHE ASN SEQRES 17 C 333 GLN LEU TYR GLU THR LYS LEU ASN VAL VAL LYS LEU ASN SEQRES 18 C 333 GLY PHE ILE PHE GLN ASN VAL SER LEU SER GLU ASN GLY SEQRES 19 C 333 ALA ALA SER VAL PHE ILE LYS LYS ASP THR LEU GLU LYS SEQRES 20 C 333 PHE GLY THR THR ALA SER GLU ALA SER GLN LEU VAL GLY SEQRES 21 C 333 THR LEU GLY ASN ILE SER GLY ILE ARG ALA TRP VAL PHE SEQRES 22 C 333 PHE VAL GLU GLU ASP ASP GLN ILE ARG VAL ARG PHE ARG SEQRES 23 C 333 SER LYS GLY PRO VAL ILE ASN GLY LEU ALA ARG LYS TYR SEQRES 24 C 333 ASN GLY GLY GLY HIS PRO LEU ALA SER GLY ALA SER ILE SEQRES 25 C 333 TYR SER TRP ASP GLU ALA ASP ARG ILE LEU ALA ASP LEU SEQRES 26 C 333 GLU THR LEU CYS LYS GLU HIS GLU SEQRES 1 D 333 MET GLY SER SER HIS HIS HIS HIS HIS HIS GLU ASN LEU SEQRES 2 D 333 TYR PHE GLN SER MET ALA SER MET LYS THR GLU LEU ILE SEQRES 3 D 333 ARG THR ILE SER LEU TYR ASP THR ILE ILE LEU HIS ARG SEQRES 4 D 333 HIS VAL ARG PRO ASP PRO ASP ALA TYR GLY SER GLN CYS SEQRES 5 D 333 GLY LEU THR GLU ILE LEU ARG GLU THR TYR PRO GLU LYS SEQRES 6 D 333 ASN ILE PHE ALA VAL GLY THR PRO GLU PRO SER LEU SER SEQRES 7 D 333 PHE LEU TYR SER LEU ASP GLU VAL ASP ASN GLU THR TYR SEQRES 8 D 333 GLU GLY ALA LEU VAL ILE VAL CYS ASP THR ALA ASN GLN SEQRES 9 D 333 GLU ARG ILE ASP ASP GLN ARG TYR PRO SER GLY ALA LYS SEQRES 10 D 333 LEU MET LYS ILE ASP ALA HIS PRO ASN GLU ASP PRO TYR SEQRES 11 D 333 GLY ASP LEU LEU TRP VAL ASP THR SER ALA SER SER VAL SEQRES 12 D 333 SER GLU MET ILE TYR GLU LEU TYR LEU GLU GLY LYS GLU SEQRES 13 D 333 HIS GLY TRP LYS LEU ASN THR LYS ALA ALA GLU LEU ILE SEQRES 14 D 333 TYR ALA GLY ILE VAL GLY ASP THR GLY ARG PHE LEU PHE SEQRES 15 D 333 PRO ASN THR THR GLU LYS THR LEU LYS TYR ALA GLY GLU SEQRES 16 D 333 LEU ILE GLN TYR PRO PHE SER SER SER GLU LEU PHE ASN SEQRES 17 D 333 GLN LEU TYR GLU THR LYS LEU ASN VAL VAL LYS LEU ASN SEQRES 18 D 333 GLY PHE ILE PHE GLN ASN VAL SER LEU SER GLU ASN GLY SEQRES 19 D 333 ALA ALA SER VAL PHE ILE LYS LYS ASP THR LEU GLU LYS SEQRES 20 D 333 PHE GLY THR THR ALA SER GLU ALA SER GLN LEU VAL GLY SEQRES 21 D 333 THR LEU GLY ASN ILE SER GLY ILE ARG ALA TRP VAL PHE SEQRES 22 D 333 PHE VAL GLU GLU ASP ASP GLN ILE ARG VAL ARG PHE ARG SEQRES 23 D 333 SER LYS GLY PRO VAL ILE ASN GLY LEU ALA ARG LYS TYR SEQRES 24 D 333 ASN GLY GLY GLY HIS PRO LEU ALA SER GLY ALA SER ILE SEQRES 25 D 333 TYR SER TRP ASP GLU ALA ASP ARG ILE LEU ALA ASP LEU SEQRES 26 D 333 GLU THR LEU CYS LYS GLU HIS GLU HET A3P A 401 23 HET A3P A 402 4 HET A3P B 401 23 HET A3P B 402 4 HETNAM A3P ADENOSINE-3'-5'-DIPHOSPHATE FORMUL 5 A3P 4(C10 H15 N5 O10 P2) FORMUL 9 HOH *840(H2 O) HELIX 1 AA1 MET A -3 TYR A 12 1 15 HELIX 2 AA2 ASP A 24 TYR A 42 1 19 HELIX 3 AA3 GLU A 54 SER A 58 5 5 HELIX 4 AA4 ASP A 67 GLU A 72 1 6 HELIX 5 AA5 ASN A 83 ILE A 87 5 5 HELIX 6 AA6 ARG A 91 GLY A 95 5 5 HELIX 7 AA7 SER A 122 GLU A 136 1 15 HELIX 8 AA8 ASN A 142 GLY A 158 1 17 HELIX 9 AA9 THR A 166 GLN A 178 1 13 HELIX 10 AB1 SER A 182 GLU A 192 1 11 HELIX 11 AB2 LYS A 194 VAL A 208 1 15 HELIX 12 AB3 LYS A 221 GLY A 229 1 9 HELIX 13 AB4 THR A 231 GLN A 237 1 7 HELIX 14 AB5 LEU A 238 GLY A 243 5 6 HELIX 15 AB6 ILE A 272 TYR A 279 1 8 HELIX 16 AB7 SER A 294 GLU A 311 1 18 HELIX 17 AB8 MET B -3 TYR B 12 1 15 HELIX 18 AB9 ASP B 24 TYR B 42 1 19 HELIX 19 AC1 GLU B 54 SER B 58 5 5 HELIX 20 AC2 ASP B 67 GLU B 72 5 6 HELIX 21 AC3 ASN B 83 ILE B 87 5 5 HELIX 22 AC4 ARG B 91 GLY B 95 5 5 HELIX 23 AC5 SER B 122 LYS B 135 1 14 HELIX 24 AC6 GLU B 136 GLY B 138 5 3 HELIX 25 AC7 ASN B 142 THR B 157 1 16 HELIX 26 AC8 THR B 166 ILE B 177 1 12 HELIX 27 AC9 SER B 182 GLU B 192 1 11 HELIX 28 AD1 LYS B 194 VAL B 208 1 15 HELIX 29 AD2 LYS B 221 GLY B 229 1 9 HELIX 30 AD3 THR B 231 GLN B 237 1 7 HELIX 31 AD4 LEU B 238 GLY B 243 5 6 HELIX 32 AD5 ILE B 272 TYR B 279 1 8 HELIX 33 AD6 SER B 294 GLU B 311 1 18 HELIX 34 AD7 ALA C -2 TYR C 12 1 14 HELIX 35 AD8 ASP C 24 TYR C 42 1 19 HELIX 36 AD9 GLU C 54 SER C 58 5 5 HELIX 37 AE1 ASP C 67 GLU C 72 5 6 HELIX 38 AE2 ASN C 83 ILE C 87 5 5 HELIX 39 AE3 ARG C 91 GLY C 95 5 5 HELIX 40 AE4 SER C 122 LYS C 135 1 14 HELIX 41 AE5 GLU C 136 GLY C 138 5 3 HELIX 42 AE6 ASN C 142 THR C 157 1 16 HELIX 43 AE7 THR C 166 GLN C 178 1 13 HELIX 44 AE8 SER C 182 GLU C 192 1 11 HELIX 45 AE9 LYS C 194 VAL C 208 1 15 HELIX 46 AF1 LYS C 221 GLY C 229 1 9 HELIX 47 AF2 THR C 231 GLN C 237 1 7 HELIX 48 AF3 LEU C 238 GLY C 243 5 6 HELIX 49 AF4 ILE C 272 TYR C 279 1 8 HELIX 50 AF5 SER C 294 GLU C 311 1 18 HELIX 51 AF6 MET D -3 TYR D 12 1 15 HELIX 52 AF7 ASP D 24 TYR D 42 1 19 HELIX 53 AF8 LEU D 57 TYR D 61 5 5 HELIX 54 AF9 ASN D 68 GLU D 72 5 5 HELIX 55 AG1 SER D 122 LYS D 135 1 14 HELIX 56 AG2 GLU D 136 GLY D 138 5 3 HELIX 57 AG3 ASN D 142 GLY D 158 1 17 HELIX 58 AG4 THR D 166 GLN D 178 1 13 HELIX 59 AG5 SER D 182 GLU D 192 1 11 HELIX 60 AG6 LYS D 194 ASN D 207 1 14 HELIX 61 AG7 LYS D 221 GLY D 229 1 9 HELIX 62 AG8 THR D 231 GLN D 237 1 7 HELIX 63 AG9 LEU D 238 GLY D 243 5 6 HELIX 64 AH1 ILE D 272 TYR D 279 1 8 HELIX 65 AH2 SER D 294 GLU D 311 1 18 SHEET 1 AA1 5 ASN A 46 ALA A 49 0 SHEET 2 AA1 5 THR A 14 HIS A 18 1 N LEU A 17 O PHE A 48 SHEET 3 AA1 5 LEU A 75 CYS A 79 1 O CYS A 79 N HIS A 18 SHEET 4 AA1 5 LYS A 97 ASP A 102 1 O MET A 99 N VAL A 78 SHEET 5 AA1 5 LEU A 113 VAL A 116 1 O TRP A 115 N LYS A 100 SHEET 1 AA2 5 ALA A 215 ILE A 220 0 SHEET 2 AA2 5 ALA A 250 GLU A 256 1 O PHE A 254 N ILE A 220 SHEET 3 AA2 5 ILE A 261 SER A 267 -1 O ARG A 262 N VAL A 255 SHEET 4 AA2 5 ALA A 287 ILE A 292 -1 O ILE A 292 N ILE A 261 SHEET 5 AA2 5 GLY A 282 GLY A 283 -1 N GLY A 282 O GLY A 289 SHEET 1 AA3 5 ASN B 46 ALA B 49 0 SHEET 2 AA3 5 THR B 14 HIS B 18 1 N LEU B 17 O PHE B 48 SHEET 3 AA3 5 LEU B 75 CYS B 79 1 O CYS B 79 N HIS B 18 SHEET 4 AA3 5 LYS B 97 ASP B 102 1 O MET B 99 N VAL B 78 SHEET 5 AA3 5 LEU B 113 VAL B 116 1 O TRP B 115 N LYS B 100 SHEET 1 AA4 6 SER B 209 LEU B 210 0 SHEET 2 AA4 6 ALA B 215 ILE B 220 -1 O SER B 217 N SER B 209 SHEET 3 AA4 6 ALA B 250 GLU B 256 1 O PHE B 254 N ILE B 220 SHEET 4 AA4 6 ILE B 261 SER B 267 -1 O ARG B 266 N TRP B 251 SHEET 5 AA4 6 ALA B 287 ILE B 292 -1 O SER B 288 N PHE B 265 SHEET 6 AA4 6 GLY B 282 HIS B 284 -1 N HIS B 284 O ALA B 287 SHEET 1 AA5 5 ASN C 46 ALA C 49 0 SHEET 2 AA5 5 THR C 14 HIS C 18 1 N LEU C 17 O PHE C 48 SHEET 3 AA5 5 LEU C 75 CYS C 79 1 O CYS C 79 N HIS C 18 SHEET 4 AA5 5 LYS C 97 ASP C 102 1 O MET C 99 N VAL C 76 SHEET 5 AA5 5 LEU C 113 VAL C 116 1 O TRP C 115 N LYS C 100 SHEET 1 AA6 6 SER C 209 LEU C 210 0 SHEET 2 AA6 6 ALA C 215 ILE C 220 -1 O SER C 217 N SER C 209 SHEET 3 AA6 6 ALA C 250 GLU C 256 1 O PHE C 254 N ILE C 220 SHEET 4 AA6 6 ILE C 261 SER C 267 -1 O ARG C 266 N TRP C 251 SHEET 5 AA6 6 ALA C 287 ILE C 292 -1 O ILE C 292 N ILE C 261 SHEET 6 AA6 6 GLY C 282 HIS C 284 -1 N GLY C 282 O GLY C 289 SHEET 1 AA7 5 ASN D 46 ALA D 49 0 SHEET 2 AA7 5 THR D 14 HIS D 18 1 N LEU D 17 O PHE D 48 SHEET 3 AA7 5 LEU D 75 CYS D 79 1 O CYS D 79 N HIS D 18 SHEET 4 AA7 5 LYS D 97 ASP D 102 1 O MET D 99 N VAL D 78 SHEET 5 AA7 5 LEU D 113 VAL D 116 1 O TRP D 115 N LYS D 100 SHEET 1 AA8 6 SER D 209 LEU D 210 0 SHEET 2 AA8 6 ALA D 215 ILE D 220 -1 O SER D 217 N SER D 209 SHEET 3 AA8 6 ALA D 250 GLU D 256 1 O PHE D 254 N ILE D 220 SHEET 4 AA8 6 ILE D 261 SER D 267 -1 O ARG D 266 N TRP D 251 SHEET 5 AA8 6 ALA D 287 ILE D 292 -1 O ILE D 292 N ILE D 261 SHEET 6 AA8 6 GLY D 282 HIS D 284 -1 N GLY D 282 O GLY D 289 LINK O3' A3P A 401 P2 A3P A 402 1555 1555 1.60 LINK O3' A3P B 401 P2 A3P B 402 1555 1555 1.60 SITE 1 AC1 11 ARG A 262 ARG A 264 GLY A 281 GLY A 282 SITE 2 AC1 11 GLY A 283 HIS A 284 SER A 288 GLY A 289 SITE 3 AC1 11 HOH A 536 HOH A 546 HOH A 605 SITE 1 AC2 17 ARG B 262 ARG B 264 ARG B 266 GLY B 281 SITE 2 AC2 17 GLY B 282 GLY B 283 HIS B 284 ALA B 287 SITE 3 AC2 17 SER B 288 GLY B 289 HOH B 519 HOH B 525 SITE 4 AC2 17 HOH B 549 HOH B 568 HOH B 580 HOH B 592 SITE 5 AC2 17 HOH B 610 CRYST1 50.522 121.259 123.688 90.00 91.70 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019793 0.000000 0.000587 0.00000 SCALE2 0.000000 0.008247 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008088 0.00000