HEADER    OXIDOREDUCTASE/OXIDOREDUCTASE INHIBITOR 20-MAR-16   5IVC              
TITLE     LINKED KDM5A JMJ DOMAIN BOUND TO THE INHIBITOR N3 (4'-[(2-            
TITLE    2 PHENYLETHYL)CARBAMOYL][2,2'-BIPYRIDINE]-4-CARBOXYLIC ACID)           
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: LYSINE-SPECIFIC DEMETHYLASE 5A;                            
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: LINKED KDM5A JMJ DOMAIN, UNP RESIDUES 1-87 AND 348-588;    
COMPND   5 SYNONYM: HISTONE DEMETHYLASE JARID1A,JUMONJI/ARID DOMAIN-CONTAINING  
COMPND   6 PROTEIN 1A,RETINOBLASTOMA-BINDING PROTEIN 2,RBBP-2;                  
COMPND   7 EC: 1.14.11.-;                                                       
COMPND   8 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;                                   
SOURCE   3 ORGANISM_COMMON: HUMAN;                                              
SOURCE   4 ORGANISM_TAXID: 9606;                                                
SOURCE   5 GENE: KDM5A, JARID1A, RBBP2, RBP2;                                   
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3);                                
SOURCE   9 EXPRESSION_SYSTEM_VARIANT: GOLD C-PLUS                               
KEYWDS    DEMETHYLASE INHIBITION, OXIDOREDUCTASE-OXIDOREDUCTASE INHIBITOR       
KEYWDS   2 COMPLEX                                                              
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    J.R.HORTON,X.CHENG                                                    
REVDAT   3   27-SEP-23 5IVC    1       REMARK                                   
REVDAT   2   03-AUG-16 5IVC    1       JRNL                                     
REVDAT   1   27-JUL-16 5IVC    0                                                
JRNL        AUTH   J.R.HORTON,X.LIU,M.GALE,L.WU,J.R.SHANKS,X.ZHANG,P.J.WEBBER,  
JRNL        AUTH 2 J.S.BELL,S.C.KALES,B.T.MOTT,G.RAI,D.J.JANSEN,M.J.HENDERSON,  
JRNL        AUTH 3 D.J.URBAN,M.D.HALL,A.SIMEONOV,D.J.MALONEY,M.A.JOHNS,H.FU,    
JRNL        AUTH 4 A.JADHAV,P.M.VERTINO,Q.YAN,X.CHENG                           
JRNL        TITL   STRUCTURAL BASIS FOR KDM5A HISTONE LYSINE DEMETHYLASE        
JRNL        TITL 2 INHIBITION BY DIVERSE COMPOUNDS.                             
JRNL        REF    CELL CHEM BIOL                V.  23   769 2016              
JRNL        REFN                   ESSN 2451-9456                               
JRNL        PMID   27427228                                                     
JRNL        DOI    10.1016/J.CHEMBIOL.2016.06.006                               
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   J.R.HORTON,A.ENGSTROM,E.L.ZOELLER,X.LIU,J.R.SHANKS,X.ZHANG,  
REMARK   1  AUTH 2 M.A.JOHNS,P.M.VERTINO,H.FU,X.CHENG                           
REMARK   1  TITL   CHARACTERIZATION OF A LINKED JUMONJI DOMAIN OF THE           
REMARK   1  TITL 2 KDM5/JARID1 FAMILY OF HISTONE H3 LYSINE 4 DEMETHYLASES.      
REMARK   1  REF    J. BIOL. CHEM.                V. 291  2631 2016              
REMARK   1  REFN                   ESSN 1083-351X                               
REMARK   1  PMID   26645689                                                     
REMARK   1  DOI    10.1074/JBC.M115.698449                                      
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.57 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.10.1_2155                                   
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 36.98                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 1.340                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 97.0                           
REMARK   3   NUMBER OF REFLECTIONS             : 44784                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.167                           
REMARK   3   R VALUE            (WORKING SET) : 0.166                           
REMARK   3   FREE R VALUE                     : 0.184                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.450                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1992                            
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 36.9929 -  3.7891    0.99     3227   147  0.1499 0.1491        
REMARK   3     2  3.7891 -  3.0079    0.99     3145   142  0.1425 0.1547        
REMARK   3     3  3.0079 -  2.6278    0.99     3125   140  0.1522 0.1798        
REMARK   3     4  2.6278 -  2.3876    0.98     3109   150  0.1662 0.1908        
REMARK   3     5  2.3876 -  2.2165    0.98     3089   130  0.1599 0.1957        
REMARK   3     6  2.2165 -  2.0858    0.97     3069   150  0.1552 0.1850        
REMARK   3     7  2.0858 -  1.9814    0.98     3072   147  0.1532 0.1507        
REMARK   3     8  1.9814 -  1.8951    0.97     3032   144  0.1623 0.1883        
REMARK   3     9  1.8951 -  1.8222    0.97     3061   139  0.1879 0.2114        
REMARK   3    10  1.8222 -  1.7593    0.97     3034   148  0.1942 0.2268        
REMARK   3    11  1.7593 -  1.7043    0.97     3030   142  0.2114 0.2516        
REMARK   3    12  1.7043 -  1.6556    0.97     3013   133  0.2356 0.2805        
REMARK   3    13  1.6556 -  1.6120    0.96     3009   137  0.2846 0.3052        
REMARK   3    14  1.6120 -  1.5727    0.89     2777   143  0.3468 0.3620        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : NULL                                          
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.190            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.270           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.006           2597                                  
REMARK   3   ANGLE     :  0.781           3549                                  
REMARK   3   CHIRALITY :  0.049            364                                  
REMARK   3   PLANARITY :  0.005            469                                  
REMARK   3   DIHEDRAL  : 14.256           1506                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : 4                                          
REMARK   3   TLS GROUP : 1                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESID 12 THROUGH 355 )                  
REMARK   3    ORIGIN FOR THE GROUP (A): -21.4703  14.0688   8.3767              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1037 T22:   0.1102                                     
REMARK   3      T33:   0.0685 T12:  -0.0236                                     
REMARK   3      T13:   0.0003 T23:   0.0368                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.4766 L22:   2.2184                                     
REMARK   3      L33:   1.5275 L12:   0.0603                                     
REMARK   3      L13:  -0.0212 L23:   0.6290                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0112 S12:  -0.0043 S13:  -0.0125                       
REMARK   3      S21:   0.0393 S22:   0.0447 S23:  -0.1036                       
REMARK   3      S31:  -0.0863 S32:   0.0879 S33:  -0.0587                       
REMARK   3   TLS GROUP : 2                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESID 356 THROUGH 399 )                 
REMARK   3    ORIGIN FOR THE GROUP (A): -29.2161  20.8145  22.1781              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1849 T22:   0.1116                                     
REMARK   3      T33:   0.1076 T12:   0.0485                                     
REMARK   3      T13:   0.0235 T23:  -0.0005                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   3.3832 L22:   2.3113                                     
REMARK   3      L33:   3.0904 L12:   1.5561                                     
REMARK   3      L13:   0.1567 L23:   0.6204                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:  -0.0129 S12:  -0.1829 S13:   0.1851                       
REMARK   3      S21:   0.2957 S22:  -0.0275 S23:   0.1276                       
REMARK   3      S31:  -0.1248 S32:  -0.0352 S33:  -0.0056                       
REMARK   3   TLS GROUP : 3                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESID 400 THROUGH 459 )                 
REMARK   3    ORIGIN FOR THE GROUP (A): -11.8014  21.9412   5.3737              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1609 T22:   0.1734                                     
REMARK   3      T33:   0.1855 T12:  -0.0548                                     
REMARK   3      T13:   0.0154 T23:   0.0078                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   1.5240 L22:   1.2155                                     
REMARK   3      L33:   1.7548 L12:  -1.0126                                     
REMARK   3      L13:  -0.4954 L23:   0.4574                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0406 S12:   0.1200 S13:   0.1376                       
REMARK   3      S21:  -0.0602 S22:  -0.0053 S23:  -0.1251                       
REMARK   3      S31:  -0.2528 S32:   0.2340 S33:  -0.0203                       
REMARK   3   TLS GROUP : 4                                                      
REMARK   3    SELECTION: CHAIN 'A' AND (RESID 460 THROUGH 588 )                 
REMARK   3    ORIGIN FOR THE GROUP (A): -27.2598  14.8776   3.2486              
REMARK   3    T TENSOR                                                          
REMARK   3      T11:   0.1097 T22:   0.1034                                     
REMARK   3      T33:   0.1177 T12:   0.0001                                     
REMARK   3      T13:   0.0122 T23:   0.0085                                     
REMARK   3    L TENSOR                                                          
REMARK   3      L11:   0.9455 L22:   1.1316                                     
REMARK   3      L33:   1.7360 L12:  -0.0668                                     
REMARK   3      L13:   0.3506 L23:   0.3223                                     
REMARK   3    S TENSOR                                                          
REMARK   3      S11:   0.0169 S12:   0.0437 S13:  -0.0348                       
REMARK   3      S21:  -0.0240 S22:  -0.0200 S23:   0.0810                       
REMARK   3      S31:  -0.0607 S32:  -0.0484 S33:   0.0012                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 5IVC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAR-16.                  
REMARK 100 THE DEPOSITION ID IS D_1000219493.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 18-DEC-15                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 8.6-9.2                            
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 22-ID                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.00000                            
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : RAYONIX MX300-HS                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 44796                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.570                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 36.983                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 96.7                               
REMARK 200  DATA REDUNDANCY                : 8.200                              
REMARK 200  R MERGE                    (I) : 0.05700                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 25.6000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.63                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 87.9                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 5.30                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.97100                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 1.400                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHENIX                                                
REMARK 200 STARTING MODEL: 5E6H                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 44.53                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 1.2-1.35 M (NH4)2SO4, 0.1 M TRIS-HCL     
REMARK 280  (PH 8.6-9.2) 0-20% GLYCEROL 25 MM (NA/K) DIBASIC/MONOBASIC          
REMARK 280  PHOSPHATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K          
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290       3555   X+1/2,Y+1/2,Z                                           
REMARK 290       4555   -X+1/2,Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   3  1.000000  0.000000  0.000000       58.10800            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       31.14750            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   4 -1.000000  0.000000  0.000000       58.10800            
REMARK 290   SMTRY2   4  0.000000  1.000000  0.000000       31.14750            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A 931  LIES ON A SPECIAL POSITION.                          
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     HIS A    -1                                                      
REMARK 465     ASN A     0                                                      
REMARK 465     MET A     1                                                      
REMARK 465     ALA A     2                                                      
REMARK 465     GLY A     3                                                      
REMARK 465     VAL A     4                                                      
REMARK 465     GLY A     5                                                      
REMARK 465     PRO A     6                                                      
REMARK 465     GLY A     7                                                      
REMARK 465     GLY A     8                                                      
REMARK 465     TYR A     9                                                      
REMARK 465     ALA A    10                                                      
REMARK 465     ALA A    11                                                      
REMARK 465     THR A   344                                                      
REMARK 465     ARG A   345                                                      
REMARK 465     VAL A   346                                                      
REMARK 465     VAL A   461                                                      
REMARK 465     ASP A   462                                                      
REMARK 465     ILE A   463                                                      
REMARK 465     SER A   464                                                      
REMARK 465     GLY A   465                                                      
REMARK 465     MET A   466                                                      
REMARK 470                                                                      
REMARK 470 MISSING ATOM                                                         
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 470 I=INSERTION CODE):                                                   
REMARK 470   M RES CSSEQI  ATOMS                                                
REMARK 470     GLU A  12    CG   CD   OE1  OE2                                  
REMARK 470     GLU A  27    CG   CD   OE1  OE2                                  
REMARK 470     LYS A  55    CG   CD   CE   NZ                                   
REMARK 470     GLU A  64    CG   CD   OE1  OE2                                  
REMARK 470     LYS A  66    CG   CD   CE   NZ                                   
REMARK 470     ARG A  69    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ARG A 347    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     ARG A 349    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU A 350    CG   CD   OE1  OE2                                  
REMARK 470     VAL A 358    CG1  CG2                                            
REMARK 470     ARG A 359    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     LYS A 392    CG   CD   CE   NZ                                   
REMARK 470     LYS A 416    CG   CD   CE   NZ                                   
REMARK 470     LYS A 430    CG   CD   CE   NZ                                   
REMARK 470     GLU A 452    CG   CD   OE1  OE2                                  
REMARK 470     ASN A 460    CG   OD1  ND2                                       
REMARK 470     LYS A 467    CG   CD   CE   NZ                                   
REMARK 470     ARG A 519    CG   CD   NE   CZ   NH1  NH2                        
REMARK 470     GLU A 524    CG   CD   OE1  OE2                                  
REMARK 470     GLU A 527    CG   CD   OE1  OE2                                  
REMARK 470     LEU A 532    CG   CD1  CD2                                       
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    HOH A   854     O    HOH A   914              1.91            
REMARK 500   O    HOH A   862     O    HOH A   925              2.01            
REMARK 500   O    HOH A   950     O    HOH A   966              2.10            
REMARK 500   O    HOH A   729     O    HOH A   906              2.14            
REMARK 500   O    HOH A   766     O    HOH A   934              2.16            
REMARK 500   NH2  ARG A    76     O    HOH A   701              2.17            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O    HOH A   975     O    HOH A   977     4446     2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    PHE A 477       -7.51     81.05                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 602  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 HIS A 483   NE2                                                    
REMARK 620 2 GLU A 485   OE1  95.7                                              
REMARK 620 3 HIS A 571   NE2  81.6  90.6                                        
REMARK 620 4 6E7 A 601   N07  92.6 166.1 101.7                                  
REMARK 620 5 6E7 A 601   N15  79.9  97.8 160.4  72.7                            
REMARK 620 6 HOH A 815   O   173.3  90.4  95.6  82.0 102.0                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue 6E7 A 601                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 602                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 603                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 604                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 605                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 606                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 5ISL   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5IVB   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5IVE   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5IVF   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5IVJ   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5IVV   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5IVY   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5IW0   RELATED DB: PDB                                   
REMARK 900 RELATED ID: 5IWF   RELATED DB: PDB                                   
DBREF  5IVC A    1   347  UNP    P29375   KDM5A_HUMAN      1     87             
DBREF  5IVC A  348   588  UNP    P29375   KDM5A_HUMAN    348    588             
SEQADV 5IVC HIS A   -1  UNP  P29375              EXPRESSION TAG                 
SEQADV 5IVC ASN A    0  UNP  P29375              EXPRESSION TAG                 
SEQRES   1 A  330  HIS ASN MET ALA GLY VAL GLY PRO GLY GLY TYR ALA ALA          
SEQRES   2 A  330  GLU PHE VAL PRO PRO PRO GLU CYS PRO VAL PHE GLU PRO          
SEQRES   3 A  330  SER TRP GLU GLU PHE THR ASP PRO LEU SER PHE ILE GLY          
SEQRES   4 A  330  ARG ILE ARG PRO LEU ALA GLU LYS THR GLY ILE CYS LYS          
SEQRES   5 A  330  ILE ARG PRO PRO LYS ASP TRP GLN PRO PRO PHE ALA CYS          
SEQRES   6 A  330  GLU VAL LYS SER PHE ARG PHE THR PRO ARG VAL GLN ARG          
SEQRES   7 A  330  LEU ASN GLU LEU GLU ALA MET THR ARG VAL ARG PRO ARG          
SEQRES   8 A  330  GLU ALA PHE GLY PHE GLU GLN ALA VAL ARG GLU TYR THR          
SEQRES   9 A  330  LEU GLN SER PHE GLY GLU MET ALA ASP ASN PHE LYS SER          
SEQRES  10 A  330  ASP TYR PHE ASN MET PRO VAL HIS MET VAL PRO THR GLU          
SEQRES  11 A  330  LEU VAL GLU LYS GLU PHE TRP ARG LEU VAL SER SER ILE          
SEQRES  12 A  330  GLU GLU ASP VAL ILE VAL GLU TYR GLY ALA ASP ILE SER          
SEQRES  13 A  330  SER LYS ASP PHE GLY SER GLY PHE PRO VAL LYS ASP GLY          
SEQRES  14 A  330  ARG ARG LYS ILE LEU PRO GLU GLU GLU GLU TYR ALA LEU          
SEQRES  15 A  330  SER GLY TRP ASN LEU ASN ASN MET PRO VAL LEU GLU GLN          
SEQRES  16 A  330  SER VAL LEU ALA HIS ILE ASN VAL ASP ILE SER GLY MET          
SEQRES  17 A  330  LYS VAL PRO TRP LEU TYR VAL GLY MET CYS PHE SER SER          
SEQRES  18 A  330  PHE CYS TRP HIS ILE GLU ASP HIS TRP SER TYR SER ILE          
SEQRES  19 A  330  ASN TYR LEU HIS TRP GLY GLU PRO LYS THR TRP TYR GLY          
SEQRES  20 A  330  VAL PRO SER HIS ALA ALA GLU GLN LEU GLU GLU VAL MET          
SEQRES  21 A  330  ARG GLU LEU ALA PRO GLU LEU PHE GLU SER GLN PRO ASP          
SEQRES  22 A  330  LEU LEU HIS GLN LEU VAL THR ILE MET ASN PRO ASN VAL          
SEQRES  23 A  330  LEU MET GLU HIS GLY VAL PRO VAL TYR ARG THR ASN GLN          
SEQRES  24 A  330  CYS ALA GLY GLU PHE VAL VAL THR PHE PRO ARG ALA TYR          
SEQRES  25 A  330  HIS SER GLY PHE ASN GLN GLY TYR ASN PHE ALA GLU ALA          
SEQRES  26 A  330  VAL ASN PHE CYS THR                                          
HET    6E7  A 601      26                                                       
HET     MN  A 602       1                                                       
HET    EDO  A 603       5                                                       
HET    EDO  A 604       4                                                       
HET    EDO  A 605       4                                                       
HET    GOL  A 606       6                                                       
HETNAM     6E7 4'-[(2-PHENYLETHYL)CARBAMOYL][2,2'-BIPYRIDINE]-4-                
HETNAM   2 6E7  CARBOXYLIC ACID                                                 
HETNAM      MN MANGANESE (II) ION                                               
HETNAM     EDO 1,2-ETHANEDIOL                                                   
HETNAM     GOL GLYCEROL                                                         
HETSYN     EDO ETHYLENE GLYCOL                                                  
HETSYN     GOL GLYCERIN; PROPANE-1,2,3-TRIOL                                    
FORMUL   2  6E7    C20 H17 N3 O3                                                
FORMUL   3   MN    MN 2+                                                        
FORMUL   4  EDO    3(C2 H6 O2)                                                  
FORMUL   7  GOL    C3 H8 O3                                                     
FORMUL   8  HOH   *278(H2 O)                                                    
HELIX    1 AA1 ASP A   31  GLU A   44  1                                  14    
HELIX    2 AA2 LEU A  363  ASN A  379  1                                  17    
HELIX    3 AA3 PRO A  381  VAL A  385  5                                   5    
HELIX    4 AA4 PRO A  386  SER A  400  1                                  15    
HELIX    5 AA5 SER A  415  GLY A  419  1                                   5    
HELIX    6 AA6 LEU A  432  GLU A  434  5                                   3    
HELIX    7 AA7 GLU A  435  SER A  441  1                                   7    
HELIX    8 AA8 ASN A  444  MET A  448  5                                   5    
HELIX    9 AA9 SER A  454  ASN A  460  1                                   7    
HELIX   10 AB1 GLU A  485  SER A  489  5                                   5    
HELIX   11 AB2 PRO A  507  HIS A  509  5                                   3    
HELIX   12 AB3 ALA A  510  ALA A  522  1                                  13    
HELIX   13 AB4 PRO A  523  GLU A  527  5                                   5    
HELIX   14 AB5 PRO A  530  GLN A  535  1                                   6    
HELIX   15 AB6 ASN A  541  HIS A  548  1                                   8    
SHEET    1 AA1 8 VAL A  21  PHE A  22  0                                        
SHEET    2 AA1 8 ILE A  48  ILE A  51  1  O  LYS A  50   N  PHE A  22           
SHEET    3 AA1 8 PHE A 562  THR A 565 -1  O  PHE A 562   N  ILE A  51           
SHEET    4 AA1 8 TYR A 490  GLY A 498 -1  N  SER A 491   O  THR A 565           
SHEET    5 AA1 8 ASN A 579  PHE A 586 -1  O  GLU A 582   N  TYR A 494           
SHEET    6 AA1 8 TRP A 470  GLY A 474 -1  N  TYR A 472   O  ALA A 581           
SHEET    7 AA1 8 ILE A 406  SER A 414 -1  N  ILE A 413   O  LEU A 471           
SHEET    8 AA1 8 ARG A  73  ARG A  76 -1  N  GLN A  75   O  VAL A 407           
SHEET    1 AA2 2 ARG A  69  PHE A  70  0                                        
SHEET    2 AA2 2 TYR A 361  THR A 362 -1  O  TYR A 361   N  PHE A  70           
SHEET    1 AA3 4 SER A 479  HIS A 483  0                                        
SHEET    2 AA3 4 TYR A 570  ASN A 575 -1  O  GLY A 573   N  PHE A 480           
SHEET    3 AA3 4 LYS A 501  VAL A 506 -1  N  THR A 502   O  PHE A 574           
SHEET    4 AA3 4 TYR A 553  GLN A 557 -1  O  GLN A 557   N  LYS A 501           
LINK         NE2 HIS A 483                MN    MN A 602     1555   1555  2.26  
LINK         OE1 GLU A 485                MN    MN A 602     1555   1555  2.06  
LINK         NE2 HIS A 571                MN    MN A 602     1555   1555  2.29  
LINK         N07 6E7 A 601                MN    MN A 602     1555   1555  2.25  
LINK         N15 6E7 A 601                MN    MN A 602     1555   1555  2.24  
LINK        MN    MN A 602                 O   HOH A 815     1555   1555  2.22  
SITE     1 AC1 12 ARG A  73  TYR A 409  TYR A 472  SER A 479                    
SITE     2 AC1 12 PHE A 480  HIS A 483  GLU A 485  LYS A 501                    
SITE     3 AC1 12 TRP A 503  HIS A 571   MN A 602  HOH A 815                    
SITE     1 AC2  5 HIS A 483  GLU A 485  HIS A 571  6E7 A 601                    
SITE     2 AC2  5 HOH A 815                                                     
SITE     1 AC3  4 LYS A  45  ARG A  73  HIS A 509  HOH A 803                    
SITE     1 AC4  4 GLU A  64  VAL A  65  LYS A  66  ARG A 429                    
SITE     1 AC5  6 SER A 399  ILE A 539  MET A 540  ASN A 541                    
SITE     2 AC5  6 HOH A 778  HOH A 806                                          
SITE     1 AC6  9 MET A 380  PRO A 381  GLU A 485  ASP A 486                    
SITE     2 AC6  9 HIS A 487  TRP A 488  HOH A 703  HOH A 718                    
SITE     3 AC6  9 HOH A 898                                                     
CRYST1  116.216   62.295   46.519  90.00  92.18  90.00 C 1 2 1       4          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.008605  0.000000  0.000328        0.00000                         
SCALE2      0.000000  0.016053  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.021512        0.00000