HEADER HYDROLASE 23-MAR-16 5IXE TITLE 1.75A RESOLUTION STRUCTURE OF 5-FLUOROINDOLE BOUND BETA-GLYCOSIDASE TITLE 2 (W33G) FROM SULFOLOBUS SOLFATARICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-GALACTOSIDASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LACTASE; COMPND 5 EC: 3.2.1.23; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 273057; SOURCE 4 STRAIN: ATCC 35092 / DSM 1617 / JCM 11322 / P2; SOURCE 5 GENE: LACS, SSO3019; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(2DE3) PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET29 KEYWDS GLYCOSIDE HYDROLASE, ALLOSTERIC ACTIVATION, SWITCHABLE ENZYME, KEYWDS 2 CHEMICAL RESCUE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.LOVELL,K.P.BATTAILE,N.MEHZABEEN,S.J.BUDIARDJO,J.KARANICOLAS REVDAT 5 27-SEP-23 5IXE 1 REMARK REVDAT 4 27-NOV-19 5IXE 1 SEQADV REVDAT 3 20-SEP-17 5IXE 1 REMARK REVDAT 2 28-DEC-16 5IXE 1 JRNL REVDAT 1 20-JUL-16 5IXE 0 JRNL AUTH S.J.BUDIARDJO,T.J.LICKNACK,M.B.CORY,D.KAPROS,A.ROY,S.LOVELL, JRNL AUTH 2 J.DOUGLAS,J.KARANICOLAS JRNL TITL FULL AND PARTIAL AGONISM OF A DESIGNED ENZYME SWITCH. JRNL REF ACS SYNTH BIOL V. 5 1475 2016 JRNL REFN ESSN 2161-5063 JRNL PMID 27389009 JRNL DOI 10.1021/ACSSYNBIO.6B00097 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2026) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 155583 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 7720 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 34.0694 - 5.4306 1.00 5162 271 0.1739 0.1694 REMARK 3 2 5.4306 - 4.3132 1.00 4994 269 0.1371 0.1600 REMARK 3 3 4.3132 - 3.7688 1.00 5031 235 0.1224 0.1474 REMARK 3 4 3.7688 - 3.4245 1.00 4990 220 0.1335 0.1299 REMARK 3 5 3.4245 - 3.1793 1.00 4964 260 0.1385 0.1447 REMARK 3 6 3.1793 - 2.9919 1.00 4920 269 0.1382 0.1599 REMARK 3 7 2.9919 - 2.8422 1.00 4944 256 0.1415 0.1665 REMARK 3 8 2.8422 - 2.7185 1.00 4971 219 0.1443 0.1740 REMARK 3 9 2.7185 - 2.6139 1.00 4903 275 0.1390 0.1598 REMARK 3 10 2.6139 - 2.5237 1.00 4930 265 0.1335 0.1531 REMARK 3 11 2.5237 - 2.4448 1.00 4911 276 0.1392 0.1607 REMARK 3 12 2.4448 - 2.3750 1.00 4968 231 0.1435 0.1744 REMARK 3 13 2.3750 - 2.3125 1.00 4926 240 0.1432 0.1630 REMARK 3 14 2.3125 - 2.2561 1.00 4924 262 0.1510 0.1790 REMARK 3 15 2.2561 - 2.2048 1.00 4889 244 0.1525 0.1855 REMARK 3 16 2.2048 - 2.1579 1.00 4919 270 0.1616 0.1932 REMARK 3 17 2.1579 - 2.1147 1.00 4893 275 0.1646 0.1890 REMARK 3 18 2.1147 - 2.0748 1.00 4912 216 0.1653 0.1876 REMARK 3 19 2.0748 - 2.0378 1.00 4905 260 0.1696 0.1938 REMARK 3 20 2.0378 - 2.0032 1.00 4885 290 0.1760 0.2229 REMARK 3 21 2.0032 - 1.9709 1.00 4872 269 0.1816 0.2099 REMARK 3 22 1.9709 - 1.9406 1.00 4919 274 0.1898 0.2309 REMARK 3 23 1.9406 - 1.9121 1.00 4822 279 0.1901 0.2049 REMARK 3 24 1.9121 - 1.8851 1.00 4938 228 0.1969 0.2134 REMARK 3 25 1.8851 - 1.8597 1.00 4882 273 0.2097 0.2248 REMARK 3 26 1.8597 - 1.8355 1.00 4942 256 0.2258 0.2484 REMARK 3 27 1.8355 - 1.8126 1.00 4810 306 0.2344 0.2654 REMARK 3 28 1.8126 - 1.7907 1.00 4870 280 0.2473 0.2944 REMARK 3 29 1.7907 - 1.7699 1.00 4944 193 0.2527 0.2887 REMARK 3 30 1.7699 - 1.7500 1.00 4923 259 0.2691 0.3120 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.56 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 8294 REMARK 3 ANGLE : 1.006 11341 REMARK 3 CHIRALITY : 0.058 1147 REMARK 3 PLANARITY : 0.007 1476 REMARK 3 DIHEDRAL : 12.171 2981 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IXE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219618. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 155679 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 48.410 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.10 REMARK 200 R MERGE FOR SHELL (I) : 1.16200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 4EAN REMARK 200 REMARK 200 REMARK: COLORLESS PRISM REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 64.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 45% 2,-METHYL-2,4-PENTANEDIOL, 100 MM REMARK 280 BIS-TRIS, 200 MM CACL2, PH 6.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.95700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 63.91400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 63.91400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 31.95700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 31.95700 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 31.95700 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 34190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -67.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 31.95700 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 63790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -161.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 31.95700 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 300 REMARK 465 GLY A 301 REMARK 465 ASN A 302 REMARK 465 GLU A 303 REMARK 465 GLU B 303 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 94 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 96 CG CD OE1 NE2 REMARK 470 ASN A 97 CG OD1 ND2 REMARK 470 GLU A 100 CG CD OE1 OE2 REMARK 470 GLN A 103 CG CD OE1 NE2 REMARK 470 GLU A 112 CD OE1 OE2 REMARK 470 LYS A 135 CE NZ REMARK 470 GLU A 230 CD OE1 OE2 REMARK 470 LYS A 255 CE NZ REMARK 470 LYS A 273 CG CD CE NZ REMARK 470 GLU A 276 CG CD OE1 OE2 REMARK 470 LYS A 304 CG CD CE NZ REMARK 470 ARG A 329 CD NE CZ NH1 NH2 REMARK 470 GLU A 331 CG CD OE1 OE2 REMARK 470 LYS A 332 CG CD CE NZ REMARK 470 LYS A 485 CE NZ REMARK 470 ARG B 94 CG CD NE CZ NH1 NH2 REMARK 470 GLN B 96 CG CD OE1 NE2 REMARK 470 ASN B 97 CG OD1 ND2 REMARK 470 GLU B 100 CG CD OE1 OE2 REMARK 470 GLU B 112 CD OE1 OE2 REMARK 470 LYS B 116 CD CE NZ REMARK 470 ARG B 234 CZ NH1 NH2 REMARK 470 LYS B 255 CD CE NZ REMARK 470 LYS B 273 CD CE NZ REMARK 470 GLU B 276 CD OE1 OE2 REMARK 470 ARG B 300 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 302 CG OD1 ND2 REMARK 470 LYS B 304 CG CD CE NZ REMARK 470 ARG B 329 CD NE CZ NH1 NH2 REMARK 470 GLU B 331 CG CD OE1 OE2 REMARK 470 LYS B 332 CG CD CE NZ REMARK 470 GLU B 366 CG CD OE1 OE2 REMARK 470 LYS B 485 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 843 O HOH A 853 2.07 REMARK 500 O HOH A 622 O HOH A 764 2.08 REMARK 500 O HOH A 602 O HOH A 640 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 712 O HOH B 712 6555 1.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 96 -76.53 -71.03 REMARK 500 TRP A 151 -52.61 106.83 REMARK 500 VAL A 216 -56.01 -130.09 REMARK 500 SER A 228 114.75 -163.76 REMARK 500 ARG A 286 -57.92 -128.81 REMARK 500 SER A 348 -153.31 -149.27 REMARK 500 PHE A 364 68.76 -153.38 REMARK 500 ASP A 392 81.96 -162.24 REMARK 500 GLU A 432 59.07 -94.84 REMARK 500 TRP A 433 -127.05 56.25 REMARK 500 TRP B 151 -54.14 108.09 REMARK 500 VAL B 216 -58.88 -131.53 REMARK 500 SER B 228 112.09 -166.38 REMARK 500 ARG B 286 -60.59 -130.91 REMARK 500 ARG B 300 -61.06 -105.36 REMARK 500 ARG B 313 53.53 -92.29 REMARK 500 SER B 348 -153.12 -146.47 REMARK 500 PHE B 364 68.20 -152.29 REMARK 500 ASP B 392 80.77 -165.76 REMARK 500 TRP B 433 -129.08 54.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 14O A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 14O B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 504 DBREF 5IXE A 1 489 UNP P22498 BGAL_SULSO 1 489 DBREF 5IXE B 1 489 UNP P22498 BGAL_SULSO 1 489 SEQADV 5IXE GLY A 33 UNP P22498 TRP 33 ENGINEERED MUTATION SEQADV 5IXE GLY B 33 UNP P22498 TRP 33 ENGINEERED MUTATION SEQRES 1 A 489 MET TYR SER PHE PRO ASN SER PHE ARG PHE GLY TRP SER SEQRES 2 A 489 GLN ALA GLY PHE GLN SER GLU MET GLY THR PRO GLY SER SEQRES 3 A 489 GLU ASP PRO ASN THR ASP GLY TYR LYS TRP VAL HIS ASP SEQRES 4 A 489 PRO GLU ASN MET ALA ALA GLY LEU VAL SER GLY ASP LEU SEQRES 5 A 489 PRO GLU ASN GLY PRO GLY TYR TRP GLY ASN TYR LYS THR SEQRES 6 A 489 PHE HIS ASP ASN ALA GLN LYS MET GLY LEU LYS ILE ALA SEQRES 7 A 489 ARG LEU ASN VAL GLU TRP SER ARG ILE PHE PRO ASN PRO SEQRES 8 A 489 LEU PRO ARG PRO GLN ASN PHE ASP GLU SER LYS GLN ASP SEQRES 9 A 489 VAL THR GLU VAL GLU ILE ASN GLU ASN GLU LEU LYS ARG SEQRES 10 A 489 LEU ASP GLU TYR ALA ASN LYS ASP ALA LEU ASN HIS TYR SEQRES 11 A 489 ARG GLU ILE PHE LYS ASP LEU LYS SER ARG GLY LEU TYR SEQRES 12 A 489 PHE ILE LEU ASN MET TYR HIS TRP PRO LEU PRO LEU TRP SEQRES 13 A 489 LEU HIS ASP PRO ILE ARG VAL ARG ARG GLY ASP PHE THR SEQRES 14 A 489 GLY PRO SER GLY TRP LEU SER THR ARG THR VAL TYR GLU SEQRES 15 A 489 PHE ALA ARG PHE SER ALA TYR ILE ALA TRP LYS PHE ASP SEQRES 16 A 489 ASP LEU VAL ASP GLU TYR SER THR MET ASN GLU PRO ASN SEQRES 17 A 489 VAL VAL GLY GLY LEU GLY TYR VAL GLY VAL LYS SER GLY SEQRES 18 A 489 PHE PRO PRO GLY TYR LEU SER PHE GLU LEU SER ARG ARG SEQRES 19 A 489 ALA MET TYR ASN ILE ILE GLN ALA HIS ALA ARG ALA TYR SEQRES 20 A 489 ASP GLY ILE LYS SER VAL SER LYS LYS PRO VAL GLY ILE SEQRES 21 A 489 ILE TYR ALA ASN SER SER PHE GLN PRO LEU THR ASP LYS SEQRES 22 A 489 ASP MET GLU ALA VAL GLU MET ALA GLU ASN ASP ASN ARG SEQRES 23 A 489 TRP TRP PHE PHE ASP ALA ILE ILE ARG GLY GLU ILE THR SEQRES 24 A 489 ARG GLY ASN GLU LYS ILE VAL ARG ASP ASP LEU LYS GLY SEQRES 25 A 489 ARG LEU ASP TRP ILE GLY VAL ASN TYR TYR THR ARG THR SEQRES 26 A 489 VAL VAL LYS ARG THR GLU LYS GLY TYR VAL SER LEU GLY SEQRES 27 A 489 GLY TYR GLY HIS GLY CYS GLU ARG ASN SER VAL SER LEU SEQRES 28 A 489 ALA GLY LEU PRO THR SER ASP PHE GLY TRP GLU PHE PHE SEQRES 29 A 489 PRO GLU GLY LEU TYR ASP VAL LEU THR LYS TYR TRP ASN SEQRES 30 A 489 ARG TYR HIS LEU TYR MET TYR VAL THR GLU ASN GLY ILE SEQRES 31 A 489 ALA ASP ASP ALA ASP TYR GLN ARG PRO TYR TYR LEU VAL SEQRES 32 A 489 SER HIS VAL TYR GLN VAL HIS ARG ALA ILE ASN SER GLY SEQRES 33 A 489 ALA ASP VAL ARG GLY TYR LEU HIS TRP SER LEU ALA ASP SEQRES 34 A 489 ASN TYR GLU TRP ALA SER GLY PHE SER MET ARG PHE GLY SEQRES 35 A 489 LEU LEU LYS VAL ASP TYR ASN THR LYS ARG LEU TYR TRP SEQRES 36 A 489 ARG PRO SER ALA LEU VAL TYR ARG GLU ILE ALA THR ASN SEQRES 37 A 489 GLY ALA ILE THR ASP GLU ILE GLU HIS LEU ASN SER VAL SEQRES 38 A 489 PRO PRO VAL LYS PRO LEU ARG HIS SEQRES 1 B 489 MET TYR SER PHE PRO ASN SER PHE ARG PHE GLY TRP SER SEQRES 2 B 489 GLN ALA GLY PHE GLN SER GLU MET GLY THR PRO GLY SER SEQRES 3 B 489 GLU ASP PRO ASN THR ASP GLY TYR LYS TRP VAL HIS ASP SEQRES 4 B 489 PRO GLU ASN MET ALA ALA GLY LEU VAL SER GLY ASP LEU SEQRES 5 B 489 PRO GLU ASN GLY PRO GLY TYR TRP GLY ASN TYR LYS THR SEQRES 6 B 489 PHE HIS ASP ASN ALA GLN LYS MET GLY LEU LYS ILE ALA SEQRES 7 B 489 ARG LEU ASN VAL GLU TRP SER ARG ILE PHE PRO ASN PRO SEQRES 8 B 489 LEU PRO ARG PRO GLN ASN PHE ASP GLU SER LYS GLN ASP SEQRES 9 B 489 VAL THR GLU VAL GLU ILE ASN GLU ASN GLU LEU LYS ARG SEQRES 10 B 489 LEU ASP GLU TYR ALA ASN LYS ASP ALA LEU ASN HIS TYR SEQRES 11 B 489 ARG GLU ILE PHE LYS ASP LEU LYS SER ARG GLY LEU TYR SEQRES 12 B 489 PHE ILE LEU ASN MET TYR HIS TRP PRO LEU PRO LEU TRP SEQRES 13 B 489 LEU HIS ASP PRO ILE ARG VAL ARG ARG GLY ASP PHE THR SEQRES 14 B 489 GLY PRO SER GLY TRP LEU SER THR ARG THR VAL TYR GLU SEQRES 15 B 489 PHE ALA ARG PHE SER ALA TYR ILE ALA TRP LYS PHE ASP SEQRES 16 B 489 ASP LEU VAL ASP GLU TYR SER THR MET ASN GLU PRO ASN SEQRES 17 B 489 VAL VAL GLY GLY LEU GLY TYR VAL GLY VAL LYS SER GLY SEQRES 18 B 489 PHE PRO PRO GLY TYR LEU SER PHE GLU LEU SER ARG ARG SEQRES 19 B 489 ALA MET TYR ASN ILE ILE GLN ALA HIS ALA ARG ALA TYR SEQRES 20 B 489 ASP GLY ILE LYS SER VAL SER LYS LYS PRO VAL GLY ILE SEQRES 21 B 489 ILE TYR ALA ASN SER SER PHE GLN PRO LEU THR ASP LYS SEQRES 22 B 489 ASP MET GLU ALA VAL GLU MET ALA GLU ASN ASP ASN ARG SEQRES 23 B 489 TRP TRP PHE PHE ASP ALA ILE ILE ARG GLY GLU ILE THR SEQRES 24 B 489 ARG GLY ASN GLU LYS ILE VAL ARG ASP ASP LEU LYS GLY SEQRES 25 B 489 ARG LEU ASP TRP ILE GLY VAL ASN TYR TYR THR ARG THR SEQRES 26 B 489 VAL VAL LYS ARG THR GLU LYS GLY TYR VAL SER LEU GLY SEQRES 27 B 489 GLY TYR GLY HIS GLY CYS GLU ARG ASN SER VAL SER LEU SEQRES 28 B 489 ALA GLY LEU PRO THR SER ASP PHE GLY TRP GLU PHE PHE SEQRES 29 B 489 PRO GLU GLY LEU TYR ASP VAL LEU THR LYS TYR TRP ASN SEQRES 30 B 489 ARG TYR HIS LEU TYR MET TYR VAL THR GLU ASN GLY ILE SEQRES 31 B 489 ALA ASP ASP ALA ASP TYR GLN ARG PRO TYR TYR LEU VAL SEQRES 32 B 489 SER HIS VAL TYR GLN VAL HIS ARG ALA ILE ASN SER GLY SEQRES 33 B 489 ALA ASP VAL ARG GLY TYR LEU HIS TRP SER LEU ALA ASP SEQRES 34 B 489 ASN TYR GLU TRP ALA SER GLY PHE SER MET ARG PHE GLY SEQRES 35 B 489 LEU LEU LYS VAL ASP TYR ASN THR LYS ARG LEU TYR TRP SEQRES 36 B 489 ARG PRO SER ALA LEU VAL TYR ARG GLU ILE ALA THR ASN SEQRES 37 B 489 GLY ALA ILE THR ASP GLU ILE GLU HIS LEU ASN SER VAL SEQRES 38 B 489 PRO PRO VAL LYS PRO LEU ARG HIS HET 14O A 501 10 HET MPD A 502 8 HET CL A 503 1 HET CL A 504 1 HET CL A 505 1 HET 14O B 501 10 HET CL B 502 1 HET CL B 503 1 HET CL B 504 1 HETNAM 14O 5-FLUORO-1H-INDOLE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM CL CHLORIDE ION FORMUL 3 14O 2(C8 H6 F N) FORMUL 4 MPD C6 H14 O2 FORMUL 5 CL 6(CL 1-) FORMUL 12 HOH *568(H2 O) HELIX 1 AA1 ALA A 15 GLU A 20 1 6 HELIX 2 AA2 THR A 31 ASP A 39 1 9 HELIX 3 AA3 ASP A 39 ALA A 45 1 7 HELIX 4 AA4 LEU A 52 GLY A 56 5 5 HELIX 5 AA5 GLY A 58 MET A 73 1 16 HELIX 6 AA6 GLU A 83 PHE A 88 1 6 HELIX 7 AA7 ASN A 111 ALA A 122 1 12 HELIX 8 AA8 ASN A 123 ARG A 140 1 18 HELIX 9 AA9 ASP A 159 ARG A 165 1 7 HELIX 10 AB1 SER A 172 LEU A 175 5 4 HELIX 11 AB2 SER A 176 ASP A 195 1 20 HELIX 12 AB3 GLU A 206 VAL A 216 1 11 HELIX 13 AB4 GLY A 217 GLY A 221 5 5 HELIX 14 AB5 SER A 228 SER A 252 1 25 HELIX 15 AB6 THR A 271 LYS A 273 5 3 HELIX 16 AB7 ASP A 274 ARG A 286 1 13 HELIX 17 AB8 ARG A 286 GLY A 296 1 11 HELIX 18 AB9 PRO A 365 HIS A 380 1 16 HELIX 19 AC1 GLN A 397 SER A 415 1 19 HELIX 20 AC2 GLU A 432 GLY A 436 5 5 HELIX 21 AC3 ARG A 456 GLY A 469 1 14 HELIX 22 AC4 THR A 472 ASN A 479 5 8 HELIX 23 AC5 ALA B 15 GLU B 20 1 6 HELIX 24 AC6 THR B 31 ASP B 39 1 9 HELIX 25 AC7 ASP B 39 ALA B 45 1 7 HELIX 26 AC8 LEU B 52 GLY B 56 5 5 HELIX 27 AC9 GLY B 58 MET B 73 1 16 HELIX 28 AD1 GLU B 83 PHE B 88 1 6 HELIX 29 AD2 ASN B 111 ALA B 122 1 12 HELIX 30 AD3 ASN B 123 ARG B 140 1 18 HELIX 31 AD4 ASP B 159 ARG B 165 1 7 HELIX 32 AD5 SER B 172 LEU B 175 5 4 HELIX 33 AD6 SER B 176 ASP B 195 1 20 HELIX 34 AD7 GLU B 206 VAL B 216 1 11 HELIX 35 AD8 GLY B 217 GLY B 221 5 5 HELIX 36 AD9 SER B 228 SER B 252 1 25 HELIX 37 AE1 ASP B 274 ARG B 286 1 13 HELIX 38 AE2 ARG B 286 GLY B 296 1 11 HELIX 39 AE3 PRO B 365 HIS B 380 1 16 HELIX 40 AE4 GLN B 397 SER B 415 1 19 HELIX 41 AE5 GLU B 432 GLY B 436 5 5 HELIX 42 AE6 ARG B 456 GLY B 469 1 14 HELIX 43 AE7 THR B 472 ASN B 479 5 8 SHEET 1 AA1 2 TYR A 2 SER A 3 0 SHEET 2 AA1 2 ALA A 470 ILE A 471 -1 O ILE A 471 N TYR A 2 SHEET 1 AA210 TYR A 334 SER A 336 0 SHEET 2 AA210 ILE A 317 ARG A 329 -1 N LYS A 328 O VAL A 335 SHEET 3 AA210 MET A 383 GLU A 387 1 O TYR A 384 N VAL A 319 SHEET 4 AA210 VAL A 419 HIS A 424 1 O ARG A 420 N MET A 383 SHEET 5 AA210 ARG A 9 SER A 13 1 N GLY A 11 O TYR A 422 SHEET 6 AA210 ILE A 77 ASN A 81 1 O ARG A 79 N TRP A 12 SHEET 7 AA210 TYR A 143 ASN A 147 1 O ASN A 147 N LEU A 80 SHEET 8 AA210 GLU A 200 ASN A 205 1 O SER A 202 N LEU A 146 SHEET 9 AA210 VAL A 258 PRO A 269 1 O GLY A 259 N TYR A 201 SHEET 10 AA210 ILE A 317 ARG A 329 1 O GLY A 318 N ILE A 260 SHEET 1 AA3 2 GLU A 297 ILE A 298 0 SHEET 2 AA3 2 ILE A 305 VAL A 306 -1 O ILE A 305 N ILE A 298 SHEET 1 AA4 2 LEU A 444 VAL A 446 0 SHEET 2 AA4 2 LEU A 453 TRP A 455 -1 O TYR A 454 N LYS A 445 SHEET 1 AA5 2 TYR B 2 SER B 3 0 SHEET 2 AA5 2 ALA B 470 ILE B 471 -1 O ILE B 471 N TYR B 2 SHEET 1 AA610 GLY B 333 SER B 336 0 SHEET 2 AA610 ILE B 317 THR B 330 -1 N THR B 330 O GLY B 333 SHEET 3 AA610 MET B 383 GLU B 387 1 O TYR B 384 N VAL B 319 SHEET 4 AA610 VAL B 419 HIS B 424 1 O ARG B 420 N MET B 383 SHEET 5 AA610 ARG B 9 SER B 13 1 N GLY B 11 O TYR B 422 SHEET 6 AA610 ILE B 77 ASN B 81 1 O ARG B 79 N TRP B 12 SHEET 7 AA610 TYR B 143 ASN B 147 1 O ASN B 147 N LEU B 80 SHEET 8 AA610 GLU B 200 ASN B 205 1 O SER B 202 N LEU B 146 SHEET 9 AA610 VAL B 258 PRO B 269 1 O GLY B 259 N TYR B 201 SHEET 10 AA610 ILE B 317 THR B 330 1 O GLY B 318 N ILE B 260 SHEET 1 AA7 2 GLU B 297 ILE B 298 0 SHEET 2 AA7 2 ILE B 305 VAL B 306 -1 O ILE B 305 N ILE B 298 SHEET 1 AA8 2 LEU B 444 VAL B 446 0 SHEET 2 AA8 2 LEU B 453 TRP B 455 -1 O TYR B 454 N LYS B 445 CISPEP 1 PRO A 223 PRO A 224 0 2.72 CISPEP 2 TRP A 425 SER A 426 0 4.45 CISPEP 3 PRO B 223 PRO B 224 0 3.84 CISPEP 4 TRP B 425 SER B 426 0 1.15 SITE 1 AC1 9 GLY A 33 VAL A 37 TRP A 151 PRO A 152 SITE 2 AC1 9 GLY A 221 PHE A 222 PRO A 223 TRP A 433 SITE 3 AC1 9 ALA A 434 SITE 1 AC2 8 PRO A 89 ASN A 90 TYR A 121 ASN A 123 SITE 2 AC2 8 HOH A 655 HOH A 718 HOH A 784 THR B 450 SITE 1 AC3 4 ASN A 264 SER A 265 ARG A 286 HOH A 767 SITE 1 AC4 2 ARG A 440 TYR A 448 SITE 1 AC5 2 ARG A 295 HOH A 727 SITE 1 AC6 9 GLY B 33 VAL B 37 TRP B 151 PRO B 152 SITE 2 AC6 9 GLY B 221 PHE B 222 PRO B 223 TRP B 433 SITE 3 AC6 9 ALA B 434 SITE 1 AC7 4 ASN B 264 SER B 265 ARG B 286 HOH B 742 SITE 1 AC8 1 ARG B 295 SITE 1 AC9 2 ARG B 440 TYR B 448 CRYST1 167.706 167.706 95.871 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005963 0.003443 0.000000 0.00000 SCALE2 0.000000 0.006885 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010431 0.00000