HEADER TRANSFERASE 25-MAR-16 5IZE TITLE HANTAAN VIRUS L PROTEIN CAP-SNATCHING ENDONUCLEASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE L; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PROTEIN L,LARGE STRUCTURAL PROTEIN,REPLICASE,TRANSCRIPTASE; COMPND 5 EC: 2.7.7.48; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: MANGANESE IONS (MN3) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HANTAAN VIRUS; SOURCE 3 ORGANISM_TAXID: 11602; SOURCE 4 STRAIN: 76-118; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IN COMPLEX WITH MANGANESE METAL IONS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.REGUERA,S.CUSACK REVDAT 2 06-SEP-17 5IZE 1 REMARK REVDAT 1 29-JUN-16 5IZE 0 JRNL AUTH J.REGUERA,P.GERLACH,M.ROSENTHAL,S.GAUDON,F.COSCIA,S.GUNTHER, JRNL AUTH 2 S.CUSACK JRNL TITL COMPARATIVE STRUCTURAL AND FUNCTIONAL ANALYSIS OF BUNYAVIRUS JRNL TITL 2 AND ARENAVIRUS CAP-SNATCHING ENDONUCLEASES. JRNL REF PLOS PATHOG. V. 12 05636 2016 JRNL REFN ESSN 1553-7374 JRNL PMID 27304209 JRNL DOI 10.1371/JOURNAL.PPAT.1005636 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 39163 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1991 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.75 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2838 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.53 REMARK 3 BIN R VALUE (WORKING SET) : 0.3570 REMARK 3 BIN FREE R VALUE SET COUNT : 162 REMARK 3 BIN FREE R VALUE : 0.4280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2809 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.40000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : -0.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.083 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.931 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2867 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2797 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3871 ; 1.365 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6471 ; 1.089 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 346 ; 5.844 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 128 ;42.565 ;24.766 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 536 ;13.605 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;19.147 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 437 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3147 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 617 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1393 ; 2.439 ; 2.736 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1392 ; 2.424 ; 2.735 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1736 ; 3.011 ; 4.098 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1737 ; 3.010 ; 4.100 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1474 ; 3.139 ; 3.238 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1475 ; 3.138 ; 3.241 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2136 ; 3.639 ; 4.647 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3385 ; 4.330 ;23.310 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3273 ; 3.948 ;22.576 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5664 ; 3.587 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 104 ;26.215 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5787 ; 9.355 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 0 170 B 0 170 20768 0.07 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5IZE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000217663. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : OTHER REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.984 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41154 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 48.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 3.020 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.75 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 1.03000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES 0.1 M PH7, 20% PEG 6K, 1 M REMARK 280 LICL2, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 316K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.07500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B 165 REMARK 465 SER B 166 REMARK 465 ASN B 167 REMARK 465 TRP B 172 REMARK 465 PRO B 173 REMARK 465 SER B 174 REMARK 465 ARG B 175 REMARK 465 ARG B 176 REMARK 465 ASN B 177 REMARK 465 ASP B 178 REMARK 465 GLY B 179 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1103 O HOH A 1180 1.69 REMARK 500 O HOH A 1178 O HOH A 1222 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 12 -115.05 57.22 REMARK 500 TRP A 47 -53.57 -125.02 REMARK 500 LYS B 12 -115.85 57.30 REMARK 500 TRP B 47 -52.70 -127.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1256 DISTANCE = 6.11 ANGSTROMS REMARK 525 HOH A1257 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH A1258 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH A1259 DISTANCE = 7.85 ANGSTROMS REMARK 525 HOH B1206 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH B1207 DISTANCE = 6.45 ANGSTROMS REMARK 525 HOH B1208 DISTANCE = 7.33 ANGSTROMS REMARK 525 HOH B1209 DISTANCE = 8.22 ANGSTROMS REMARK 525 HOH B1210 DISTANCE = 8.31 ANGSTROMS REMARK 525 HOH B1211 DISTANCE = 9.40 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN3 A1003 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 8 NE2 REMARK 620 2 SER A 15 OG 90.1 REMARK 620 3 GLY A 17 O 76.2 123.0 REMARK 620 4 ASP B 46 OD2 119.6 91.4 143.5 REMARK 620 5 HOH B1123 O 100.4 75.5 160.8 24.5 REMARK 620 6 HOH B1173 O 103.2 158.7 76.9 67.7 85.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN3 A1001 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 36 NE2 REMARK 620 2 ASP A 97 OD2 91.6 REMARK 620 3 GLU A 110 OE2 175.3 85.8 REMARK 620 4 VAL A 111 O 84.8 94.1 91.5 REMARK 620 5 HOH A1198 O 91.2 104.6 93.3 160.9 REMARK 620 6 HOH A1196 O 92.6 175.7 90.2 87.5 74.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN3 A1002 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 54 OE2 REMARK 620 2 ASP A 97 OD1 91.1 REMARK 620 3 HOH A1141 O 89.0 90.1 REMARK 620 4 HOH A1198 O 176.5 91.7 88.8 REMARK 620 5 HOH A1203 O 87.2 91.2 176.0 94.9 REMARK 620 6 HOH A1130 O 78.0 168.9 91.7 99.2 86.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN3 B1003 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 8 NE2 REMARK 620 2 SER B 15 OG 90.1 REMARK 620 3 GLY B 17 O 80.1 125.7 REMARK 620 4 HOH B1107 O 101.3 73.8 160.5 REMARK 620 5 HOH B1117 O 105.3 154.0 78.4 82.5 REMARK 620 6 ASP A 46 OD2 98.0 73.7 160.3 3.3 83.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN3 B1002 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 36 NE2 REMARK 620 2 ASP B 97 OD2 91.3 REMARK 620 3 GLU B 110 OE2 176.2 85.9 REMARK 620 4 VAL B 111 O 86.1 95.3 91.4 REMARK 620 5 HOH B1170 O 93.6 103.7 89.6 161.0 REMARK 620 6 HOH B1163 O 92.4 175.6 90.5 87.3 73.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN3 B1001 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 54 OE2 REMARK 620 2 ASP B 97 OD1 89.9 REMARK 620 3 HOH B1122 O 93.4 90.0 REMARK 620 4 HOH B1170 O 175.0 92.3 82.2 REMARK 620 5 HOH B1174 O 87.2 90.4 179.2 97.2 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN3 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN3 A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN3 A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN3 B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN3 B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN3 B 1003 DBREF 5IZE A 1 179 UNP P23456 L_HANTV 1 179 DBREF 5IZE B 1 179 UNP P23456 L_HANTV 1 179 SEQADV 5IZE GLY A 0 UNP P23456 EXPRESSION TAG SEQADV 5IZE GLY B 0 UNP P23456 EXPRESSION TAG SEQRES 1 A 180 GLY MET ASP LYS TYR ARG GLU ILE HIS ASN LYS LEU LYS SEQRES 2 A 180 GLU PHE SER PRO GLY THR LEU THR ALA VAL GLU CYS ILE SEQRES 3 A 180 ASP TYR LEU ASP ARG LEU TYR ALA VAL ARG HIS ASP ILE SEQRES 4 A 180 VAL ASP GLN MET ILE LYS HIS ASP TRP SER ASP ASN LYS SEQRES 5 A 180 ASP SER GLU GLU ALA ILE GLY LYS VAL LEU LEU PHE ALA SEQRES 6 A 180 GLY VAL PRO SER ASN ILE ILE THR ALA LEU GLU LYS LYS SEQRES 7 A 180 ILE ILE PRO ASN HIS PRO THR GLY LYS SER LEU LYS ALA SEQRES 8 A 180 PHE PHE LYS MET THR PRO ASP ASN TYR LYS ILE SER GLY SEQRES 9 A 180 THR THR ILE GLU PHE VAL GLU VAL THR VAL THR ALA ASP SEQRES 10 A 180 VAL ASP LYS GLY ILE ARG GLU LYS LYS LEU LYS TYR GLU SEQRES 11 A 180 ALA GLY LEU THR TYR ILE GLU GLN GLU LEU HIS LYS PHE SEQRES 12 A 180 PHE LEU LYS GLY GLU ILE PRO GLN PRO TYR LYS ILE THR SEQRES 13 A 180 PHE ASN VAL VAL ALA VAL ARG THR ASP GLY SER ASN ILE SEQRES 14 A 180 THR THR GLN TRP PRO SER ARG ARG ASN ASP GLY SEQRES 1 B 180 GLY MET ASP LYS TYR ARG GLU ILE HIS ASN LYS LEU LYS SEQRES 2 B 180 GLU PHE SER PRO GLY THR LEU THR ALA VAL GLU CYS ILE SEQRES 3 B 180 ASP TYR LEU ASP ARG LEU TYR ALA VAL ARG HIS ASP ILE SEQRES 4 B 180 VAL ASP GLN MET ILE LYS HIS ASP TRP SER ASP ASN LYS SEQRES 5 B 180 ASP SER GLU GLU ALA ILE GLY LYS VAL LEU LEU PHE ALA SEQRES 6 B 180 GLY VAL PRO SER ASN ILE ILE THR ALA LEU GLU LYS LYS SEQRES 7 B 180 ILE ILE PRO ASN HIS PRO THR GLY LYS SER LEU LYS ALA SEQRES 8 B 180 PHE PHE LYS MET THR PRO ASP ASN TYR LYS ILE SER GLY SEQRES 9 B 180 THR THR ILE GLU PHE VAL GLU VAL THR VAL THR ALA ASP SEQRES 10 B 180 VAL ASP LYS GLY ILE ARG GLU LYS LYS LEU LYS TYR GLU SEQRES 11 B 180 ALA GLY LEU THR TYR ILE GLU GLN GLU LEU HIS LYS PHE SEQRES 12 B 180 PHE LEU LYS GLY GLU ILE PRO GLN PRO TYR LYS ILE THR SEQRES 13 B 180 PHE ASN VAL VAL ALA VAL ARG THR ASP GLY SER ASN ILE SEQRES 14 B 180 THR THR GLN TRP PRO SER ARG ARG ASN ASP GLY HET MN3 A1001 1 HET MN3 A1002 1 HET MN3 A1003 1 HET MN3 B1001 1 HET MN3 B1002 1 HET MN3 B1003 1 HETNAM MN3 MANGANESE (III) ION FORMUL 3 MN3 6(MN 3+) FORMUL 9 HOH *270(H2 O) HELIX 1 AA1 GLY A 0 LYS A 12 1 13 HELIX 2 AA2 GLU A 13 SER A 15 5 3 HELIX 3 AA3 THR A 20 TRP A 47 1 28 HELIX 4 AA4 ALA A 56 ALA A 64 1 9 HELIX 5 AA5 PRO A 67 GLU A 75 1 9 HELIX 6 AA6 SER A 87 PHE A 92 1 6 HELIX 7 AA7 ASP A 116 LYS A 145 1 30 HELIX 8 AA8 MET B 1 LYS B 12 1 12 HELIX 9 AA9 GLU B 13 SER B 15 5 3 HELIX 10 AB1 THR B 20 TRP B 47 1 28 HELIX 11 AB2 ALA B 56 ALA B 64 1 9 HELIX 12 AB3 PRO B 67 GLU B 75 1 9 HELIX 13 AB4 SER B 87 PHE B 92 1 6 HELIX 14 AB5 ASP B 116 LYS B 145 1 30 SHEET 1 AA1 5 ASN A 98 SER A 102 0 SHEET 2 AA1 5 THR A 105 THR A 114 -1 O THR A 105 N SER A 102 SHEET 3 AA1 5 LYS A 153 ARG A 162 1 O LYS A 153 N ILE A 106 SHEET 4 AA1 5 ILE A 168 GLN A 171 -1 O THR A 169 N ALA A 160 SHEET 5 AA1 5 ARG A 176 ASN A 177 -1 O ASN A 177 N THR A 170 SHEET 1 AA2 4 ASN B 98 SER B 102 0 SHEET 2 AA2 4 THR B 105 THR B 114 -1 O THR B 105 N SER B 102 SHEET 3 AA2 4 LYS B 153 ARG B 162 1 O LYS B 153 N ILE B 106 SHEET 4 AA2 4 THR B 169 GLN B 171 -1 O THR B 169 N ALA B 160 LINK NE2 HIS A 8 MN MN3 A1003 1555 1555 2.33 LINK OG SER A 15 MN MN3 A1003 1555 1555 2.14 LINK O GLY A 17 MN MN3 A1003 1555 1555 2.44 LINK NE2 HIS A 36 MN MN3 A1001 1555 1555 2.32 LINK OE2 GLU A 54 MN MN3 A1002 1555 1555 2.28 LINK OD1 ASP A 97 MN MN3 A1002 1555 1555 2.20 LINK OD2 ASP A 97 MN MN3 A1001 1555 1555 2.17 LINK OE2 GLU A 110 MN MN3 A1001 1555 1555 2.20 LINK O VAL A 111 MN MN3 A1001 1555 1555 2.19 LINK NE2 HIS B 8 MN MN3 B1003 1555 1555 2.24 LINK OG SER B 15 MN MN3 B1003 1555 1555 2.26 LINK O GLY B 17 MN MN3 B1003 1555 1555 2.28 LINK NE2 HIS B 36 MN MN3 B1002 1555 1555 2.31 LINK OE2 GLU B 54 MN MN3 B1001 1555 1555 2.23 LINK OD1 ASP B 97 MN MN3 B1001 1555 1555 2.27 LINK OD2 ASP B 97 MN MN3 B1002 1555 1555 2.19 LINK OE2 GLU B 110 MN MN3 B1002 1555 1555 2.22 LINK O VAL B 111 MN MN3 B1002 1555 1555 2.15 LINK MN MN3 A1001 O HOH A1198 1555 1555 2.19 LINK MN MN3 A1001 O HOH A1196 1555 1555 2.23 LINK MN MN3 A1002 O HOH A1141 1555 1555 2.28 LINK MN MN3 A1002 O HOH A1198 1555 1555 2.14 LINK MN MN3 A1002 O HOH A1203 1555 1555 2.37 LINK MN MN3 A1002 O HOH A1130 1555 1555 2.15 LINK MN MN3 B1001 O HOH B1122 1555 1555 2.33 LINK MN MN3 B1001 O HOH B1170 1555 1555 2.12 LINK MN MN3 B1001 O HOH B1174 1555 1555 2.41 LINK MN MN3 B1002 O HOH B1170 1555 1555 2.25 LINK MN MN3 B1002 O HOH B1163 1555 1555 2.21 LINK MN MN3 B1003 O HOH B1107 1555 1555 2.21 LINK MN MN3 B1003 O HOH B1117 1555 1555 2.16 LINK OD2 ASP A 46 MN MN3 B1003 1555 2656 2.14 LINK OD2 ASP B 46 MN MN3 A1003 1555 2646 2.18 LINK MN MN3 A1003 O HOH B1123 1555 2656 2.22 LINK MN MN3 A1003 O HOH B1173 1555 2656 2.17 SITE 1 AC1 6 HIS A 36 ASP A 97 GLU A 110 VAL A 111 SITE 2 AC1 6 HOH A1196 HOH A1198 SITE 1 AC2 6 GLU A 54 ASP A 97 HOH A1130 HOH A1141 SITE 2 AC2 6 HOH A1198 HOH A1203 SITE 1 AC3 3 HIS A 8 SER A 15 GLY A 17 SITE 1 AC4 5 GLU B 54 ASP B 97 HOH B1122 HOH B1170 SITE 2 AC4 5 HOH B1174 SITE 1 AC5 6 HIS B 36 ASP B 97 GLU B 110 VAL B 111 SITE 2 AC5 6 HOH B1163 HOH B1170 SITE 1 AC6 5 HIS B 8 SER B 15 GLY B 17 HOH B1107 SITE 2 AC6 5 HOH B1117 CRYST1 41.200 76.150 63.720 90.00 103.97 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024272 0.000000 0.006038 0.00000 SCALE2 0.000000 0.013132 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016172 0.00000