HEADER TRANSPORT PROTEIN 26-MAR-16 5IZZ TITLE CRYSTAL STRUCTURE OF A MARINE METAGENOME TRAP SOLUTE BINDING PROTEIN TITLE 2 SPECIFIC FOR AROMATIC ACID LIGANDS (SORCERER II GLOBAL OCEAN SAMPLING TITLE 3 EXPEDITION, UNIDENTIFIED MICROBE, LOCUS TAG GOS_1523157, TRIPLE TITLE 4 SURFACE MUTANT K158A_K223A_K313A) IN COMPLEX WITH TITLE 5 METAHYDROXYPHENYLACETATE, THERMAL EXCHANGE OF LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRAP TRANSPORTER SOLUTE BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: UNCULTURED BACTERIUM; SOURCE 3 ORGANISM_TAXID: 77133; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS TRANSPORT PROTEIN, ENZYME FUNCTION INITIATIVE, EFI EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,N.F.AL OBAIDI,S.L.HOGLE,C.L.DUPONT,S.C.ALMO REVDAT 2 27-SEP-23 5IZZ 1 REMARK REVDAT 1 18-JAN-17 5IZZ 0 JRNL AUTH M.W.VETTING,N.F.AL OBAIDI,S.L.HOGLE,C.L.DUPONT,S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF A MARINE METAGENOME TRAP SOLUTE BINDING JRNL TITL 2 PROTEIN SPECIFIC FOR AROMATIC ACID LIGANDS (SORCERER II JRNL TITL 3 GLOBAL OCEAN SAMPLING EXPEDITION, UNIDENTIFIED MICROBE, JRNL TITL 4 LOCUS TAG GOS_1523157, TRIPLE SURFACE MUTANT JRNL TITL 5 K158A_K223A_K313A) IN COMPLEX WITH METAHYDROXYPHENYLACETATE, JRNL TITL 6 THERMAL EXCHANGE OF LIGAND JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 34431 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.117 REMARK 3 R VALUE (WORKING SET) : 0.115 REMARK 3 FREE R VALUE : 0.153 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1724 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7910 - 3.6611 1.00 2956 145 0.1181 0.1518 REMARK 3 2 3.6611 - 2.9067 1.00 2922 143 0.1115 0.1534 REMARK 3 3 2.9067 - 2.5395 1.00 2909 149 0.1113 0.1369 REMARK 3 4 2.5395 - 2.3074 0.99 2883 138 0.1026 0.1292 REMARK 3 5 2.3074 - 2.1421 0.99 2870 150 0.1029 0.1401 REMARK 3 6 2.1421 - 2.0158 0.98 2845 158 0.1053 0.1656 REMARK 3 7 2.0158 - 1.9149 0.96 2778 141 0.1121 0.1669 REMARK 3 8 1.9149 - 1.8315 0.93 2679 145 0.1204 0.1527 REMARK 3 9 1.8315 - 1.7610 0.90 2601 154 0.1225 0.1639 REMARK 3 10 1.7610 - 1.7003 0.87 2484 146 0.1310 0.1713 REMARK 3 11 1.7003 - 1.6471 0.84 2425 132 0.1381 0.1693 REMARK 3 12 1.6471 - 1.6000 0.81 2355 123 0.1507 0.1921 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 13.350 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 8.81 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 13.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2525 REMARK 3 ANGLE : 0.990 3415 REMARK 3 CHIRALITY : 0.056 379 REMARK 3 PLANARITY : 0.008 438 REMARK 3 DIHEDRAL : 15.395 1524 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 25 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7254 -10.4929 3.1363 REMARK 3 T TENSOR REMARK 3 T11: 0.0511 T22: 0.0500 REMARK 3 T33: 0.0749 T12: 0.0041 REMARK 3 T13: 0.0171 T23: 0.0082 REMARK 3 L TENSOR REMARK 3 L11: 2.0162 L22: 0.5659 REMARK 3 L33: 1.0167 L12: -0.0151 REMARK 3 L13: 0.4985 L23: 0.0194 REMARK 3 S TENSOR REMARK 3 S11: 0.0328 S12: 0.0746 S13: -0.1569 REMARK 3 S21: -0.0957 S22: -0.0621 S23: -0.1636 REMARK 3 S31: 0.0424 S32: 0.0638 S33: 0.0303 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5568 -13.3378 8.3009 REMARK 3 T TENSOR REMARK 3 T11: 0.0472 T22: 0.0523 REMARK 3 T33: 0.0532 T12: -0.0092 REMARK 3 T13: 0.0002 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.2949 L22: 2.1256 REMARK 3 L33: 0.8924 L12: -0.9102 REMARK 3 L13: -0.2293 L23: 0.4620 REMARK 3 S TENSOR REMARK 3 S11: -0.0248 S12: 0.0085 S13: -0.0932 REMARK 3 S21: 0.0483 S22: 0.0061 S23: 0.0612 REMARK 3 S31: 0.0485 S32: -0.1018 S33: 0.0179 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.7526 4.6134 10.2574 REMARK 3 T TENSOR REMARK 3 T11: 0.0424 T22: 0.0466 REMARK 3 T33: 0.0405 T12: -0.0079 REMARK 3 T13: 0.0001 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.6367 L22: 0.8877 REMARK 3 L33: 0.5743 L12: -0.3174 REMARK 3 L13: 0.0626 L23: -0.1985 REMARK 3 S TENSOR REMARK 3 S11: -0.0023 S12: -0.0100 S13: 0.0099 REMARK 3 S21: 0.0217 S22: 0.0029 S23: 0.0382 REMARK 3 S31: -0.0005 S32: -0.0435 S33: -0.0050 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 264 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5130 -13.1230 15.5444 REMARK 3 T TENSOR REMARK 3 T11: 0.0672 T22: 0.0689 REMARK 3 T33: 0.0951 T12: 0.0017 REMARK 3 T13: -0.0186 T23: 0.0262 REMARK 3 L TENSOR REMARK 3 L11: 1.6913 L22: 1.8694 REMARK 3 L33: 0.6675 L12: -0.8647 REMARK 3 L13: 0.1892 L23: -0.2618 REMARK 3 S TENSOR REMARK 3 S11: 0.0027 S12: -0.1240 S13: -0.0904 REMARK 3 S21: 0.0836 S22: -0.0654 S23: -0.2269 REMARK 3 S31: 0.0354 S32: 0.0991 S33: 0.0468 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 265 THROUGH 288 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.6630 7.9465 4.5754 REMARK 3 T TENSOR REMARK 3 T11: 0.0439 T22: 0.0582 REMARK 3 T33: 0.0606 T12: 0.0021 REMARK 3 T13: 0.0071 T23: 0.0091 REMARK 3 L TENSOR REMARK 3 L11: 2.5418 L22: 1.4909 REMARK 3 L33: 3.8177 L12: -1.3975 REMARK 3 L13: 2.5705 L23: -1.6064 REMARK 3 S TENSOR REMARK 3 S11: -0.0144 S12: 0.1666 S13: 0.1841 REMARK 3 S21: 0.0065 S22: -0.1282 S23: -0.1705 REMARK 3 S31: -0.0638 S32: 0.1618 S33: 0.1383 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 289 THROUGH 342 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.5472 10.2408 21.6460 REMARK 3 T TENSOR REMARK 3 T11: 0.1292 T22: 0.0855 REMARK 3 T33: 0.0728 T12: -0.0147 REMARK 3 T13: 0.0089 T23: -0.0192 REMARK 3 L TENSOR REMARK 3 L11: 0.4123 L22: 0.7704 REMARK 3 L33: 0.9599 L12: -0.4738 REMARK 3 L13: 0.0777 L23: -0.1635 REMARK 3 S TENSOR REMARK 3 S11: -0.1079 S12: -0.1146 S13: 0.0240 REMARK 3 S21: 0.2404 S22: 0.0711 S23: 0.0065 REMARK 3 S31: -0.0029 S32: -0.1136 S33: 0.0277 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5IZZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219732. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54056 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 200K REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34550 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.05200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.80 REMARK 200 R MERGE FOR SHELL (I) : 0.26500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5I7I REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (10 MM HEPES PH 7.5, 5 MM DTT, REMARK 280 10 MM 3-HYDROXYPHENYLACETIC ACID, SOAK 30 MINUTES AT 60 C); REMARK 280 RESERVOIR (MCSG1 (A2), 0.1 M CHES PH 9.5, 30 %(W/V) PEG 3000); REMARK 280 CRYOPROTECTION (20% DIETHYLENE GLYCOL, 80% RESERVOIR), PH 8.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 42.13750 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 SER A 9 REMARK 465 SER A 10 REMARK 465 GLY A 11 REMARK 465 VAL A 12 REMARK 465 ASP A 13 REMARK 465 LEU A 14 REMARK 465 GLY A 15 REMARK 465 THR A 16 REMARK 465 GLU A 17 REMARK 465 ASN A 18 REMARK 465 LEU A 19 REMARK 465 TYR A 20 REMARK 465 PHE A 21 REMARK 465 GLN A 22 REMARK 465 SER A 23 REMARK 465 MET A 24 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ2 LYS A 73 O HOH A 503 1.52 REMARK 500 O HOH A 774 O HOH A 863 1.94 REMARK 500 O HOH A 843 O HOH A 863 2.00 REMARK 500 O HOH A 767 O HOH A 842 2.05 REMARK 500 O HOH A 540 O HOH A 815 2.09 REMARK 500 O HOH A 804 O HOH A 877 2.10 REMARK 500 O HOH A 890 O HOH A 919 2.12 REMARK 500 O HOH A 515 O HOH A 801 2.12 REMARK 500 O HOH A 791 O HOH A 905 2.13 REMARK 500 O HOH A 704 O HOH A 717 2.13 REMARK 500 O HOH A 501 O HOH A 815 2.15 REMARK 500 O HOH A 574 O HOH A 829 2.15 REMARK 500 O HOH A 799 O HOH A 956 2.15 REMARK 500 O HOH A 507 O HOH A 673 2.16 REMARK 500 O HOH A 867 O HOH A 920 2.18 REMARK 500 O HOH A 798 O HOH A 816 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 862 O HOH A 934 2646 1.99 REMARK 500 O HOH A 770 O HOH A 912 1554 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 44 -68.53 -134.34 REMARK 500 ALA A 113 -148.08 -96.13 REMARK 500 THR A 128 -100.85 -122.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 963 DISTANCE = 6.58 ANGSTROMS REMARK 525 HOH A 964 DISTANCE = 6.72 ANGSTROMS REMARK 525 HOH A 965 DISTANCE = 6.82 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3HP A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 406 DBREF 5IZZ A 2 342 PDB 5IZZ 5IZZ 2 342 SEQRES 1 A 341 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 341 GLY THR GLU ASN LEU TYR PHE GLN SER MET GLU VAL VAL SEQRES 3 A 341 LEU LYS PHE HIS SER PHE PRO PRO MET PRO ALA ASN SER SEQRES 4 A 341 ASN ALA LYS PHE VAL LYS PRO TRP SER GLU LYS VAL LEU SEQRES 5 A 341 ALA GLU SER ASN GLY GLU ILE LYS VAL GLU ILE TYR PRO SEQRES 6 A 341 ALA MET GLN LEU GLY GLY LYS PRO PRO GLN LEU VAL ASP SEQRES 7 A 341 GLN VAL ARG ASP GLY VAL VAL ASP ILE VAL TRP THR VAL SEQRES 8 A 341 ALA GLY TYR THR PRO GLY ARG PHE PRO HIS LEU GLU ALA SEQRES 9 A 341 PHE GLU LEU PRO PHE MET PRO ALA SER ALA GLU ALA THR SEQRES 10 A 341 SER GLN ALA LEU GLN GLU TYR VAL ASP THR VAL ALA ALA SEQRES 11 A 341 SER ASP LEU LYS ASP TYR LYS VAL LEU ALA VAL PHE CYS SEQRES 12 A 341 HIS ALA PRO GLY LYS ILE HIS THR LYS GLU LYS VAL ILE SEQRES 13 A 341 ALA SER ALA ALA ASP LEU ASN GLY MET LYS MET ARG GLY SEQRES 14 A 341 PRO THR ARG VAL ILE THR LYS MET LEU GLU GLY LEU GLY SEQRES 15 A 341 ALA THR PRO VAL GLY MET PRO VAL PRO ALA VAL ALA GLY SEQRES 16 A 341 ALA LEU SER LYS GLY VAL ILE ASP GLY MET VAL VAL PRO SEQRES 17 A 341 TRP GLU ILE MET PRO SER PHE LYS LEU HIS GLU LEU THR SEQRES 18 A 341 ALA ALA HIS THR THR VAL SER GLY SER ARG GLY LEU TYR SEQRES 19 A 341 THR THR PRO PHE LEU PHE LEU MET ASN LYS ALA LYS TYR SEQRES 20 A 341 GLU SER LEU SER ASP GLU HIS LYS LYS VAL ILE ASP ASN SEQRES 21 A 341 ASN ALA GLY LEU ALA LEU ALA LYS LEU ALA GLY GLN LEU SEQRES 22 A 341 TRP ASP GLY PHE GLU VAL PRO ALA ARG LYS LEU ALA LEU SEQRES 23 A 341 ASP ALA GLY GLY THR ILE HIS SER LEU SER GLY GLY PRO SEQRES 24 A 341 LEU ALA GLU MET LYS ALA ALA GLY GLU GLY LEU GLU ALA SEQRES 25 A 341 ASP TRP ILE LYS SER ALA ASN ASP ARG GLY LEU ASP GLY SEQRES 26 A 341 ALA MET LEU VAL LYS THR ALA LYS ASP LEU ILE SER LYS SEQRES 27 A 341 TYR ASP LYS HET 3HP A 401 18 HET PEG A 402 17 HET PEG A 403 17 HET PEG A 404 17 HET PEG A 405 17 HET PEG A 406 17 HETNAM 3HP 3-HYDROXYPHENYLACETATE HETNAM PEG DI(HYDROXYETHYL)ETHER FORMUL 2 3HP C8 H8 O3 FORMUL 3 PEG 5(C4 H10 O3) FORMUL 8 HOH *465(H2 O) HELIX 1 AA1 ALA A 38 LYS A 43 1 6 HELIX 2 AA2 PHE A 44 SER A 56 1 13 HELIX 3 AA3 LYS A 73 PRO A 75 5 3 HELIX 4 AA4 GLN A 76 ASP A 83 1 8 HELIX 5 AA5 GLY A 94 THR A 96 5 3 HELIX 6 AA6 PHE A 100 LEU A 108 5 9 HELIX 7 AA7 SER A 114 THR A 128 1 15 HELIX 8 AA8 ALA A 130 LYS A 135 5 6 HELIX 9 AA9 SER A 159 ASN A 164 5 6 HELIX 10 AB1 THR A 172 LEU A 182 1 11 HELIX 11 AB2 PRO A 190 PRO A 192 5 3 HELIX 12 AB3 ALA A 193 LYS A 200 1 8 HELIX 13 AB4 MET A 213 PHE A 216 5 4 HELIX 14 AB5 LYS A 217 THR A 222 1 6 HELIX 15 AB6 LYS A 245 LEU A 251 1 7 HELIX 16 AB7 SER A 252 ASN A 262 1 11 HELIX 17 AB8 GLY A 264 ALA A 289 1 26 HELIX 18 AB9 SER A 297 ARG A 322 1 26 HELIX 19 AC1 ASP A 325 ASP A 341 1 17 SHEET 1 AA1 5 ILE A 60 TYR A 65 0 SHEET 2 AA1 5 VAL A 26 HIS A 31 1 N PHE A 30 O GLU A 63 SHEET 3 AA1 5 ILE A 88 VAL A 92 1 O ILE A 88 N HIS A 31 SHEET 4 AA1 5 PRO A 238 ASN A 244 -1 O LEU A 240 N THR A 91 SHEET 5 AA1 5 TYR A 137 CYS A 144 -1 N PHE A 143 O PHE A 239 SHEET 1 AA2 6 THR A 185 GLY A 188 0 SHEET 2 AA2 6 LYS A 167 GLY A 170 1 N GLY A 170 O VAL A 187 SHEET 3 AA2 6 GLY A 205 VAL A 208 1 O GLY A 205 N ARG A 169 SHEET 4 AA2 6 LYS A 149 THR A 152 -1 N HIS A 151 O MET A 206 SHEET 5 AA2 6 ALA A 224 VAL A 228 -1 O THR A 226 N ILE A 150 SHEET 6 AA2 6 THR A 292 LEU A 296 1 O LEU A 296 N THR A 227 SITE 1 AC1 11 TYR A 95 HIS A 145 ARG A 169 PRO A 171 SITE 2 AC1 11 VAL A 191 VAL A 208 PRO A 209 GLU A 211 SITE 3 AC1 11 ILE A 212 PHE A 239 HOH A 563 SITE 1 AC2 7 PHE A 44 TRP A 48 LYS A 51 VAL A 187 SITE 2 AC2 7 LEU A 274 HOH A 557 HOH A 600 SITE 1 AC3 8 PRO A 171 ARG A 173 MET A 189 PRO A 190 SITE 2 AC3 8 ASN A 261 PEG A 404 HOH A 514 HOH A 761 SITE 1 AC4 8 ARG A 173 THR A 176 LYS A 177 GLU A 180 SITE 2 AC4 8 PRO A 186 GLY A 188 PEG A 403 HOH A 562 SITE 1 AC5 7 GLN A 120 LYS A 177 GLU A 180 ALA A 266 SITE 2 AC5 7 ASP A 314 HOH A 586 HOH A 590 SITE 1 AC6 4 GLU A 50 ALA A 54 HOH A 542 HOH A 615 CRYST1 39.784 84.275 45.910 90.00 113.48 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025136 0.000000 0.010917 0.00000 SCALE2 0.000000 0.011866 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023748 0.00000