HEADER HYDROLASE 29-MAR-16 5J1K TITLE CRYSTAL STRUCTURE OF CSD2-CSD2 DIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: TOXR-ACTIVATED GENE (TAGE); COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 125-308; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HELICOBACTER PYLORI; SOURCE 3 ORGANISM_TAXID: 85962; SOURCE 4 STRAIN: ATCC 700392 / 26695; SOURCE 5 GENE: HP_1544; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS M23B FAMILY METALLOPEPTIDASE, HOMODIMER, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR D.R.AN,S.W.SUH REVDAT 2 20-MAR-24 5J1K 1 REMARK REVDAT 1 19-OCT-16 5J1K 0 JRNL AUTH D.R.AN,H.N.IM,J.Y.JANG,H.S.KIM,J.KIM,H.J.YOON,D.HESEK,M.LEE, JRNL AUTH 2 S.MOBASHERY,S.J.KIM,S.W.SUH JRNL TITL STRUCTURAL BASIS OF THE HETERODIMER FORMATION BETWEEN CELL JRNL TITL 2 SHAPE-DETERMINING PROTEINS CSD1 AND CSD2 FROM HELICOBACTER JRNL TITL 3 PYLORI JRNL REF PLOS ONE V. 11 64243 2016 JRNL REFN ESSN 1932-6203 JRNL PMID 27711177 JRNL DOI 10.1371/JOURNAL.PONE.0164243 REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0123 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 20898 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1130 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.81 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1485 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.2000 REMARK 3 BIN FREE R VALUE SET COUNT : 77 REMARK 3 BIN FREE R VALUE : 0.2130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1457 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 12 REMARK 3 SOLVENT ATOMS : 97 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.08000 REMARK 3 B22 (A**2) : 0.08000 REMARK 3 B33 (A**2) : -0.25000 REMARK 3 B12 (A**2) : 0.04000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.109 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.110 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.114 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1504 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1452 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2031 ; 1.428 ; 1.946 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3344 ; 0.928 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 181 ; 6.577 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 71 ;34.417 ;25.211 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 261 ;12.320 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ;17.463 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 221 ; 0.102 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1691 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 354 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 727 ; 1.480 ; 1.959 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 726 ; 1.474 ; 1.951 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 907 ; 2.363 ; 2.917 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 908 ; 2.363 ; 2.927 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 777 ; 2.472 ; 2.475 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 777 ; 2.469 ; 2.475 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1125 ; 4.062 ; 3.564 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1690 ; 5.825 ;16.926 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1690 ; 5.825 ;16.928 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5J1K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-MAR-16. REMARK 100 THE DEPOSITION ID IS D_1000219660. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97960 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22028 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 16.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 47.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 17.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, JEFFAMINE ED-2001, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 13.41467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 26.82933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 20.12200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 33.53667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 6.70733 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 13.41467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 26.82933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 33.53667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 20.12200 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 6.70733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3900 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -13.41467 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 101 REMARK 465 GLY A 102 REMARK 465 SER A 103 REMARK 465 SER A 104 REMARK 465 HIS A 105 REMARK 465 HIS A 106 REMARK 465 HIS A 107 REMARK 465 HIS A 108 REMARK 465 HIS A 109 REMARK 465 HIS A 110 REMARK 465 SER A 111 REMARK 465 SER A 112 REMARK 465 GLY A 113 REMARK 465 LEU A 114 REMARK 465 VAL A 115 REMARK 465 PRO A 116 REMARK 465 ARG A 117 REMARK 465 GLY A 118 REMARK 465 SER A 119 REMARK 465 LYS A 302 REMARK 465 ASP A 303 REMARK 465 ALA A 304 REMARK 465 LEU A 305 REMARK 465 ILE A 306 REMARK 465 SER A 307 REMARK 465 GLN A 308 REMARK 465 LEU A 309 REMARK 465 GLU A 310 REMARK 465 HIS A 311 REMARK 465 HIS A 312 REMARK 465 HIS A 313 REMARK 465 HIS A 314 REMARK 465 HIS A 315 REMARK 465 HIS A 316 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 123 54.78 -119.45 REMARK 500 SER A 166 29.07 -154.54 REMARK 500 ASN A 192 57.12 -144.40 REMARK 500 LYS A 224 -1.94 76.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5J1M RELATED DB: PDB REMARK 900 RELATED ID: 5J1L RELATED DB: PDB DBREF 5J1K A 125 308 UNP O26069 O26069_HELPY 125 308 SEQADV 5J1K MET A 101 UNP O26069 INITIATING METHIONINE SEQADV 5J1K GLY A 102 UNP O26069 EXPRESSION TAG SEQADV 5J1K SER A 103 UNP O26069 EXPRESSION TAG SEQADV 5J1K SER A 104 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 105 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 106 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 107 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 108 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 109 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 110 UNP O26069 EXPRESSION TAG SEQADV 5J1K SER A 111 UNP O26069 EXPRESSION TAG SEQADV 5J1K SER A 112 UNP O26069 EXPRESSION TAG SEQADV 5J1K GLY A 113 UNP O26069 EXPRESSION TAG SEQADV 5J1K LEU A 114 UNP O26069 EXPRESSION TAG SEQADV 5J1K VAL A 115 UNP O26069 EXPRESSION TAG SEQADV 5J1K PRO A 116 UNP O26069 EXPRESSION TAG SEQADV 5J1K ARG A 117 UNP O26069 EXPRESSION TAG SEQADV 5J1K GLY A 118 UNP O26069 EXPRESSION TAG SEQADV 5J1K SER A 119 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 120 UNP O26069 EXPRESSION TAG SEQADV 5J1K LEU A 121 UNP O26069 EXPRESSION TAG SEQADV 5J1K ASP A 122 UNP O26069 EXPRESSION TAG SEQADV 5J1K ASN A 123 UNP O26069 EXPRESSION TAG SEQADV 5J1K LEU A 124 UNP O26069 EXPRESSION TAG SEQADV 5J1K LEU A 309 UNP O26069 EXPRESSION TAG SEQADV 5J1K GLU A 310 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 311 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 312 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 313 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 314 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 315 UNP O26069 EXPRESSION TAG SEQADV 5J1K HIS A 316 UNP O26069 EXPRESSION TAG SEQRES 1 A 216 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 216 LEU VAL PRO ARG GLY SER HIS LEU ASP ASN LEU ASN LEU SEQRES 3 A 216 ALA GLN LYS HIS LEU ALA LEU MET LEU ILE PRO ASN GLY SEQRES 4 A 216 MET PRO ILE LYS THR TYR SER ALA ILE LYS PRO THR LYS SEQRES 5 A 216 GLU ARG ASN HIS PRO ILE LYS LYS ILE LYS GLY VAL GLU SEQRES 6 A 216 SER GLY ILE ASP PHE ILE ALA PRO LEU ASN THR PRO VAL SEQRES 7 A 216 TYR ALA SER ALA ASP GLY ILE VAL ASP PHE VAL LYS THR SEQRES 8 A 216 ASN SER ASN VAL GLY TYR GLY ASN LEU VAL ARG ILE GLU SEQRES 9 A 216 HIS ALA PHE GLY PHE SER SER ILE TYR THR HIS LEU ASP SEQRES 10 A 216 HIS VAL ASN VAL GLN PRO LYS SER PHE ILE GLN LYS GLY SEQRES 11 A 216 GLN LEU ILE GLY TYR SER GLY LYS SER GLY ASN SER GLY SEQRES 12 A 216 GLY GLU LYS LEU HIS TYR GLU VAL ARG PHE LEU GLY LYS SEQRES 13 A 216 ILE LEU ASP ALA GLN LYS PHE LEU ALA TRP ASP LEU ASP SEQRES 14 A 216 HIS PHE GLN SER ALA LEU GLU GLU ASN LYS PHE ILE GLU SEQRES 15 A 216 TRP LYS ASN LEU PHE TRP VAL LEU GLU ASP ILE VAL GLN SEQRES 16 A 216 LEU GLN GLU HIS VAL ASP LYS ASP ALA LEU ILE SER GLN SEQRES 17 A 216 LEU GLU HIS HIS HIS HIS HIS HIS HET GOL A 401 6 HET GOL A 402 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 HOH *97(H2 O) HELIX 1 AA1 ASN A 125 ILE A 136 1 12 HELIX 2 AA2 LYS A 152 ARG A 154 5 3 HELIX 3 AA3 ASP A 259 ALA A 265 1 7 HELIX 4 AA4 ASP A 267 HIS A 270 5 4 HELIX 5 AA5 PHE A 271 GLU A 276 1 6 HELIX 6 AA6 GLU A 282 ASP A 301 1 20 SHEET 1 AA1 7 ALA A 147 PRO A 150 0 SHEET 2 AA1 7 ILE A 168 ILE A 171 -1 O ASP A 169 N LYS A 149 SHEET 3 AA1 7 LYS A 246 PHE A 253 -1 O TYR A 249 N ILE A 168 SHEET 4 AA1 7 PHE A 209 LEU A 216 -1 N THR A 214 O HIS A 248 SHEET 5 AA1 7 ASN A 199 GLU A 204 -1 N ILE A 203 O SER A 211 SHEET 6 AA1 7 GLY A 184 LYS A 190 -1 N ILE A 185 O GLU A 204 SHEET 7 AA1 7 PHE A 226 ILE A 227 -1 O ILE A 227 N GLY A 184 SHEET 1 AA2 4 ALA A 147 PRO A 150 0 SHEET 2 AA2 4 ILE A 168 ILE A 171 -1 O ASP A 169 N LYS A 149 SHEET 3 AA2 4 LYS A 246 PHE A 253 -1 O TYR A 249 N ILE A 168 SHEET 4 AA2 4 LYS A 256 ILE A 257 -1 O LYS A 256 N PHE A 253 SHEET 1 AA3 3 PRO A 177 TYR A 179 0 SHEET 2 AA3 3 LEU A 232 TYR A 235 -1 O ILE A 233 N VAL A 178 SHEET 3 AA3 3 HIS A 218 VAL A 219 -1 N HIS A 218 O TYR A 235 SITE 1 AC1 5 LYS A 143 HIS A 270 GLN A 272 HOH A 504 SITE 2 AC1 5 HOH A 566 SITE 1 AC2 2 THR A 191 ASN A 192 CRYST1 140.772 140.772 40.244 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007104 0.004101 0.000000 0.00000 SCALE2 0.000000 0.008203 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024848 0.00000