HEADER TRANSFERASE 15-APR-16 5JCW TITLE CRYSTAL STRUCTURE OF HGSTP1-1 WITH GLUTATHIONE ADDUCT OF PHENETHYL TITLE 2 ISOTHIOCYANATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE P; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GST CLASS-PI,GSTP1-1; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSTP1, FAEES3, GST3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET9A KEYWDS GST, PEITC, GLUTATHIONE ADDUCT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.KUMARI,X.JI REVDAT 3 27-SEP-23 5JCW 1 REMARK REVDAT 2 30-AUG-23 5JCW 1 AUTHOR JRNL REMARK LINK REVDAT 1 12-OCT-16 5JCW 0 JRNL AUTH V.KUMARI,M.A.DYBA,R.J.HOLLAND,Y.H.LIANG,S.V.SINGH,X.JI JRNL TITL IRREVERSIBLE INHIBITION OF GLUTATHIONE S-TRANSFERASE BY JRNL TITL 2 PHENETHYL ISOTHIOCYANATE (PEITC), A DIETARY CANCER JRNL TITL 3 CHEMOPREVENTIVE PHYTOCHEMICAL. JRNL REF PLOS ONE V. 11 63821 2016 JRNL REFN ESSN 1932-6203 JRNL PMID 27684484 JRNL DOI 10.1371/JOURNAL.PONE.0163821 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH X.JI,J.BLASZCZYK,B.XIAO,R.O'DONNELL,X.HU,C.HERZOG,S.V.SINGH, REMARK 1 AUTH 2 P.ZIMNIAK REMARK 1 TITL STRUCTURE AND FUNCTION OF RESIDUE 104 AND WATER MOLECULES IN REMARK 1 TITL 2 THE XENOBIOTIC SUBSTRATE-BINDING SITE IN HUMAN GLUTATHIONE REMARK 1 TITL 3 S-TRANSFERASE P1-1. REMARK 1 REF BIOCHEMISTRY V. 38 10231 1999 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 10441116 REMARK 2 REMARK 2 RESOLUTION. 1.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 34544 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.155 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.890 REMARK 3 FREE R VALUE TEST SET COUNT : 1000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.9845 - 3.7200 1.00 4875 145 0.1405 0.1654 REMARK 3 2 3.7200 - 2.9531 1.00 4817 144 0.1434 0.1753 REMARK 3 3 2.9531 - 2.5800 1.00 4792 143 0.1550 0.2050 REMARK 3 4 2.5800 - 2.3441 1.00 4828 144 0.1495 0.2051 REMARK 3 5 2.3441 - 2.1761 1.00 4767 142 0.1561 0.2229 REMARK 3 6 2.1761 - 2.0478 1.00 4808 143 0.1815 0.2132 REMARK 3 7 2.0478 - 1.9453 0.98 4657 139 0.2246 0.2839 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.200 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3476 REMARK 3 ANGLE : 1.046 4716 REMARK 3 CHIRALITY : 0.046 519 REMARK 3 PLANARITY : 0.005 609 REMARK 3 DIHEDRAL : 16.421 1286 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JCW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000220229. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34554 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.945 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.700 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 17.1100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.02 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.30 REMARK 200 R MERGE FOR SHELL (I) : 0.54100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.210 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3PGT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, MES, CA(OAC)2, PH 6.0, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 39.18250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.47150 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 39.18250 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 44.47150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4770 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -110.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 635 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN B 209 O HOH B 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 64 114.25 86.09 REMARK 500 LEU A 78 55.04 -118.82 REMARK 500 TYR A 79 27.17 -141.33 REMARK 500 ASN A 110 30.18 -159.86 REMARK 500 THR A 141 -97.70 -123.52 REMARK 500 GLN B 64 112.29 85.54 REMARK 500 LEU B 78 53.75 -119.55 REMARK 500 TYR B 79 29.35 -143.21 REMARK 500 ASN B 110 33.91 -161.20 REMARK 500 THR B 141 -95.00 -116.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TRP A 28 O REMARK 620 2 HOH A 458 O 115.2 REMARK 620 3 HOH A 538 O 153.5 72.7 REMARK 620 4 HOH A 546 O 86.8 68.1 72.5 REMARK 620 5 HOH A 564 O 79.1 131.7 77.7 67.0 REMARK 620 6 HOH A 592 O 84.7 150.4 99.5 138.0 71.0 REMARK 620 7 ASP B 171 OD2 38.8 78.5 148.0 84.1 113.2 112.5 REMARK 620 8 HOH B 591 O 134.2 109.4 52.3 120.0 79.2 50.0 155.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 30 O REMARK 620 2 HOH A 570 O 18.3 REMARK 620 3 HOH A 576 O 17.1 2.9 REMARK 620 4 ASP B 171 OD1 21.5 5.5 4.6 REMARK 620 5 HOH B 512 O 20.7 2.8 3.8 3.2 REMARK 620 6 HOH B 546 O 17.0 3.6 0.7 4.5 4.2 REMARK 620 7 HOH B 568 O 18.6 6.0 3.5 3.5 5.3 2.9 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 77 O REMARK 620 2 GLN A 147 OE1 141.7 REMARK 620 3 HOH A 470 O 89.9 95.7 REMARK 620 4 HOH A 531 O 68.9 73.2 89.5 REMARK 620 5 HOH A 549 O 144.7 73.2 91.8 146.3 REMARK 620 6 HOH A 556 O 75.1 141.8 94.0 143.8 69.6 REMARK 620 7 HOH A 575 O 83.1 92.3 171.9 91.7 91.6 80.4 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 307 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 113 O REMARK 620 2 ASP A 116 OD1 87.3 REMARK 620 3 HOH A 405 O 59.3 111.8 REMARK 620 4 HOH A 553 O 133.9 97.6 76.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 171 OD1 REMARK 620 2 HOH A 401 O 58.8 REMARK 620 3 HOH A 479 O 77.7 124.5 REMARK 620 4 HOH A 573 O 104.7 71.2 90.5 REMARK 620 5 GLU B 30 O 78.7 93.1 42.4 50.7 REMARK 620 6 HOH B 513 O 125.7 80.4 154.3 92.7 142.4 REMARK 620 7 HOH B 582 O 153.9 147.1 82.4 92.1 97.8 72.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 171 OD2 REMARK 620 2 TRP B 28 O 98.2 REMARK 620 3 HOH B 477 O 100.8 5.2 REMARK 620 4 HOH B 560 O 97.3 3.8 3.6 REMARK 620 5 HOH B 567 O 97.0 1.6 5.2 2.7 REMARK 620 6 HOH B 572 O 100.0 3.7 1.6 2.7 3.7 REMARK 620 7 HOH B 585 O 100.0 2.1 5.7 5.5 3.7 4.3 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 77 O REMARK 620 2 GLN B 147 OE1 138.9 REMARK 620 3 HOH B 489 O 72.5 66.4 REMARK 620 4 HOH B 523 O 92.9 93.0 96.0 REMARK 620 5 HOH B 528 O 73.0 146.0 143.5 97.2 REMARK 620 6 HOH B 539 O 146.9 74.2 140.6 83.7 74.8 REMARK 620 7 HOH B 587 O 87.3 84.3 80.5 176.2 86.4 98.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 307 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 113 O REMARK 620 2 ASP B 116 OD1 97.3 REMARK 620 3 HOH B 404 O 70.3 56.6 REMARK 620 4 HOH B 457 O 57.9 128.9 72.5 REMARK 620 5 HOH B 564 O 161.8 89.5 126.8 128.6 REMARK 620 6 HOH B 566 O 82.4 75.2 119.0 133.4 83.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GVX A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GVX B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MPD B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 307 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5JCU RELATED DB: PDB DBREF 5JCW A 0 209 UNP P09211 GSTP1_HUMAN 1 210 DBREF 5JCW B 0 209 UNP P09211 GSTP1_HUMAN 1 210 SEQRES 1 A 210 MET PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY SEQRES 2 A 210 ARG CYS ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY SEQRES 3 A 210 GLN SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP SEQRES 4 A 210 GLN GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN SEQRES 5 A 210 LEU PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SEQRES 6 A 210 SER ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY SEQRES 7 A 210 LEU TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP SEQRES 8 A 210 MET VAL ASN ASP GLY VAL GLU ASP LEU ARG CYS LYS TYR SEQRES 9 A 210 ILE SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP SEQRES 10 A 210 ASP TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE SEQRES 11 A 210 GLU THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE SEQRES 12 A 210 ILE VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU SEQRES 13 A 210 LEU ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY SEQRES 14 A 210 CYS LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY SEQRES 15 A 210 ARG LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SEQRES 16 A 210 SER PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY SEQRES 17 A 210 LYS GLN SEQRES 1 B 210 MET PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY SEQRES 2 B 210 ARG CYS ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY SEQRES 3 B 210 GLN SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP SEQRES 4 B 210 GLN GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN SEQRES 5 B 210 LEU PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SEQRES 6 B 210 SER ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY SEQRES 7 B 210 LEU TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP SEQRES 8 B 210 MET VAL ASN ASP GLY VAL GLU ASP LEU ARG CYS LYS TYR SEQRES 9 B 210 ILE SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP SEQRES 10 B 210 ASP TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE SEQRES 11 B 210 GLU THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE SEQRES 12 B 210 ILE VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU SEQRES 13 B 210 LEU ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY SEQRES 14 B 210 CYS LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY SEQRES 15 B 210 ARG LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SEQRES 16 B 210 SER PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY SEQRES 17 B 210 LYS GLN HET GVX A 301 31 HET MPD A 302 8 HET ACT A 303 7 HET CA A 304 1 HET CA A 305 1 HET CA A 306 1 HET CA A 307 1 HET GSH A 308 35 HET GVX B 301 31 HET MPD B 302 8 HET ACT B 303 7 HET CA B 304 1 HET CA B 305 1 HET CA B 306 1 HET CA B 307 1 HETNAM GVX L-GAMMA-GLUTAMYL-S-[(2-PHENYLETHYL)CARBAMOTHIOYL]-L- HETNAM 2 GVX CYSTEINYLGLYCINE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM ACT ACETATE ION HETNAM CA CALCIUM ION HETNAM GSH GLUTATHIONE FORMUL 3 GVX 2(C19 H26 N4 O6 S2) FORMUL 4 MPD 2(C6 H14 O2) FORMUL 5 ACT 2(C2 H3 O2 1-) FORMUL 6 CA 8(CA 2+) FORMUL 10 GSH C10 H17 N3 O6 S FORMUL 18 HOH *479(H2 O) HELIX 1 AA1 ARG A 11 ARG A 13 5 3 HELIX 2 AA2 CYS A 14 GLN A 24 1 11 HELIX 3 AA3 THR A 34 GLY A 41 1 8 HELIX 4 AA4 GLY A 41 CYS A 47 1 7 HELIX 5 AA5 GLN A 64 LEU A 76 1 13 HELIX 6 AA6 ASP A 82 ASN A 110 1 29 HELIX 7 AA7 ASN A 110 GLN A 135 1 26 HELIX 8 AA8 ASN A 136 LYS A 140 5 5 HELIX 9 AA9 SER A 149 ALA A 166 1 18 HELIX 10 AB1 PHE A 173 ALA A 185 1 13 HELIX 11 AB2 ARG A 186 ALA A 194 1 9 HELIX 12 AB3 SER A 195 ASN A 200 1 6 HELIX 13 AB4 ARG B 11 ARG B 13 5 3 HELIX 14 AB5 CYS B 14 GLN B 24 1 11 HELIX 15 AB6 THR B 34 GLY B 41 1 8 HELIX 16 AB7 GLY B 41 CYS B 47 1 7 HELIX 17 AB8 GLN B 64 GLY B 77 1 14 HELIX 18 AB9 ASP B 82 ASN B 110 1 29 HELIX 19 AC1 ASN B 110 GLN B 135 1 26 HELIX 20 AC2 ASN B 136 LYS B 140 5 5 HELIX 21 AC3 SER B 149 ALA B 166 1 18 HELIX 22 AC4 PHE B 173 ALA B 185 1 13 HELIX 23 AC5 ARG B 186 SER B 195 1 10 HELIX 24 AC6 SER B 195 ASN B 200 1 6 SHEET 1 AA1 4 TRP A 28 VAL A 32 0 SHEET 2 AA1 4 TYR A 3 TYR A 7 1 N VAL A 5 O GLU A 31 SHEET 3 AA1 4 LYS A 54 ASP A 57 -1 O LYS A 54 N VAL A 6 SHEET 4 AA1 4 LEU A 60 TYR A 63 -1 O LEU A 62 N PHE A 55 SHEET 1 AA2 4 TRP B 28 VAL B 32 0 SHEET 2 AA2 4 TYR B 3 TYR B 7 1 N VAL B 5 O GLU B 31 SHEET 3 AA2 4 LYS B 54 ASP B 57 -1 O LYS B 54 N VAL B 6 SHEET 4 AA2 4 LEU B 60 TYR B 63 -1 O LEU B 62 N PHE B 55 LINK O TRP A 28 CA CA A 304 1555 1555 2.38 LINK O GLU A 30 CA CA B 306 1555 4545 2.33 LINK O GLY A 77 CA CA A 305 1555 1555 2.44 LINK O ALA A 113 CA CA A 307 1555 1555 2.58 LINK OD1 ASP A 116 CA CA A 307 1555 1555 2.26 LINK OE1 GLN A 147 CA CA A 305 1555 1555 2.46 LINK OD1 ASP A 171 CA CA A 306 1555 1555 2.26 LINK OD2 ASP A 171 CA CA B 304 1555 4546 2.41 LINK CA CA A 304 O HOH A 458 1555 1555 2.44 LINK CA CA A 304 O HOH A 538 1555 1555 2.75 LINK CA CA A 304 O HOH A 546 1555 1555 2.40 LINK CA CA A 304 O HOH A 564 1555 1555 2.40 LINK CA CA A 304 O HOH A 592 1555 1555 2.84 LINK CA CA A 304 OD2 ASP B 171 4555 1555 2.31 LINK CA CA A 304 O HOH B 591 1555 4545 2.47 LINK CA CA A 305 O HOH A 470 1555 1555 2.46 LINK CA CA A 305 O HOH A 531 1555 1555 2.61 LINK CA CA A 305 O HOH A 549 1555 1555 2.50 LINK CA CA A 305 O HOH A 556 1555 1555 2.53 LINK CA CA A 305 O HOH A 575 1555 1555 2.31 LINK CA CA A 306 O HOH A 401 1555 1555 2.40 LINK CA CA A 306 O HOH A 479 1555 1555 2.57 LINK CA CA A 306 O HOH A 573 1555 1555 2.43 LINK CA CA A 306 O GLU B 30 4556 1555 2.46 LINK CA CA A 306 O HOH B 513 1555 4546 2.29 LINK CA CA A 306 O HOH B 582 1555 4546 2.38 LINK CA CA A 307 O HOH A 405 1555 1555 2.36 LINK CA CA A 307 O HOH A 553 1555 2656 2.50 LINK O HOH A 570 CA CA B 306 4555 1555 2.33 LINK O HOH A 576 CA CA B 306 4555 1555 2.42 LINK O TRP B 28 CA CA B 304 1555 1555 2.62 LINK O GLY B 77 CA CA B 305 1555 1555 2.43 LINK O ALA B 113 CA CA B 307 1555 1555 2.55 LINK OD1 ASP B 116 CA CA B 307 1555 1555 2.59 LINK OE1 GLN B 147 CA CA B 305 1555 1555 2.47 LINK OD1 ASP B 171 CA CA B 306 1555 1555 2.27 LINK CA CA B 304 O HOH B 477 1555 1555 2.42 LINK CA CA B 304 O HOH B 560 1555 1555 2.46 LINK CA CA B 304 O HOH B 567 1555 1555 2.64 LINK CA CA B 304 O HOH B 572 1555 1555 2.32 LINK CA CA B 304 O HOH B 585 1555 1555 2.75 LINK CA CA B 305 O HOH B 489 1555 1555 2.58 LINK CA CA B 305 O HOH B 523 1555 1555 2.31 LINK CA CA B 305 O HOH B 528 1555 1555 2.42 LINK CA CA B 305 O HOH B 539 1555 1555 2.41 LINK CA CA B 305 O HOH B 587 1555 1555 2.58 LINK CA CA B 306 O HOH B 512 1555 1555 2.41 LINK CA CA B 306 O HOH B 546 1555 1555 2.43 LINK CA CA B 306 O HOH B 568 1555 1555 2.89 LINK CA CA B 307 O HOH B 404 1555 1555 2.38 LINK CA CA B 307 O HOH B 457 1555 1555 2.98 LINK CA CA B 307 O HOH B 564 1555 1555 2.32 LINK CA CA B 307 O HOH B 566 1555 1555 2.51 CISPEP 1 LEU A 52 PRO A 53 0 5.46 CISPEP 2 LEU B 52 PRO B 53 0 5.37 SITE 1 AC1 18 TYR A 7 PHE A 8 ARG A 13 TRP A 38 SITE 2 AC1 18 LYS A 44 GLN A 51 LEU A 52 PRO A 53 SITE 3 AC1 18 GLN A 64 SER A 65 ILE A 104 TYR A 108 SITE 4 AC1 18 MPD A 302 HOH A 431 HOH A 477 HOH A 483 SITE 5 AC1 18 HOH A 491 ASP B 98 SITE 1 AC2 2 PHE A 8 GVX A 301 SITE 1 AC3 4 GLN A 147 ILE A 148 ARG A 186 HOH A 478 SITE 1 AC4 8 TRP A 28 HOH A 458 HOH A 538 HOH A 546 SITE 2 AC4 8 HOH A 564 HOH A 592 ASP B 171 HOH B 591 SITE 1 AC5 7 GLY A 77 GLN A 147 HOH A 470 HOH A 531 SITE 2 AC5 7 HOH A 549 HOH A 556 HOH A 575 SITE 1 AC6 7 ASP A 171 HOH A 401 HOH A 479 HOH A 573 SITE 2 AC6 7 GLU B 30 HOH B 513 HOH B 582 SITE 1 AC7 5 ALA A 113 ASP A 116 ASP A 117 HOH A 405 SITE 2 AC7 5 HOH A 553 SITE 1 AC8 8 ARG A 74 TYR A 79 GLY A 80 ASP A 82 SITE 2 AC8 8 GLN A 83 ARG B 74 TYR B 79 ALA B 86 SITE 1 AC9 18 ASP A 98 TYR B 7 PHE B 8 ARG B 13 SITE 2 AC9 18 TRP B 38 LYS B 44 GLN B 51 LEU B 52 SITE 3 AC9 18 GLN B 64 SER B 65 TYR B 108 MPD B 302 SITE 4 AC9 18 HOH B 412 HOH B 431 HOH B 498 HOH B 503 SITE 5 AC9 18 HOH B 504 HOH B 557 SITE 1 AD1 3 PHE B 8 TYR B 108 GVX B 301 SITE 1 AD2 5 PHE B 142 GLN B 147 ILE B 148 ARG B 186 SITE 2 AD2 5 HOH B 500 SITE 1 AD3 7 ASP A 171 TRP B 28 HOH B 477 HOH B 560 SITE 2 AD3 7 HOH B 567 HOH B 572 HOH B 585 SITE 1 AD4 7 GLY B 77 GLN B 147 HOH B 489 HOH B 523 SITE 2 AD4 7 HOH B 528 HOH B 539 HOH B 587 SITE 1 AD5 7 GLU A 30 HOH A 570 HOH A 576 ASP B 171 SITE 2 AD5 7 HOH B 512 HOH B 546 HOH B 568 SITE 1 AD6 6 ALA B 113 ASP B 116 HOH B 404 HOH B 457 SITE 2 AD6 6 HOH B 564 HOH B 566 CRYST1 78.365 88.943 69.483 90.00 97.85 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012761 0.000000 0.001760 0.00000 SCALE2 0.000000 0.011243 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014528 0.00000