HEADER TRANSCRIPTION 20-APR-16 5JGC TITLE CRYSTAL STRUCTURE OF THE RICE TOPLESS RELATED PROTEIN 2 (TPR2) N- TITLE 2 TERMINAL TOPLESS DOMAIN (1-209) L111A, L130A, L179A AND I195A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN TPR1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL TOPLESS DOMAIN (UNP RESIDUES 1-209); COMPND 5 SYNONYM: ABERRANT SPIKELET AND PANICLE1-RELATED 2,PROTEIN ASP1- COMPND 6 RELATED 2,OSASPR2,TOPLESS-RELATED PROTEIN 1,TOPLESS-RELATED PROTEIN COMPND 7 2,OSTPR2; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYZA SATIVA; SOURCE 3 ORGANISM_COMMON: RICE; SOURCE 4 ORGANISM_TAXID: 4530; SOURCE 5 GENE: TPR1, ASPR2, TPR2, OS01G0254100, LOC_OS01G15020, OSJ_01134, SOURCE 6 OSNPB_010254100, P0705D01.10-1; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TRANSCRIPTION REPRESSION, TRANSCRIPTIONAL COREPRESSOR TOPLESS, ALPHA- KEYWDS 2 HELICAL STRUCTURE, TETRAMER, TRANSCRIPTIONAL REPRESSOR D53, KEYWDS 3 TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR J.KE,H.MA,X.GU,J.S.BRUNZELLE,H.E.XU,K.MELCHER REVDAT 4 06-MAR-24 5JGC 1 REMARK REVDAT 3 25-DEC-19 5JGC 1 REMARK REVDAT 2 27-SEP-17 5JGC 1 REMARK REVDAT 1 05-JUL-17 5JGC 0 JRNL AUTH H.MA,J.DUAN,J.KE,Y.HE,X.GU,T.H.XU,H.YU,Y.WANG,J.S.BRUNZELLE, JRNL AUTH 2 Y.JIANG,S.B.ROTHBART,H.E.XU,J.LI,K.MELCHER JRNL TITL A D53 REPRESSION MOTIF INDUCES OLIGOMERIZATION OF TOPLESS JRNL TITL 2 COREPRESSORS AND PROMOTES ASSEMBLY OF A JRNL TITL 3 COREPRESSOR-NUCLEOSOME COMPLEX. JRNL REF SCI ADV V. 3 01217 2017 JRNL REFN ESSN 2375-2548 JRNL PMID 28630893 JRNL DOI 10.1126/SCIADV.1601217 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.KE,H.MA,X.GU,A.THELEN,J.S.BRUNZELLE,J.LI,H.E.XU,K.MELCHER REMARK 1 TITL STRUCTURAL BASIS FOR RECOGNITION OF DIVERSE TRANSCRIPTIONAL REMARK 1 TITL 2 REPRESSORS BY THE TOPLESS FAMILY OF COREPRESSORS. REMARK 1 REF SCI ADV V. 1 00107 2015 REMARK 1 REFN ESSN 2375-2548 REMARK 1 PMID 26601214 REMARK 1 DOI 10.1126/SCIADV.1500107 REMARK 2 REMARK 2 RESOLUTION. 2.08 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.08 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 18499 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760 REMARK 3 FREE R VALUE TEST SET COUNT : 1601 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.3217 - 4.6193 0.99 2916 139 0.1755 0.1990 REMARK 3 2 4.6193 - 3.6693 1.00 2905 151 0.1625 0.2074 REMARK 3 3 3.6693 - 3.2063 1.00 2949 107 0.2204 0.2600 REMARK 3 4 3.2063 - 2.9135 1.00 2924 144 0.2384 0.2542 REMARK 3 5 2.9135 - 2.7049 1.00 2907 156 0.2519 0.3358 REMARK 3 6 2.7049 - 2.5455 1.00 2945 128 0.2467 0.2891 REMARK 3 7 2.5455 - 2.4181 1.00 2876 180 0.2442 0.2930 REMARK 3 8 2.4181 - 2.3129 1.00 2919 150 0.2509 0.2867 REMARK 3 9 2.3129 - 2.2239 1.00 2899 141 0.2475 0.2263 REMARK 3 10 2.2239 - 2.1472 1.00 2901 166 0.2603 0.2944 REMARK 3 11 2.1472 - 2.0801 1.00 2916 139 0.3029 0.3244 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1670 REMARK 3 ANGLE : 0.815 2243 REMARK 3 CHIRALITY : 0.033 249 REMARK 3 PLANARITY : 0.003 284 REMARK 3 DIHEDRAL : 14.630 628 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JGC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220543. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NI FILTER REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18565 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.080 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.08 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 0.92000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% W/V POLYETHYLENE GLYCOL 4000, 0.2 REMARK 280 M MAGNESIUM CHLORIDE HEXAHYDRATE, 0.1 M TRIS HYDROCHLORIDE PH REMARK 280 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 42 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.75800 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.75800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.46850 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.75800 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.75800 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 87.46850 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.75800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.75800 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 87.46850 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.75800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.75800 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 87.46850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -217.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 57.51600 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -57.51600 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 57.51600 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 -57.51600 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A 190 REMARK 465 PRO A 191 REMARK 465 ASN A 192 REMARK 465 PRO A 193 REMARK 465 ASP A 194 REMARK 465 ALA A 195 REMARK 465 PRO A 206 REMARK 465 PRO A 207 REMARK 465 ASN A 208 REMARK 465 GLY A 209 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PHE A 107 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLN A 129 CG CD OE1 NE2 REMARK 470 LYS A 132 CG CD CE NZ REMARK 470 LYS A 187 CG CD CE NZ REMARK 470 ASN A 188 CG OD1 ND2 REMARK 470 LYS A 196 CG CD CE NZ REMARK 470 HIS A 202 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 528 O HOH A 567 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 187 CB - CA - C ANGL. DEV. = 39.5 DEGREES REMARK 500 LYS A 187 N - CA - C ANGL. DEV. = -26.7 DEGREES REMARK 500 ASN A 188 N - CA - CB ANGL. DEV. = 22.5 DEGREES REMARK 500 ASN A 188 N - CA - C ANGL. DEV. = -34.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 89 75.66 -103.10 REMARK 500 PHE A 124 0.47 -68.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 183 ND1 REMARK 620 2 CYS A 186 SG 118.0 REMARK 620 3 CYS A 204 SG 152.9 87.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5J9K RELATED DB: PDB REMARK 900 RELATED ID: 5JA5 RELATED DB: PDB REMARK 900 RELATED ID: 5JHP RELATED DB: PDB DBREF 5JGC A 1 209 UNP Q5NBT9 TPR1_ORYSJ 1 209 SEQADV 5JGC ALA A 111 UNP Q5NBT9 LEU 111 ENGINEERED MUTATION SEQADV 5JGC ALA A 130 UNP Q5NBT9 LEU 130 ENGINEERED MUTATION SEQADV 5JGC ALA A 179 UNP Q5NBT9 LEU 179 ENGINEERED MUTATION SEQADV 5JGC ALA A 195 UNP Q5NBT9 ILE 195 ENGINEERED MUTATION SEQRES 1 A 209 MET SER SER LEU SER ARG GLU LEU VAL PHE LEU ILE LEU SEQRES 2 A 209 GLN PHE LEU ASP GLU GLU LYS PHE LYS GLU THR VAL HIS SEQRES 3 A 209 LYS LEU GLU GLN GLU SER GLY PHE PHE PHE ASN MET LYS SEQRES 4 A 209 TYR PHE GLU GLU LYS VAL HIS ALA GLY GLU TRP ASP GLU SEQRES 5 A 209 VAL GLU LYS TYR LEU SER GLY PHE THR LYS VAL ASP ASP SEQRES 6 A 209 ASN ARG TYR SER MET LYS ILE PHE PHE GLU ILE ARG LYS SEQRES 7 A 209 GLN LYS TYR LEU GLU ALA LEU ASP ARG HIS ASP ARG ALA SEQRES 8 A 209 LYS ALA VAL ASP ILE LEU VAL LYS ASP LEU LYS VAL PHE SEQRES 9 A 209 SER THR PHE ASN GLU GLU ALA TYR LYS GLU ILE THR GLN SEQRES 10 A 209 LEU LEU THR LEU GLU ASN PHE ARG GLU ASN GLU GLN ALA SEQRES 11 A 209 SER LYS TYR GLY ASP THR LYS SER ALA ARG SER ILE MET SEQRES 12 A 209 LEU ILE GLU LEU LYS LYS LEU ILE GLU ALA ASN PRO LEU SEQRES 13 A 209 PHE ARG GLU LYS LEU VAL PHE PRO THR LEU LYS ALA SER SEQRES 14 A 209 ARG LEU ARG THR LEU ILE ASN GLN SER ALA ASN TRP GLN SEQRES 15 A 209 HIS GLN LEU CYS LYS ASN PRO ARG PRO ASN PRO ASP ALA SEQRES 16 A 209 LYS THR LEU PHE THR ASP HIS THR CYS THR PRO PRO ASN SEQRES 17 A 209 GLY HET ZN A 401 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ FORMUL 3 HOH *70(H2 O) HELIX 1 AA1 SER A 2 GLU A 19 1 18 HELIX 2 AA2 PHE A 21 GLY A 33 1 13 HELIX 3 AA3 ASN A 37 ALA A 47 1 11 HELIX 4 AA4 GLU A 49 SER A 58 1 10 HELIX 5 AA5 ASN A 66 ARG A 87 1 22 HELIX 6 AA6 ASP A 89 ASP A 100 1 12 HELIX 7 AA7 LEU A 101 SER A 105 5 5 HELIX 8 AA8 ASN A 108 GLN A 117 1 10 HELIX 9 AA9 LEU A 118 LEU A 121 5 4 HELIX 10 AB1 ASN A 123 SER A 131 5 9 HELIX 11 AB2 ASP A 135 ASN A 154 1 20 HELIX 12 AB3 PRO A 155 ARG A 158 5 4 HELIX 13 AB4 SER A 169 GLN A 184 1 16 LINK ND1 HIS A 183 ZN ZN A 401 1555 1555 2.35 LINK SG CYS A 186 ZN ZN A 401 1555 1555 2.91 LINK SG CYS A 204 ZN ZN A 401 1555 1555 2.14 CISPEP 1 LYS A 187 ASN A 188 0 3.39 SITE 1 AC1 3 HIS A 183 CYS A 186 CYS A 204 CRYST1 57.516 57.516 174.937 90.00 90.00 90.00 P 42 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017386 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017386 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005716 0.00000