HEADER OXIDOREDUCTASE 26-APR-16 5JKV TITLE HUMAN PLACENTAL AROMATASE CYTOCHROME P450 (CYP19A1) AT 2.75 ANGSTROM TITLE 2 WITH BOUND POLYETHYLENE GLYCOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: AROMATASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CYPXIX,CYTOCHROME P-450AROM,CYTOCHROME P450 19A1,ESTROGEN COMPND 5 SYNTHASE; COMPND 6 EC: 1.14.14.14 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606 KEYWDS AROMATASE, CYTOCHROME P450, HUMAN PLACENTA, ESTROGEN SYNTHASE, KEYWDS 2 OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR D.GHOSH,J.LO,C.EGBUTA REVDAT 5 06-MAR-24 5JKV 1 REMARK REVDAT 4 25-DEC-19 5JKV 1 REMARK REVDAT 3 30-MAY-18 5JKV 1 JRNL REVDAT 2 27-SEP-17 5JKV 1 REMARK REVDAT 1 26-APR-17 5JKV 0 JRNL AUTH D.GHOSH,C.EGBUTA,J.LO JRNL TITL TESTOSTERONE COMPLEX AND NON-STEROIDAL LIGANDS OF HUMAN JRNL TITL 2 AROMATASE. JRNL REF J. STEROID BIOCHEM. MOL. 2018 JRNL REF 2 BIOL. JRNL REFN ISSN 1879-1220 JRNL PMID 29476820 JRNL DOI 10.1016/J.JSBMB.2018.02.009 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 121.43 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 33634 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1753 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2428 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.3460 REMARK 3 BIN FREE R VALUE SET COUNT : 144 REMARK 3 BIN FREE R VALUE : 0.3890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3658 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 43 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 83.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.62 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.273 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.222 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.181 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.629 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3855 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5212 ; 1.417 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 453 ; 5.727 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 166 ;36.571 ;23.554 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 712 ;19.248 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;12.802 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 567 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2824 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1812 ; 2.146 ; 7.026 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2265 ; 3.603 ;10.537 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2043 ; 2.542 ; 7.232 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5851 ; 7.329 ;58.528 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JKV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-APR-16. REMARK 100 THE DEPOSITION ID IS D_1000220796. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 1.0 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 1.0 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33634 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 121.430 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 78.94 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20-30% PEG 4000, PHOSPHATE BUFFER, PH REMARK 280 7.4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 79.51400 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 39.75700 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 39.75700 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 79.51400 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 VAL A 2 REMARK 465 LEU A 3 REMARK 465 GLU A 4 REMARK 465 MET A 5 REMARK 465 LEU A 6 REMARK 465 ASN A 7 REMARK 465 PRO A 8 REMARK 465 ILE A 9 REMARK 465 HIS A 10 REMARK 465 TYR A 11 REMARK 465 ASN A 12 REMARK 465 ILE A 13 REMARK 465 THR A 14 REMARK 465 SER A 15 REMARK 465 ILE A 16 REMARK 465 VAL A 17 REMARK 465 PRO A 18 REMARK 465 GLU A 19 REMARK 465 ALA A 20 REMARK 465 MET A 21 REMARK 465 PRO A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 24 REMARK 465 THR A 25 REMARK 465 MET A 26 REMARK 465 PRO A 27 REMARK 465 VAL A 28 REMARK 465 LEU A 29 REMARK 465 LEU A 30 REMARK 465 LEU A 31 REMARK 465 THR A 32 REMARK 465 GLY A 33 REMARK 465 LEU A 34 REMARK 465 PHE A 35 REMARK 465 LEU A 36 REMARK 465 LEU A 37 REMARK 465 VAL A 38 REMARK 465 TRP A 39 REMARK 465 ASN A 40 REMARK 465 TYR A 41 REMARK 465 GLU A 42 REMARK 465 GLY A 43 REMARK 465 THR A 44 REMARK 465 SER A 497 REMARK 465 ASP A 498 REMARK 465 ARG A 499 REMARK 465 CYS A 500 REMARK 465 LEU A 501 REMARK 465 GLU A 502 REMARK 465 HIS A 503 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 301 CA - CB - CG ANGL. DEV. = 17.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 90 -133.97 50.86 REMARK 500 ARG A 115 -162.69 -111.99 REMARK 500 LYS A 130 -36.95 -135.83 REMARK 500 VAL A 178 -7.23 -141.82 REMARK 500 LEU A 204 -45.33 -130.20 REMARK 500 TRP A 239 26.17 -79.00 REMARK 500 THR A 268 52.69 -115.30 REMARK 500 LYS A 271 69.80 -100.17 REMARK 500 GLN A 367 79.77 -118.89 REMARK 500 ASP A 384 -84.56 55.06 REMARK 500 ASN A 421 115.97 -38.59 REMARK 500 GLN A 464 -138.91 55.31 REMARK 500 ASP A 476 -104.77 -116.05 REMARK 500 ASN A 486 -163.15 -110.92 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 601 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 437 SG REMARK 620 2 HEM A 601 NA 92.7 REMARK 620 3 HEM A 601 NB 85.6 88.5 REMARK 620 4 HEM A 601 NC 90.3 177.0 92.0 REMARK 620 5 HEM A 601 ND 95.9 91.3 178.5 88.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HEM A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ASD A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 607 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EQM RELATED DB: PDB REMARK 900 RELATED ID: 3S79 RELATED DB: PDB REMARK 900 RELATED ID: 5JKW RELATED DB: PDB REMARK 900 RELATED ID: 5JL6 RELATED DB: PDB REMARK 900 RELATED ID: 5JL7 RELATED DB: PDB REMARK 900 RELATED ID: 5JL9 RELATED DB: PDB DBREF 5JKV A 1 503 UNP P11511 CP19A_HUMAN 1 503 SEQRES 1 A 503 MET VAL LEU GLU MET LEU ASN PRO ILE HIS TYR ASN ILE SEQRES 2 A 503 THR SER ILE VAL PRO GLU ALA MET PRO ALA ALA THR MET SEQRES 3 A 503 PRO VAL LEU LEU LEU THR GLY LEU PHE LEU LEU VAL TRP SEQRES 4 A 503 ASN TYR GLU GLY THR SER SER ILE PRO GLY PRO GLY TYR SEQRES 5 A 503 CYS MET GLY ILE GLY PRO LEU ILE SER HIS GLY ARG PHE SEQRES 6 A 503 LEU TRP MET GLY ILE GLY SER ALA CYS ASN TYR TYR ASN SEQRES 7 A 503 ARG VAL TYR GLY GLU PHE MET ARG VAL TRP ILE SER GLY SEQRES 8 A 503 GLU GLU THR LEU ILE ILE SER LYS SER SER SER MET PHE SEQRES 9 A 503 HIS ILE MET LYS HIS ASN HIS TYR SER SER ARG PHE GLY SEQRES 10 A 503 SER LYS LEU GLY LEU GLN CYS ILE GLY MET HIS GLU LYS SEQRES 11 A 503 GLY ILE ILE PHE ASN ASN ASN PRO GLU LEU TRP LYS THR SEQRES 12 A 503 THR ARG PRO PHE PHE MET LYS ALA LEU SER GLY PRO GLY SEQRES 13 A 503 LEU VAL ARG MET VAL THR VAL CYS ALA GLU SER LEU LYS SEQRES 14 A 503 THR HIS LEU ASP ARG LEU GLU GLU VAL THR ASN GLU SER SEQRES 15 A 503 GLY TYR VAL ASP VAL LEU THR LEU LEU ARG ARG VAL MET SEQRES 16 A 503 LEU ASP THR SER ASN THR LEU PHE LEU ARG ILE PRO LEU SEQRES 17 A 503 ASP GLU SER ALA ILE VAL VAL LYS ILE GLN GLY TYR PHE SEQRES 18 A 503 ASP ALA TRP GLN ALA LEU LEU ILE LYS PRO ASP ILE PHE SEQRES 19 A 503 PHE LYS ILE SER TRP LEU TYR LYS LYS TYR GLU LYS SER SEQRES 20 A 503 VAL LYS ASP LEU LYS ASP ALA ILE GLU VAL LEU ILE ALA SEQRES 21 A 503 GLU LYS ARG ARG ARG ILE SER THR GLU GLU LYS LEU GLU SEQRES 22 A 503 GLU CYS MET ASP PHE ALA THR GLU LEU ILE LEU ALA GLU SEQRES 23 A 503 LYS ARG GLY ASP LEU THR ARG GLU ASN VAL ASN GLN CYS SEQRES 24 A 503 ILE LEU GLU MET LEU ILE ALA ALA PRO ASP THR MET SER SEQRES 25 A 503 VAL SER LEU PHE PHE MET LEU PHE LEU ILE ALA LYS HIS SEQRES 26 A 503 PRO ASN VAL GLU GLU ALA ILE ILE LYS GLU ILE GLN THR SEQRES 27 A 503 VAL ILE GLY GLU ARG ASP ILE LYS ILE ASP ASP ILE GLN SEQRES 28 A 503 LYS LEU LYS VAL MET GLU ASN PHE ILE TYR GLU SER MET SEQRES 29 A 503 ARG TYR GLN PRO VAL VAL ASP LEU VAL MET ARG LYS ALA SEQRES 30 A 503 LEU GLU ASP ASP VAL ILE ASP GLY TYR PRO VAL LYS LYS SEQRES 31 A 503 GLY THR ASN ILE ILE LEU ASN ILE GLY ARG MET HIS ARG SEQRES 32 A 503 LEU GLU PHE PHE PRO LYS PRO ASN GLU PHE THR LEU GLU SEQRES 33 A 503 ASN PHE ALA LYS ASN VAL PRO TYR ARG TYR PHE GLN PRO SEQRES 34 A 503 PHE GLY PHE GLY PRO ARG GLY CYS ALA GLY LYS TYR ILE SEQRES 35 A 503 ALA MET VAL MET MET LYS ALA ILE LEU VAL THR LEU LEU SEQRES 36 A 503 ARG ARG PHE HIS VAL LYS THR LEU GLN GLY GLN CYS VAL SEQRES 37 A 503 GLU SER ILE GLN LYS ILE HIS ASP LEU SER LEU HIS PRO SEQRES 38 A 503 ASP GLU THR LYS ASN MET LEU GLU MET ILE PHE THR PRO SEQRES 39 A 503 ARG ASN SER ASP ARG CYS LEU GLU HIS HET HEM A 601 43 HET ASD A 602 21 HET 1PE A 603 16 HET PO4 A 604 5 HET PO4 A 605 5 HET PO4 A 606 5 HET PO4 A 607 5 HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETNAM ASD 4-ANDROSTENE-3-17-DIONE HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM PO4 PHOSPHATE ION HETSYN HEM HEME HETSYN 1PE PEG400 FORMUL 2 HEM C34 H32 FE N4 O4 FORMUL 3 ASD C19 H26 O2 FORMUL 4 1PE C10 H22 O6 FORMUL 5 PO4 4(O4 P 3-) FORMUL 9 HOH *43(H2 O) HELIX 1 AA1 ILE A 56 GLY A 69 1 14 HELIX 2 AA2 GLY A 69 TYR A 81 1 13 HELIX 3 AA3 LYS A 99 HIS A 109 1 11 HELIX 4 AA4 ASN A 110 SER A 113 5 4 HELIX 5 AA5 SER A 118 ILE A 125 1 8 HELIX 6 AA6 ASN A 137 LEU A 152 1 16 HELIX 7 AA7 GLY A 154 ASP A 173 1 20 HELIX 8 AA8 ARG A 174 VAL A 178 5 5 HELIX 9 AA9 ASP A 186 LEU A 204 1 19 HELIX 10 AB1 ASP A 209 LEU A 228 1 20 HELIX 11 AB2 PRO A 231 LYS A 236 5 6 HELIX 12 AB3 ILE A 237 LEU A 240 5 4 HELIX 13 AB4 TYR A 241 THR A 268 1 28 HELIX 14 AB5 ASP A 277 ARG A 288 1 12 HELIX 15 AB6 THR A 292 HIS A 325 1 34 HELIX 16 AB7 HIS A 325 ILE A 340 1 16 HELIX 17 AB8 LYS A 346 ILE A 350 5 5 HELIX 18 AB9 LEU A 353 GLN A 367 1 15 HELIX 19 AC1 ASN A 397 HIS A 402 1 6 HELIX 20 AC2 THR A 414 ALA A 419 5 6 HELIX 21 AC3 GLY A 439 ARG A 456 1 18 SHEET 1 AA1 4 PHE A 84 TRP A 88 0 SHEET 2 AA1 4 GLU A 93 ILE A 97 -1 O THR A 94 N VAL A 87 SHEET 3 AA1 4 ASN A 393 LEU A 396 1 O ASN A 393 N LEU A 95 SHEET 4 AA1 4 VAL A 373 LYS A 376 -1 N ARG A 375 O ILE A 394 SHEET 1 AA2 2 ASP A 381 ILE A 383 0 SHEET 2 AA2 2 TYR A 386 VAL A 388 -1 O VAL A 388 N ASP A 381 SHEET 1 AA3 2 PHE A 458 THR A 462 0 SHEET 2 AA3 2 MET A 490 PRO A 494 -1 O THR A 493 N HIS A 459 SHEET 1 AA4 2 LYS A 473 HIS A 475 0 SHEET 2 AA4 2 LEU A 479 PRO A 481 -1 O HIS A 480 N ILE A 474 LINK SG CYS A 437 FE HEM A 601 1555 1555 2.23 SITE 1 AC1 19 MET A 107 ARG A 115 ILE A 132 ILE A 133 SITE 2 AC1 19 TRP A 141 ARG A 145 ALA A 306 SER A 314 SITE 3 AC1 19 MET A 364 VAL A 373 ARG A 375 PHE A 430 SITE 4 AC1 19 GLY A 431 ARG A 435 GLY A 436 CYS A 437 SITE 5 AC1 19 MET A 446 MET A 447 ASD A 602 SITE 1 AC2 11 ARG A 115 ILE A 133 TRP A 224 ALA A 306 SITE 2 AC2 11 ASP A 309 THR A 310 VAL A 370 LEU A 372 SITE 3 AC2 11 MET A 374 LEU A 477 HEM A 601 SITE 1 AC3 10 ARG A 145 MET A 149 GLU A 181 TYR A 424 SITE 2 AC3 10 GLN A 428 PHE A 432 GLY A 433 LYS A 440 SITE 3 AC3 10 TYR A 441 PO4 A 607 SITE 1 AC4 3 SER A 72 ASN A 75 HIS A 475 SITE 1 AC5 3 HIS A 109 ASN A 110 HIS A 111 SITE 1 AC6 4 GLU A 342 ARG A 343 ASP A 344 ARG A 456 SITE 1 AC7 4 ARG A 145 GLY A 433 PRO A 434 1PE A 603 CRYST1 140.218 140.218 119.271 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007132 0.004118 0.000000 0.00000 SCALE2 0.000000 0.008235 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008384 0.00000