HEADER HYDROLASE 29-APR-16 5JMU TITLE THE CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF PEPTIDOGLYCAN N- TITLE 2 ACETYLGLUCOSAMINE DEACETYLASE FROM EUBACTERIUM RECTALE ATCC 33656 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDOGLYCAN N-ACETYLGLUCOSAMINE DEACETYLASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC DOMAIN (UNP RESIDUES 247-496); COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGATHOBACTER RECTALIS (STRAIN ATCC 33656 / DSM SOURCE 3 3377 / JCM 17463 / KCTC 5835 / VPI 0990); SOURCE 4 ORGANISM_TAXID: 515619; SOURCE 5 STRAIN: ATCC 33656 / DSM 3377 / JCM 17463 / KCTC 5835 / VPI 0990; SOURCE 6 ATCC: 33656; SOURCE 7 GENE: EUBREC_2389; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) PGROW7-K; SOURCE 11 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 12 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS PEPTIDOGLYCAN N-ACETYLGLUCOSAMINE DEACETYLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.TAN,M.GU,S.CLANCY,A.JOACHIMIAK REVDAT 3 25-DEC-19 5JMU 1 REMARK REVDAT 2 27-SEP-17 5JMU 1 REMARK REVDAT 1 29-JUN-16 5JMU 0 JRNL AUTH K.TAN,M.GU,S.CLANCY,A.JOACHIMIAK JRNL TITL THE CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF JRNL TITL 2 PEPTIDOGLYCAN N-ACETYLGLUCOSAMINE DEACETYLASE FROM JRNL TITL 3 EUBACTERIUM RECTALE ATCC 33656 (CASP TARGET) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 33794 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1694 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.4284 - 3.5211 1.00 2845 161 0.1336 0.1782 REMARK 3 2 3.5211 - 2.7953 1.00 2756 133 0.1437 0.1696 REMARK 3 3 2.7953 - 2.4420 1.00 2694 138 0.1546 0.1637 REMARK 3 4 2.4420 - 2.2188 1.00 2713 125 0.1462 0.1783 REMARK 3 5 2.2188 - 2.0598 1.00 2683 151 0.1424 0.1684 REMARK 3 6 2.0598 - 1.9384 1.00 2635 148 0.1519 0.1992 REMARK 3 7 1.9384 - 1.8413 1.00 2678 140 0.1620 0.1984 REMARK 3 8 1.8413 - 1.7612 1.00 2640 154 0.1802 0.2246 REMARK 3 9 1.7612 - 1.6934 1.00 2656 120 0.1897 0.2603 REMARK 3 10 1.6934 - 1.6349 1.00 2638 150 0.2036 0.2295 REMARK 3 11 1.6349 - 1.5838 0.99 2603 154 0.2188 0.2613 REMARK 3 12 1.5838 - 1.5385 0.96 2559 120 0.2419 0.2362 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.190 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.016 1788 REMARK 3 ANGLE : 1.482 2454 REMARK 3 CHIRALITY : 0.078 279 REMARK 3 PLANARITY : 0.009 326 REMARK 3 DIHEDRAL : 13.965 648 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 277 THROUGH 338 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9421 42.5182 19.5180 REMARK 3 T TENSOR REMARK 3 T11: 0.0962 T22: 0.1133 REMARK 3 T33: 0.0805 T12: 0.0106 REMARK 3 T13: 0.0005 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 1.2037 L22: 2.3485 REMARK 3 L33: 1.1077 L12: 0.2658 REMARK 3 L13: 0.1658 L23: 0.4451 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: -0.1741 S13: 0.0223 REMARK 3 S21: 0.0731 S22: -0.0215 S23: 0.0509 REMARK 3 S31: -0.0518 S32: -0.0496 S33: 0.0111 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 339 THROUGH 412 ) REMARK 3 ORIGIN FOR THE GROUP (A): 45.2248 52.8817 7.7370 REMARK 3 T TENSOR REMARK 3 T11: 0.1049 T22: 0.1092 REMARK 3 T33: 0.1447 T12: -0.0009 REMARK 3 T13: 0.0045 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 0.6266 L22: 1.0763 REMARK 3 L33: 2.5914 L12: 0.1512 REMARK 3 L13: 0.1502 L23: -0.7353 REMARK 3 S TENSOR REMARK 3 S11: -0.0106 S12: 0.0190 S13: 0.1179 REMARK 3 S21: 0.0248 S22: 0.0358 S23: 0.0066 REMARK 3 S31: -0.1246 S32: 0.0322 S33: -0.0207 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 413 THROUGH 459 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.4038 40.9112 11.4482 REMARK 3 T TENSOR REMARK 3 T11: 0.1128 T22: 0.1111 REMARK 3 T33: 0.1264 T12: 0.0178 REMARK 3 T13: -0.0107 T23: 0.0313 REMARK 3 L TENSOR REMARK 3 L11: 3.1267 L22: 0.7425 REMARK 3 L33: 1.8982 L12: 0.3018 REMARK 3 L13: -0.8271 L23: 0.3988 REMARK 3 S TENSOR REMARK 3 S11: 0.0679 S12: 0.0385 S13: 0.1176 REMARK 3 S21: 0.0218 S22: -0.0210 S23: 0.1450 REMARK 3 S31: -0.0104 S32: -0.2024 S33: -0.0348 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 460 THROUGH 496 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.4149 36.7481 14.0158 REMARK 3 T TENSOR REMARK 3 T11: 0.0994 T22: 0.0908 REMARK 3 T33: 0.0921 T12: -0.0207 REMARK 3 T13: -0.0135 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 1.5276 L22: 1.7627 REMARK 3 L33: 1.2020 L12: 0.0641 REMARK 3 L13: -0.0817 L23: -1.3857 REMARK 3 S TENSOR REMARK 3 S11: -0.0583 S12: -0.1027 S13: -0.0277 REMARK 3 S21: -0.0489 S22: 0.0520 S23: 0.0653 REMARK 3 S31: 0.1234 S32: -0.0694 S33: 0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JMU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000220902. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97933 REMARK 200 MONOCHROMATOR : SI 111 CRYSTAL REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33862 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 33.420 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.13100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.85000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS:HCL, 1.8M MGSO4, PH 8.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.24750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.78850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.16150 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 39.78850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.24750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.16150 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 271 REMARK 465 ASN A 272 REMARK 465 ALA A 273 REMARK 465 SER A 274 REMARK 465 VAL A 275 REMARK 465 TYR A 276 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 428 CG OD1 ND2 REMARK 470 LYS A 430 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 408 O HOH A 601 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 359 CD GLU A 359 OE1 0.072 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 298 -14.65 89.43 REMARK 500 HIS A 346 -64.87 -107.74 REMARK 500 SER A 347 141.43 -176.79 REMARK 500 ASP A 419 -133.54 -90.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 298 OD1 REMARK 620 2 HIS A 346 NE2 91.3 REMARK 620 3 HIS A 350 NE2 91.1 94.2 REMARK 620 4 HOH A 618 O 92.6 91.9 172.8 REMARK 620 5 HOH A 640 O 89.5 175.8 89.9 83.9 REMARK 620 6 HOH A 700 O 176.0 92.6 89.4 86.5 86.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 359 OE1 REMARK 620 2 HOH A 617 O 84.2 REMARK 620 3 HOH A 654 O 87.9 87.8 REMARK 620 4 HOH A 738 O 89.8 172.4 87.4 REMARK 620 5 ASN A 421 O 63.6 87.8 24.4 85.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 503 DBREF 5JMU A 274 496 UNP C4ZEZ9 C4ZEZ9_AGARV 274 496 SEQADV 5JMU SER A 271 UNP C4ZEZ9 EXPRESSION TAG SEQADV 5JMU ASN A 272 UNP C4ZEZ9 EXPRESSION TAG SEQADV 5JMU ALA A 273 UNP C4ZEZ9 EXPRESSION TAG SEQRES 1 A 226 SER ASN ALA SER VAL TYR ASP PRO ALA ALA THR ALA ASP SEQRES 2 A 226 THR VAL ASN PRO GLY ASN LYS ILE ILE TYR LEU THR PHE SEQRES 3 A 226 ASP ASP GLY PRO GLY LYS TYR THR GLN GLY LEU LEU ASP SEQRES 4 A 226 VAL LEU ASP LYS TYR ASN VAL LYS ALA THR PHE PHE VAL SEQRES 5 A 226 THR ASN THR HIS PRO ASP TYR GLN ASN MSE ILE ALA GLU SEQRES 6 A 226 GLU ALA LYS ARG GLY HIS THR VAL ALA ILE HIS SER ALA SEQRES 7 A 226 SER HIS LYS TYR ASN GLN ILE TYR THR SER GLU GLN ALA SEQRES 8 A 226 PHE PHE ASP ASP LEU GLU GLN MSE ASN SER ILE ILE LYS SEQRES 9 A 226 ALA GLN THR GLY ASN ASP ALA SER ILE ILE ARG PHE PRO SEQRES 10 A 226 GLY GLY SER SER ASN THR VAL SER LYS ASP TYR OCS PRO SEQRES 11 A 226 GLY ILE MSE THR GLN LEU VAL ASN ASP VAL THR ALA ARG SEQRES 12 A 226 GLY LEU LEU TYR CYS ASP TRP ASN VAL SER SER GLY ASP SEQRES 13 A 226 ALA ASN PRO LYS PRO ILE SER THR GLU GLN VAL VAL GLN SEQRES 14 A 226 ASN VAL ILE SER GLY VAL GLN SER HIS ASN VAL SER VAL SEQRES 15 A 226 VAL LEU GLN HIS ASP ILE LYS GLU PHE SER VAL ASN ALA SEQRES 16 A 226 VAL GLU GLN ILE ILE GLN TRP GLY GLN ALA ASN GLY TYR SEQRES 17 A 226 THR PHE LEU PRO LEU THR THR SER SER PRO MSE SER HIS SEQRES 18 A 226 HIS ARG VAL ASN ASN MODRES 5JMU MSE A 332 MET MODIFIED RESIDUE MODRES 5JMU MSE A 369 MET MODIFIED RESIDUE MODRES 5JMU OCS A 399 CYS MODIFIED RESIDUE MODRES 5JMU MSE A 403 MET MODIFIED RESIDUE MODRES 5JMU MSE A 489 MET MODIFIED RESIDUE HET MSE A 332 8 HET MSE A 369 8 HET OCS A 399 9 HET MSE A 403 8 HET MSE A 489 8 HET ACT A 501 4 HET ZN A 502 1 HET MG A 503 1 HETNAM MSE SELENOMETHIONINE HETNAM OCS CYSTEINESULFONIC ACID HETNAM ACT ACETATE ION HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 1 OCS C3 H7 N O5 S FORMUL 2 ACT C2 H3 O2 1- FORMUL 3 ZN ZN 2+ FORMUL 4 MG MG 2+ FORMUL 5 HOH *199(H2 O) HELIX 1 AA1 ASP A 277 THR A 281 5 5 HELIX 2 AA2 TYR A 303 TYR A 314 1 12 HELIX 3 AA3 HIS A 326 TYR A 329 5 4 HELIX 4 AA4 GLN A 330 ARG A 339 1 10 HELIX 5 AA5 LYS A 351 TYR A 356 1 6 HELIX 6 AA6 SER A 358 GLY A 378 1 21 HELIX 7 AA7 THR A 393 TYR A 398 5 6 HELIX 8 AA8 GLY A 401 ARG A 413 1 13 HELIX 9 AA9 SER A 433 GLN A 446 1 14 HELIX 10 AB1 LYS A 459 ASN A 464 1 6 HELIX 11 AB2 ALA A 465 ASN A 476 1 12 SHEET 1 AA1 5 THR A 342 SER A 347 0 SHEET 2 AA1 5 THR A 319 THR A 323 1 N PHE A 320 O ALA A 344 SHEET 3 AA1 5 ILE A 291 ASP A 297 1 N PHE A 296 O PHE A 321 SHEET 4 AA1 5 VAL A 450 HIS A 456 1 O SER A 451 N TYR A 293 SHEET 5 AA1 5 VAL A 422 SER A 423 1 N VAL A 422 O LEU A 454 SHEET 1 AA2 4 THR A 342 SER A 347 0 SHEET 2 AA2 4 THR A 319 THR A 323 1 N PHE A 320 O ALA A 344 SHEET 3 AA2 4 ILE A 291 ASP A 297 1 N PHE A 296 O PHE A 321 SHEET 4 AA2 4 THR A 479 PHE A 480 1 O THR A 479 N ILE A 292 SHEET 1 AA3 2 ILE A 383 ILE A 384 0 SHEET 2 AA3 2 LEU A 416 TYR A 417 1 O LEU A 416 N ILE A 384 LINK OD1 ASP A 298 ZN ZN A 502 1555 1555 2.12 LINK C ASN A 331 N MSE A 332 1555 1555 1.35 LINK C MSE A 332 N ILE A 333 1555 1555 1.33 LINK NE2 HIS A 346 ZN ZN A 502 1555 1555 2.10 LINK NE2 HIS A 350 ZN ZN A 502 1555 1555 2.17 LINK OE1 GLU A 359 MG MG A 503 1555 1555 2.24 LINK C GLN A 368 N MSE A 369 1555 1555 1.33 LINK C MSE A 369 N ASN A 370 1555 1555 1.34 LINK C TYR A 398 N OCS A 399 1555 1555 1.33 LINK C OCS A 399 N PRO A 400 1555 1555 1.33 LINK C ILE A 402 N MSE A 403 1555 1555 1.33 LINK C MSE A 403 N THR A 404 1555 1555 1.33 LINK C PRO A 488 N MSE A 489 1555 1555 1.34 LINK C MSE A 489 N SER A 490 1555 1555 1.32 LINK ZN ZN A 502 O HOH A 618 1555 1555 2.06 LINK ZN ZN A 502 O HOH A 640 1555 1555 2.11 LINK ZN ZN A 502 O HOH A 700 1555 1555 2.17 LINK MG MG A 503 O HOH A 617 1555 1555 2.11 LINK MG MG A 503 O HOH A 654 1555 1555 2.10 LINK MG MG A 503 O HOH A 738 1555 1555 2.08 LINK O ASN A 421 MG MG A 503 1555 4465 2.05 CISPEP 1 GLY A 299 PRO A 300 0 4.06 SITE 1 AC1 5 GLN A 360 HIS A 448 HOH A 611 HOH A 722 SITE 2 AC1 5 HOH A 750 SITE 1 AC2 6 ASP A 298 HIS A 346 HIS A 350 HOH A 618 SITE 2 AC2 6 HOH A 640 HOH A 700 SITE 1 AC3 6 GLU A 359 ASN A 421 HIS A 448 HOH A 617 SITE 2 AC3 6 HOH A 654 HOH A 738 CRYST1 46.495 60.323 79.577 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021508 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016577 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012566 0.00000