HEADER SIGNALING PROTEIN 13-MAY-16 5JXC TITLE SYNGAP COILED-COIL TRIMER COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS/RAP GTPASE-ACTIVATING PROTEIN SYNGAP; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: UNP RESIDUES 1171-1258; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SYNGAP1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS SYNGAP, COILED-COIL, TRIMER, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.SHANG,M.ZHANG REVDAT 2 20-MAR-24 5JXC 1 REMARK REVDAT 1 28-SEP-16 5JXC 0 JRNL AUTH M.ZENG,Y.SHANG,Y.ARAKI,T.GUO,R.L.HUGANIR,M.ZHANG JRNL TITL PHASE TRANSITION IN POSTSYNAPTIC DENSITIES UNDERLIES JRNL TITL 2 FORMATION OF SYNAPTIC COMPLEXES AND SYNAPTIC PLASTICITY. JRNL REF CELL V. 166 1163 2016 JRNL REFN ISSN 1097-4172 JRNL PMID 27565345 JRNL DOI 10.1016/J.CELL.2016.07.008 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.50 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 19058 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.227 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.307 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 973 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.5014 - 4.7802 0.98 2552 141 0.2060 0.2706 REMARK 3 2 4.7802 - 3.7952 1.00 2663 126 0.1849 0.2404 REMARK 3 3 3.7952 - 3.3157 1.00 2608 143 0.2168 0.3163 REMARK 3 4 3.3157 - 3.0127 1.00 2549 162 0.2803 0.4425 REMARK 3 5 3.0127 - 2.7968 0.99 2579 142 0.2650 0.3643 REMARK 3 6 2.7968 - 2.6319 0.99 2591 113 0.2859 0.3670 REMARK 3 7 2.6319 - 2.5002 0.97 2543 146 0.2929 0.3637 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 36.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3825 REMARK 3 ANGLE : 0.969 5122 REMARK 3 CHIRALITY : 0.047 593 REMARK 3 PLANARITY : 0.004 669 REMARK 3 DIHEDRAL : 29.076 1494 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1189 THROUGH 1274 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.3227 -43.2334 44.2376 REMARK 3 T TENSOR REMARK 3 T11: 0.6297 T22: 0.5111 REMARK 3 T33: 0.4958 T12: -0.0253 REMARK 3 T13: -0.0001 T23: 0.0619 REMARK 3 L TENSOR REMARK 3 L11: 2.4684 L22: 9.5379 REMARK 3 L33: 0.1495 L12: 4.9799 REMARK 3 L13: -0.3217 L23: -0.0607 REMARK 3 S TENSOR REMARK 3 S11: 0.1260 S12: -0.1426 S13: 0.0401 REMARK 3 S21: 0.2732 S22: -0.2466 S23: -0.0216 REMARK 3 S31: 0.1918 S32: 0.0251 S33: 0.1494 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND (RESID 1195 THROUGH 1272 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1765 -45.2205 44.4165 REMARK 3 T TENSOR REMARK 3 T11: 0.7263 T22: 0.4321 REMARK 3 T33: 0.6532 T12: -0.0567 REMARK 3 T13: -0.0734 T23: 0.0786 REMARK 3 L TENSOR REMARK 3 L11: 1.1195 L22: 4.3818 REMARK 3 L33: -0.0915 L12: 2.4167 REMARK 3 L13: 0.2180 L23: 0.5007 REMARK 3 S TENSOR REMARK 3 S11: 0.1240 S12: 0.1982 S13: -0.1715 REMARK 3 S21: 1.1309 S22: 0.2208 S23: -0.2832 REMARK 3 S31: 0.2224 S32: 0.0298 S33: -0.3650 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C AND (RESID 1194 THROUGH 1271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9952 -45.1464 37.9022 REMARK 3 T TENSOR REMARK 3 T11: 0.5648 T22: 0.4296 REMARK 3 T33: 0.7525 T12: -0.0562 REMARK 3 T13: -0.0377 T23: -0.0061 REMARK 3 L TENSOR REMARK 3 L11: 2.9322 L22: 8.6053 REMARK 3 L33: 0.1325 L12: 5.0276 REMARK 3 L13: 0.5688 L23: 0.7264 REMARK 3 S TENSOR REMARK 3 S11: -0.0583 S12: 0.1118 S13: 0.1766 REMARK 3 S21: -0.0610 S22: 0.1781 S23: 0.0814 REMARK 3 S31: 0.0759 S32: -0.0305 S33: -0.0708 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D AND (RESID 1194 THROUGH 1271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6523 36.1583 59.1523 REMARK 3 T TENSOR REMARK 3 T11: 0.6030 T22: 0.4740 REMARK 3 T33: 0.4133 T12: 0.1183 REMARK 3 T13: 0.0112 T23: 0.0231 REMARK 3 L TENSOR REMARK 3 L11: 1.5017 L22: 4.5207 REMARK 3 L33: -0.2483 L12: -2.0872 REMARK 3 L13: 0.4480 L23: -0.5310 REMARK 3 S TENSOR REMARK 3 S11: -0.4068 S12: -0.5003 S13: 0.1833 REMARK 3 S21: 0.4232 S22: 0.5842 S23: -0.2772 REMARK 3 S31: 0.1492 S32: -0.0744 S33: -0.2150 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN E AND (RESID 1189 THROUGH 1272 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.5901 37.2055 64.0582 REMARK 3 T TENSOR REMARK 3 T11: 0.5464 T22: 0.5135 REMARK 3 T33: 0.3381 T12: 0.1116 REMARK 3 T13: 0.0192 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 3.8161 L22: 3.7898 REMARK 3 L33: 0.2664 L12: -3.4657 REMARK 3 L13: 0.6589 L23: -0.4734 REMARK 3 S TENSOR REMARK 3 S11: -0.2803 S12: -0.8174 S13: 0.5401 REMARK 3 S21: -0.1634 S22: 0.6240 S23: -0.6561 REMARK 3 S31: 0.2196 S32: -0.1120 S33: -0.2124 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN F AND (RESID 1193 THROUGH 1272 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3005 32.7309 58.1822 REMARK 3 T TENSOR REMARK 3 T11: 0.5077 T22: 0.4703 REMARK 3 T33: 0.4490 T12: 0.0165 REMARK 3 T13: 0.0199 T23: 0.0042 REMARK 3 L TENSOR REMARK 3 L11: 5.1170 L22: 6.3990 REMARK 3 L33: 0.4698 L12: -5.9878 REMARK 3 L13: 1.0050 L23: -0.9474 REMARK 3 S TENSOR REMARK 3 S11: -0.0743 S12: -0.1765 S13: -0.2383 REMARK 3 S21: 0.0350 S22: 0.1721 S23: 0.4645 REMARK 3 S31: 0.1303 S32: -0.0109 S33: -0.0343 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JXC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221384. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97886 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19240 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.54 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES SODIUM PH 7.5, 0.1M L REMARK 280 -PROLINE, 20% W/V POLYETHYLENE GLYCOL 1500, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 118.33200 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15200 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1183 REMARK 465 PRO A 1184 REMARK 465 GLY A 1185 REMARK 465 SER A 1186 REMARK 465 ASP A 1187 REMARK 465 GLU A 1188 REMARK 465 GLY B 1183 REMARK 465 PRO B 1184 REMARK 465 GLY B 1185 REMARK 465 SER B 1186 REMARK 465 ASP B 1187 REMARK 465 GLU B 1188 REMARK 465 SER B 1189 REMARK 465 ARG B 1190 REMARK 465 LEU B 1191 REMARK 465 ASP B 1192 REMARK 465 ARG B 1193 REMARK 465 GLU B 1194 REMARK 465 ASP B 1273 REMARK 465 HIS B 1274 REMARK 465 GLY C 1183 REMARK 465 PRO C 1184 REMARK 465 GLY C 1185 REMARK 465 SER C 1186 REMARK 465 ASP C 1187 REMARK 465 GLU C 1188 REMARK 465 SER C 1189 REMARK 465 ARG C 1190 REMARK 465 LEU C 1191 REMARK 465 ASP C 1192 REMARK 465 ARG C 1193 REMARK 465 ARG C 1272 REMARK 465 ASP C 1273 REMARK 465 HIS C 1274 REMARK 465 GLY D 1183 REMARK 465 PRO D 1184 REMARK 465 GLY D 1185 REMARK 465 SER D 1186 REMARK 465 ASP D 1187 REMARK 465 GLU D 1188 REMARK 465 SER D 1189 REMARK 465 ARG D 1190 REMARK 465 LEU D 1191 REMARK 465 ASP D 1192 REMARK 465 ARG D 1193 REMARK 465 ARG D 1272 REMARK 465 ASP D 1273 REMARK 465 HIS D 1274 REMARK 465 GLY E 1183 REMARK 465 PRO E 1184 REMARK 465 GLY E 1185 REMARK 465 SER E 1186 REMARK 465 ASP E 1187 REMARK 465 GLU E 1188 REMARK 465 ASP E 1273 REMARK 465 HIS E 1274 REMARK 465 GLY F 1183 REMARK 465 PRO F 1184 REMARK 465 GLY F 1185 REMARK 465 SER F 1186 REMARK 465 ASP F 1187 REMARK 465 GLU F 1188 REMARK 465 SER F 1189 REMARK 465 ARG F 1190 REMARK 465 LEU F 1191 REMARK 465 ASP F 1192 REMARK 465 ASP F 1273 REMARK 465 HIS F 1274 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A1192 CG OD1 OD2 REMARK 470 ARG A1193 CG CD NE CZ NH1 NH2 REMARK 470 GLU A1194 CG CD OE1 OE2 REMARK 470 TYR A1195 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A1197 CG CD OE1 OE2 REMARK 470 LYS A1203 CG CD CE NZ REMARK 470 ARG A1205 CG CD NE CZ NH1 NH2 REMARK 470 GLU A1214 CG CD OE1 OE2 REMARK 470 ARG A1218 CG CD NE CZ NH1 NH2 REMARK 470 GLU A1225 CG CD OE1 OE2 REMARK 470 MET A1232 CG SD CE REMARK 470 GLU A1242 CG CD OE1 OE2 REMARK 470 LYS A1243 CG CD CE NZ REMARK 470 GLN A1247 CG CD OE1 NE2 REMARK 470 GLN A1248 CG CD OE1 NE2 REMARK 470 TYR B1195 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B1196 CG CD OE1 OE2 REMARK 470 GLU B1197 CG CD OE1 OE2 REMARK 470 GLU B1204 CG CD OE1 OE2 REMARK 470 GLU B1214 CG CD OE1 OE2 REMARK 470 GLU B1215 CG CD OE1 OE2 REMARK 470 ARG B1218 CG CD NE CZ NH1 NH2 REMARK 470 GLU B1225 CG CD OE1 OE2 REMARK 470 MET B1232 CG SD CE REMARK 470 LYS B1243 CG CD CE NZ REMARK 470 ARG B1244 CG CD NE CZ NH1 NH2 REMARK 470 ARG B1246 CG CD NE CZ NH1 NH2 REMARK 470 GLN B1247 CG CD OE1 NE2 REMARK 470 GLN B1249 CG CD OE1 NE2 REMARK 470 ARG B1271 CG CD NE CZ NH1 NH2 REMARK 470 ARG B1272 CG CD NE CZ NH1 NH2 REMARK 470 GLU C1194 CG CD OE1 OE2 REMARK 470 TYR C1195 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU C1196 CG CD OE1 OE2 REMARK 470 GLU C1197 CG CD OE1 OE2 REMARK 470 GLU C1198 CG CD OE1 OE2 REMARK 470 LYS C1203 CG CD CE NZ REMARK 470 ARG C1205 CG CD NE CZ NH1 NH2 REMARK 470 LYS C1212 CG CD CE NZ REMARK 470 LYS C1229 CG CD CE NZ REMARK 470 ARG C1244 CG CD NE CZ NH1 NH2 REMARK 470 GLN C1249 CG CD OE1 NE2 REMARK 470 GLU C1269 CG CD OE1 OE2 REMARK 470 ARG C1271 CG CD NE CZ NH1 NH2 REMARK 470 GLU D1194 CG CD OE1 OE2 REMARK 470 GLU D1196 CG CD OE1 OE2 REMARK 470 LYS D1203 CG CD CE NZ REMARK 470 LYS D1229 CG CD CE NZ REMARK 470 GLN D1240 CG CD OE1 NE2 REMARK 470 LYS D1243 CG CD CE NZ REMARK 470 ARG D1244 CG CD NE CZ NH1 NH2 REMARK 470 ARG D1246 CG CD NE CZ NH1 NH2 REMARK 470 GLU D1251 CG CD OE1 OE2 REMARK 470 ARG D1271 CG CD NE CZ NH1 NH2 REMARK 470 LYS E1203 CE NZ REMARK 470 ARG E1211 NE CZ NH1 NH2 REMARK 470 GLU E1215 CG CD OE1 OE2 REMARK 470 LEU E1221 CG CD1 CD2 REMARK 470 GLU E1224 CG CD OE1 OE2 REMARK 470 GLU E1225 CG CD OE1 OE2 REMARK 470 GLN E1226 CG CD OE1 NE2 REMARK 470 MET E1232 CG SD CE REMARK 470 GLN E1233 CG CD OE1 NE2 REMARK 470 LYS E1243 CG CD CE NZ REMARK 470 ARG E1244 CG CD NE CZ NH1 NH2 REMARK 470 ARG E1246 CG CD NE CZ NH1 NH2 REMARK 470 GLN E1248 CG CD OE1 NE2 REMARK 470 LYS E1257 CG CD CE NZ REMARK 470 GLU E1268 CG CD OE1 OE2 REMARK 470 ARG E1271 CG CD NE CZ NH1 NH2 REMARK 470 ARG E1272 CG CD NE CZ NH1 NH2 REMARK 470 ARG F1193 CG CD NE CZ NH1 NH2 REMARK 470 TYR F1195 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU F1196 CG CD OE1 OE2 REMARK 470 GLU F1204 CG CD OE1 OE2 REMARK 470 ARG F1205 CG CD NE CZ NH1 NH2 REMARK 470 ARG F1211 CG CD NE CZ NH1 NH2 REMARK 470 GLN F1240 CG CD OE1 NE2 REMARK 470 LYS F1243 CD CE NZ REMARK 470 ARG F1246 CG CD NE CZ NH1 NH2 REMARK 470 LYS F1257 CG CD CE NZ REMARK 470 GLU F1268 CG CD OE1 OE2 REMARK 470 GLU F1269 CG CD OE1 OE2 REMARK 470 ARG F1271 CG CD NE CZ NH1 NH2 REMARK 470 ARG F1272 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER D 1258 O HOH D 1301 2.02 REMARK 500 O LEU D 1265 O HOH D 1302 2.06 REMARK 500 OE2 GLU A 1268 NH1 ARG A 1271 2.07 REMARK 500 OE1 GLU F 1267 O HOH F 1301 2.09 REMARK 500 OE1 GLU B 1268 OG SER D 1254 2.10 REMARK 500 NE2 GLN F 1249 OD2 ASP F 1253 2.16 REMARK 500 O ILE A 1256 CD1 ILE A 1260 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN C 1233 OE1 GLU E 1198 2447 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B1271 -65.26 -95.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5JXB RELATED DB: PDB DBREF1 5JXC A 1187 1274 UNP A0A0J9YUM2_MOUSE DBREF2 5JXC A A0A0J9YUM2 1171 1258 DBREF1 5JXC B 1187 1274 UNP A0A0J9YUM2_MOUSE DBREF2 5JXC B A0A0J9YUM2 1171 1258 DBREF1 5JXC C 1187 1274 UNP A0A0J9YUM2_MOUSE DBREF2 5JXC C A0A0J9YUM2 1171 1258 DBREF1 5JXC D 1187 1274 UNP A0A0J9YUM2_MOUSE DBREF2 5JXC D A0A0J9YUM2 1171 1258 DBREF1 5JXC E 1187 1274 UNP A0A0J9YUM2_MOUSE DBREF2 5JXC E A0A0J9YUM2 1171 1258 DBREF1 5JXC F 1187 1274 UNP A0A0J9YUM2_MOUSE DBREF2 5JXC F A0A0J9YUM2 1171 1258 SEQADV 5JXC GLY A 1183 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC PRO A 1184 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC GLY A 1185 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC SER A 1186 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC GLY B 1183 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC PRO B 1184 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC GLY B 1185 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC SER B 1186 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC GLY C 1183 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC PRO C 1184 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC GLY C 1185 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC SER C 1186 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC GLY D 1183 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC PRO D 1184 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC GLY D 1185 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC SER D 1186 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC GLY E 1183 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC PRO E 1184 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC GLY E 1185 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC SER E 1186 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC GLY F 1183 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC PRO F 1184 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC GLY F 1185 UNP A0A0J9YUM EXPRESSION TAG SEQADV 5JXC SER F 1186 UNP A0A0J9YUM EXPRESSION TAG SEQRES 1 A 92 GLY PRO GLY SER ASP GLU SER ARG LEU ASP ARG GLU TYR SEQRES 2 A 92 GLU GLU GLU ILE HIS SER LEU LYS GLU ARG LEU HIS MET SEQRES 3 A 92 SER ASN ARG LYS LEU GLU GLU TYR GLU ARG ARG LEU LEU SEQRES 4 A 92 SER GLN GLU GLU GLN THR SER LYS ILE LEU MET GLN TYR SEQRES 5 A 92 GLN ALA ARG LEU GLU GLN SER GLU LYS ARG LEU ARG GLN SEQRES 6 A 92 GLN GLN VAL GLU LYS ASP SER GLN ILE LYS SER ILE ILE SEQRES 7 A 92 GLY ARG LEU MET LEU VAL GLU GLU GLU LEU ARG ARG ASP SEQRES 8 A 92 HIS SEQRES 1 B 92 GLY PRO GLY SER ASP GLU SER ARG LEU ASP ARG GLU TYR SEQRES 2 B 92 GLU GLU GLU ILE HIS SER LEU LYS GLU ARG LEU HIS MET SEQRES 3 B 92 SER ASN ARG LYS LEU GLU GLU TYR GLU ARG ARG LEU LEU SEQRES 4 B 92 SER GLN GLU GLU GLN THR SER LYS ILE LEU MET GLN TYR SEQRES 5 B 92 GLN ALA ARG LEU GLU GLN SER GLU LYS ARG LEU ARG GLN SEQRES 6 B 92 GLN GLN VAL GLU LYS ASP SER GLN ILE LYS SER ILE ILE SEQRES 7 B 92 GLY ARG LEU MET LEU VAL GLU GLU GLU LEU ARG ARG ASP SEQRES 8 B 92 HIS SEQRES 1 C 92 GLY PRO GLY SER ASP GLU SER ARG LEU ASP ARG GLU TYR SEQRES 2 C 92 GLU GLU GLU ILE HIS SER LEU LYS GLU ARG LEU HIS MET SEQRES 3 C 92 SER ASN ARG LYS LEU GLU GLU TYR GLU ARG ARG LEU LEU SEQRES 4 C 92 SER GLN GLU GLU GLN THR SER LYS ILE LEU MET GLN TYR SEQRES 5 C 92 GLN ALA ARG LEU GLU GLN SER GLU LYS ARG LEU ARG GLN SEQRES 6 C 92 GLN GLN VAL GLU LYS ASP SER GLN ILE LYS SER ILE ILE SEQRES 7 C 92 GLY ARG LEU MET LEU VAL GLU GLU GLU LEU ARG ARG ASP SEQRES 8 C 92 HIS SEQRES 1 D 92 GLY PRO GLY SER ASP GLU SER ARG LEU ASP ARG GLU TYR SEQRES 2 D 92 GLU GLU GLU ILE HIS SER LEU LYS GLU ARG LEU HIS MET SEQRES 3 D 92 SER ASN ARG LYS LEU GLU GLU TYR GLU ARG ARG LEU LEU SEQRES 4 D 92 SER GLN GLU GLU GLN THR SER LYS ILE LEU MET GLN TYR SEQRES 5 D 92 GLN ALA ARG LEU GLU GLN SER GLU LYS ARG LEU ARG GLN SEQRES 6 D 92 GLN GLN VAL GLU LYS ASP SER GLN ILE LYS SER ILE ILE SEQRES 7 D 92 GLY ARG LEU MET LEU VAL GLU GLU GLU LEU ARG ARG ASP SEQRES 8 D 92 HIS SEQRES 1 E 92 GLY PRO GLY SER ASP GLU SER ARG LEU ASP ARG GLU TYR SEQRES 2 E 92 GLU GLU GLU ILE HIS SER LEU LYS GLU ARG LEU HIS MET SEQRES 3 E 92 SER ASN ARG LYS LEU GLU GLU TYR GLU ARG ARG LEU LEU SEQRES 4 E 92 SER GLN GLU GLU GLN THR SER LYS ILE LEU MET GLN TYR SEQRES 5 E 92 GLN ALA ARG LEU GLU GLN SER GLU LYS ARG LEU ARG GLN SEQRES 6 E 92 GLN GLN VAL GLU LYS ASP SER GLN ILE LYS SER ILE ILE SEQRES 7 E 92 GLY ARG LEU MET LEU VAL GLU GLU GLU LEU ARG ARG ASP SEQRES 8 E 92 HIS SEQRES 1 F 92 GLY PRO GLY SER ASP GLU SER ARG LEU ASP ARG GLU TYR SEQRES 2 F 92 GLU GLU GLU ILE HIS SER LEU LYS GLU ARG LEU HIS MET SEQRES 3 F 92 SER ASN ARG LYS LEU GLU GLU TYR GLU ARG ARG LEU LEU SEQRES 4 F 92 SER GLN GLU GLU GLN THR SER LYS ILE LEU MET GLN TYR SEQRES 5 F 92 GLN ALA ARG LEU GLU GLN SER GLU LYS ARG LEU ARG GLN SEQRES 6 F 92 GLN GLN VAL GLU LYS ASP SER GLN ILE LYS SER ILE ILE SEQRES 7 F 92 GLY ARG LEU MET LEU VAL GLU GLU GLU LEU ARG ARG ASP SEQRES 8 F 92 HIS FORMUL 7 HOH *36(H2 O) HELIX 1 AA1 SER A 1189 ASP A 1273 1 85 HELIX 2 AA2 GLU B 1196 ARG B 1272 1 77 HELIX 3 AA3 TYR C 1195 ARG C 1271 1 77 HELIX 4 AA4 TYR D 1195 LEU D 1270 1 76 HELIX 5 AA5 ARG E 1190 LEU E 1270 1 81 HELIX 6 AA6 GLU F 1194 LEU F 1270 1 77 CRYST1 28.803 236.664 42.207 90.00 96.92 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.034719 0.000000 0.004215 0.00000 SCALE2 0.000000 0.004225 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023867 0.00000