HEADER ISOMERASE 13-MAY-16 5JXZ TITLE A LOW MAGNESIUM STRUCTURE OF THE ISOCHORISMATE SYNTHASE, ENTC COMPND MOL_ID: 1; COMPND 2 MOLECULE: ISOCHORISMATE SYNTHASE ENTC; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ISOCHORISMATE MUTASE; COMPND 5 EC: 5.4.4.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI O157:H7; SOURCE 3 ORGANISM_TAXID: 83334; SOURCE 4 GENE: ENTC, Z0735, ECS0632; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) KEYWDS CHORISMATE, ISOCHORISMATE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.M.MENEELY,J.A.SUNDLOV,A.M.GULICK,A.L.LAMB REVDAT 5 27-SEP-23 5JXZ 1 LINK REVDAT 4 04-DEC-19 5JXZ 1 REMARK REVDAT 3 27-SEP-17 5JXZ 1 REMARK REVDAT 2 10-AUG-16 5JXZ 1 JRNL REVDAT 1 20-JUL-16 5JXZ 0 JRNL AUTH K.M.MENEELY,J.A.SUNDLOV,A.M.GULICK,G.R.MORAN,A.L.LAMB JRNL TITL AN OPEN AND SHUT CASE: THE INTERACTION OF MAGNESIUM WITH MST JRNL TITL 2 ENZYMES. JRNL REF J.AM.CHEM.SOC. V. 138 9277 2016 JRNL REFN ESSN 1520-5126 JRNL PMID 27373320 JRNL DOI 10.1021/JACS.6B05134 REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10_2155) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.49 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 73207 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.730 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.4962 - 4.5285 1.00 5512 154 0.2224 0.2636 REMARK 3 2 4.5285 - 3.5952 1.00 5230 148 0.1750 0.2203 REMARK 3 3 3.5952 - 3.1409 1.00 5169 144 0.1758 0.2161 REMARK 3 4 3.1409 - 2.8538 1.00 5108 144 0.1714 0.2023 REMARK 3 5 2.8538 - 2.6493 1.00 5108 144 0.1660 0.1851 REMARK 3 6 2.6493 - 2.4932 1.00 5065 141 0.1701 0.2424 REMARK 3 7 2.4932 - 2.3683 1.00 5049 142 0.1658 0.2206 REMARK 3 8 2.3683 - 2.2652 1.00 5059 143 0.1676 0.1937 REMARK 3 9 2.2652 - 2.1780 1.00 5032 140 0.1707 0.2135 REMARK 3 10 2.1780 - 2.1029 1.00 5018 140 0.1816 0.2262 REMARK 3 11 2.1029 - 2.0371 1.00 5021 141 0.1925 0.2524 REMARK 3 12 2.0371 - 1.9789 1.00 5026 141 0.2026 0.2285 REMARK 3 13 1.9789 - 1.9268 1.00 4972 140 0.2325 0.2659 REMARK 3 14 1.9268 - 1.8798 0.97 4840 136 0.2590 0.3113 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 5920 REMARK 3 ANGLE : 1.118 8028 REMARK 3 CHIRALITY : 0.063 903 REMARK 3 PLANARITY : 0.008 1065 REMARK 3 DIHEDRAL : 14.544 3586 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5JXZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221401. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL7-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.100 REMARK 200 MONOCHROMATOR : SI(111) SIDE SCATTERING I-BEAM REMARK 200 BENT SINGLE CRYSTAL; ASYMMETRIC REMARK 200 CUT 4.9650 DEG. REMARK 200 OPTICS : MIRROR: RH COATED FLAT MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 73403 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 39.490 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08100 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.93 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.75100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX (1.10_2155) REMARK 200 STARTING MODEL: 3HWO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M MES PH 6.0, 63% PEG 200, 0.05 M REMARK 280 AMMONIUM CHLORIDE, MICROBATCH, TEMPERATURE 298.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 136.10000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 40.10250 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 40.10250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 68.05000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 40.10250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 40.10250 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 204.15000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 40.10250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 40.10250 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 68.05000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 40.10250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 40.10250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 204.15000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 136.10000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 THR A 3 REMARK 465 SER A 4 REMARK 465 LEU A 5 REMARK 465 ALA A 6 REMARK 465 GLU A 7 REMARK 465 GLU A 8 REMARK 465 VAL A 9 REMARK 465 GLN A 10 REMARK 465 GLN A 11 REMARK 465 THR A 12 REMARK 465 MET A 13 REMARK 465 ALA A 14 REMARK 465 ARG A 107 REMARK 465 ARG A 108 REMARK 465 PHE A 109 REMARK 465 HIS A 391 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 THR B 3 REMARK 465 SER B 4 REMARK 465 LEU B 5 REMARK 465 ALA B 6 REMARK 465 GLU B 7 REMARK 465 GLU B 8 REMARK 465 VAL B 9 REMARK 465 GLN B 10 REMARK 465 GLN B 11 REMARK 465 THR B 12 REMARK 465 MET B 13 REMARK 465 ARG B 108 REMARK 465 PHE B 109 REMARK 465 THR B 110 REMARK 465 ARG B 111 REMARK 465 ARG B 254 REMARK 465 GLU B 255 REMARK 465 ASN B 286 REMARK 465 SER B 287 REMARK 465 HIS B 391 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE21 GLN A 219 O HOH A 501 1.54 REMARK 500 HZ3 LYS B 202 O GLY B 204 1.56 REMARK 500 O HOH A 605 O HOH A 611 2.02 REMARK 500 O HOH A 630 O HOH A 638 2.03 REMARK 500 O HOH A 603 O HOH A 611 2.03 REMARK 500 O HOH A 610 O HOH A 624 2.07 REMARK 500 NH2 ARG A 111 OG SER A 114 2.08 REMARK 500 OD2 ASP A 203 OE1 GLU B 353 2.09 REMARK 500 O HOH A 576 O HOH A 626 2.13 REMARK 500 O THR B 142 O HOH B 501 2.13 REMARK 500 O HOH A 504 O HOH A 522 2.13 REMARK 500 O HOH A 618 O HOH A 648 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 27 -85.18 -83.68 REMARK 500 SER A 87 64.81 -117.18 REMARK 500 PRO A 302 5.29 -69.08 REMARK 500 SER A 305 -74.16 -108.73 REMARK 500 PRO A 321 44.69 -90.69 REMARK 500 GLU A 325 -121.60 56.09 REMARK 500 GLU A 353 -113.55 53.06 REMARK 500 TYR B 27 -82.88 -86.42 REMARK 500 ASN B 71 69.84 -119.41 REMARK 500 SER B 87 65.03 -117.19 REMARK 500 LEU B 200 119.05 -160.47 REMARK 500 PRO B 302 1.81 -66.24 REMARK 500 SER B 305 -72.27 -107.03 REMARK 500 PRO B 321 38.62 -89.84 REMARK 500 GLU B 325 -122.12 53.22 REMARK 500 GLU B 353 -128.26 53.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 241 OE2 REMARK 620 2 GLU A 376 OE2 170.0 REMARK 620 3 ISC A 402 O1 83.6 86.5 REMARK 620 4 ISC A 402 O2 85.8 90.2 59.8 REMARK 620 5 ISJ A 403 O8 83.2 86.8 6.5 66.3 REMARK 620 6 ISJ A 403 O9 88.4 86.5 52.5 8.0 59.0 REMARK 620 7 HOH A 509 O 101.0 88.5 154.4 95.2 160.8 102.2 REMARK 620 8 HOH A 518 O 89.2 92.6 107.0 166.4 100.5 159.5 98.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 241 OE2 REMARK 620 2 GLU B 376 OE2 169.2 REMARK 620 3 ISC B 402 O1 77.4 91.9 REMARK 620 4 ISC B 402 O2 87.6 87.2 59.3 REMARK 620 5 ISJ B 403 O8 76.9 92.3 6.0 65.4 REMARK 620 6 ISJ B 403 O9 89.7 84.9 58.0 2.8 64.0 REMARK 620 7 HOH B 507 O 86.4 96.5 107.4 166.5 101.4 165.4 REMARK 620 8 HOH B 528 O 101.4 88.3 152.7 93.4 158.7 94.9 99.7 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ISC A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ISJ A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ISC B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ISJ B 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5JY4 RELATED DB: PDB REMARK 900 RELATED ID: 5JY8 RELATED DB: PDB REMARK 900 RELATED ID: 5JY9 RELATED DB: PDB DBREF 5JXZ A 1 391 UNP P0AEJ3 ENTC_ECO57 1 391 DBREF 5JXZ B 1 391 UNP P0AEJ3 ENTC_ECO57 1 391 SEQRES 1 A 391 MET ASP THR SER LEU ALA GLU GLU VAL GLN GLN THR MET SEQRES 2 A 391 ALA THR LEU ALA PRO ASN ARG PHE PHE PHE MET SER PRO SEQRES 3 A 391 TYR ARG SER PHE THR THR SER GLY CYS PHE ALA ARG PHE SEQRES 4 A 391 ASP GLU PRO ALA VAL ASN GLY ASP SER PRO ASP SER PRO SEQRES 5 A 391 PHE GLN GLN LYS LEU ALA ALA LEU PHE ALA ASP ALA LYS SEQRES 6 A 391 ALA GLN GLY ILE LYS ASN PRO VAL MET VAL GLY ALA ILE SEQRES 7 A 391 PRO PHE ASP PRO ARG GLN PRO SER SER LEU TYR ILE PRO SEQRES 8 A 391 GLU SER TRP GLN SER PHE SER ARG GLN GLU LYS GLN ALA SEQRES 9 A 391 SER ALA ARG ARG PHE THR ARG SER GLN SER LEU ASN VAL SEQRES 10 A 391 VAL GLU ARG GLN ALA ILE PRO GLU GLN THR THR PHE GLU SEQRES 11 A 391 GLN MET VAL ALA ARG ALA ALA ALA LEU THR ALA THR PRO SEQRES 12 A 391 GLN VAL ASP LYS VAL VAL LEU SER ARG LEU ILE ASP ILE SEQRES 13 A 391 THR THR ASP ALA ALA ILE ASP SER GLY VAL LEU LEU GLU SEQRES 14 A 391 ARG LEU ILE ALA GLN ASN PRO VAL SER TYR ASN PHE HIS SEQRES 15 A 391 VAL PRO LEU ALA ASP GLY GLY VAL LEU LEU GLY ALA SER SEQRES 16 A 391 PRO GLU LEU LEU LEU ARG LYS ASP GLY GLU ARG PHE SER SEQRES 17 A 391 SER ILE PRO LEU ALA GLY SER ALA ARG ARG GLN PRO ASP SEQRES 18 A 391 GLU VAL LEU ASP ARG GLU ALA GLY ASN ARG LEU LEU ALA SEQRES 19 A 391 SER GLU LYS ASP ARG HIS GLU HIS GLU LEU VAL THR GLN SEQRES 20 A 391 ALA MET LYS GLU VAL LEU ARG GLU ARG SER SER GLU LEU SEQRES 21 A 391 HIS VAL PRO SER SER PRO GLN LEU ILE THR THR PRO THR SEQRES 22 A 391 LEU TRP HIS LEU ALA THR PRO PHE GLU GLY LYS ALA ASN SEQRES 23 A 391 SER GLN GLU ASN ALA LEU THR LEU ALA CYS LEU LEU HIS SEQRES 24 A 391 PRO THR PRO ALA LEU SER GLY PHE PRO HIS GLN ALA ALA SEQRES 25 A 391 THR GLN VAL ILE ALA GLU LEU GLU PRO PHE ASP ARG GLU SEQRES 26 A 391 LEU PHE GLY GLY ILE VAL GLY TRP CYS ASP SER GLU GLY SEQRES 27 A 391 ASN GLY GLU TRP VAL VAL THR ILE ARG CYS ALA LYS LEU SEQRES 28 A 391 ARG GLU ASN GLN VAL ARG LEU PHE ALA GLY ALA GLY ILE SEQRES 29 A 391 VAL PRO ALA SER SER PRO LEU GLY GLU TRP ARG GLU THR SEQRES 30 A 391 GLY VAL LYS LEU SER THR MET LEU ASN VAL PHE GLY LEU SEQRES 31 A 391 HIS SEQRES 1 B 391 MET ASP THR SER LEU ALA GLU GLU VAL GLN GLN THR MET SEQRES 2 B 391 ALA THR LEU ALA PRO ASN ARG PHE PHE PHE MET SER PRO SEQRES 3 B 391 TYR ARG SER PHE THR THR SER GLY CYS PHE ALA ARG PHE SEQRES 4 B 391 ASP GLU PRO ALA VAL ASN GLY ASP SER PRO ASP SER PRO SEQRES 5 B 391 PHE GLN GLN LYS LEU ALA ALA LEU PHE ALA ASP ALA LYS SEQRES 6 B 391 ALA GLN GLY ILE LYS ASN PRO VAL MET VAL GLY ALA ILE SEQRES 7 B 391 PRO PHE ASP PRO ARG GLN PRO SER SER LEU TYR ILE PRO SEQRES 8 B 391 GLU SER TRP GLN SER PHE SER ARG GLN GLU LYS GLN ALA SEQRES 9 B 391 SER ALA ARG ARG PHE THR ARG SER GLN SER LEU ASN VAL SEQRES 10 B 391 VAL GLU ARG GLN ALA ILE PRO GLU GLN THR THR PHE GLU SEQRES 11 B 391 GLN MET VAL ALA ARG ALA ALA ALA LEU THR ALA THR PRO SEQRES 12 B 391 GLN VAL ASP LYS VAL VAL LEU SER ARG LEU ILE ASP ILE SEQRES 13 B 391 THR THR ASP ALA ALA ILE ASP SER GLY VAL LEU LEU GLU SEQRES 14 B 391 ARG LEU ILE ALA GLN ASN PRO VAL SER TYR ASN PHE HIS SEQRES 15 B 391 VAL PRO LEU ALA ASP GLY GLY VAL LEU LEU GLY ALA SER SEQRES 16 B 391 PRO GLU LEU LEU LEU ARG LYS ASP GLY GLU ARG PHE SER SEQRES 17 B 391 SER ILE PRO LEU ALA GLY SER ALA ARG ARG GLN PRO ASP SEQRES 18 B 391 GLU VAL LEU ASP ARG GLU ALA GLY ASN ARG LEU LEU ALA SEQRES 19 B 391 SER GLU LYS ASP ARG HIS GLU HIS GLU LEU VAL THR GLN SEQRES 20 B 391 ALA MET LYS GLU VAL LEU ARG GLU ARG SER SER GLU LEU SEQRES 21 B 391 HIS VAL PRO SER SER PRO GLN LEU ILE THR THR PRO THR SEQRES 22 B 391 LEU TRP HIS LEU ALA THR PRO PHE GLU GLY LYS ALA ASN SEQRES 23 B 391 SER GLN GLU ASN ALA LEU THR LEU ALA CYS LEU LEU HIS SEQRES 24 B 391 PRO THR PRO ALA LEU SER GLY PHE PRO HIS GLN ALA ALA SEQRES 25 B 391 THR GLN VAL ILE ALA GLU LEU GLU PRO PHE ASP ARG GLU SEQRES 26 B 391 LEU PHE GLY GLY ILE VAL GLY TRP CYS ASP SER GLU GLY SEQRES 27 B 391 ASN GLY GLU TRP VAL VAL THR ILE ARG CYS ALA LYS LEU SEQRES 28 B 391 ARG GLU ASN GLN VAL ARG LEU PHE ALA GLY ALA GLY ILE SEQRES 29 B 391 VAL PRO ALA SER SER PRO LEU GLY GLU TRP ARG GLU THR SEQRES 30 B 391 GLY VAL LYS LEU SER THR MET LEU ASN VAL PHE GLY LEU SEQRES 31 B 391 HIS HET MG A 401 1 HET ISC A 402 24 HET ISJ A 403 24 HET MG B 401 1 HET ISC B 402 24 HET ISJ B 403 24 HETNAM MG MAGNESIUM ION HETNAM ISC (5S,6S)-5-[(1-CARBOXYETHENYL)OXY]-6-HYDROXYCYCLOHEXA-1, HETNAM 2 ISC 3-DIENE-1-CARBOXYLIC ACID HETNAM ISJ (3R,4R)-3-[(1-CARBOXYETHENYL)OXY]-4-HYDROXYCYCLOHEXA-1, HETNAM 2 ISJ 5-DIENE-1-CARBOXYLIC ACID HETSYN ISC ISOCHORISMIC ACID HETSYN ISJ CHORISMIC ACID FORMUL 3 MG 2(MG 2+) FORMUL 4 ISC 2(C10 H10 O6) FORMUL 5 ISJ 2(C10 H10 O6) FORMUL 9 HOH *269(H2 O) HELIX 1 AA1 SER A 51 GLN A 67 1 17 HELIX 2 AA2 SER A 98 ALA A 106 1 9 HELIX 3 AA3 GLU A 125 ALA A 141 1 17 HELIX 4 AA4 ASP A 163 ASN A 175 1 13 HELIX 5 AA5 ASP A 221 ALA A 234 1 14 HELIX 6 AA6 SER A 235 GLU A 255 1 21 HELIX 7 AA7 ASN A 290 HIS A 299 1 10 HELIX 8 AA8 PRO A 308 GLU A 320 1 13 HELIX 9 AA9 SER A 369 GLY A 389 1 21 HELIX 10 AB1 SER B 51 GLN B 67 1 17 HELIX 11 AB2 SER B 98 ARG B 107 1 10 HELIX 12 AB3 GLU B 125 ALA B 141 1 17 HELIX 13 AB4 ASP B 163 ASN B 175 1 13 HELIX 14 AB5 ASP B 221 ALA B 234 1 14 HELIX 15 AB6 SER B 235 LEU B 253 1 19 HELIX 16 AB7 ASN B 290 HIS B 299 1 10 HELIX 17 AB8 PRO B 308 GLU B 320 1 13 HELIX 18 AB9 SER B 369 GLY B 389 1 21 SHEET 1 AA1 9 SER A 93 SER A 96 0 SHEET 2 AA1 9 PHE A 30 SER A 33 -1 N THR A 31 O GLN A 95 SHEET 3 AA1 9 PHE A 22 MET A 24 -1 N PHE A 23 O PHE A 30 SHEET 4 AA1 9 TYR A 179 PRO A 184 -1 O ASN A 180 N MET A 24 SHEET 5 AA1 9 VAL A 190 SER A 195 -1 O LEU A 191 N VAL A 183 SHEET 6 AA1 9 CYS A 348 ARG A 352 -1 O LEU A 351 N VAL A 190 SHEET 7 AA1 9 GLN A 355 ILE A 364 -1 O GLN A 355 N ARG A 352 SHEET 8 AA1 9 LYS A 147 THR A 158 -1 N VAL A 148 O ILE A 364 SHEET 9 AA1 9 VAL A 117 ILE A 123 -1 N ILE A 123 O LEU A 153 SHEET 1 AA2 9 SER A 93 SER A 96 0 SHEET 2 AA2 9 PHE A 30 SER A 33 -1 N THR A 31 O GLN A 95 SHEET 3 AA2 9 PHE A 22 MET A 24 -1 N PHE A 23 O PHE A 30 SHEET 4 AA2 9 TYR A 179 PRO A 184 -1 O ASN A 180 N MET A 24 SHEET 5 AA2 9 VAL A 190 SER A 195 -1 O LEU A 191 N VAL A 183 SHEET 6 AA2 9 CYS A 348 ARG A 352 -1 O LEU A 351 N VAL A 190 SHEET 7 AA2 9 GLN A 355 ILE A 364 -1 O GLN A 355 N ARG A 352 SHEET 8 AA2 9 LYS A 147 THR A 158 -1 N VAL A 148 O ILE A 364 SHEET 9 AA2 9 GLY A 306 PHE A 307 -1 O PHE A 307 N LYS A 147 SHEET 1 AA3 9 ALA A 37 PHE A 39 0 SHEET 2 AA3 9 SER A 87 ILE A 90 -1 O LEU A 88 N PHE A 39 SHEET 3 AA3 9 VAL A 73 ILE A 78 -1 N ALA A 77 O SER A 87 SHEET 4 AA3 9 ILE A 330 ASP A 335 -1 O CYS A 334 N MET A 74 SHEET 5 AA3 9 GLY A 340 VAL A 344 -1 O VAL A 343 N VAL A 331 SHEET 6 AA3 9 LEU A 198 ASP A 203 -1 N LEU A 200 O TRP A 342 SHEET 7 AA3 9 ARG A 206 SER A 209 -1 O ARG A 206 N ASP A 203 SHEET 8 AA3 9 PHE A 281 LYS A 284 -1 O PHE A 281 N SER A 209 SHEET 9 AA3 9 GLU A 259 HIS A 261 -1 N HIS A 261 O GLU A 282 SHEET 1 AA4 3 LEU A 212 ARG A 217 0 SHEET 2 AA4 3 LEU A 274 ALA A 278 -1 O TRP A 275 N ALA A 216 SHEET 3 AA4 3 GLN A 267 THR A 270 -1 N GLN A 267 O ALA A 278 SHEET 1 AA5 9 SER B 93 SER B 96 0 SHEET 2 AA5 9 PHE B 30 SER B 33 -1 N THR B 31 O GLN B 95 SHEET 3 AA5 9 PHE B 22 MET B 24 -1 N PHE B 23 O PHE B 30 SHEET 4 AA5 9 TYR B 179 PRO B 184 -1 O ASN B 180 N MET B 24 SHEET 5 AA5 9 VAL B 190 SER B 195 -1 O LEU B 191 N VAL B 183 SHEET 6 AA5 9 CYS B 348 ARG B 352 -1 O ALA B 349 N LEU B 192 SHEET 7 AA5 9 GLN B 355 ILE B 364 -1 O GLN B 355 N ARG B 352 SHEET 8 AA5 9 LYS B 147 THR B 158 -1 N VAL B 148 O ILE B 364 SHEET 9 AA5 9 VAL B 117 ILE B 123 -1 N GLN B 121 O ASP B 155 SHEET 1 AA6 9 SER B 93 SER B 96 0 SHEET 2 AA6 9 PHE B 30 SER B 33 -1 N THR B 31 O GLN B 95 SHEET 3 AA6 9 PHE B 22 MET B 24 -1 N PHE B 23 O PHE B 30 SHEET 4 AA6 9 TYR B 179 PRO B 184 -1 O ASN B 180 N MET B 24 SHEET 5 AA6 9 VAL B 190 SER B 195 -1 O LEU B 191 N VAL B 183 SHEET 6 AA6 9 CYS B 348 ARG B 352 -1 O ALA B 349 N LEU B 192 SHEET 7 AA6 9 GLN B 355 ILE B 364 -1 O GLN B 355 N ARG B 352 SHEET 8 AA6 9 LYS B 147 THR B 158 -1 N VAL B 148 O ILE B 364 SHEET 9 AA6 9 GLY B 306 PHE B 307 -1 O PHE B 307 N LYS B 147 SHEET 1 AA7 9 ALA B 37 PHE B 39 0 SHEET 2 AA7 9 SER B 87 ILE B 90 -1 O LEU B 88 N PHE B 39 SHEET 3 AA7 9 VAL B 73 ILE B 78 -1 N VAL B 75 O TYR B 89 SHEET 4 AA7 9 ILE B 330 ASP B 335 -1 O CYS B 334 N MET B 74 SHEET 5 AA7 9 GLY B 340 VAL B 344 -1 O VAL B 343 N VAL B 331 SHEET 6 AA7 9 LEU B 198 ASP B 203 -1 N LYS B 202 O GLY B 340 SHEET 7 AA7 9 ARG B 206 SER B 209 -1 O ARG B 206 N ASP B 203 SHEET 8 AA7 9 PHE B 281 LYS B 284 -1 O PHE B 281 N SER B 209 SHEET 9 AA7 9 GLU B 259 HIS B 261 -1 N HIS B 261 O GLU B 282 SHEET 1 AA8 3 LEU B 212 ARG B 217 0 SHEET 2 AA8 3 LEU B 274 ALA B 278 -1 O TRP B 275 N ALA B 216 SHEET 3 AA8 3 GLN B 267 THR B 270 -1 N GLN B 267 O ALA B 278 LINK OE2 GLU A 241 MG MG A 401 1555 1555 1.93 LINK OE2 GLU A 376 MG MG A 401 1555 1555 2.02 LINK MG MG A 401 O1 AISC A 402 1555 1555 1.83 LINK MG MG A 401 O2 AISC A 402 1555 1555 2.43 LINK MG MG A 401 O8 BISJ A 403 1555 1555 2.40 LINK MG MG A 401 O9 BISJ A 403 1555 1555 1.92 LINK MG MG A 401 O HOH A 509 1555 1555 2.07 LINK MG MG A 401 O HOH A 518 1555 1555 2.04 LINK OE2 GLU B 241 MG MG B 401 1555 1555 1.95 LINK OE2 GLU B 376 MG MG B 401 1555 1555 2.02 LINK MG MG B 401 O1 AISC B 402 1555 1555 2.10 LINK MG MG B 401 O2 AISC B 402 1555 1555 2.35 LINK MG MG B 401 O8 BISJ B 403 1555 1555 2.18 LINK MG MG B 401 O9 BISJ B 403 1555 1555 1.95 LINK MG MG B 401 O HOH B 507 1555 1555 2.05 LINK MG MG B 401 O HOH B 528 1555 1555 2.05 CISPEP 1 ILE A 123 PRO A 124 0 -7.73 CISPEP 2 HIS A 299 PRO A 300 0 -6.93 CISPEP 3 PHE A 307 PRO A 308 0 -6.37 CISPEP 4 ILE B 123 PRO B 124 0 -10.37 CISPEP 5 HIS B 299 PRO B 300 0 -9.59 CISPEP 6 PHE B 307 PRO B 308 0 -6.32 SITE 1 AC1 6 GLU A 241 GLU A 376 ISC A 402 ISJ A 403 SITE 2 AC1 6 HOH A 509 HOH A 518 SITE 1 AC2 19 GLU A 197 LEU A 212 GLY A 214 SER A 215 SITE 2 AC2 19 GLU A 241 ALA A 303 LEU A 304 ILE A 346 SITE 3 AC2 19 ARG A 347 ALA A 360 GLY A 361 ALA A 362 SITE 4 AC2 19 GLY A 363 GLU A 376 LYS A 380 MG A 401 SITE 5 AC2 19 ISJ A 403 HOH A 503 HOH A 521 SITE 1 AC3 17 GLU A 197 LEU A 212 GLY A 214 SER A 215 SITE 2 AC3 17 GLU A 241 ALA A 303 ILE A 346 ARG A 347 SITE 3 AC3 17 ALA A 360 GLY A 361 ALA A 362 GLY A 363 SITE 4 AC3 17 GLU A 376 LYS A 380 MG A 401 ISC A 402 SITE 5 AC3 17 HOH A 503 SITE 1 AC4 6 GLU B 241 GLU B 376 ISC B 402 ISJ B 403 SITE 2 AC4 6 HOH B 507 HOH B 528 SITE 1 AC5 18 GLU B 197 LEU B 212 GLY B 214 SER B 215 SITE 2 AC5 18 GLU B 241 ALA B 303 ILE B 346 ARG B 347 SITE 3 AC5 18 ALA B 360 GLY B 361 ALA B 362 GLY B 363 SITE 4 AC5 18 GLU B 376 LYS B 380 MG B 401 ISJ B 403 SITE 5 AC5 18 HOH B 502 HOH B 512 SITE 1 AC6 20 GLU B 197 LEU B 212 GLY B 214 SER B 215 SITE 2 AC6 20 GLU B 241 ALA B 303 LEU B 304 ILE B 346 SITE 3 AC6 20 ARG B 347 ALA B 360 GLY B 361 ALA B 362 SITE 4 AC6 20 GLY B 363 GLU B 376 LYS B 380 MG B 401 SITE 5 AC6 20 ISC B 402 HOH B 502 HOH B 512 HOH B 528 CRYST1 80.205 80.205 272.200 90.00 90.00 90.00 P 41 21 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012468 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012468 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003674 0.00000