HEADER PROTEIN BINDING 19-MAY-16 5K3N TITLE CRYSTAL STRUCTURE OF RETINOIC ACID RECEPTOR-RELATED ORPHAN RECEPTOR TITLE 2 (ROR) GAMMA LIGAND BINDING DOMAIN COMPLEX WITH ML209 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NUCLEAR RECEPTOR ROR-GAMMA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: LIGAND BINDING DOMAIN; COMPND 5 SYNONYM: NUCLEAR RECEPTOR RZR-GAMMA,NUCLEAR RECEPTOR SUBFAMILY 1 COMPND 6 GROUP F MEMBER 3,RAR-RELATED ORPHAN RECEPTOR C,RETINOID-RELATED COMPND 7 ORPHAN RECEPTOR-GAMMA; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RORC, NR1F3, RORG, RZRG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS DOUBLE HELIX, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR P.HUANG,F.RASTINEJAD,J.LU REVDAT 2 06-MAR-24 5K3N 1 REMARK REVDAT 1 31-MAY-17 5K3N 0 JRNL AUTH P.HUANG,F.RASTINEJAD JRNL TITL CRYSTAL STRUCTURE OF RETINOIC ACID RECEPTOR-RELATED ORPHAN JRNL TITL 2 RECEPTOR (ROR) GAMMA LIGAND BINDING DOMAIN COMPLEX WITH JRNL TITL 3 ML209 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 38437 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.258 REMARK 3 R VALUE (WORKING SET) : 0.257 REMARK 3 FREE R VALUE : 0.285 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1952 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.1531 - 6.4069 0.92 2575 143 0.1418 0.1771 REMARK 3 2 6.4069 - 5.0942 0.94 2647 151 0.2369 0.2665 REMARK 3 3 5.0942 - 4.4528 0.93 2601 145 0.2148 0.2755 REMARK 3 4 4.4528 - 4.0468 0.93 2596 124 0.2332 0.2456 REMARK 3 5 4.0468 - 3.7574 0.93 2612 140 0.2560 0.2731 REMARK 3 6 3.7574 - 3.5363 0.93 2605 131 0.3067 0.3437 REMARK 3 7 3.5363 - 3.3595 0.93 2572 146 0.3594 0.3792 REMARK 3 8 3.3595 - 3.2134 0.94 2668 127 0.3890 0.3890 REMARK 3 9 3.2134 - 3.0898 0.93 2586 162 0.3908 0.3624 REMARK 3 10 3.0898 - 2.9833 0.94 2630 121 0.4312 0.4885 REMARK 3 11 2.9833 - 2.8901 0.94 2620 136 0.4537 0.4639 REMARK 3 12 2.8901 - 2.8076 0.93 2628 149 0.4300 0.5001 REMARK 3 13 2.8076 - 2.7337 0.92 2557 142 0.4359 0.5089 REMARK 3 14 2.7337 - 2.6671 0.91 2557 113 0.4662 0.4424 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 42.360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 122.2 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.4900 REMARK 3 OPERATOR: -H,-K,L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 7736 REMARK 3 ANGLE : 1.036 10417 REMARK 3 CHIRALITY : 0.051 1133 REMARK 3 PLANARITY : 0.003 1317 REMARK 3 DIHEDRAL : 18.290 2917 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 265:492 REMARK 3 ORIGIN FOR THE GROUP (A): 14.5944 -31.4980 -8.5016 REMARK 3 T TENSOR REMARK 3 T11: 1.0370 T22: 1.1440 REMARK 3 T33: 0.8223 T12: -0.0894 REMARK 3 T13: -0.0537 T23: 0.0970 REMARK 3 L TENSOR REMARK 3 L11: 1.2464 L22: 1.2991 REMARK 3 L33: 1.4727 L12: 0.3237 REMARK 3 L13: -0.0209 L23: 0.1959 REMARK 3 S TENSOR REMARK 3 S11: 0.0965 S12: -0.0530 S13: -0.2291 REMARK 3 S21: 0.2024 S22: -0.0245 S23: -0.1288 REMARK 3 S31: -0.1179 S32: -0.9552 S33: -0.0771 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN B AND RESID 265:490 REMARK 3 ORIGIN FOR THE GROUP (A): 34.6529 -3.1372 17.0842 REMARK 3 T TENSOR REMARK 3 T11: 1.6708 T22: 0.0861 REMARK 3 T33: 1.0041 T12: 0.0856 REMARK 3 T13: -0.1212 T23: 0.0423 REMARK 3 L TENSOR REMARK 3 L11: 0.7430 L22: 0.3145 REMARK 3 L33: 1.6513 L12: -0.2553 REMARK 3 L13: 0.3485 L23: -0.1370 REMARK 3 S TENSOR REMARK 3 S11: 0.3051 S12: -0.4522 S13: 0.1210 REMARK 3 S21: -0.0025 S22: -0.1482 S23: -0.3176 REMARK 3 S31: 0.9617 S32: -1.0384 S33: -0.0314 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN C AND RESID 265:492 REMARK 3 ORIGIN FOR THE GROUP (A): 74.8686 -31.5138 7.6208 REMARK 3 T TENSOR REMARK 3 T11: 0.9394 T22: 0.9625 REMARK 3 T33: 0.8513 T12: 0.2320 REMARK 3 T13: -0.0474 T23: -0.0906 REMARK 3 L TENSOR REMARK 3 L11: 1.1576 L22: 1.2787 REMARK 3 L33: 1.4316 L12: -0.5347 REMARK 3 L13: -0.0041 L23: -0.0362 REMARK 3 S TENSOR REMARK 3 S11: 0.0862 S12: 0.1124 S13: -0.3763 REMARK 3 S21: -0.2136 S22: -0.0336 S23: 0.1772 REMARK 3 S31: 0.0171 S32: 0.7205 S33: -0.0518 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN D AND RESID 265:492 REMARK 3 ORIGIN FOR THE GROUP (A): 54.7661 -3.1234 -18.0806 REMARK 3 T TENSOR REMARK 3 T11: 1.2911 T22: 0.6714 REMARK 3 T33: 0.8898 T12: 0.0162 REMARK 3 T13: -0.0355 T23: -0.0241 REMARK 3 L TENSOR REMARK 3 L11: 1.0570 L22: 0.4148 REMARK 3 L33: 1.9664 L12: 0.2236 REMARK 3 L13: 0.0971 L23: -0.0105 REMARK 3 S TENSOR REMARK 3 S11: 0.2407 S12: 0.0594 S13: 0.1113 REMARK 3 S21: 0.0693 S22: -0.1449 S23: 0.4584 REMARK 3 S31: 1.0234 S32: 0.9084 S33: -0.0990 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5K3N COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221666. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38439 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.660 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 12.1100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.66 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.71 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.64200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.4M POTASSIUM SODIUM TARTRATE REMARK 280 TETRAHYDRATE, PH 8, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.24367 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 102.48733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 261 REMARK 465 SER A 262 REMARK 465 HIS A 263 REMARK 465 MET A 264 REMARK 465 VAL A 493 REMARK 465 VAL A 494 REMARK 465 GLN A 495 REMARK 465 ALA A 496 REMARK 465 ALA A 497 REMARK 465 PHE A 498 REMARK 465 PRO A 499 REMARK 465 PRO A 500 REMARK 465 LEU A 501 REMARK 465 TYR A 502 REMARK 465 LYS A 503 REMARK 465 GLU A 504 REMARK 465 LEU A 505 REMARK 465 PHE A 506 REMARK 465 SER A 507 REMARK 465 GLY B 261 REMARK 465 SER B 262 REMARK 465 HIS B 263 REMARK 465 MET B 264 REMARK 465 PRO B 491 REMARK 465 ILE B 492 REMARK 465 VAL B 493 REMARK 465 VAL B 494 REMARK 465 GLN B 495 REMARK 465 ALA B 496 REMARK 465 ALA B 497 REMARK 465 PHE B 498 REMARK 465 PRO B 499 REMARK 465 PRO B 500 REMARK 465 LEU B 501 REMARK 465 TYR B 502 REMARK 465 LYS B 503 REMARK 465 GLU B 504 REMARK 465 LEU B 505 REMARK 465 PHE B 506 REMARK 465 SER B 507 REMARK 465 GLY C 261 REMARK 465 SER C 262 REMARK 465 HIS C 263 REMARK 465 MET C 264 REMARK 465 VAL C 493 REMARK 465 VAL C 494 REMARK 465 GLN C 495 REMARK 465 ALA C 496 REMARK 465 ALA C 497 REMARK 465 PHE C 498 REMARK 465 PRO C 499 REMARK 465 PRO C 500 REMARK 465 LEU C 501 REMARK 465 TYR C 502 REMARK 465 LYS C 503 REMARK 465 GLU C 504 REMARK 465 LEU C 505 REMARK 465 PHE C 506 REMARK 465 SER C 507 REMARK 465 GLY D 261 REMARK 465 SER D 262 REMARK 465 HIS D 263 REMARK 465 MET D 264 REMARK 465 VAL D 493 REMARK 465 VAL D 494 REMARK 465 GLN D 495 REMARK 465 ALA D 496 REMARK 465 ALA D 497 REMARK 465 PHE D 498 REMARK 465 PRO D 499 REMARK 465 PRO D 500 REMARK 465 LEU D 501 REMARK 465 TYR D 502 REMARK 465 LYS D 503 REMARK 465 GLU D 504 REMARK 465 LEU D 505 REMARK 465 PHE D 506 REMARK 465 SER D 507 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 271 -74.13 -55.99 REMARK 500 THR A 284 33.01 -87.16 REMARK 500 GLN A 286 -75.70 53.12 REMARK 500 ARG A 337 11.58 -68.78 REMARK 500 CYS A 393 55.56 -145.92 REMARK 500 SER A 406 5.47 -66.29 REMARK 500 GLU A 435 54.22 -105.22 REMARK 500 LEU A 463 -2.03 -59.44 REMARK 500 HIS A 488 78.74 -115.57 REMARK 500 GLN B 286 -66.66 60.98 REMARK 500 ARG B 302 0.71 -65.59 REMARK 500 LEU B 324 -73.18 -52.41 REMARK 500 PHE B 388 40.92 -109.67 REMARK 500 GLN B 434 -62.57 -106.30 REMARK 500 PHE B 450 -73.09 -60.41 REMARK 500 GLN B 460 -5.49 -58.21 REMARK 500 LEU B 483 -33.10 -133.20 REMARK 500 PHE B 486 -76.62 -92.40 REMARK 500 GLN B 487 74.92 -104.29 REMARK 500 HIS B 488 39.64 -72.05 REMARK 500 GLU C 271 -70.35 -58.67 REMARK 500 THR C 284 35.35 -93.68 REMARK 500 GLN C 286 -78.06 54.93 REMARK 500 GLU C 343 3.04 -64.85 REMARK 500 ARG C 364 -8.96 -59.89 REMARK 500 CYS C 393 52.65 -143.23 REMARK 500 GLU C 435 57.65 -113.17 REMARK 500 SER C 474 1.95 -69.44 REMARK 500 GLN C 487 137.86 -175.04 REMARK 500 HIS C 488 77.42 -119.91 REMARK 500 GLN D 286 -71.24 62.01 REMARK 500 ARG D 302 2.27 -67.24 REMARK 500 LYS D 311 175.41 -59.75 REMARK 500 PHE D 388 45.79 -105.91 REMARK 500 SER D 406 9.31 -62.96 REMARK 500 LEU D 425 -70.76 -50.89 REMARK 500 GLN D 434 -60.09 -101.73 REMARK 500 PHE D 450 -70.58 -64.32 REMARK 500 HIS D 488 71.87 -64.23 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6Q6 A 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6Q6 B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6Q6 C 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6Q6 D 600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5K3M RELATED DB: PDB REMARK 900 RELATED ID: 5K3L RELATED DB: PDB REMARK 900 RELATED ID: 5K38 RELATED DB: PDB DBREF 5K3N A 265 507 UNP P51449 RORG_HUMAN 244 486 DBREF 5K3N B 265 507 UNP P51449 RORG_HUMAN 244 486 DBREF 5K3N C 265 507 UNP P51449 RORG_HUMAN 244 486 DBREF 5K3N D 265 507 UNP P51449 RORG_HUMAN 244 486 SEQADV 5K3N GLY A 261 UNP P51449 EXPRESSION TAG SEQADV 5K3N SER A 262 UNP P51449 EXPRESSION TAG SEQADV 5K3N HIS A 263 UNP P51449 EXPRESSION TAG SEQADV 5K3N MET A 264 UNP P51449 EXPRESSION TAG SEQADV 5K3N GLY B 261 UNP P51449 EXPRESSION TAG SEQADV 5K3N SER B 262 UNP P51449 EXPRESSION TAG SEQADV 5K3N HIS B 263 UNP P51449 EXPRESSION TAG SEQADV 5K3N MET B 264 UNP P51449 EXPRESSION TAG SEQADV 5K3N GLY C 261 UNP P51449 EXPRESSION TAG SEQADV 5K3N SER C 262 UNP P51449 EXPRESSION TAG SEQADV 5K3N HIS C 263 UNP P51449 EXPRESSION TAG SEQADV 5K3N MET C 264 UNP P51449 EXPRESSION TAG SEQADV 5K3N GLY D 261 UNP P51449 EXPRESSION TAG SEQADV 5K3N SER D 262 UNP P51449 EXPRESSION TAG SEQADV 5K3N HIS D 263 UNP P51449 EXPRESSION TAG SEQADV 5K3N MET D 264 UNP P51449 EXPRESSION TAG SEQRES 1 A 247 GLY SER HIS MET ALA SER LEU THR GLU ILE GLU HIS LEU SEQRES 2 A 247 VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS GLN SEQRES 3 A 247 LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN ILE SEQRES 4 A 247 PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SER SEQRES 5 A 247 MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU THR SEQRES 6 A 247 GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG LEU SEQRES 7 A 247 SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE VAL SEQRES 8 A 247 LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL ARG SEQRES 9 A 247 MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL PHE SEQRES 10 A 247 PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG ALA SEQRES 11 A 247 LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP PHE SEQRES 12 A 247 SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP GLU SEQRES 13 A 247 ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA HIS SEQRES 14 A 247 ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN LEU SEQRES 15 A 247 GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU CYS SEQRES 16 A 247 LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO PRO SEQRES 17 A 247 LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL GLU SEQRES 18 A 247 ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL VAL SEQRES 19 A 247 GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SER SEQRES 1 B 247 GLY SER HIS MET ALA SER LEU THR GLU ILE GLU HIS LEU SEQRES 2 B 247 VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS GLN SEQRES 3 B 247 LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN ILE SEQRES 4 B 247 PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SER SEQRES 5 B 247 MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU THR SEQRES 6 B 247 GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG LEU SEQRES 7 B 247 SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE VAL SEQRES 8 B 247 LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL ARG SEQRES 9 B 247 MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL PHE SEQRES 10 B 247 PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG ALA SEQRES 11 B 247 LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP PHE SEQRES 12 B 247 SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP GLU SEQRES 13 B 247 ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA HIS SEQRES 14 B 247 ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN LEU SEQRES 15 B 247 GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU CYS SEQRES 16 B 247 LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO PRO SEQRES 17 B 247 LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL GLU SEQRES 18 B 247 ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL VAL SEQRES 19 B 247 GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SER SEQRES 1 C 247 GLY SER HIS MET ALA SER LEU THR GLU ILE GLU HIS LEU SEQRES 2 C 247 VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS GLN SEQRES 3 C 247 LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN ILE SEQRES 4 C 247 PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SER SEQRES 5 C 247 MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU THR SEQRES 6 C 247 GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG LEU SEQRES 7 C 247 SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE VAL SEQRES 8 C 247 LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL ARG SEQRES 9 C 247 MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL PHE SEQRES 10 C 247 PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG ALA SEQRES 11 C 247 LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP PHE SEQRES 12 C 247 SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP GLU SEQRES 13 C 247 ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA HIS SEQRES 14 C 247 ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN LEU SEQRES 15 C 247 GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU CYS SEQRES 16 C 247 LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO PRO SEQRES 17 C 247 LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL GLU SEQRES 18 C 247 ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL VAL SEQRES 19 C 247 GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SER SEQRES 1 D 247 GLY SER HIS MET ALA SER LEU THR GLU ILE GLU HIS LEU SEQRES 2 D 247 VAL GLN SER VAL CYS LYS SER TYR ARG GLU THR CYS GLN SEQRES 3 D 247 LEU ARG LEU GLU ASP LEU LEU ARG GLN ARG SER ASN ILE SEQRES 4 D 247 PHE SER ARG GLU GLU VAL THR GLY TYR GLN ARG LYS SER SEQRES 5 D 247 MET TRP GLU MET TRP GLU ARG CYS ALA HIS HIS LEU THR SEQRES 6 D 247 GLU ALA ILE GLN TYR VAL VAL GLU PHE ALA LYS ARG LEU SEQRES 7 D 247 SER GLY PHE MET GLU LEU CYS GLN ASN ASP GLN ILE VAL SEQRES 8 D 247 LEU LEU LYS ALA GLY ALA MET GLU VAL VAL LEU VAL ARG SEQRES 9 D 247 MET CYS ARG ALA TYR ASN ALA ASP ASN ARG THR VAL PHE SEQRES 10 D 247 PHE GLU GLY LYS TYR GLY GLY MET GLU LEU PHE ARG ALA SEQRES 11 D 247 LEU GLY CYS SER GLU LEU ILE SER SER ILE PHE ASP PHE SEQRES 12 D 247 SER HIS SER LEU SER ALA LEU HIS PHE SER GLU ASP GLU SEQRES 13 D 247 ILE ALA LEU TYR THR ALA LEU VAL LEU ILE ASN ALA HIS SEQRES 14 D 247 ARG PRO GLY LEU GLN GLU LYS ARG LYS VAL GLU GLN LEU SEQRES 15 D 247 GLN TYR ASN LEU GLU LEU ALA PHE HIS HIS HIS LEU CYS SEQRES 16 D 247 LYS THR HIS ARG GLN SER ILE LEU ALA LYS LEU PRO PRO SEQRES 17 D 247 LYS GLY LYS LEU ARG SER LEU CYS SER GLN HIS VAL GLU SEQRES 18 D 247 ARG LEU GLN ILE PHE GLN HIS LEU HIS PRO ILE VAL VAL SEQRES 19 D 247 GLN ALA ALA PHE PRO PRO LEU TYR LYS GLU LEU PHE SER HET 6Q6 A 600 32 HET 6Q6 B 600 32 HET 6Q6 C 600 32 HET 6Q6 D 600 32 HETNAM 6Q6 (3S)-3-(2H-1,3-BENZODIOXOL-5-YL)-1-[(3R,5S)-3,5- HETNAM 2 6Q6 DIMETHYLPIPERIDIN-1-YL]-3-(2-HYDROXY-4,6- HETNAM 3 6Q6 DIMETHOXYPHENYL)PROPAN-1-ONE FORMUL 5 6Q6 4(C25 H31 N O6) FORMUL 9 HOH *31(H2 O) HELIX 1 AA1 SER A 266 THR A 284 1 19 HELIX 2 AA2 ARG A 288 GLN A 295 1 8 HELIX 3 AA3 ARG A 296 ASN A 298 5 3 HELIX 4 AA4 SER A 301 LYS A 311 1 11 HELIX 5 AA5 SER A 312 ARG A 337 1 26 HELIX 6 AA6 CYS A 345 MET A 365 1 21 HELIX 7 AA7 GLY A 384 GLY A 392 5 9 HELIX 8 AA8 CYS A 393 ALA A 409 1 17 HELIX 9 AA9 SER A 413 LEU A 425 1 13 HELIX 10 AB1 GLU A 435 LYS A 456 1 22 HELIX 11 AB2 SER A 461 LEU A 466 1 6 HELIX 12 AB3 GLY A 470 ILE A 485 1 16 HELIX 13 AB4 SER B 266 CYS B 285 1 20 HELIX 14 AB5 ARG B 288 GLN B 295 1 8 HELIX 15 AB6 GLU B 303 LYS B 311 1 9 HELIX 16 AB7 SER B 312 LEU B 338 1 27 HELIX 17 AB8 CYS B 345 MET B 365 1 21 HELIX 18 AB9 GLY B 384 GLY B 392 5 9 HELIX 19 AC1 CYS B 393 SER B 406 1 14 HELIX 20 AC2 SER B 413 ILE B 426 1 14 HELIX 21 AC3 LYS B 436 THR B 457 1 22 HELIX 22 AC4 ARG B 459 LYS B 465 5 7 HELIX 23 AC5 LEU B 472 VAL B 480 1 9 HELIX 24 AC6 SER C 266 THR C 284 1 19 HELIX 25 AC7 ARG C 288 GLN C 295 1 8 HELIX 26 AC8 ARG C 296 ASN C 298 5 3 HELIX 27 AC9 SER C 301 LYS C 311 1 11 HELIX 28 AD1 SER C 312 ARG C 337 1 26 HELIX 29 AD2 ASN C 347 MET C 365 1 19 HELIX 30 AD3 PHE C 388 GLY C 392 5 5 HELIX 31 AD4 CYS C 393 ALA C 409 1 17 HELIX 32 AD5 SER C 413 LEU C 425 1 13 HELIX 33 AD6 GLU C 435 LYS C 456 1 22 HELIX 34 AD7 SER C 461 LEU C 466 1 6 HELIX 35 AD8 GLY C 470 ILE C 485 1 16 HELIX 36 AD9 SER D 266 THR D 284 1 19 HELIX 37 AE1 ARG D 288 GLN D 295 1 8 HELIX 38 AE2 ARG D 296 ASN D 298 5 3 HELIX 39 AE3 GLU D 303 LYS D 311 1 9 HELIX 40 AE4 SER D 312 LEU D 338 1 27 HELIX 41 AE5 ASN D 347 ALA D 357 1 11 HELIX 42 AE6 ALA D 357 MET D 365 1 9 HELIX 43 AE7 MET D 385 GLY D 392 5 8 HELIX 44 AE8 CYS D 393 ALA D 409 1 17 HELIX 45 AE9 SER D 413 ILE D 426 1 14 HELIX 46 AF1 LYS D 436 THR D 457 1 22 HELIX 47 AF2 ARG D 459 LYS D 465 5 7 HELIX 48 AF3 LEU D 472 VAL D 480 1 9 HELIX 49 AF4 GLU D 481 LEU D 483 5 3 SHEET 1 AA1 3 TYR A 369 ASN A 370 0 SHEET 2 AA1 3 THR A 375 PHE A 378 -1 O THR A 375 N ASN A 370 SHEET 3 AA1 3 LYS A 381 GLY A 383 -1 O GLY A 383 N VAL A 376 SHEET 1 AA2 3 TYR B 369 ASN B 370 0 SHEET 2 AA2 3 THR B 375 PHE B 378 -1 O THR B 375 N ASN B 370 SHEET 3 AA2 3 LYS B 381 GLY B 383 -1 O GLY B 383 N VAL B 376 SHEET 1 AA3 3 TYR C 369 ASN C 370 0 SHEET 2 AA3 3 THR C 375 PHE C 378 -1 O THR C 375 N ASN C 370 SHEET 3 AA3 3 LYS C 381 GLY C 383 -1 O GLY C 383 N VAL C 376 SHEET 1 AA4 3 TYR D 369 ASN D 370 0 SHEET 2 AA4 3 THR D 375 PHE D 378 -1 O THR D 375 N ASN D 370 SHEET 3 AA4 3 LYS D 381 GLY D 383 -1 O GLY D 383 N VAL D 376 SITE 1 AC1 8 GLN A 286 HIS A 323 ALA A 327 LEU A 362 SITE 2 AC1 8 MET A 365 PHE A 388 ILE A 400 HIS A 479 SITE 1 AC2 10 GLN B 286 HIS B 323 LEU B 324 LEU B 362 SITE 2 AC2 10 MET B 365 VAL B 376 PHE B 378 PHE B 388 SITE 3 AC2 10 ILE B 400 HIS B 479 SITE 1 AC3 8 GLN C 286 HIS C 323 ALA C 327 LEU C 362 SITE 2 AC3 8 MET C 365 PHE C 388 ILE C 400 HIS C 479 SITE 1 AC4 8 GLN D 286 HIS D 323 LEU D 324 LEU D 362 SITE 2 AC4 8 MET D 365 PHE D 378 PHE D 388 HIS D 479 CRYST1 89.467 89.467 153.731 90.00 90.00 120.00 P 31 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011177 0.006453 0.000000 0.00000 SCALE2 0.000000 0.012906 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006505 0.00000