data_5K5F # _entry.id 5K5F # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5K5F pdb_00005k5f 10.2210/pdb5k5f/pdb WWPDB D_1000221791 ? ? BMRB 30098 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2016-06-08 _pdbx_database_PDB_obs_spr.pdb_id 5K5F _pdbx_database_PDB_obs_spr.replace_pdb_id 2L1I _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 2MZN unspecified BMRB . 30098 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5K5F _pdbx_database_status.recvd_initial_deposition_date 2016-05-23 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bezsonova, I.' 1 'Neculai, D.' 2 'Korzhnev, D.' 3 'Weigelt, J.' 4 'Bountra, C.' 5 'Edwards, A.' 6 'Arrowsmith, C.' 7 'Dhe-Paganon, S.' 8 'Structural Genomics Consortium (SGC)' 9 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'NMR structure of the HLTF HIRAN domain' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bezsonova, I.' 1 ? primary 'Neculai, D.' 2 ? primary 'Korzhnev, D.' 3 ? primary 'Arrowsmith, C.' 4 ? primary 'Dhe-Paganon, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Helicase-like transcription factor' _entity.formula_weight 13532.326 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 3.6.4.-,6.3.2.- _entity.pdbx_mutation ? _entity.pdbx_fragment 'residues 51-171' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;DNA-binding protein/plasminogen activator inhibitor 1 regulator,HIP116,RING finger protein 80,SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3,Sucrose nonfermenting protein 2-like 3 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNKLAQ IEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKL ; _entity_poly.pdbx_seq_one_letter_code_can ;GSDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNKLAQ IEGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ASP n 1 4 GLU n 1 5 GLU n 1 6 VAL n 1 7 ASP n 1 8 SER n 1 9 VAL n 1 10 LEU n 1 11 PHE n 1 12 GLY n 1 13 SER n 1 14 LEU n 1 15 ARG n 1 16 GLY n 1 17 HIS n 1 18 VAL n 1 19 VAL n 1 20 GLY n 1 21 LEU n 1 22 ARG n 1 23 TYR n 1 24 TYR n 1 25 THR n 1 26 GLY n 1 27 VAL n 1 28 VAL n 1 29 ASN n 1 30 ASN n 1 31 ASN n 1 32 GLU n 1 33 MET n 1 34 VAL n 1 35 ALA n 1 36 LEU n 1 37 GLN n 1 38 ARG n 1 39 ASP n 1 40 PRO n 1 41 ASN n 1 42 ASN n 1 43 PRO n 1 44 TYR n 1 45 ASP n 1 46 LYS n 1 47 ASN n 1 48 ALA n 1 49 ILE n 1 50 LYS n 1 51 VAL n 1 52 ASN n 1 53 ASN n 1 54 VAL n 1 55 ASN n 1 56 GLY n 1 57 ASN n 1 58 GLN n 1 59 VAL n 1 60 GLY n 1 61 HIS n 1 62 LEU n 1 63 LYS n 1 64 LYS n 1 65 GLU n 1 66 LEU n 1 67 ALA n 1 68 GLY n 1 69 ALA n 1 70 LEU n 1 71 ALA n 1 72 TYR n 1 73 ILE n 1 74 MET n 1 75 ASP n 1 76 ASN n 1 77 LYS n 1 78 LEU n 1 79 ALA n 1 80 GLN n 1 81 ILE n 1 82 GLU n 1 83 GLY n 1 84 VAL n 1 85 VAL n 1 86 PRO n 1 87 PHE n 1 88 GLY n 1 89 ALA n 1 90 ASN n 1 91 ASN n 1 92 ALA n 1 93 PHE n 1 94 THR n 1 95 MET n 1 96 PRO n 1 97 LEU n 1 98 HIS n 1 99 MET n 1 100 THR n 1 101 PHE n 1 102 TRP n 1 103 GLY n 1 104 LYS n 1 105 GLU n 1 106 GLU n 1 107 ASN n 1 108 ARG n 1 109 LYS n 1 110 ALA n 1 111 VAL n 1 112 SER n 1 113 ASP n 1 114 GLN n 1 115 LEU n 1 116 LYS n 1 117 LYS n 1 118 HIS n 1 119 GLY n 1 120 PHE n 1 121 LYS n 1 122 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 122 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'HLTF, HIP116A, RNF80, SMARCA3, SNF2L3, ZBU1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HLTF_HUMAN _struct_ref.pdbx_db_accession Q14527 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SDEEVDSVLFGSLRGHVVGLRYYTGVVNNNEMVALQRDPNNPYDKNAIKVNNVNGNQVGHLKKELAGALAYIMDNKLAQI EGVVPFGANNAFTMPLHMTFWGKEENRKAVSDQLKKHGFKL ; _struct_ref.pdbx_align_begin 51 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5K5F _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 122 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q14527 _struct_ref_seq.db_align_beg 51 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 171 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 51 _struct_ref_seq.pdbx_auth_seq_align_end 171 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 5K5F _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q14527 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 50 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-15N HSQC' 1 isotropic 2 1 1 '2D 1H-13C HSQC aliphatic' 1 isotropic 3 1 1 '3D HNCO' 1 isotropic 4 1 1 '3D HNCA' 1 isotropic 5 1 1 '3D HN(CO)CA' 1 isotropic 9 1 1 '3D HCCH-TOCSY' 1 isotropic 8 1 1 '3D CCH-TOCSY' 1 isotropic 7 1 1 '3D 1H-15N NOESY' 1 isotropic 6 1 1 '3D 1H-13C NOESY' 1 isotropic 11 1 1 '3D 1H-13C NOESY aromatic' 1 isotropic 10 1 1 '3D CBCA(CO)NH' 1 isotropic 12 1 1 '3D HBHA(CO)NH' 1 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.1 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units M _pdbx_nmr_exptl_sample_conditions.label 'condition 1' _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1 mM [U-99% 13C; U-99% 15N] HLTF HIRAN domain, 20 mM sodium phosphate, 100 mM sodium chloride, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 15N_13C_sample _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model VNMRS _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Agilent _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.details ? # _pdbx_nmr_refine.entry_id 5K5F _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details 'water refinement' _pdbx_nmr_refine.software_ordinal 2 # _pdbx_nmr_ensemble.entry_id 5K5F _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5K5F _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 collection VNMR ? Varian 9 processing NMRPipe ? 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' 4 'peak picking' Sparky ? Goddard 3 'chemical shift assignment' Sparky ? Goddard 8 'data analysis' TALOS ? 'Cornilescu, Delaglio and Bax' 7 'data analysis' ABACUS ? 'Lemak and Arrowsmith' 2 refinement CYANA ? 'Guntert, Mumenthaler and Wuthrich' 6 'structure calculation' CNS ? 'Brunger, Adams, Clore, Gros, Nilges and Read' # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5K5F _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5K5F _struct.title 'NMR structure of the HLTF HIRAN domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5K5F _struct_keywords.text ;DNA-binding, DNA replication, Structural Genomics, PSI-Biology, Protein Structure Initiative, Structural Genomics Consortium, SGC, DNA BINDING PROTEIN ; _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 2 ? ASP A 7 ? SER A 51 ASP A 56 1 ? 6 HELX_P HELX_P2 AA2 GLY A 20 ? GLY A 26 ? GLY A 69 GLY A 75 5 ? 7 HELX_P HELX_P3 AA3 LYS A 63 ? ASN A 76 ? LYS A 112 ASN A 125 1 ? 14 HELX_P HELX_P4 AA4 ASN A 107 ? GLY A 119 ? ASN A 156 GLY A 168 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 SER A 8 ? VAL A 18 ? SER A 57 VAL A 67 AA1 2 MET A 95 ? LYS A 104 ? MET A 144 LYS A 153 AA1 3 GLN A 80 ? VAL A 85 ? GLN A 129 VAL A 134 AA1 4 GLU A 32 ? ARG A 38 ? GLU A 81 ARG A 87 AA1 5 ILE A 49 ? ASN A 53 ? ILE A 98 ASN A 102 AA1 6 GLN A 58 ? HIS A 61 ? GLN A 107 HIS A 110 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 9 ? N VAL A 58 O GLY A 103 ? O GLY A 152 AA1 2 3 O TRP A 102 ? O TRP A 151 N GLN A 80 ? N GLN A 129 AA1 3 4 O VAL A 85 ? O VAL A 134 N GLU A 32 ? N GLU A 81 AA1 4 5 N GLN A 37 ? N GLN A 86 O LYS A 50 ? O LYS A 99 AA1 5 6 N VAL A 51 ? N VAL A 100 O GLY A 60 ? O GLY A 109 # _atom_sites.entry_id 5K5F _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 50 50 GLY GLY A . n A 1 2 SER 2 51 51 SER SER A . n A 1 3 ASP 3 52 52 ASP ASP A . n A 1 4 GLU 4 53 53 GLU GLU A . n A 1 5 GLU 5 54 54 GLU GLU A . n A 1 6 VAL 6 55 55 VAL VAL A . n A 1 7 ASP 7 56 56 ASP ASP A . n A 1 8 SER 8 57 57 SER SER A . n A 1 9 VAL 9 58 58 VAL VAL A . n A 1 10 LEU 10 59 59 LEU LEU A . n A 1 11 PHE 11 60 60 PHE PHE A . n A 1 12 GLY 12 61 61 GLY GLY A . n A 1 13 SER 13 62 62 SER SER A . n A 1 14 LEU 14 63 63 LEU LEU A . n A 1 15 ARG 15 64 64 ARG ARG A . n A 1 16 GLY 16 65 65 GLY GLY A . n A 1 17 HIS 17 66 66 HIS HIS A . n A 1 18 VAL 18 67 67 VAL VAL A . n A 1 19 VAL 19 68 68 VAL VAL A . n A 1 20 GLY 20 69 69 GLY GLY A . n A 1 21 LEU 21 70 70 LEU LEU A . n A 1 22 ARG 22 71 71 ARG ARG A . n A 1 23 TYR 23 72 72 TYR TYR A . n A 1 24 TYR 24 73 73 TYR TYR A . n A 1 25 THR 25 74 74 THR THR A . n A 1 26 GLY 26 75 75 GLY GLY A . n A 1 27 VAL 27 76 76 VAL VAL A . n A 1 28 VAL 28 77 77 VAL VAL A . n A 1 29 ASN 29 78 78 ASN ASN A . n A 1 30 ASN 30 79 79 ASN ASN A . n A 1 31 ASN 31 80 80 ASN ASN A . n A 1 32 GLU 32 81 81 GLU GLU A . n A 1 33 MET 33 82 82 MET MET A . n A 1 34 VAL 34 83 83 VAL VAL A . n A 1 35 ALA 35 84 84 ALA ALA A . n A 1 36 LEU 36 85 85 LEU LEU A . n A 1 37 GLN 37 86 86 GLN GLN A . n A 1 38 ARG 38 87 87 ARG ARG A . n A 1 39 ASP 39 88 88 ASP ASP A . n A 1 40 PRO 40 89 89 PRO PRO A . n A 1 41 ASN 41 90 90 ASN ASN A . n A 1 42 ASN 42 91 91 ASN ASN A . n A 1 43 PRO 43 92 92 PRO PRO A . n A 1 44 TYR 44 93 93 TYR TYR A . n A 1 45 ASP 45 94 94 ASP ASP A . n A 1 46 LYS 46 95 95 LYS LYS A . n A 1 47 ASN 47 96 96 ASN ASN A . n A 1 48 ALA 48 97 97 ALA ALA A . n A 1 49 ILE 49 98 98 ILE ILE A . n A 1 50 LYS 50 99 99 LYS LYS A . n A 1 51 VAL 51 100 100 VAL VAL A . n A 1 52 ASN 52 101 101 ASN ASN A . n A 1 53 ASN 53 102 102 ASN ASN A . n A 1 54 VAL 54 103 103 VAL VAL A . n A 1 55 ASN 55 104 104 ASN ASN A . n A 1 56 GLY 56 105 105 GLY GLY A . n A 1 57 ASN 57 106 106 ASN ASN A . n A 1 58 GLN 58 107 107 GLN GLN A . n A 1 59 VAL 59 108 108 VAL VAL A . n A 1 60 GLY 60 109 109 GLY GLY A . n A 1 61 HIS 61 110 110 HIS HIS A . n A 1 62 LEU 62 111 111 LEU LEU A . n A 1 63 LYS 63 112 112 LYS LYS A . n A 1 64 LYS 64 113 113 LYS LYS A . n A 1 65 GLU 65 114 114 GLU GLU A . n A 1 66 LEU 66 115 115 LEU LEU A . n A 1 67 ALA 67 116 116 ALA ALA A . n A 1 68 GLY 68 117 117 GLY GLY A . n A 1 69 ALA 69 118 118 ALA ALA A . n A 1 70 LEU 70 119 119 LEU LEU A . n A 1 71 ALA 71 120 120 ALA ALA A . n A 1 72 TYR 72 121 121 TYR TYR A . n A 1 73 ILE 73 122 122 ILE ILE A . n A 1 74 MET 74 123 123 MET MET A . n A 1 75 ASP 75 124 124 ASP ASP A . n A 1 76 ASN 76 125 125 ASN ASN A . n A 1 77 LYS 77 126 126 LYS LYS A . n A 1 78 LEU 78 127 127 LEU LEU A . n A 1 79 ALA 79 128 128 ALA ALA A . n A 1 80 GLN 80 129 129 GLN GLN A . n A 1 81 ILE 81 130 130 ILE ILE A . n A 1 82 GLU 82 131 131 GLU GLU A . n A 1 83 GLY 83 132 132 GLY GLY A . n A 1 84 VAL 84 133 133 VAL VAL A . n A 1 85 VAL 85 134 134 VAL VAL A . n A 1 86 PRO 86 135 135 PRO PRO A . n A 1 87 PHE 87 136 136 PHE PHE A . n A 1 88 GLY 88 137 137 GLY GLY A . n A 1 89 ALA 89 138 138 ALA ALA A . n A 1 90 ASN 90 139 139 ASN ASN A . n A 1 91 ASN 91 140 140 ASN ASN A . n A 1 92 ALA 92 141 141 ALA ALA A . n A 1 93 PHE 93 142 142 PHE PHE A . n A 1 94 THR 94 143 143 THR THR A . n A 1 95 MET 95 144 144 MET MET A . n A 1 96 PRO 96 145 145 PRO PRO A . n A 1 97 LEU 97 146 146 LEU LEU A . n A 1 98 HIS 98 147 147 HIS HIS A . n A 1 99 MET 99 148 148 MET MET A . n A 1 100 THR 100 149 149 THR THR A . n A 1 101 PHE 101 150 150 PHE PHE A . n A 1 102 TRP 102 151 151 TRP TRP A . n A 1 103 GLY 103 152 152 GLY GLY A . n A 1 104 LYS 104 153 153 LYS LYS A . n A 1 105 GLU 105 154 154 GLU GLU A . n A 1 106 GLU 106 155 155 GLU GLU A . n A 1 107 ASN 107 156 156 ASN ASN A . n A 1 108 ARG 108 157 157 ARG ARG A . n A 1 109 LYS 109 158 158 LYS LYS A . n A 1 110 ALA 110 159 159 ALA ALA A . n A 1 111 VAL 111 160 160 VAL VAL A . n A 1 112 SER 112 161 161 SER SER A . n A 1 113 ASP 113 162 162 ASP ASP A . n A 1 114 GLN 114 163 163 GLN GLN A . n A 1 115 LEU 115 164 164 LEU LEU A . n A 1 116 LYS 116 165 165 LYS LYS A . n A 1 117 LYS 117 166 166 LYS LYS A . n A 1 118 HIS 118 167 167 HIS HIS A . n A 1 119 GLY 119 168 168 GLY GLY A . n A 1 120 PHE 120 169 169 PHE PHE A . n A 1 121 LYS 121 170 170 LYS LYS A . n A 1 122 LEU 122 171 171 LEU LEU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-06-08 2 'Structure model' 1 1 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' Other 4 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' database_2 2 2 'Structure model' entity 3 2 'Structure model' pdbx_database_status 4 2 'Structure model' pdbx_nmr_software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_entity.pdbx_number_of_molecules' 4 2 'Structure model' '_pdbx_database_status.status_code_nmr_data' 5 2 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'HLTF HIRAN domain' 1 ? mM '[U-99% 13C; U-99% 15N]' 1 'sodium phosphate' 20 ? mM 'natural abundance' 1 'sodium chloride' 100 ? mM 'natural abundance' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 94 ? ? 172.10 162.20 2 1 GLN A 107 ? ? -65.17 99.67 3 1 LYS A 112 ? ? 150.85 133.81 4 1 PHE A 142 ? ? -151.34 -77.86 5 2 ASN A 90 ? ? -98.75 33.95 6 2 ASN A 102 ? ? -75.71 -168.92 7 2 LYS A 112 ? ? 170.72 166.49 8 3 SER A 51 ? ? -85.12 36.33 9 3 HIS A 66 ? ? -68.08 87.64 10 3 ASN A 78 ? ? -109.68 -146.26 11 3 ASN A 80 ? ? 68.83 -5.44 12 3 ASN A 90 ? ? -167.38 106.95 13 3 GLN A 107 ? ? -69.78 95.37 14 3 LYS A 112 ? ? 152.12 121.83 15 4 TYR A 93 ? ? -128.61 -50.72 16 4 LYS A 112 ? ? 172.01 168.77 17 4 PHE A 142 ? ? -141.50 -83.49 18 5 VAL A 76 ? ? -42.19 158.28 19 5 ASN A 78 ? ? -72.75 -76.84 20 5 ASN A 80 ? ? 70.70 -7.60 21 5 TYR A 93 ? ? -120.84 -53.38 22 5 ASN A 102 ? ? -107.10 -165.60 23 5 GLN A 107 ? ? -61.64 92.45 24 5 LYS A 112 ? ? -178.47 -179.32 25 6 VAL A 76 ? ? -41.45 169.31 26 6 ASN A 78 ? ? -75.15 -166.70 27 6 ASP A 94 ? ? 177.74 157.04 28 6 ASN A 102 ? ? -107.51 -169.95 29 6 LYS A 112 ? ? 64.08 -156.44 30 7 ARG A 71 ? ? -56.88 -6.63 31 7 VAL A 76 ? ? -52.84 171.51 32 7 ASN A 90 ? ? -91.70 47.73 33 7 HIS A 110 ? ? -161.34 113.62 34 7 LYS A 112 ? ? 70.71 149.18 35 8 VAL A 76 ? ? -40.46 155.80 36 8 LYS A 112 ? ? 162.54 126.96 37 8 ALA A 141 ? ? -92.17 -64.35 38 9 ASN A 78 ? ? -104.83 -166.78 39 9 ASN A 80 ? ? 77.17 -18.54 40 9 TYR A 93 ? ? -120.52 -56.08 41 9 LYS A 112 ? ? 69.63 129.68 42 10 TYR A 93 ? ? -126.30 -52.79 43 10 LYS A 112 ? ? 68.74 141.86 44 10 ALA A 141 ? ? -97.80 -60.90 45 10 LYS A 170 ? ? -172.81 138.56 46 11 VAL A 76 ? ? -40.90 164.16 47 11 ASN A 78 ? ? -70.38 -79.27 48 11 LYS A 112 ? ? 147.31 143.29 49 12 VAL A 76 ? ? -43.71 165.83 50 12 ASN A 78 ? ? -94.91 -82.05 51 12 ASP A 94 ? ? 177.98 156.77 52 12 LYS A 112 ? ? 67.74 -176.88 53 12 LYS A 170 ? ? -172.30 147.53 54 13 VAL A 76 ? ? -44.42 156.54 55 13 ASN A 80 ? ? 67.57 -0.57 56 13 GLN A 107 ? ? -59.85 105.15 57 13 LYS A 112 ? ? 156.65 145.33 58 14 ASN A 78 ? ? -97.17 -97.14 59 14 ASN A 80 ? ? 59.19 10.39 60 14 ASN A 90 ? ? -93.68 59.02 61 14 LYS A 112 ? ? 158.21 127.87 62 15 VAL A 76 ? ? -59.79 170.34 63 15 ASP A 94 ? ? -173.09 138.27 64 15 ALA A 97 ? ? -59.77 109.14 65 15 ASN A 102 ? ? -105.67 -167.87 66 15 LYS A 112 ? ? 173.98 169.55 67 16 ASN A 78 ? ? -96.02 -115.90 68 16 ASN A 80 ? ? 74.03 -22.50 69 16 ASN A 90 ? ? -90.33 52.49 70 16 ASN A 91 ? ? -54.25 108.16 71 16 ASN A 102 ? ? -108.40 -165.77 72 16 LYS A 112 ? ? 71.60 151.50 73 17 VAL A 76 ? ? -48.91 152.55 74 17 TYR A 93 ? ? -127.35 -50.97 75 17 LYS A 112 ? ? 71.45 130.56 76 17 PHE A 142 ? ? -167.99 -66.30 77 18 HIS A 66 ? ? -65.62 85.82 78 18 ASN A 78 ? ? -78.91 -164.64 79 18 ASN A 80 ? ? 73.72 -15.52 80 18 ASN A 90 ? ? -107.27 68.44 81 18 GLN A 107 ? ? -58.92 104.76 82 18 LYS A 112 ? ? 142.53 117.09 83 19 ASN A 78 ? ? -89.96 -87.49 84 19 ASN A 102 ? ? -77.31 -169.69 85 19 LYS A 112 ? ? 65.09 -172.10 86 19 PHE A 142 ? ? 171.75 -89.92 87 20 ASN A 79 ? ? -68.14 69.29 88 20 ASN A 80 ? ? -178.89 -47.01 89 20 ASP A 94 ? ? 170.78 163.91 90 20 ASN A 102 ? ? -110.54 -167.90 91 20 LYS A 112 ? ? 69.15 146.30 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Connecticut Innovations' 'United States' 13-SCA-UCHC-03 1 'Connecticut Department of Public Health' 'United States' 2013-0203 2 #