HEADER TRANSFERASE 25-MAY-16 5K6R TITLE CRYSTAL STRUCTURE OF ARABIDOPSIS THALIANA ACETOHYDROXYACID SYNTHASE IN TITLE 2 COMPLEX WITH A SULFONYLAMINO-CARBONYL-TRIAZOLINONE HERBICIDE, TITLE 3 THIENCARBAZONE-METHYL COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETOLACTATE SYNTHASE, CHLOROPLASTIC; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 86-667; COMPND 5 SYNONYM: ATALS,ACETOHYDROXY-ACID SYNTHASE,PROTEIN CHLORSULFURON COMPND 6 RESISTANT 1; COMPND 7 EC: 2.2.1.6; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: MOUSE-EAR CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: ALS, AHAS, CSR1, TZP5, AT3G48560, T8P19.70, ILVB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET30A(+) KEYWDS AHAS, ACETOHYDROXYACID SYNTHASE, ACETOLACTATE SYNTHASE, HERBICIDE, KEYWDS 2 THIENCARBAZONE METHYL, THIAMIN DIPHOSPHATE, FAD, SULFONYLAMINO- KEYWDS 3 CARBONYL-TRIAZOLINONE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.D.GARCIA,T.LONHIENNE,L.W.GUDDAT REVDAT 5 27-SEP-23 5K6R 1 LINK REVDAT 4 08-JAN-20 5K6R 1 REMARK REVDAT 3 27-SEP-17 5K6R 1 REMARK REVDAT 2 01-MAR-17 5K6R 1 JRNL REVDAT 1 08-FEB-17 5K6R 0 JRNL AUTH M.D.GARCIA,A.NOUWENS,T.G.LONHIENNE,L.W.GUDDAT JRNL TITL COMPREHENSIVE UNDERSTANDING OF ACETOHYDROXYACID SYNTHASE JRNL TITL 2 INHIBITION BY DIFFERENT HERBICIDE FAMILIES. JRNL REF PROC. NATL. ACAD. SCI. V. 114 E1091 2017 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 28137884 JRNL DOI 10.1073/PNAS.1616142114 REMARK 2 REMARK 2 RESOLUTION. 2.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 47539 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.6758 - 6.5825 0.99 3523 155 0.1281 0.1431 REMARK 3 2 6.5825 - 5.2274 1.00 3357 147 0.1259 0.1691 REMARK 3 3 5.2274 - 4.5673 1.00 3305 145 0.1068 0.1544 REMARK 3 4 4.5673 - 4.1501 1.00 3279 145 0.1133 0.1484 REMARK 3 5 4.1501 - 3.8528 1.00 3266 143 0.1227 0.1509 REMARK 3 6 3.8528 - 3.6257 1.00 3238 142 0.1363 0.1868 REMARK 3 7 3.6257 - 3.4442 1.00 3252 143 0.1543 0.1834 REMARK 3 8 3.4442 - 3.2943 1.00 3225 141 0.1774 0.2092 REMARK 3 9 3.2943 - 3.1676 1.00 3217 141 0.1849 0.2169 REMARK 3 10 3.1676 - 3.0583 1.00 3213 141 0.1871 0.1966 REMARK 3 11 3.0583 - 2.9627 1.00 3216 141 0.1899 0.1983 REMARK 3 12 2.9627 - 2.8780 1.00 3214 142 0.2089 0.2695 REMARK 3 13 2.8780 - 2.8023 1.00 3217 140 0.2235 0.2692 REMARK 3 14 2.8023 - 2.7339 0.95 3019 132 0.2421 0.2667 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.080 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4692 REMARK 3 ANGLE : 0.683 6392 REMARK 3 CHIRALITY : 0.026 703 REMARK 3 PLANARITY : 0.003 830 REMARK 3 DIHEDRAL : 13.804 1729 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 63.7106 -62.8677 -13.1144 REMARK 3 T TENSOR REMARK 3 T11: 0.2844 T22: 0.3817 REMARK 3 T33: 0.3285 T12: -0.0594 REMARK 3 T13: -0.0405 T23: -0.0385 REMARK 3 L TENSOR REMARK 3 L11: 1.4824 L22: 0.8909 REMARK 3 L33: 1.5347 L12: 0.1384 REMARK 3 L13: 0.1858 L23: -0.2832 REMARK 3 S TENSOR REMARK 3 S11: 0.0033 S12: -0.3694 S13: 0.0450 REMARK 3 S21: 0.2091 S22: -0.0545 S23: -0.0366 REMARK 3 S31: -0.1023 S32: 0.0991 S33: 0.0452 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5K6R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1000221649. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95370 REMARK 200 MONOCHROMATOR : SI(III) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47622 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.730 REMARK 200 RESOLUTION RANGE LOW (A) : 48.630 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 21.20 REMARK 200 R MERGE (I) : 0.19500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.1 REMARK 200 DATA REDUNDANCY IN SHELL : 19.70 REMARK 200 R MERGE FOR SHELL (I) : 0.79000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1YHY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 81.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 6.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NA/K TARTRATE, CHES, AMMONIUM SULFATE, REMARK 280 FAD, THIAMIN DIPHOSPHATE, MGCL2, DTT, THIENCARBAZONE-ETHYL, PH REMARK 280 9.8, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 64 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+1/3 REMARK 290 6555 X-Y,X,Z+2/3 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+1/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.15567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 124.31133 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 62.15567 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 124.31133 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 62.15567 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 124.31133 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 62.15567 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 124.31133 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 90.18200 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 -156.19981 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 -62.15567 REMARK 350 BIOMT1 4 0.500000 0.866025 0.000000 90.18200 REMARK 350 BIOMT2 4 0.866025 -0.500000 0.000000 -156.19981 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 -62.15567 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -97.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 90.18200 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -156.19981 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -62.15567 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 K K A 705 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 811 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 836 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 911 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 918 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 947 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1081 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1151 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 668 REMARK 465 GLU A 669 REMARK 465 HIS A 670 REMARK 465 HIS A 671 REMARK 465 HIS A 672 REMARK 465 HIS A 673 REMARK 465 HIS A 674 REMARK 465 HIS A 675 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 424 CG CD CE NZ REMARK 470 LYS A 434 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O4' FAD A 702 O HOH A 801 2.14 REMARK 500 OD1 ASP A 376 O HOH A 802 2.15 REMARK 500 OD2 ASP A 185 O HOH A 803 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 158 -32.89 -136.41 REMARK 500 PRO A 210 70.32 -69.89 REMARK 500 HIS A 347 -151.40 60.24 REMARK 500 LYS A 434 66.72 -117.21 REMARK 500 PHE A 437 35.79 -99.78 REMARK 500 PRO A 557 43.62 -77.60 REMARK 500 ASP A 665 -141.47 -147.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1186 DISTANCE = 5.82 ANGSTROMS REMARK 525 HOH A1187 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A1188 DISTANCE = 6.18 ANGSTROMS REMARK 525 HOH A1189 DISTANCE = 6.70 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 701 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 538 OD1 REMARK 620 2 ASN A 565 OD1 94.9 REMARK 620 3 HIS A 567 O 104.6 85.5 REMARK 620 4 TZD A 706 O13 89.5 175.6 93.3 REMARK 620 5 TZD A 706 O22 159.6 97.8 92.3 77.9 REMARK 620 6 HOH A 907 O 83.8 86.3 168.7 94.3 81.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 705 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 543 O REMARK 620 2 MET A 543 O 0.0 REMARK 620 3 GLN A 546 OE1 89.4 89.4 REMARK 620 4 GLN A 546 OE1 89.4 89.4 0.0 REMARK 620 5 HOH A 882 O 74.3 74.3 105.5 105.5 REMARK 620 6 HOH A 882 O 105.1 105.1 140.3 140.3 47.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6R5 A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NHE A 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue TZD A 706 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5K6T RELATED DB: PDB REMARK 900 RELATED ID: 5K6Q RELATED DB: PDB REMARK 900 RELATED ID: 5K2O RELATED DB: PDB REMARK 900 RELATED ID: 5K3S RELATED DB: PDB DBREF 5K6R A 86 667 UNP P17597 ILVB_ARATH 86 667 SEQADV 5K6R LEU A 668 UNP P17597 EXPRESSION TAG SEQADV 5K6R GLU A 669 UNP P17597 EXPRESSION TAG SEQADV 5K6R HIS A 670 UNP P17597 EXPRESSION TAG SEQADV 5K6R HIS A 671 UNP P17597 EXPRESSION TAG SEQADV 5K6R HIS A 672 UNP P17597 EXPRESSION TAG SEQADV 5K6R HIS A 673 UNP P17597 EXPRESSION TAG SEQADV 5K6R HIS A 674 UNP P17597 EXPRESSION TAG SEQADV 5K6R HIS A 675 UNP P17597 EXPRESSION TAG SEQRES 1 A 590 THR PHE ILE SER ARG PHE ALA PRO ASP GLN PRO ARG LYS SEQRES 2 A 590 GLY ALA ASP ILE LEU VAL GLU ALA LEU GLU ARG GLN GLY SEQRES 3 A 590 VAL GLU THR VAL PHE ALA TYR PRO GLY GLY ALA SER MET SEQRES 4 A 590 GLU ILE HIS GLN ALA LEU THR ARG SER SER SER ILE ARG SEQRES 5 A 590 ASN VAL LEU PRO ARG HIS GLU GLN GLY GLY VAL PHE ALA SEQRES 6 A 590 ALA GLU GLY TYR ALA ARG SER SER GLY LYS PRO GLY ILE SEQRES 7 A 590 CYS ILE ALA THR SER GLY PRO GLY ALA THR ASN LEU VAL SEQRES 8 A 590 SER GLY LEU ALA ASP ALA LEU LEU ASP SER VAL PRO LEU SEQRES 9 A 590 VAL ALA ILE THR GLY GLN VAL PRO ARG ARG MET ILE GLY SEQRES 10 A 590 THR ASP ALA PHE GLN GLU THR PRO ILE VAL GLU VAL THR SEQRES 11 A 590 ARG SER ILE THR LYS HIS ASN TYR LEU VAL MET ASP VAL SEQRES 12 A 590 GLU ASP ILE PRO ARG ILE ILE GLU GLU ALA PHE PHE LEU SEQRES 13 A 590 ALA THR SER GLY ARG PRO GLY PRO VAL LEU VAL ASP VAL SEQRES 14 A 590 PRO LYS ASP ILE GLN GLN GLN LEU ALA ILE PRO ASN TRP SEQRES 15 A 590 GLU GLN ALA MET ARG LEU PRO GLY TYR MET SER ARG MET SEQRES 16 A 590 PRO LYS PRO PRO GLU ASP SER HIS LEU GLU GLN ILE VAL SEQRES 17 A 590 ARG LEU ILE SER GLU SER LYS LYS PRO VAL LEU TYR VAL SEQRES 18 A 590 GLY GLY GLY CYS LEU ASN SER SER ASP GLU LEU GLY ARG SEQRES 19 A 590 PHE VAL GLU LEU THR GLY ILE PRO VAL ALA SER THR LEU SEQRES 20 A 590 MET GLY LEU GLY SER TYR PRO CSD ASP ASP GLU LEU SER SEQRES 21 A 590 LEU HIS MET LEU GLY MET HIS GLY THR VAL TYR ALA ASN SEQRES 22 A 590 TYR ALA VAL GLU HIS SER ASP LEU LEU LEU ALA PHE GLY SEQRES 23 A 590 VAL ARG PHE ASP ASP ARG VAL THR GLY LYS LEU GLU ALA SEQRES 24 A 590 PHE ALA SER ARG ALA LYS ILE VAL HIS ILE ASP ILE ASP SEQRES 25 A 590 SER ALA GLU ILE GLY LYS ASN LYS THR PRO HIS VAL SER SEQRES 26 A 590 VAL CYS GLY ASP VAL LYS LEU ALA LEU GLN GLY MET ASN SEQRES 27 A 590 LYS VAL LEU GLU ASN ARG ALA GLU GLU LEU LYS LEU ASP SEQRES 28 A 590 PHE GLY VAL TRP ARG ASN GLU LEU ASN VAL GLN LYS GLN SEQRES 29 A 590 LYS PHE PRO LEU SER PHE LYS THR PHE GLY GLU ALA ILE SEQRES 30 A 590 PRO PRO GLN TYR ALA ILE LYS VAL LEU ASP GLU LEU THR SEQRES 31 A 590 ASP GLY LYS ALA ILE ILE SER THR GLY VAL GLY GLN HIS SEQRES 32 A 590 GLN MET TRP ALA ALA GLN PHE TYR ASN TYR LYS LYS PRO SEQRES 33 A 590 ARG GLN TRP LEU SER SER GLY GLY LEU GLY ALA MET GLY SEQRES 34 A 590 PHE GLY LEU PRO ALA ALA ILE GLY ALA SER VAL ALA ASN SEQRES 35 A 590 PRO ASP ALA ILE VAL VAL ASP ILE ASP GLY ASP GLY SER SEQRES 36 A 590 PHE ILE MET ASN VAL GLN GLU LEU ALA THR ILE ARG VAL SEQRES 37 A 590 GLU ASN LEU PRO VAL LYS VAL LEU LEU LEU ASN ASN GLN SEQRES 38 A 590 HIS LEU GLY MET VAL MET GLN TRP GLU ASP ARG PHE TYR SEQRES 39 A 590 LYS ALA ASN ARG ALA HIS THR PHE LEU GLY ASP PRO ALA SEQRES 40 A 590 GLN GLU ASP GLU ILE PHE PRO ASN MET LEU LEU PHE ALA SEQRES 41 A 590 ALA ALA CYS GLY ILE PRO ALA ALA ARG VAL THR LYS LYS SEQRES 42 A 590 ALA ASP LEU ARG GLU ALA ILE GLN THR MET LEU ASP THR SEQRES 43 A 590 PRO GLY PRO TYR LEU LEU ASP VAL ILE CYS PRO HIS GLN SEQRES 44 A 590 GLU HIS VAL LEU PRO MET ILE PRO SER GLY GLY THR PHE SEQRES 45 A 590 ASN ASP VAL ILE THR GLU GLY ASP GLY ARG LEU GLU HIS SEQRES 46 A 590 HIS HIS HIS HIS HIS MODRES 5K6R CSD A 340 CYS MODIFIED RESIDUE HET CSD A 340 8 HET MG A 701 1 HET FAD A 702 53 HET 6R5 A 703 25 HET NHE A 704 13 HET K A 705 1 HET TZD A 706 27 HETNAM CSD 3-SULFINOALANINE HETNAM MG MAGNESIUM ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM 6R5 METHYL 4-[(3-METHOXY-4-METHYL-5-OXIDANYLIDENE-1,2,4- HETNAM 2 6R5 TRIAZOL-1-YL)CARBONYLSULFAMOYL]-5-METHYL-THIOPHENE-3- HETNAM 3 6R5 CARBOXYLATE HETNAM NHE 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID HETNAM K POTASSIUM ION HETNAM TZD 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL- HETNAM 2 TZD 2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN HETNAM 3 TZD DIPHOSPHATE HETSYN CSD S-CYSTEINESULFINIC ACID; S-SULFINOCYSTEINE HETSYN NHE N-CYCLOHEXYLTAURINE; CHES HETSYN TZD THIAMIN THIAZOLONE DIPHOSPHATE FORMUL 1 CSD C3 H7 N O4 S FORMUL 2 MG MG 2+ FORMUL 3 FAD C27 H33 N9 O15 P2 FORMUL 4 6R5 C12 H14 N4 O7 S2 FORMUL 5 NHE C8 H17 N O3 S FORMUL 6 K K 1+ FORMUL 7 TZD C12 H18 N4 O8 P2 S FORMUL 8 HOH *389(H2 O) HELIX 1 AA1 GLY A 99 ARG A 109 1 11 HELIX 2 AA2 GLY A 120 ALA A 122 5 3 HELIX 3 AA3 SER A 123 SER A 133 1 11 HELIX 4 AA4 HIS A 143 SER A 157 1 15 HELIX 5 AA5 GLY A 169 ASN A 174 1 6 HELIX 6 AA6 LEU A 175 SER A 186 1 12 HELIX 7 AA7 PRO A 197 ILE A 201 5 5 HELIX 8 AA8 PRO A 210 ARG A 216 1 7 HELIX 9 AA9 ASP A 227 GLU A 229 5 3 HELIX 10 AB1 ASP A 230 SER A 244 1 15 HELIX 11 AB2 LYS A 256 GLN A 261 1 6 HELIX 12 AB3 LEU A 273 ARG A 279 1 7 HELIX 13 AB4 GLU A 285 GLU A 298 1 14 HELIX 14 AB5 GLY A 308 LEU A 311 5 4 HELIX 15 AB6 SER A 313 GLY A 325 1 13 HELIX 16 AB7 THR A 354 SER A 364 1 11 HELIX 17 AB8 ASP A 375 GLY A 380 1 6 HELIX 18 AB9 ASP A 397 ILE A 401 5 5 HELIX 19 AC1 ASP A 414 ARG A 429 1 16 HELIX 20 AC2 PHE A 437 PHE A 451 1 15 HELIX 21 AC3 PRO A 463 ASP A 476 1 14 HELIX 22 AC4 GLY A 486 PHE A 495 1 10 HELIX 23 AC5 PHE A 515 ASN A 527 1 13 HELIX 24 AC6 ASP A 538 ASN A 544 1 7 HELIX 25 AC7 GLN A 546 GLU A 554 1 9 HELIX 26 AC8 LEU A 568 TYR A 579 1 12 HELIX 27 AC9 ASP A 590 GLU A 594 5 5 HELIX 28 AD1 ASN A 600 CYS A 608 1 9 HELIX 29 AD2 LYS A 617 THR A 631 1 15 HELIX 30 AD3 THR A 656 VAL A 660 5 5 SHEET 1 AA1 2 ARG A 97 LYS A 98 0 SHEET 2 AA1 2 LEU A 262 ALA A 263 -1 O ALA A 263 N ARG A 97 SHEET 1 AA2 6 ARG A 137 ASN A 138 0 SHEET 2 AA2 6 THR A 114 ALA A 117 1 N VAL A 115 O ARG A 137 SHEET 3 AA2 6 GLY A 162 ALA A 166 1 O ILE A 165 N PHE A 116 SHEET 4 AA2 6 LEU A 189 GLN A 195 1 O VAL A 190 N GLY A 162 SHEET 5 AA2 6 PRO A 249 PRO A 255 1 O VAL A 254 N THR A 193 SHEET 6 AA2 6 HIS A 221 LEU A 224 1 N TYR A 223 O ASP A 253 SHEET 1 AA3 6 SER A 345 MET A 348 0 SHEET 2 AA3 6 VAL A 328 SER A 330 1 N VAL A 328 O LEU A 346 SHEET 3 AA3 6 PRO A 302 VAL A 306 1 N LEU A 304 O ALA A 329 SHEET 4 AA3 6 LEU A 366 PHE A 370 1 O LEU A 368 N TYR A 305 SHEET 5 AA3 6 LYS A 390 ASP A 395 1 O VAL A 392 N ALA A 369 SHEET 6 AA3 6 VAL A 409 CYS A 412 1 O VAL A 411 N HIS A 393 SHEET 1 AA4 6 TRP A 504 LEU A 505 0 SHEET 2 AA4 6 ILE A 480 THR A 483 1 N ILE A 481 O LEU A 505 SHEET 3 AA4 6 VAL A 532 GLY A 537 1 O VAL A 533 N ILE A 480 SHEET 4 AA4 6 VAL A 558 ASN A 564 1 O LYS A 559 N ASP A 534 SHEET 5 AA4 6 TYR A 635 ILE A 640 1 O VAL A 639 N ASN A 564 SHEET 6 AA4 6 ALA A 612 VAL A 615 1 N ALA A 613 O ASP A 638 LINK C PRO A 339 N CSD A 340 1555 1555 1.33 LINK C CSD A 340 N ASP A 341 1555 1555 1.33 LINK OD1 ASP A 538 MG MG A 701 1555 1555 2.20 LINK O MET A 543 K K A 705 1555 1555 2.74 LINK O MET A 543 K K A 705 1555 12544 2.74 LINK OE1 GLN A 546 K K A 705 1555 1555 2.82 LINK OE1 GLN A 546 K K A 705 1555 12544 2.82 LINK OD1 ASN A 565 MG MG A 701 1555 1555 2.14 LINK O HIS A 567 MG MG A 701 1555 1555 2.12 LINK MG MG A 701 O13 TZD A 706 1555 1555 2.21 LINK MG MG A 701 O22 TZD A 706 1555 1555 2.34 LINK MG MG A 701 O HOH A 907 1555 1555 2.16 LINK K K A 705 O HOH A 882 1555 1555 3.35 LINK K K A 705 O HOH A 882 1555 12544 3.35 CISPEP 1 PHE A 598 PRO A 599 0 -3.91 CISPEP 2 LEU A 648 PRO A 649 0 -3.03 SITE 1 AC1 5 ASP A 538 ASN A 565 HIS A 567 TZD A 706 SITE 2 AC1 5 HOH A 907 SITE 1 AC2 35 PHE A 206 ARG A 246 GLY A 307 GLY A 308 SITE 2 AC2 35 GLY A 309 THR A 331 LEU A 332 MET A 333 SITE 3 AC2 35 LEU A 349 GLY A 350 MET A 351 HIS A 352 SITE 4 AC2 35 GLY A 371 VAL A 372 ARG A 373 ASP A 375 SITE 5 AC2 35 ARG A 377 VAL A 378 ASP A 395 ILE A 396 SITE 6 AC2 35 ASP A 397 GLU A 400 GLY A 413 ASP A 414 SITE 7 AC2 35 VAL A 415 GLN A 489 MET A 490 GLY A 508 SITE 8 AC2 35 GLY A 509 HOH A 801 HOH A 817 HOH A 823 SITE 9 AC2 35 HOH A 847 HOH A 852 HOH A 856 SITE 1 AC3 11 GLY A 121 VAL A 196 PRO A 197 PHE A 206 SITE 2 AC3 11 GLN A 207 LYS A 256 ARG A 377 TRP A 574 SITE 3 AC3 11 SER A 653 HOH A 820 HOH A1024 SITE 1 AC4 7 LYS A 220 HIS A 221 LEU A 273 PRO A 274 SITE 2 AC4 7 GLY A 275 TYR A 276 HOH A 807 SITE 1 AC5 2 MET A 543 GLN A 546 SITE 1 AC6 26 PRO A 119 GLU A 144 PRO A 170 ASN A 174 SITE 2 AC6 26 GLN A 207 VAL A 485 GLY A 486 GLN A 487 SITE 3 AC6 26 HIS A 488 GLY A 511 MET A 513 ASP A 538 SITE 4 AC6 26 GLY A 539 SER A 540 ASN A 565 HIS A 567 SITE 5 AC6 26 LEU A 568 GLY A 569 MET A 570 VAL A 571 SITE 6 AC6 26 MG A 701 HOH A 820 HOH A 841 HOH A 859 SITE 7 AC6 26 HOH A 907 HOH A1017 CRYST1 180.364 180.364 186.467 90.00 90.00 120.00 P 64 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005544 0.003201 0.000000 0.00000 SCALE2 0.000000 0.006402 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005363 0.00000