data_5K6V # _entry.id 5K6V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5K6V pdb_00005k6v 10.2210/pdb5k6v/pdb WWPDB D_1000221715 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-09-28 2 'Structure model' 2 0 2020-07-29 3 'Structure model' 2 1 2024-04-03 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 3 'Structure model' 'Refinement description' 8 3 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' pdbx_branch_scheme 5 2 'Structure model' pdbx_chem_comp_identifier 6 2 'Structure model' pdbx_entity_branch 7 2 'Structure model' pdbx_entity_branch_descriptor 8 2 'Structure model' pdbx_entity_branch_link 9 2 'Structure model' pdbx_entity_branch_list 10 2 'Structure model' pdbx_entity_nonpoly 11 2 'Structure model' pdbx_nonpoly_scheme 12 2 'Structure model' pdbx_struct_assembly_gen 13 2 'Structure model' pdbx_struct_conn_angle 14 2 'Structure model' pdbx_struct_oper_list 15 2 'Structure model' struct_asym 16 2 'Structure model' struct_conn 17 2 'Structure model' struct_conn_type 18 2 'Structure model' struct_site 19 2 'Structure model' struct_site_gen 20 3 'Structure model' chem_comp 21 3 'Structure model' chem_comp_atom 22 3 'Structure model' chem_comp_bond 23 3 'Structure model' database_2 24 3 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_seq_id' 7 2 'Structure model' '_atom_site.label_asym_id' 8 2 'Structure model' '_atom_site.label_entity_id' 9 2 'Structure model' '_chem_comp.name' 10 2 'Structure model' '_chem_comp.type' 11 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 2 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 15 2 'Structure model' '_struct_conn.conn_type_id' 16 2 'Structure model' '_struct_conn.id' 17 2 'Structure model' '_struct_conn.pdbx_dist_value' 18 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 19 2 'Structure model' '_struct_conn.pdbx_role' 20 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 21 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 28 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 29 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 30 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 31 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 32 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 33 2 'Structure model' '_struct_conn.ptnr2_symmetry' 34 2 'Structure model' '_struct_conn_type.id' 35 3 'Structure model' '_chem_comp.pdbx_synonyms' 36 3 'Structure model' '_database_2.pdbx_DOI' 37 3 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5K6V _pdbx_database_status.recvd_initial_deposition_date 2016-05-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 5K6U PDB . unspecified 5K6W PDB . unspecified 5K6X PDB . unspecified 5K6Y PDB . unspecified 5K6Z PDB . unspecified 5K70 PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jin, X.' 1 'Goodman, K.M.' 2 'Mannepalli, S.' 3 'Honig, B.' 4 'Shapiro, L.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Elife _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2050-084X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 5 _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'Molecular basis of sidekick-mediated cell-cell adhesion and specificity.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.7554/eLife.19058 _citation.pdbx_database_id_PubMed 27644106 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Goodman, K.M.' 1 ? primary 'Yamagata, M.' 2 ? primary 'Jin, X.' 3 ? primary 'Mannepalli, S.' 4 ? primary 'Katsamba, P.S.' 5 ? primary 'Ahlsen, G.' 6 ? primary 'Sergeeva, A.P.' 7 ? primary 'Honig, B.' 8 ? primary 'Sanes, J.R.' 9 ? primary 'Shapiro, L.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein sidekick-1' 42482.148 1 ? ? ? 'Unobserved N-terminal residues GPALA are from the expression vector and would be cleaved off in the native protein.' 2 branched man 'beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 586.542 1 ? ? ? ? 3 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 5 non-polymer nat 'ZINC ION' 65.409 6 ? ? ? ? 6 water nat water 18.015 6 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPALAQDDVAPYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELTTYSSEYKYIIPSLQKLDAGFYRCVVRN RMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPIVSCPQPQVTWFREGHKIIPSSRIAITLENQLVILATTA SDAGAYYVQAVNEKNGENKTSPFIHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNG VRLTSGLHSYGRRLTITNPTSADTGMYVCEATLRGSTFEPARARAFLSIIEPPYFTAEPESRILGEVEETMDIPCRAMGV PLPTLQWYKDAVPLSKLQNPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGGEVQTHTYLDVTN ; _entity_poly.pdbx_seq_one_letter_code_can ;GPALAQDDVAPYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELTTYSSEYKYIIPSLQKLDAGFYRCVVRN RMGALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPIVSCPQPQVTWFREGHKIIPSSRIAITLENQLVILATTA SDAGAYYVQAVNEKNGENKTSPFIHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNG VRLTSGLHSYGRRLTITNPTSADTGMYVCEATLRGSTFEPARARAFLSIIEPPYFTAEPESRILGEVEETMDIPCRAMGV PLPTLQWYKDAVPLSKLQNPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGGEVQTHTYLDVTN ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 'ZINC ION' ZN 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 ALA n 1 4 LEU n 1 5 ALA n 1 6 GLN n 1 7 ASP n 1 8 ASP n 1 9 VAL n 1 10 ALA n 1 11 PRO n 1 12 TYR n 1 13 PHE n 1 14 LYS n 1 15 THR n 1 16 GLU n 1 17 PRO n 1 18 GLY n 1 19 LEU n 1 20 PRO n 1 21 GLN n 1 22 ILE n 1 23 HIS n 1 24 LEU n 1 25 GLU n 1 26 GLY n 1 27 ASN n 1 28 ARG n 1 29 LEU n 1 30 VAL n 1 31 LEU n 1 32 THR n 1 33 CYS n 1 34 LEU n 1 35 ALA n 1 36 GLU n 1 37 GLY n 1 38 SER n 1 39 TRP n 1 40 PRO n 1 41 LEU n 1 42 GLU n 1 43 PHE n 1 44 LYS n 1 45 TRP n 1 46 ILE n 1 47 ARG n 1 48 ASN n 1 49 ASP n 1 50 SER n 1 51 GLU n 1 52 LEU n 1 53 THR n 1 54 THR n 1 55 TYR n 1 56 SER n 1 57 SER n 1 58 GLU n 1 59 TYR n 1 60 LYS n 1 61 TYR n 1 62 ILE n 1 63 ILE n 1 64 PRO n 1 65 SER n 1 66 LEU n 1 67 GLN n 1 68 LYS n 1 69 LEU n 1 70 ASP n 1 71 ALA n 1 72 GLY n 1 73 PHE n 1 74 TYR n 1 75 ARG n 1 76 CYS n 1 77 VAL n 1 78 VAL n 1 79 ARG n 1 80 ASN n 1 81 ARG n 1 82 MET n 1 83 GLY n 1 84 ALA n 1 85 LEU n 1 86 LEU n 1 87 GLN n 1 88 ARG n 1 89 LYS n 1 90 SER n 1 91 GLU n 1 92 ILE n 1 93 GLN n 1 94 VAL n 1 95 ALA n 1 96 TYR n 1 97 MET n 1 98 GLY n 1 99 ASN n 1 100 PHE n 1 101 MET n 1 102 ASP n 1 103 THR n 1 104 ASP n 1 105 GLN n 1 106 ARG n 1 107 LYS n 1 108 THR n 1 109 VAL n 1 110 SER n 1 111 GLN n 1 112 GLY n 1 113 HIS n 1 114 ALA n 1 115 ALA n 1 116 LEU n 1 117 LEU n 1 118 ASN n 1 119 LEU n 1 120 LEU n 1 121 PRO n 1 122 ILE n 1 123 VAL n 1 124 SER n 1 125 CYS n 1 126 PRO n 1 127 GLN n 1 128 PRO n 1 129 GLN n 1 130 VAL n 1 131 THR n 1 132 TRP n 1 133 PHE n 1 134 ARG n 1 135 GLU n 1 136 GLY n 1 137 HIS n 1 138 LYS n 1 139 ILE n 1 140 ILE n 1 141 PRO n 1 142 SER n 1 143 SER n 1 144 ARG n 1 145 ILE n 1 146 ALA n 1 147 ILE n 1 148 THR n 1 149 LEU n 1 150 GLU n 1 151 ASN n 1 152 GLN n 1 153 LEU n 1 154 VAL n 1 155 ILE n 1 156 LEU n 1 157 ALA n 1 158 THR n 1 159 THR n 1 160 ALA n 1 161 SER n 1 162 ASP n 1 163 ALA n 1 164 GLY n 1 165 ALA n 1 166 TYR n 1 167 TYR n 1 168 VAL n 1 169 GLN n 1 170 ALA n 1 171 VAL n 1 172 ASN n 1 173 GLU n 1 174 LYS n 1 175 ASN n 1 176 GLY n 1 177 GLU n 1 178 ASN n 1 179 LYS n 1 180 THR n 1 181 SER n 1 182 PRO n 1 183 PHE n 1 184 ILE n 1 185 HIS n 1 186 LEU n 1 187 SER n 1 188 VAL n 1 189 ALA n 1 190 ARG n 1 191 ASP n 1 192 THR n 1 193 GLY n 1 194 THR n 1 195 HIS n 1 196 GLU n 1 197 ALA n 1 198 MET n 1 199 ALA n 1 200 PRO n 1 201 ILE n 1 202 ILE n 1 203 VAL n 1 204 VAL n 1 205 ALA n 1 206 PRO n 1 207 GLY n 1 208 ASN n 1 209 ARG n 1 210 SER n 1 211 VAL n 1 212 VAL n 1 213 ALA n 1 214 GLY n 1 215 SER n 1 216 SER n 1 217 GLU n 1 218 THR n 1 219 THR n 1 220 LEU n 1 221 GLU n 1 222 CYS n 1 223 ILE n 1 224 ALA n 1 225 ASN n 1 226 ALA n 1 227 ARG n 1 228 PRO n 1 229 VAL n 1 230 GLU n 1 231 GLU n 1 232 LEU n 1 233 SER n 1 234 VAL n 1 235 HIS n 1 236 TRP n 1 237 LYS n 1 238 ARG n 1 239 ASN n 1 240 GLY n 1 241 VAL n 1 242 ARG n 1 243 LEU n 1 244 THR n 1 245 SER n 1 246 GLY n 1 247 LEU n 1 248 HIS n 1 249 SER n 1 250 TYR n 1 251 GLY n 1 252 ARG n 1 253 ARG n 1 254 LEU n 1 255 THR n 1 256 ILE n 1 257 THR n 1 258 ASN n 1 259 PRO n 1 260 THR n 1 261 SER n 1 262 ALA n 1 263 ASP n 1 264 THR n 1 265 GLY n 1 266 MET n 1 267 TYR n 1 268 VAL n 1 269 CYS n 1 270 GLU n 1 271 ALA n 1 272 THR n 1 273 LEU n 1 274 ARG n 1 275 GLY n 1 276 SER n 1 277 THR n 1 278 PHE n 1 279 GLU n 1 280 PRO n 1 281 ALA n 1 282 ARG n 1 283 ALA n 1 284 ARG n 1 285 ALA n 1 286 PHE n 1 287 LEU n 1 288 SER n 1 289 ILE n 1 290 ILE n 1 291 GLU n 1 292 PRO n 1 293 PRO n 1 294 TYR n 1 295 PHE n 1 296 THR n 1 297 ALA n 1 298 GLU n 1 299 PRO n 1 300 GLU n 1 301 SER n 1 302 ARG n 1 303 ILE n 1 304 LEU n 1 305 GLY n 1 306 GLU n 1 307 VAL n 1 308 GLU n 1 309 GLU n 1 310 THR n 1 311 MET n 1 312 ASP n 1 313 ILE n 1 314 PRO n 1 315 CYS n 1 316 ARG n 1 317 ALA n 1 318 MET n 1 319 GLY n 1 320 VAL n 1 321 PRO n 1 322 LEU n 1 323 PRO n 1 324 THR n 1 325 LEU n 1 326 GLN n 1 327 TRP n 1 328 TYR n 1 329 LYS n 1 330 ASP n 1 331 ALA n 1 332 VAL n 1 333 PRO n 1 334 LEU n 1 335 SER n 1 336 LYS n 1 337 LEU n 1 338 GLN n 1 339 ASN n 1 340 PRO n 1 341 ARG n 1 342 TYR n 1 343 LYS n 1 344 VAL n 1 345 LEU n 1 346 PRO n 1 347 SER n 1 348 GLY n 1 349 GLY n 1 350 LEU n 1 351 HIS n 1 352 ILE n 1 353 GLN n 1 354 LYS n 1 355 LEU n 1 356 SER n 1 357 PRO n 1 358 GLU n 1 359 ASP n 1 360 SER n 1 361 GLY n 1 362 ILE n 1 363 PHE n 1 364 GLN n 1 365 CYS n 1 366 PHE n 1 367 ALA n 1 368 SER n 1 369 ASN n 1 370 GLU n 1 371 GLY n 1 372 GLY n 1 373 GLU n 1 374 VAL n 1 375 GLN n 1 376 THR n 1 377 HIS n 1 378 THR n 1 379 TYR n 1 380 LEU n 1 381 ASP n 1 382 VAL n 1 383 THR n 1 384 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 384 _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Sdk1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line HEK293 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DManpb1-4DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,3,2/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5]/1-1-2/a4-b1_b4-c1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{}}}}' LINUCS PDB-CARE ? 4 3 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 PRO 2 -3 ? ? ? A . n A 1 3 ALA 3 -2 ? ? ? A . n A 1 4 LEU 4 -1 ? ? ? A . n A 1 5 ALA 5 0 ? ? ? A . n A 1 6 GLN 6 1 1 GLN GLN A . n A 1 7 ASP 7 2 2 ASP ASP A . n A 1 8 ASP 8 3 3 ASP ASP A . n A 1 9 VAL 9 4 4 VAL VAL A . n A 1 10 ALA 10 5 5 ALA ALA A . n A 1 11 PRO 11 6 6 PRO PRO A . n A 1 12 TYR 12 7 7 TYR TYR A . n A 1 13 PHE 13 8 8 PHE PHE A . n A 1 14 LYS 14 9 9 LYS LYS A . n A 1 15 THR 15 10 10 THR THR A . n A 1 16 GLU 16 11 11 GLU GLU A . n A 1 17 PRO 17 12 12 PRO PRO A . n A 1 18 GLY 18 13 13 GLY GLY A . n A 1 19 LEU 19 14 14 LEU LEU A . n A 1 20 PRO 20 15 15 PRO PRO A . n A 1 21 GLN 21 16 16 GLN GLN A . n A 1 22 ILE 22 17 17 ILE ILE A . n A 1 23 HIS 23 18 18 HIS HIS A . n A 1 24 LEU 24 19 19 LEU LEU A . n A 1 25 GLU 25 20 20 GLU GLU A . n A 1 26 GLY 26 21 21 GLY GLY A . n A 1 27 ASN 27 22 22 ASN ASN A . n A 1 28 ARG 28 23 23 ARG ARG A . n A 1 29 LEU 29 24 24 LEU LEU A . n A 1 30 VAL 30 25 25 VAL VAL A . n A 1 31 LEU 31 26 26 LEU LEU A . n A 1 32 THR 32 27 27 THR THR A . n A 1 33 CYS 33 28 28 CYS CYS A . n A 1 34 LEU 34 29 29 LEU LEU A . n A 1 35 ALA 35 30 30 ALA ALA A . n A 1 36 GLU 36 31 31 GLU GLU A . n A 1 37 GLY 37 32 32 GLY GLY A . n A 1 38 SER 38 33 33 SER SER A . n A 1 39 TRP 39 34 34 TRP TRP A . n A 1 40 PRO 40 35 35 PRO PRO A . n A 1 41 LEU 41 36 36 LEU LEU A . n A 1 42 GLU 42 37 37 GLU GLU A . n A 1 43 PHE 43 38 38 PHE PHE A . n A 1 44 LYS 44 39 39 LYS LYS A . n A 1 45 TRP 45 40 40 TRP TRP A . n A 1 46 ILE 46 41 41 ILE ILE A . n A 1 47 ARG 47 42 42 ARG ARG A . n A 1 48 ASN 48 43 43 ASN ASN A . n A 1 49 ASP 49 44 44 ASP ASP A . n A 1 50 SER 50 45 45 SER SER A . n A 1 51 GLU 51 46 46 GLU GLU A . n A 1 52 LEU 52 47 47 LEU LEU A . n A 1 53 THR 53 48 48 THR THR A . n A 1 54 THR 54 49 49 THR THR A . n A 1 55 TYR 55 50 50 TYR TYR A . n A 1 56 SER 56 51 51 SER SER A . n A 1 57 SER 57 52 52 SER SER A . n A 1 58 GLU 58 53 53 GLU GLU A . n A 1 59 TYR 59 54 54 TYR TYR A . n A 1 60 LYS 60 55 55 LYS LYS A . n A 1 61 TYR 61 56 56 TYR TYR A . n A 1 62 ILE 62 57 57 ILE ILE A . n A 1 63 ILE 63 58 58 ILE ILE A . n A 1 64 PRO 64 59 59 PRO PRO A . n A 1 65 SER 65 60 60 SER SER A . n A 1 66 LEU 66 61 61 LEU LEU A . n A 1 67 GLN 67 62 62 GLN GLN A . n A 1 68 LYS 68 63 63 LYS LYS A . n A 1 69 LEU 69 64 64 LEU LEU A . n A 1 70 ASP 70 65 65 ASP ASP A . n A 1 71 ALA 71 66 66 ALA ALA A . n A 1 72 GLY 72 67 67 GLY GLY A . n A 1 73 PHE 73 68 68 PHE PHE A . n A 1 74 TYR 74 69 69 TYR TYR A . n A 1 75 ARG 75 70 70 ARG ARG A . n A 1 76 CYS 76 71 71 CYS CYS A . n A 1 77 VAL 77 72 72 VAL VAL A . n A 1 78 VAL 78 73 73 VAL VAL A . n A 1 79 ARG 79 74 74 ARG ARG A . n A 1 80 ASN 80 75 75 ASN ASN A . n A 1 81 ARG 81 76 76 ARG ARG A . n A 1 82 MET 82 77 77 MET MET A . n A 1 83 GLY 83 78 78 GLY GLY A . n A 1 84 ALA 84 79 79 ALA ALA A . n A 1 85 LEU 85 80 80 LEU LEU A . n A 1 86 LEU 86 81 81 LEU LEU A . n A 1 87 GLN 87 82 82 GLN GLN A . n A 1 88 ARG 88 83 83 ARG ARG A . n A 1 89 LYS 89 84 84 LYS LYS A . n A 1 90 SER 90 85 85 SER SER A . n A 1 91 GLU 91 86 86 GLU GLU A . n A 1 92 ILE 92 87 87 ILE ILE A . n A 1 93 GLN 93 88 88 GLN GLN A . n A 1 94 VAL 94 89 89 VAL VAL A . n A 1 95 ALA 95 90 90 ALA ALA A . n A 1 96 TYR 96 91 91 TYR TYR A . n A 1 97 MET 97 92 92 MET MET A . n A 1 98 GLY 98 93 93 GLY GLY A . n A 1 99 ASN 99 94 94 ASN ASN A . n A 1 100 PHE 100 95 95 PHE PHE A . n A 1 101 MET 101 96 96 MET MET A . n A 1 102 ASP 102 97 97 ASP ASP A . n A 1 103 THR 103 98 98 THR THR A . n A 1 104 ASP 104 99 99 ASP ASP A . n A 1 105 GLN 105 100 100 GLN GLN A . n A 1 106 ARG 106 101 101 ARG ARG A . n A 1 107 LYS 107 102 102 LYS LYS A . n A 1 108 THR 108 103 103 THR THR A . n A 1 109 VAL 109 104 104 VAL VAL A . n A 1 110 SER 110 105 105 SER SER A . n A 1 111 GLN 111 106 106 GLN GLN A . n A 1 112 GLY 112 107 107 GLY GLY A . n A 1 113 HIS 113 108 108 HIS HIS A . n A 1 114 ALA 114 109 109 ALA ALA A . n A 1 115 ALA 115 110 110 ALA ALA A . n A 1 116 LEU 116 111 111 LEU LEU A . n A 1 117 LEU 117 112 112 LEU LEU A . n A 1 118 ASN 118 113 113 ASN ASN A . n A 1 119 LEU 119 114 114 LEU LEU A . n A 1 120 LEU 120 115 115 LEU LEU A . n A 1 121 PRO 121 116 116 PRO PRO A . n A 1 122 ILE 122 117 117 ILE ILE A . n A 1 123 VAL 123 118 118 VAL VAL A . n A 1 124 SER 124 119 119 SER SER A . n A 1 125 CYS 125 120 120 CYS CYS A . n A 1 126 PRO 126 121 121 PRO PRO A . n A 1 127 GLN 127 122 122 GLN GLN A . n A 1 128 PRO 128 123 123 PRO PRO A . n A 1 129 GLN 129 124 124 GLN GLN A . n A 1 130 VAL 130 125 125 VAL VAL A . n A 1 131 THR 131 126 126 THR THR A . n A 1 132 TRP 132 127 127 TRP TRP A . n A 1 133 PHE 133 128 128 PHE PHE A . n A 1 134 ARG 134 129 129 ARG ARG A . n A 1 135 GLU 135 130 130 GLU GLU A . n A 1 136 GLY 136 131 131 GLY GLY A . n A 1 137 HIS 137 132 132 HIS HIS A . n A 1 138 LYS 138 133 133 LYS LYS A . n A 1 139 ILE 139 134 134 ILE ILE A . n A 1 140 ILE 140 135 135 ILE ILE A . n A 1 141 PRO 141 136 136 PRO PRO A . n A 1 142 SER 142 137 137 SER SER A . n A 1 143 SER 143 138 138 SER SER A . n A 1 144 ARG 144 139 139 ARG ARG A . n A 1 145 ILE 145 140 140 ILE ILE A . n A 1 146 ALA 146 141 141 ALA ALA A . n A 1 147 ILE 147 142 142 ILE ILE A . n A 1 148 THR 148 143 143 THR THR A . n A 1 149 LEU 149 144 144 LEU LEU A . n A 1 150 GLU 150 145 145 GLU GLU A . n A 1 151 ASN 151 146 146 ASN ASN A . n A 1 152 GLN 152 147 147 GLN GLN A . n A 1 153 LEU 153 148 148 LEU LEU A . n A 1 154 VAL 154 149 149 VAL VAL A . n A 1 155 ILE 155 150 150 ILE ILE A . n A 1 156 LEU 156 151 151 LEU LEU A . n A 1 157 ALA 157 152 152 ALA ALA A . n A 1 158 THR 158 153 153 THR THR A . n A 1 159 THR 159 154 154 THR THR A . n A 1 160 ALA 160 155 155 ALA ALA A . n A 1 161 SER 161 156 156 SER SER A . n A 1 162 ASP 162 157 157 ASP ASP A . n A 1 163 ALA 163 158 158 ALA ALA A . n A 1 164 GLY 164 159 159 GLY GLY A . n A 1 165 ALA 165 160 160 ALA ALA A . n A 1 166 TYR 166 161 161 TYR TYR A . n A 1 167 TYR 167 162 162 TYR TYR A . n A 1 168 VAL 168 163 163 VAL VAL A . n A 1 169 GLN 169 164 164 GLN GLN A . n A 1 170 ALA 170 165 165 ALA ALA A . n A 1 171 VAL 171 166 166 VAL VAL A . n A 1 172 ASN 172 167 167 ASN ASN A . n A 1 173 GLU 173 168 168 GLU GLU A . n A 1 174 LYS 174 169 169 LYS LYS A . n A 1 175 ASN 175 170 170 ASN ASN A . n A 1 176 GLY 176 171 171 GLY GLY A . n A 1 177 GLU 177 172 172 GLU GLU A . n A 1 178 ASN 178 173 173 ASN ASN A . n A 1 179 LYS 179 174 174 LYS LYS A . n A 1 180 THR 180 175 175 THR THR A . n A 1 181 SER 181 176 176 SER SER A . n A 1 182 PRO 182 177 177 PRO PRO A . n A 1 183 PHE 183 178 178 PHE PHE A . n A 1 184 ILE 184 179 179 ILE ILE A . n A 1 185 HIS 185 180 180 HIS HIS A . n A 1 186 LEU 186 181 181 LEU LEU A . n A 1 187 SER 187 182 182 SER SER A . n A 1 188 VAL 188 183 183 VAL VAL A . n A 1 189 ALA 189 184 184 ALA ALA A . n A 1 190 ARG 190 185 185 ARG ARG A . n A 1 191 ASP 191 186 186 ASP ASP A . n A 1 192 THR 192 187 187 THR THR A . n A 1 193 GLY 193 188 188 GLY GLY A . n A 1 194 THR 194 189 189 THR THR A . n A 1 195 HIS 195 190 190 HIS HIS A . n A 1 196 GLU 196 191 191 GLU GLU A . n A 1 197 ALA 197 192 192 ALA ALA A . n A 1 198 MET 198 193 193 MET MET A . n A 1 199 ALA 199 194 194 ALA ALA A . n A 1 200 PRO 200 195 195 PRO PRO A . n A 1 201 ILE 201 196 196 ILE ILE A . n A 1 202 ILE 202 197 197 ILE ILE A . n A 1 203 VAL 203 198 198 VAL VAL A . n A 1 204 VAL 204 199 199 VAL VAL A . n A 1 205 ALA 205 200 200 ALA ALA A . n A 1 206 PRO 206 201 201 PRO PRO A . n A 1 207 GLY 207 202 202 GLY GLY A . n A 1 208 ASN 208 203 203 ASN ASN A . n A 1 209 ARG 209 204 204 ARG ARG A . n A 1 210 SER 210 205 205 SER SER A . n A 1 211 VAL 211 206 206 VAL VAL A . n A 1 212 VAL 212 207 207 VAL VAL A . n A 1 213 ALA 213 208 208 ALA ALA A . n A 1 214 GLY 214 209 209 GLY GLY A . n A 1 215 SER 215 210 210 SER SER A . n A 1 216 SER 216 211 211 SER SER A . n A 1 217 GLU 217 212 212 GLU GLU A . n A 1 218 THR 218 213 213 THR THR A . n A 1 219 THR 219 214 214 THR THR A . n A 1 220 LEU 220 215 215 LEU LEU A . n A 1 221 GLU 221 216 216 GLU GLU A . n A 1 222 CYS 222 217 217 CYS CYS A . n A 1 223 ILE 223 218 218 ILE ILE A . n A 1 224 ALA 224 219 219 ALA ALA A . n A 1 225 ASN 225 220 220 ASN ASN A . n A 1 226 ALA 226 221 221 ALA ALA A . n A 1 227 ARG 227 222 222 ARG ARG A . n A 1 228 PRO 228 223 223 PRO PRO A . n A 1 229 VAL 229 224 224 VAL VAL A . n A 1 230 GLU 230 225 225 GLU GLU A . n A 1 231 GLU 231 226 226 GLU GLU A . n A 1 232 LEU 232 227 227 LEU LEU A . n A 1 233 SER 233 228 228 SER SER A . n A 1 234 VAL 234 229 229 VAL VAL A . n A 1 235 HIS 235 230 230 HIS HIS A . n A 1 236 TRP 236 231 231 TRP TRP A . n A 1 237 LYS 237 232 232 LYS LYS A . n A 1 238 ARG 238 233 233 ARG ARG A . n A 1 239 ASN 239 234 234 ASN ASN A . n A 1 240 GLY 240 235 235 GLY GLY A . n A 1 241 VAL 241 236 236 VAL VAL A . n A 1 242 ARG 242 237 237 ARG ARG A . n A 1 243 LEU 243 238 238 LEU LEU A . n A 1 244 THR 244 239 239 THR THR A . n A 1 245 SER 245 240 240 SER SER A . n A 1 246 GLY 246 241 241 GLY GLY A . n A 1 247 LEU 247 242 242 LEU LEU A . n A 1 248 HIS 248 243 243 HIS HIS A . n A 1 249 SER 249 244 244 SER SER A . n A 1 250 TYR 250 245 245 TYR TYR A . n A 1 251 GLY 251 246 246 GLY GLY A . n A 1 252 ARG 252 247 247 ARG ARG A . n A 1 253 ARG 253 248 248 ARG ARG A . n A 1 254 LEU 254 249 249 LEU LEU A . n A 1 255 THR 255 250 250 THR THR A . n A 1 256 ILE 256 251 251 ILE ILE A . n A 1 257 THR 257 252 252 THR THR A . n A 1 258 ASN 258 253 253 ASN ASN A . n A 1 259 PRO 259 254 254 PRO PRO A . n A 1 260 THR 260 255 255 THR THR A . n A 1 261 SER 261 256 256 SER SER A . n A 1 262 ALA 262 257 257 ALA ALA A . n A 1 263 ASP 263 258 258 ASP ASP A . n A 1 264 THR 264 259 259 THR THR A . n A 1 265 GLY 265 260 260 GLY GLY A . n A 1 266 MET 266 261 261 MET MET A . n A 1 267 TYR 267 262 262 TYR TYR A . n A 1 268 VAL 268 263 263 VAL VAL A . n A 1 269 CYS 269 264 264 CYS CYS A . n A 1 270 GLU 270 265 265 GLU GLU A . n A 1 271 ALA 271 266 266 ALA ALA A . n A 1 272 THR 272 267 267 THR THR A . n A 1 273 LEU 273 268 268 LEU LEU A . n A 1 274 ARG 274 269 269 ARG ARG A . n A 1 275 GLY 275 270 270 GLY GLY A . n A 1 276 SER 276 271 271 SER SER A . n A 1 277 THR 277 272 272 THR THR A . n A 1 278 PHE 278 273 273 PHE PHE A . n A 1 279 GLU 279 274 274 GLU GLU A . n A 1 280 PRO 280 275 275 PRO PRO A . n A 1 281 ALA 281 276 276 ALA ALA A . n A 1 282 ARG 282 277 277 ARG ARG A . n A 1 283 ALA 283 278 278 ALA ALA A . n A 1 284 ARG 284 279 279 ARG ARG A . n A 1 285 ALA 285 280 280 ALA ALA A . n A 1 286 PHE 286 281 281 PHE PHE A . n A 1 287 LEU 287 282 282 LEU LEU A . n A 1 288 SER 288 283 283 SER SER A . n A 1 289 ILE 289 284 284 ILE ILE A . n A 1 290 ILE 290 285 285 ILE ILE A . n A 1 291 GLU 291 286 286 GLU GLU A . n A 1 292 PRO 292 287 287 PRO PRO A . n A 1 293 PRO 293 288 288 PRO PRO A . n A 1 294 TYR 294 289 289 TYR TYR A . n A 1 295 PHE 295 290 290 PHE PHE A . n A 1 296 THR 296 291 291 THR THR A . n A 1 297 ALA 297 292 292 ALA ALA A . n A 1 298 GLU 298 293 293 GLU GLU A . n A 1 299 PRO 299 294 294 PRO PRO A . n A 1 300 GLU 300 295 295 GLU GLU A . n A 1 301 SER 301 296 296 SER SER A . n A 1 302 ARG 302 297 297 ARG ARG A . n A 1 303 ILE 303 298 298 ILE ILE A . n A 1 304 LEU 304 299 299 LEU LEU A . n A 1 305 GLY 305 300 300 GLY GLY A . n A 1 306 GLU 306 301 301 GLU GLU A . n A 1 307 VAL 307 302 302 VAL VAL A . n A 1 308 GLU 308 303 303 GLU GLU A . n A 1 309 GLU 309 304 304 GLU GLU A . n A 1 310 THR 310 305 305 THR THR A . n A 1 311 MET 311 306 306 MET MET A . n A 1 312 ASP 312 307 307 ASP ASP A . n A 1 313 ILE 313 308 308 ILE ILE A . n A 1 314 PRO 314 309 309 PRO PRO A . n A 1 315 CYS 315 310 310 CYS CYS A . n A 1 316 ARG 316 311 311 ARG ARG A . n A 1 317 ALA 317 312 312 ALA ALA A . n A 1 318 MET 318 313 313 MET MET A . n A 1 319 GLY 319 314 314 GLY GLY A . n A 1 320 VAL 320 315 315 VAL VAL A . n A 1 321 PRO 321 316 316 PRO PRO A . n A 1 322 LEU 322 317 317 LEU LEU A . n A 1 323 PRO 323 318 318 PRO PRO A . n A 1 324 THR 324 319 319 THR THR A . n A 1 325 LEU 325 320 320 LEU LEU A . n A 1 326 GLN 326 321 321 GLN GLN A . n A 1 327 TRP 327 322 322 TRP TRP A . n A 1 328 TYR 328 323 323 TYR TYR A . n A 1 329 LYS 329 324 324 LYS LYS A . n A 1 330 ASP 330 325 325 ASP ASP A . n A 1 331 ALA 331 326 326 ALA ALA A . n A 1 332 VAL 332 327 327 VAL VAL A . n A 1 333 PRO 333 328 328 PRO PRO A . n A 1 334 LEU 334 329 329 LEU LEU A . n A 1 335 SER 335 330 330 SER SER A . n A 1 336 LYS 336 331 331 LYS LYS A . n A 1 337 LEU 337 332 332 LEU LEU A . n A 1 338 GLN 338 333 333 GLN GLN A . n A 1 339 ASN 339 334 334 ASN ASN A . n A 1 340 PRO 340 335 335 PRO PRO A . n A 1 341 ARG 341 336 336 ARG ARG A . n A 1 342 TYR 342 337 337 TYR TYR A . n A 1 343 LYS 343 338 338 LYS LYS A . n A 1 344 VAL 344 339 339 VAL VAL A . n A 1 345 LEU 345 340 340 LEU LEU A . n A 1 346 PRO 346 341 341 PRO PRO A . n A 1 347 SER 347 342 342 SER SER A . n A 1 348 GLY 348 343 343 GLY GLY A . n A 1 349 GLY 349 344 344 GLY GLY A . n A 1 350 LEU 350 345 345 LEU LEU A . n A 1 351 HIS 351 346 346 HIS HIS A . n A 1 352 ILE 352 347 347 ILE ILE A . n A 1 353 GLN 353 348 348 GLN GLN A . n A 1 354 LYS 354 349 349 LYS LYS A . n A 1 355 LEU 355 350 350 LEU LEU A . n A 1 356 SER 356 351 351 SER SER A . n A 1 357 PRO 357 352 352 PRO PRO A . n A 1 358 GLU 358 353 353 GLU GLU A . n A 1 359 ASP 359 354 354 ASP ASP A . n A 1 360 SER 360 355 355 SER SER A . n A 1 361 GLY 361 356 356 GLY GLY A . n A 1 362 ILE 362 357 357 ILE ILE A . n A 1 363 PHE 363 358 358 PHE PHE A . n A 1 364 GLN 364 359 359 GLN GLN A . n A 1 365 CYS 365 360 360 CYS CYS A . n A 1 366 PHE 366 361 361 PHE PHE A . n A 1 367 ALA 367 362 362 ALA ALA A . n A 1 368 SER 368 363 363 SER SER A . n A 1 369 ASN 369 364 364 ASN ASN A . n A 1 370 GLU 370 365 365 GLU GLU A . n A 1 371 GLY 371 366 366 GLY GLY A . n A 1 372 GLY 372 367 367 GLY GLY A . n A 1 373 GLU 373 368 368 GLU GLU A . n A 1 374 VAL 374 369 369 VAL VAL A . n A 1 375 GLN 375 370 370 GLN GLN A . n A 1 376 THR 376 371 371 THR THR A . n A 1 377 HIS 377 372 372 HIS HIS A . n A 1 378 THR 378 373 373 THR THR A . n A 1 379 TYR 379 374 374 TYR TYR A . n A 1 380 LEU 380 375 375 LEU LEU A . n A 1 381 ASP 381 376 376 ASP ASP A . n A 1 382 VAL 382 377 377 VAL VAL A . n A 1 383 THR 383 378 378 THR THR A . n A 1 384 ASN 384 379 379 ASN ASN A . n # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 501 n B 2 NAG 2 B NAG 2 A NAG 502 n B 2 BMA 3 B BMA 3 A BMA 506 n C 3 NAG 1 C NAG 1 A NAG 504 n C 3 NAG 2 C NAG 2 A NAG 505 n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG 1 504 503 NAG NAG A . E 5 ZN 1 507 1 ZN ZN A . F 5 ZN 1 508 2 ZN ZN A . G 5 ZN 1 509 3 ZN ZN A . H 5 ZN 1 510 4 ZN ZN A . I 5 ZN 1 511 5 ZN ZN A . J 5 ZN 1 512 6 ZN ZN A . K 6 HOH 1 601 2 HOH HOH A . K 6 HOH 2 602 4 HOH HOH A . K 6 HOH 3 603 6 HOH HOH A . K 6 HOH 4 604 3 HOH HOH A . K 6 HOH 5 605 1 HOH HOH A . K 6 HOH 6 606 5 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 1 ? CG ? A GLN 6 CG 2 1 Y 1 A GLN 1 ? CD ? A GLN 6 CD 3 1 Y 1 A GLN 1 ? OE1 ? A GLN 6 OE1 4 1 Y 1 A GLN 1 ? NE2 ? A GLN 6 NE2 5 1 Y 1 A ARG 76 ? CG ? A ARG 81 CG 6 1 Y 1 A ARG 76 ? CD ? A ARG 81 CD 7 1 Y 1 A ARG 76 ? NE ? A ARG 81 NE 8 1 Y 1 A ARG 76 ? CZ ? A ARG 81 CZ 9 1 Y 1 A ARG 76 ? NH1 ? A ARG 81 NH1 10 1 Y 1 A ARG 76 ? NH2 ? A ARG 81 NH2 11 1 Y 1 A GLU 304 ? CG ? A GLU 309 CG 12 1 Y 1 A GLU 304 ? CD ? A GLU 309 CD 13 1 Y 1 A GLU 304 ? OE1 ? A GLU 309 OE1 14 1 Y 1 A GLU 304 ? OE2 ? A GLU 309 OE2 15 1 Y 1 A LYS 331 ? CG ? A LYS 336 CG 16 1 Y 1 A LYS 331 ? CD ? A LYS 336 CD 17 1 Y 1 A LYS 331 ? CE ? A LYS 336 CE 18 1 Y 1 A LYS 331 ? NZ ? A LYS 336 NZ 19 1 Y 1 A LYS 338 ? CG ? A LYS 343 CG 20 1 Y 1 A LYS 338 ? CD ? A LYS 343 CD 21 1 Y 1 A LYS 338 ? CE ? A LYS 343 CE 22 1 Y 1 A LYS 338 ? NZ ? A LYS 343 NZ 23 1 Y 1 A LYS 349 ? CG ? A LYS 354 CG 24 1 Y 1 A LYS 349 ? CD ? A LYS 354 CD 25 1 Y 1 A LYS 349 ? CE ? A LYS 354 CE 26 1 Y 1 A LYS 349 ? NZ ? A LYS 354 NZ # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.10.1_2155: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? DENZO ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 5K6V _cell.details ? _cell.formula_units_Z ? _cell.length_a 158.189 _cell.length_a_esd ? _cell.length_b 158.189 _cell.length_b_esd ? _cell.length_c 53.525 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 6 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5K6V _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5K6V _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 4.55 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 72.97 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'BATCH MODE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '10% PEG8000, 0.01M zinc chloride, 0.1M HEPES, pH 7.5' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2010-06-19 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0052 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS BEAMLINE X4C' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0052 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X4C _diffrn_source.pdbx_synchrotron_site NSLS # _reflns.B_iso_Wilson_estimate 70.26 _reflns.entry_id 5K6V _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 3.2 _reflns.d_resolution_low 50 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11639 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 90.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.5 _reflns.pdbx_Rmerge_I_obs 0.147 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 8.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 3.20 _reflns_shell.d_res_low 3.29 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 1.5 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 72.9 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.52 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 3.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5K6V _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 3.208 _refine.ls_d_res_low 34.740 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11639 _refine.ls_number_reflns_R_free 568 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 90.77 _refine.ls_percent_reflns_R_free 4.88 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2088 _refine.ls_R_factor_R_free 0.2441 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2069 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.39 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model Sdk1 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.10 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.47 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2931 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 87 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 3024 _refine_hist.d_res_high 3.208 _refine_hist.d_res_low 34.740 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.002 ? 3100 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.489 ? 4241 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 13.860 ? 1864 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.041 ? 496 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.004 ? 544 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 3.2077 3.5302 . . 116 2294 76.00 . . . 0.3472 . 0.2841 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.5302 4.0404 . . 159 2647 88.00 . . . 0.2907 . 0.2249 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0404 5.0879 . . 144 3003 99.00 . . . 0.1989 . 0.1799 . . . . . . . . . . 'X-RAY DIFFRACTION' 5.0879 34.7420 . . 149 3127 100.00 . . . 0.2226 . 0.1972 . . . . . . . . . . # _struct.entry_id 5K6V _struct.title 'Sidekick-1 immunoglobulin domains 1-4, crystal form 2' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5K6V _struct_keywords.text 'Cell adhesion, immunoglobulin' _struct_keywords.pdbx_keywords 'CELL ADHESION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 5 ? I N N 5 ? J N N 5 ? K N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SDK1_MOUSE _struct_ref.pdbx_db_accession Q3UH53 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ALAQDDVAPYFKTEPGLPQIHLEGNRLVLTCLAEGSWPLEFKWIRNDSELTTYSSEYKYIIPSLQKLDAGFYRCVVRNRM GALLQRKSEIQVAYMGNFMDTDQRKTVSQGHAALLNLLPIVSCPQPQVTWFREGHKIIPSSRIAITLENQLVILATTASD AGAYYVQAVNEKNGENKTSPFIHLSVARDTGTHEAMAPIIVVAPGNRSVVAGSSETTLECIANARPVEELSVHWKRNGVR LTSGLHSYGRRLTITNPTSADTGMYVCEATLRGSTFEPARARAFLSIIEPPYFTAEPESRILGEVEETMDIPCRAMGVPL PTLQWYKDAVPLSKLQNPRYKVLPSGGLHIQKLSPEDSGIFQCFASNEGGEVQTHTYLDVTN ; _struct_ref.pdbx_align_begin 78 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5K6V _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 384 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q3UH53 _struct_ref_seq.db_align_beg 78 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 459 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -2 _struct_ref_seq.pdbx_auth_seq_align_end 379 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5K6V GLY A 1 ? UNP Q3UH53 ? ? 'expression tag' -4 1 1 5K6V PRO A 2 ? UNP Q3UH53 ? ? 'expression tag' -3 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7880 ? 1 MORE -342 ? 1 'SSA (A^2)' 37390 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 6_554 -x,-x+y,-z-1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -17.8416666667 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLN A 67 ? ALA A 71 ? GLN A 62 ALA A 66 5 ? 5 HELX_P HELX_P2 AA2 THR A 159 ? ALA A 163 ? THR A 154 ALA A 158 5 ? 5 HELX_P HELX_P3 AA3 PRO A 228 ? GLU A 230 ? PRO A 223 GLU A 225 5 ? 3 HELX_P HELX_P4 AA4 PRO A 333 ? GLN A 338 ? PRO A 328 GLN A 333 1 ? 6 HELX_P HELX_P5 AA5 SER A 356 ? SER A 360 ? SER A 351 SER A 355 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 33 SG ? ? ? 1_555 A CYS 76 SG ? ? A CYS 28 A CYS 71 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf2 disulf ? ? A CYS 222 SG ? ? ? 1_555 A CYS 269 SG ? ? A CYS 217 A CYS 264 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf3 disulf ? ? A CYS 315 SG ? ? ? 1_555 A CYS 365 SG ? ? A CYS 310 A CYS 360 1_555 ? ? ? ? ? ? ? 2.037 ? ? covale1 covale one ? A ASN 48 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 43 B NAG 1 1_555 ? ? ? ? ? ? ? 1.433 ? N-Glycosylation covale2 covale one ? A ASN 178 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 173 C NAG 1 1_555 ? ? ? ? ? ? ? 1.437 ? N-Glycosylation covale3 covale one ? A ASN 208 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 203 A NAG 504 1_555 ? ? ? ? ? ? ? 1.443 ? N-Glycosylation covale4 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.438 ? ? covale5 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.443 ? ? covale6 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.441 ? ? metalc1 metalc ? ? A HIS 23 ND1 ? ? ? 1_555 E ZN . ZN ? ? A HIS 18 A ZN 507 1_555 ? ? ? ? ? ? ? 2.620 ? ? metalc2 metalc ? ? A ASP 104 OD2 ? ? ? 1_555 I ZN . ZN ? ? A ASP 99 A ZN 511 1_555 ? ? ? ? ? ? ? 2.357 ? ? metalc3 metalc ? ? A HIS 185 NE2 ? ? ? 1_555 I ZN . ZN ? ? A HIS 180 A ZN 511 1_555 ? ? ? ? ? ? ? 2.267 ? ? metalc4 metalc ? ? A ASP 191 OD2 ? ? ? 1_555 G ZN . ZN ? ? A ASP 186 A ZN 509 1_555 ? ? ? ? ? ? ? 2.395 ? ? metalc5 metalc ? ? A GLU 231 OE2 ? ? ? 1_555 I ZN . ZN ? ? A GLU 226 A ZN 511 2_444 ? ? ? ? ? ? ? 2.394 ? ? metalc6 metalc ? ? A ASP 381 OD2 ? ? ? 1_555 F ZN . ZN ? ? A ASP 376 A ZN 508 1_555 ? ? ? ? ? ? ? 2.592 ? ? metalc7 metalc ? ? F ZN . ZN ? ? ? 1_555 K HOH . O ? ? A ZN 508 A HOH 603 1_555 ? ? ? ? ? ? ? 2.556 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 104 ? A ASP 99 ? 1_555 ZN ? I ZN . ? A ZN 511 ? 1_555 NE2 ? A HIS 185 ? A HIS 180 ? 1_555 94.1 ? 2 OD2 ? A ASP 104 ? A ASP 99 ? 1_555 ZN ? I ZN . ? A ZN 511 ? 1_555 OE2 ? A GLU 231 ? A GLU 226 ? 1_555 85.6 ? 3 NE2 ? A HIS 185 ? A HIS 180 ? 1_555 ZN ? I ZN . ? A ZN 511 ? 1_555 OE2 ? A GLU 231 ? A GLU 226 ? 1_555 17.1 ? 4 OD2 ? A ASP 381 ? A ASP 376 ? 1_555 ZN ? F ZN . ? A ZN 508 ? 1_555 O ? K HOH . ? A HOH 603 ? 1_555 57.9 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TRP 39 A . ? TRP 34 A PRO 40 A ? PRO 35 A 1 -2.33 2 CYS 125 A . ? CYS 120 A PRO 126 A ? PRO 121 A 1 0.52 3 ARG 227 A . ? ARG 222 A PRO 228 A ? PRO 223 A 1 -0.74 4 VAL 320 A . ? VAL 315 A PRO 321 A ? PRO 316 A 1 -4.88 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 2 ? AA2 ? 4 ? AA3 ? 4 ? AA4 ? 2 ? AA5 ? 5 ? AA6 ? 4 ? AA7 ? 3 ? AA8 ? 2 ? AA9 ? 5 ? AB1 ? 3 ? AB2 ? 2 ? AB3 ? 4 ? AB4 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA2 1 2 ? parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel AA5 1 2 ? parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA6 1 2 ? parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA8 1 2 ? anti-parallel AA9 1 2 ? parallel AA9 2 3 ? anti-parallel AA9 3 4 ? anti-parallel AA9 4 5 ? anti-parallel AB1 1 2 ? anti-parallel AB1 2 3 ? anti-parallel AB2 1 2 ? anti-parallel AB3 1 2 ? parallel AB3 2 3 ? anti-parallel AB3 3 4 ? anti-parallel AB4 1 2 ? anti-parallel AB4 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 TYR A 12 ? PHE A 13 ? TYR A 7 PHE A 8 AA1 2 ALA A 35 ? GLU A 36 ? ALA A 30 GLU A 31 AA2 1 GLN A 21 ? LEU A 24 ? GLN A 16 LEU A 19 AA2 2 SER A 90 ? MET A 97 ? SER A 85 MET A 92 AA2 3 GLY A 72 ? ARG A 79 ? GLY A 67 ARG A 74 AA2 4 ALA A 84 ? LEU A 86 ? ALA A 79 LEU A 81 AA3 1 GLU A 42 ? ARG A 47 ? GLU A 37 ARG A 42 AA3 2 GLY A 72 ? ARG A 79 ? GLY A 67 ARG A 74 AA3 3 SER A 90 ? MET A 97 ? SER A 85 MET A 92 AA3 4 SER A 124 ? CYS A 125 ? SER A 119 CYS A 120 AA4 1 LEU A 29 ? THR A 32 ? LEU A 24 THR A 27 AA4 2 LYS A 60 ? ILE A 63 ? LYS A 55 ILE A 58 AA5 1 GLN A 105 ? SER A 110 ? GLN A 100 SER A 105 AA5 2 ILE A 184 ? ALA A 189 ? ILE A 179 ALA A 184 AA5 3 GLY A 164 ? VAL A 171 ? GLY A 159 VAL A 166 AA5 4 GLN A 129 ? ARG A 134 ? GLN A 124 ARG A 129 AA5 5 HIS A 137 ? LYS A 138 ? HIS A 132 LYS A 133 AA6 1 GLN A 105 ? SER A 110 ? GLN A 100 SER A 105 AA6 2 ILE A 184 ? ALA A 189 ? ILE A 179 ALA A 184 AA6 3 GLY A 164 ? VAL A 171 ? GLY A 159 VAL A 166 AA6 4 ASN A 178 ? THR A 180 ? ASN A 173 THR A 175 AA7 1 ALA A 115 ? LEU A 117 ? ALA A 110 LEU A 112 AA7 2 LEU A 153 ? ILE A 155 ? LEU A 148 ILE A 150 AA7 3 ILE A 145 ? ILE A 147 ? ILE A 140 ILE A 142 AA8 1 MET A 198 ? VAL A 204 ? MET A 193 VAL A 199 AA8 2 ILE A 223 ? ARG A 227 ? ILE A 218 ARG A 222 AA9 1 ARG A 209 ? VAL A 212 ? ARG A 204 VAL A 207 AA9 2 ALA A 281 ? ILE A 290 ? ALA A 276 ILE A 285 AA9 3 GLY A 265 ? LEU A 273 ? GLY A 260 LEU A 268 AA9 4 LEU A 232 ? ARG A 238 ? LEU A 227 ARG A 233 AA9 5 VAL A 241 ? ARG A 242 ? VAL A 236 ARG A 237 AB1 1 GLU A 217 ? GLU A 221 ? GLU A 212 GLU A 216 AB1 2 ARG A 253 ? THR A 257 ? ARG A 248 THR A 252 AB1 3 LEU A 247 ? HIS A 248 ? LEU A 242 HIS A 243 AB2 1 TYR A 294 ? ALA A 297 ? TYR A 289 ALA A 292 AB2 2 ARG A 316 ? MET A 318 ? ARG A 311 MET A 313 AB3 1 ARG A 302 ? GLY A 305 ? ARG A 297 GLY A 300 AB3 2 GLY A 372 ? VAL A 382 ? GLY A 367 VAL A 377 AB3 3 GLY A 361 ? ASN A 369 ? GLY A 356 ASN A 364 AB3 4 THR A 324 ? LYS A 329 ? THR A 319 LYS A 324 AB4 1 MET A 311 ? ILE A 313 ? MET A 306 ILE A 308 AB4 2 LEU A 350 ? ILE A 352 ? LEU A 345 ILE A 347 AB4 3 TYR A 342 ? VAL A 344 ? TYR A 337 VAL A 339 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TYR A 12 ? N TYR A 7 O GLU A 36 ? O GLU A 31 AA2 1 2 N HIS A 23 ? N HIS A 18 O ALA A 95 ? O ALA A 90 AA2 2 3 O SER A 90 ? O SER A 85 N TYR A 74 ? N TYR A 69 AA2 3 4 N VAL A 78 ? N VAL A 73 O LEU A 85 ? O LEU A 80 AA3 1 2 N LYS A 44 ? N LYS A 39 O VAL A 77 ? O VAL A 72 AA3 2 3 N TYR A 74 ? N TYR A 69 O SER A 90 ? O SER A 85 AA3 3 4 N TYR A 96 ? N TYR A 91 O CYS A 125 ? O CYS A 120 AA4 1 2 N LEU A 29 ? N LEU A 24 O ILE A 63 ? O ILE A 58 AA5 1 2 N GLN A 105 ? N GLN A 100 O HIS A 185 ? O HIS A 180 AA5 2 3 O LEU A 186 ? O LEU A 181 N GLY A 164 ? N GLY A 159 AA5 3 4 O TYR A 167 ? O TYR A 162 N PHE A 133 ? N PHE A 128 AA5 4 5 N ARG A 134 ? N ARG A 129 O HIS A 137 ? O HIS A 132 AA6 1 2 N GLN A 105 ? N GLN A 100 O HIS A 185 ? O HIS A 180 AA6 2 3 O LEU A 186 ? O LEU A 181 N GLY A 164 ? N GLY A 159 AA6 3 4 N ALA A 170 ? N ALA A 165 O LYS A 179 ? O LYS A 174 AA7 1 2 N ALA A 115 ? N ALA A 110 O ILE A 155 ? O ILE A 150 AA7 2 3 O VAL A 154 ? O VAL A 149 N ALA A 146 ? N ALA A 141 AA8 1 2 N ILE A 201 ? N ILE A 196 O ASN A 225 ? O ASN A 220 AA9 1 2 N ARG A 209 ? N ARG A 204 O PHE A 286 ? O PHE A 281 AA9 2 3 O ALA A 285 ? O ALA A 280 N TYR A 267 ? N TYR A 262 AA9 3 4 O VAL A 268 ? O VAL A 263 N LYS A 237 ? N LYS A 232 AA9 4 5 N ARG A 238 ? N ARG A 233 O VAL A 241 ? O VAL A 236 AB1 1 2 N LEU A 220 ? N LEU A 215 O LEU A 254 ? O LEU A 249 AB1 2 3 O ARG A 253 ? O ARG A 248 N HIS A 248 ? N HIS A 243 AB2 1 2 N TYR A 294 ? N TYR A 289 O MET A 318 ? O MET A 313 AB3 1 2 N ILE A 303 ? N ILE A 298 O ASP A 381 ? O ASP A 376 AB3 2 3 O VAL A 374 ? O VAL A 369 N ALA A 367 ? N ALA A 362 AB3 3 4 O SER A 368 ? O SER A 363 N THR A 324 ? N THR A 319 AB4 1 2 N ILE A 313 ? N ILE A 308 O LEU A 350 ? O LEU A 345 AB4 2 3 O HIS A 351 ? O HIS A 346 N LYS A 343 ? N LYS A 338 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 137 ? ? -132.33 -159.86 2 1 THR A 239 ? ? -133.00 -40.59 3 1 CYS A 310 ? ? -167.51 94.68 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 54.4362 -65.2431 -1.4424 0.5518 0.7360 0.4134 -0.1633 0.0926 0.0681 6.9099 3.7555 1.7443 4.9452 3.2232 2.4683 0.3775 -0.8992 -0.4200 0.3325 -0.4988 -0.3680 -0.0651 0.2884 0.1140 'X-RAY DIFFRACTION' 2 ? refined 17.3223 -83.8411 6.0925 0.4986 0.5068 0.2083 -0.0941 -0.0194 -0.0242 5.8619 4.3549 6.4935 -0.9977 -2.2501 -1.5482 -0.3057 -0.4485 -0.0787 0.3219 0.2819 0.1289 -0.1008 -0.1464 0.0624 'X-RAY DIFFRACTION' 3 ? refined 10.0785 -62.7058 1.0727 0.5543 0.6386 0.4930 0.0080 -0.1372 -0.0144 3.9074 7.2875 4.5583 3.3275 1.2387 0.7911 -0.2278 -0.1072 1.2011 -0.2234 -0.1251 0.2715 -0.3046 -0.0094 0.3752 'X-RAY DIFFRACTION' 4 ? refined 52.4622 -44.7241 6.8945 0.6596 0.9324 0.8005 -0.3370 0.2220 -0.3346 1.4779 5.7554 6.1998 1.8276 -0.2383 -1.1547 0.5215 -1.5152 1.4244 0.3564 -0.5270 1.1491 -0.2537 -0.0940 -0.0471 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and ((resseq 1:90)) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and ((resseq 91:189)) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and ((resseq 190:285)) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and ((resseq 286:379)) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A PRO -3 ? A PRO 2 3 1 Y 1 A ALA -2 ? A ALA 3 4 1 Y 1 A LEU -1 ? A LEU 4 5 1 Y 1 A ALA 0 ? A ALA 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CYS N N N N 98 CYS CA C N R 99 CYS C C N N 100 CYS O O N N 101 CYS CB C N N 102 CYS SG S N N 103 CYS OXT O N N 104 CYS H H N N 105 CYS H2 H N N 106 CYS HA H N N 107 CYS HB2 H N N 108 CYS HB3 H N N 109 CYS HG H N N 110 CYS HXT H N N 111 GLN N N N N 112 GLN CA C N S 113 GLN C C N N 114 GLN O O N N 115 GLN CB C N N 116 GLN CG C N N 117 GLN CD C N N 118 GLN OE1 O N N 119 GLN NE2 N N N 120 GLN OXT O N N 121 GLN H H N N 122 GLN H2 H N N 123 GLN HA H N N 124 GLN HB2 H N N 125 GLN HB3 H N N 126 GLN HG2 H N N 127 GLN HG3 H N N 128 GLN HE21 H N N 129 GLN HE22 H N N 130 GLN HXT H N N 131 GLU N N N N 132 GLU CA C N S 133 GLU C C N N 134 GLU O O N N 135 GLU CB C N N 136 GLU CG C N N 137 GLU CD C N N 138 GLU OE1 O N N 139 GLU OE2 O N N 140 GLU OXT O N N 141 GLU H H N N 142 GLU H2 H N N 143 GLU HA H N N 144 GLU HB2 H N N 145 GLU HB3 H N N 146 GLU HG2 H N N 147 GLU HG3 H N N 148 GLU HE2 H N N 149 GLU HXT H N N 150 GLY N N N N 151 GLY CA C N N 152 GLY C C N N 153 GLY O O N N 154 GLY OXT O N N 155 GLY H H N N 156 GLY H2 H N N 157 GLY HA2 H N N 158 GLY HA3 H N N 159 GLY HXT H N N 160 HIS N N N N 161 HIS CA C N S 162 HIS C C N N 163 HIS O O N N 164 HIS CB C N N 165 HIS CG C Y N 166 HIS ND1 N Y N 167 HIS CD2 C Y N 168 HIS CE1 C Y N 169 HIS NE2 N Y N 170 HIS OXT O N N 171 HIS H H N N 172 HIS H2 H N N 173 HIS HA H N N 174 HIS HB2 H N N 175 HIS HB3 H N N 176 HIS HD1 H N N 177 HIS HD2 H N N 178 HIS HE1 H N N 179 HIS HE2 H N N 180 HIS HXT H N N 181 HOH O O N N 182 HOH H1 H N N 183 HOH H2 H N N 184 ILE N N N N 185 ILE CA C N S 186 ILE C C N N 187 ILE O O N N 188 ILE CB C N S 189 ILE CG1 C N N 190 ILE CG2 C N N 191 ILE CD1 C N N 192 ILE OXT O N N 193 ILE H H N N 194 ILE H2 H N N 195 ILE HA H N N 196 ILE HB H N N 197 ILE HG12 H N N 198 ILE HG13 H N N 199 ILE HG21 H N N 200 ILE HG22 H N N 201 ILE HG23 H N N 202 ILE HD11 H N N 203 ILE HD12 H N N 204 ILE HD13 H N N 205 ILE HXT H N N 206 LEU N N N N 207 LEU CA C N S 208 LEU C C N N 209 LEU O O N N 210 LEU CB C N N 211 LEU CG C N N 212 LEU CD1 C N N 213 LEU CD2 C N N 214 LEU OXT O N N 215 LEU H H N N 216 LEU H2 H N N 217 LEU HA H N N 218 LEU HB2 H N N 219 LEU HB3 H N N 220 LEU HG H N N 221 LEU HD11 H N N 222 LEU HD12 H N N 223 LEU HD13 H N N 224 LEU HD21 H N N 225 LEU HD22 H N N 226 LEU HD23 H N N 227 LEU HXT H N N 228 LYS N N N N 229 LYS CA C N S 230 LYS C C N N 231 LYS O O N N 232 LYS CB C N N 233 LYS CG C N N 234 LYS CD C N N 235 LYS CE C N N 236 LYS NZ N N N 237 LYS OXT O N N 238 LYS H H N N 239 LYS H2 H N N 240 LYS HA H N N 241 LYS HB2 H N N 242 LYS HB3 H N N 243 LYS HG2 H N N 244 LYS HG3 H N N 245 LYS HD2 H N N 246 LYS HD3 H N N 247 LYS HE2 H N N 248 LYS HE3 H N N 249 LYS HZ1 H N N 250 LYS HZ2 H N N 251 LYS HZ3 H N N 252 LYS HXT H N N 253 MET N N N N 254 MET CA C N S 255 MET C C N N 256 MET O O N N 257 MET CB C N N 258 MET CG C N N 259 MET SD S N N 260 MET CE C N N 261 MET OXT O N N 262 MET H H N N 263 MET H2 H N N 264 MET HA H N N 265 MET HB2 H N N 266 MET HB3 H N N 267 MET HG2 H N N 268 MET HG3 H N N 269 MET HE1 H N N 270 MET HE2 H N N 271 MET HE3 H N N 272 MET HXT H N N 273 NAG C1 C N R 274 NAG C2 C N R 275 NAG C3 C N R 276 NAG C4 C N S 277 NAG C5 C N R 278 NAG C6 C N N 279 NAG C7 C N N 280 NAG C8 C N N 281 NAG N2 N N N 282 NAG O1 O N N 283 NAG O3 O N N 284 NAG O4 O N N 285 NAG O5 O N N 286 NAG O6 O N N 287 NAG O7 O N N 288 NAG H1 H N N 289 NAG H2 H N N 290 NAG H3 H N N 291 NAG H4 H N N 292 NAG H5 H N N 293 NAG H61 H N N 294 NAG H62 H N N 295 NAG H81 H N N 296 NAG H82 H N N 297 NAG H83 H N N 298 NAG HN2 H N N 299 NAG HO1 H N N 300 NAG HO3 H N N 301 NAG HO4 H N N 302 NAG HO6 H N N 303 PHE N N N N 304 PHE CA C N S 305 PHE C C N N 306 PHE O O N N 307 PHE CB C N N 308 PHE CG C Y N 309 PHE CD1 C Y N 310 PHE CD2 C Y N 311 PHE CE1 C Y N 312 PHE CE2 C Y N 313 PHE CZ C Y N 314 PHE OXT O N N 315 PHE H H N N 316 PHE H2 H N N 317 PHE HA H N N 318 PHE HB2 H N N 319 PHE HB3 H N N 320 PHE HD1 H N N 321 PHE HD2 H N N 322 PHE HE1 H N N 323 PHE HE2 H N N 324 PHE HZ H N N 325 PHE HXT H N N 326 PRO N N N N 327 PRO CA C N S 328 PRO C C N N 329 PRO O O N N 330 PRO CB C N N 331 PRO CG C N N 332 PRO CD C N N 333 PRO OXT O N N 334 PRO H H N N 335 PRO HA H N N 336 PRO HB2 H N N 337 PRO HB3 H N N 338 PRO HG2 H N N 339 PRO HG3 H N N 340 PRO HD2 H N N 341 PRO HD3 H N N 342 PRO HXT H N N 343 SER N N N N 344 SER CA C N S 345 SER C C N N 346 SER O O N N 347 SER CB C N N 348 SER OG O N N 349 SER OXT O N N 350 SER H H N N 351 SER H2 H N N 352 SER HA H N N 353 SER HB2 H N N 354 SER HB3 H N N 355 SER HG H N N 356 SER HXT H N N 357 THR N N N N 358 THR CA C N S 359 THR C C N N 360 THR O O N N 361 THR CB C N R 362 THR OG1 O N N 363 THR CG2 C N N 364 THR OXT O N N 365 THR H H N N 366 THR H2 H N N 367 THR HA H N N 368 THR HB H N N 369 THR HG1 H N N 370 THR HG21 H N N 371 THR HG22 H N N 372 THR HG23 H N N 373 THR HXT H N N 374 TRP N N N N 375 TRP CA C N S 376 TRP C C N N 377 TRP O O N N 378 TRP CB C N N 379 TRP CG C Y N 380 TRP CD1 C Y N 381 TRP CD2 C Y N 382 TRP NE1 N Y N 383 TRP CE2 C Y N 384 TRP CE3 C Y N 385 TRP CZ2 C Y N 386 TRP CZ3 C Y N 387 TRP CH2 C Y N 388 TRP OXT O N N 389 TRP H H N N 390 TRP H2 H N N 391 TRP HA H N N 392 TRP HB2 H N N 393 TRP HB3 H N N 394 TRP HD1 H N N 395 TRP HE1 H N N 396 TRP HE3 H N N 397 TRP HZ2 H N N 398 TRP HZ3 H N N 399 TRP HH2 H N N 400 TRP HXT H N N 401 TYR N N N N 402 TYR CA C N S 403 TYR C C N N 404 TYR O O N N 405 TYR CB C N N 406 TYR CG C Y N 407 TYR CD1 C Y N 408 TYR CD2 C Y N 409 TYR CE1 C Y N 410 TYR CE2 C Y N 411 TYR CZ C Y N 412 TYR OH O N N 413 TYR OXT O N N 414 TYR H H N N 415 TYR H2 H N N 416 TYR HA H N N 417 TYR HB2 H N N 418 TYR HB3 H N N 419 TYR HD1 H N N 420 TYR HD2 H N N 421 TYR HE1 H N N 422 TYR HE2 H N N 423 TYR HH H N N 424 TYR HXT H N N 425 VAL N N N N 426 VAL CA C N S 427 VAL C C N N 428 VAL O O N N 429 VAL CB C N N 430 VAL CG1 C N N 431 VAL CG2 C N N 432 VAL OXT O N N 433 VAL H H N N 434 VAL H2 H N N 435 VAL HA H N N 436 VAL HB H N N 437 VAL HG11 H N N 438 VAL HG12 H N N 439 VAL HG13 H N N 440 VAL HG21 H N N 441 VAL HG22 H N N 442 VAL HG23 H N N 443 VAL HXT H N N 444 ZN ZN ZN N N 445 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 GLN N CA sing N N 107 GLN N H sing N N 108 GLN N H2 sing N N 109 GLN CA C sing N N 110 GLN CA CB sing N N 111 GLN CA HA sing N N 112 GLN C O doub N N 113 GLN C OXT sing N N 114 GLN CB CG sing N N 115 GLN CB HB2 sing N N 116 GLN CB HB3 sing N N 117 GLN CG CD sing N N 118 GLN CG HG2 sing N N 119 GLN CG HG3 sing N N 120 GLN CD OE1 doub N N 121 GLN CD NE2 sing N N 122 GLN NE2 HE21 sing N N 123 GLN NE2 HE22 sing N N 124 GLN OXT HXT sing N N 125 GLU N CA sing N N 126 GLU N H sing N N 127 GLU N H2 sing N N 128 GLU CA C sing N N 129 GLU CA CB sing N N 130 GLU CA HA sing N N 131 GLU C O doub N N 132 GLU C OXT sing N N 133 GLU CB CG sing N N 134 GLU CB HB2 sing N N 135 GLU CB HB3 sing N N 136 GLU CG CD sing N N 137 GLU CG HG2 sing N N 138 GLU CG HG3 sing N N 139 GLU CD OE1 doub N N 140 GLU CD OE2 sing N N 141 GLU OE2 HE2 sing N N 142 GLU OXT HXT sing N N 143 GLY N CA sing N N 144 GLY N H sing N N 145 GLY N H2 sing N N 146 GLY CA C sing N N 147 GLY CA HA2 sing N N 148 GLY CA HA3 sing N N 149 GLY C O doub N N 150 GLY C OXT sing N N 151 GLY OXT HXT sing N N 152 HIS N CA sing N N 153 HIS N H sing N N 154 HIS N H2 sing N N 155 HIS CA C sing N N 156 HIS CA CB sing N N 157 HIS CA HA sing N N 158 HIS C O doub N N 159 HIS C OXT sing N N 160 HIS CB CG sing N N 161 HIS CB HB2 sing N N 162 HIS CB HB3 sing N N 163 HIS CG ND1 sing Y N 164 HIS CG CD2 doub Y N 165 HIS ND1 CE1 doub Y N 166 HIS ND1 HD1 sing N N 167 HIS CD2 NE2 sing Y N 168 HIS CD2 HD2 sing N N 169 HIS CE1 NE2 sing Y N 170 HIS CE1 HE1 sing N N 171 HIS NE2 HE2 sing N N 172 HIS OXT HXT sing N N 173 HOH O H1 sing N N 174 HOH O H2 sing N N 175 ILE N CA sing N N 176 ILE N H sing N N 177 ILE N H2 sing N N 178 ILE CA C sing N N 179 ILE CA CB sing N N 180 ILE CA HA sing N N 181 ILE C O doub N N 182 ILE C OXT sing N N 183 ILE CB CG1 sing N N 184 ILE CB CG2 sing N N 185 ILE CB HB sing N N 186 ILE CG1 CD1 sing N N 187 ILE CG1 HG12 sing N N 188 ILE CG1 HG13 sing N N 189 ILE CG2 HG21 sing N N 190 ILE CG2 HG22 sing N N 191 ILE CG2 HG23 sing N N 192 ILE CD1 HD11 sing N N 193 ILE CD1 HD12 sing N N 194 ILE CD1 HD13 sing N N 195 ILE OXT HXT sing N N 196 LEU N CA sing N N 197 LEU N H sing N N 198 LEU N H2 sing N N 199 LEU CA C sing N N 200 LEU CA CB sing N N 201 LEU CA HA sing N N 202 LEU C O doub N N 203 LEU C OXT sing N N 204 LEU CB CG sing N N 205 LEU CB HB2 sing N N 206 LEU CB HB3 sing N N 207 LEU CG CD1 sing N N 208 LEU CG CD2 sing N N 209 LEU CG HG sing N N 210 LEU CD1 HD11 sing N N 211 LEU CD1 HD12 sing N N 212 LEU CD1 HD13 sing N N 213 LEU CD2 HD21 sing N N 214 LEU CD2 HD22 sing N N 215 LEU CD2 HD23 sing N N 216 LEU OXT HXT sing N N 217 LYS N CA sing N N 218 LYS N H sing N N 219 LYS N H2 sing N N 220 LYS CA C sing N N 221 LYS CA CB sing N N 222 LYS CA HA sing N N 223 LYS C O doub N N 224 LYS C OXT sing N N 225 LYS CB CG sing N N 226 LYS CB HB2 sing N N 227 LYS CB HB3 sing N N 228 LYS CG CD sing N N 229 LYS CG HG2 sing N N 230 LYS CG HG3 sing N N 231 LYS CD CE sing N N 232 LYS CD HD2 sing N N 233 LYS CD HD3 sing N N 234 LYS CE NZ sing N N 235 LYS CE HE2 sing N N 236 LYS CE HE3 sing N N 237 LYS NZ HZ1 sing N N 238 LYS NZ HZ2 sing N N 239 LYS NZ HZ3 sing N N 240 LYS OXT HXT sing N N 241 MET N CA sing N N 242 MET N H sing N N 243 MET N H2 sing N N 244 MET CA C sing N N 245 MET CA CB sing N N 246 MET CA HA sing N N 247 MET C O doub N N 248 MET C OXT sing N N 249 MET CB CG sing N N 250 MET CB HB2 sing N N 251 MET CB HB3 sing N N 252 MET CG SD sing N N 253 MET CG HG2 sing N N 254 MET CG HG3 sing N N 255 MET SD CE sing N N 256 MET CE HE1 sing N N 257 MET CE HE2 sing N N 258 MET CE HE3 sing N N 259 MET OXT HXT sing N N 260 NAG C1 C2 sing N N 261 NAG C1 O1 sing N N 262 NAG C1 O5 sing N N 263 NAG C1 H1 sing N N 264 NAG C2 C3 sing N N 265 NAG C2 N2 sing N N 266 NAG C2 H2 sing N N 267 NAG C3 C4 sing N N 268 NAG C3 O3 sing N N 269 NAG C3 H3 sing N N 270 NAG C4 C5 sing N N 271 NAG C4 O4 sing N N 272 NAG C4 H4 sing N N 273 NAG C5 C6 sing N N 274 NAG C5 O5 sing N N 275 NAG C5 H5 sing N N 276 NAG C6 O6 sing N N 277 NAG C6 H61 sing N N 278 NAG C6 H62 sing N N 279 NAG C7 C8 sing N N 280 NAG C7 N2 sing N N 281 NAG C7 O7 doub N N 282 NAG C8 H81 sing N N 283 NAG C8 H82 sing N N 284 NAG C8 H83 sing N N 285 NAG N2 HN2 sing N N 286 NAG O1 HO1 sing N N 287 NAG O3 HO3 sing N N 288 NAG O4 HO4 sing N N 289 NAG O6 HO6 sing N N 290 PHE N CA sing N N 291 PHE N H sing N N 292 PHE N H2 sing N N 293 PHE CA C sing N N 294 PHE CA CB sing N N 295 PHE CA HA sing N N 296 PHE C O doub N N 297 PHE C OXT sing N N 298 PHE CB CG sing N N 299 PHE CB HB2 sing N N 300 PHE CB HB3 sing N N 301 PHE CG CD1 doub Y N 302 PHE CG CD2 sing Y N 303 PHE CD1 CE1 sing Y N 304 PHE CD1 HD1 sing N N 305 PHE CD2 CE2 doub Y N 306 PHE CD2 HD2 sing N N 307 PHE CE1 CZ doub Y N 308 PHE CE1 HE1 sing N N 309 PHE CE2 CZ sing Y N 310 PHE CE2 HE2 sing N N 311 PHE CZ HZ sing N N 312 PHE OXT HXT sing N N 313 PRO N CA sing N N 314 PRO N CD sing N N 315 PRO N H sing N N 316 PRO CA C sing N N 317 PRO CA CB sing N N 318 PRO CA HA sing N N 319 PRO C O doub N N 320 PRO C OXT sing N N 321 PRO CB CG sing N N 322 PRO CB HB2 sing N N 323 PRO CB HB3 sing N N 324 PRO CG CD sing N N 325 PRO CG HG2 sing N N 326 PRO CG HG3 sing N N 327 PRO CD HD2 sing N N 328 PRO CD HD3 sing N N 329 PRO OXT HXT sing N N 330 SER N CA sing N N 331 SER N H sing N N 332 SER N H2 sing N N 333 SER CA C sing N N 334 SER CA CB sing N N 335 SER CA HA sing N N 336 SER C O doub N N 337 SER C OXT sing N N 338 SER CB OG sing N N 339 SER CB HB2 sing N N 340 SER CB HB3 sing N N 341 SER OG HG sing N N 342 SER OXT HXT sing N N 343 THR N CA sing N N 344 THR N H sing N N 345 THR N H2 sing N N 346 THR CA C sing N N 347 THR CA CB sing N N 348 THR CA HA sing N N 349 THR C O doub N N 350 THR C OXT sing N N 351 THR CB OG1 sing N N 352 THR CB CG2 sing N N 353 THR CB HB sing N N 354 THR OG1 HG1 sing N N 355 THR CG2 HG21 sing N N 356 THR CG2 HG22 sing N N 357 THR CG2 HG23 sing N N 358 THR OXT HXT sing N N 359 TRP N CA sing N N 360 TRP N H sing N N 361 TRP N H2 sing N N 362 TRP CA C sing N N 363 TRP CA CB sing N N 364 TRP CA HA sing N N 365 TRP C O doub N N 366 TRP C OXT sing N N 367 TRP CB CG sing N N 368 TRP CB HB2 sing N N 369 TRP CB HB3 sing N N 370 TRP CG CD1 doub Y N 371 TRP CG CD2 sing Y N 372 TRP CD1 NE1 sing Y N 373 TRP CD1 HD1 sing N N 374 TRP CD2 CE2 doub Y N 375 TRP CD2 CE3 sing Y N 376 TRP NE1 CE2 sing Y N 377 TRP NE1 HE1 sing N N 378 TRP CE2 CZ2 sing Y N 379 TRP CE3 CZ3 doub Y N 380 TRP CE3 HE3 sing N N 381 TRP CZ2 CH2 doub Y N 382 TRP CZ2 HZ2 sing N N 383 TRP CZ3 CH2 sing Y N 384 TRP CZ3 HZ3 sing N N 385 TRP CH2 HH2 sing N N 386 TRP OXT HXT sing N N 387 TYR N CA sing N N 388 TYR N H sing N N 389 TYR N H2 sing N N 390 TYR CA C sing N N 391 TYR CA CB sing N N 392 TYR CA HA sing N N 393 TYR C O doub N N 394 TYR C OXT sing N N 395 TYR CB CG sing N N 396 TYR CB HB2 sing N N 397 TYR CB HB3 sing N N 398 TYR CG CD1 doub Y N 399 TYR CG CD2 sing Y N 400 TYR CD1 CE1 sing Y N 401 TYR CD1 HD1 sing N N 402 TYR CD2 CE2 doub Y N 403 TYR CD2 HD2 sing N N 404 TYR CE1 CZ doub Y N 405 TYR CE1 HE1 sing N N 406 TYR CE2 CZ sing Y N 407 TYR CE2 HE2 sing N N 408 TYR CZ OH sing N N 409 TYR OH HH sing N N 410 TYR OXT HXT sing N N 411 VAL N CA sing N N 412 VAL N H sing N N 413 VAL N H2 sing N N 414 VAL CA C sing N N 415 VAL CA CB sing N N 416 VAL CA HA sing N N 417 VAL C O doub N N 418 VAL C OXT sing N N 419 VAL CB CG1 sing N N 420 VAL CB CG2 sing N N 421 VAL CB HB sing N N 422 VAL CG1 HG11 sing N N 423 VAL CG1 HG12 sing N N 424 VAL CG1 HG13 sing N N 425 VAL CG2 HG21 sing N N 426 VAL CG2 HG22 sing N N 427 VAL CG2 HG23 sing N N 428 VAL OXT HXT sing N N 429 # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 3 NAG 1 n 3 NAG 2 n # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details Sdk1 # _atom_sites.entry_id 5K6V _atom_sites.fract_transf_matrix[1][1] 0.006322 _atom_sites.fract_transf_matrix[1][2] 0.003650 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007299 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018683 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_