HEADER HYDROLASE 30-MAY-16 5K8I TITLE CRYSTAL STRUCTURE OF ZIKV NS3 HELICASE IN COMPLEX WITH ATP AND MN2+ COMPND MOL_ID: 1; COMPND 2 MOLECULE: ZIKV NS3 HELICASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ZIKA VIRUS; SOURCE 3 ORGANISM_TAXID: 64320; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS NTPASE, HELICASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.CAO,Y.LI,T.JIN REVDAT 6 20-MAR-24 5K8I 1 REMARK REVDAT 5 09-JUN-21 5K8I 1 TITLE LINK REVDAT 4 06-DEC-17 5K8I 1 JRNL REVDAT 3 11-OCT-17 5K8I 1 REMARK REVDAT 2 04-OCT-17 5K8I 1 JRNL REMARK REVDAT 1 09-NOV-16 5K8I 0 JRNL AUTH X.CAO,Y.LI,X.JIN,Y.LI,F.GUO,T.JIN JRNL TITL MOLECULAR MECHANISM OF DIVALENT-METAL-INDUCED ACTIVATION OF JRNL TITL 2 NS3 HELICASE AND INSIGHTS INTO ZIKA VIRUS INHIBITOR DESIGN. JRNL REF NUCLEIC ACIDS RES. V. 44 10505 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 27915293 JRNL DOI 10.1093/NAR/GKW941 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.10.1_2155 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 44048 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.216 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.380 REMARK 3 FREE R VALUE TEST SET COUNT : 1951 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0156 - 5.0796 0.92 2985 140 0.1651 0.2044 REMARK 3 2 5.0796 - 4.0332 0.96 3093 146 0.1418 0.1588 REMARK 3 3 4.0332 - 3.5237 0.90 2895 135 0.1457 0.1762 REMARK 3 4 3.5237 - 3.2017 0.92 2995 130 0.1698 0.2660 REMARK 3 5 3.2017 - 2.9723 0.96 3093 146 0.1756 0.2332 REMARK 3 6 2.9723 - 2.7971 0.97 3133 143 0.1831 0.2231 REMARK 3 7 2.7971 - 2.6571 0.98 3186 141 0.1783 0.2185 REMARK 3 8 2.6571 - 2.5415 0.96 3062 132 0.1767 0.2153 REMARK 3 9 2.5415 - 2.4436 0.95 3108 146 0.1770 0.2253 REMARK 3 10 2.4436 - 2.3593 0.97 3145 151 0.1722 0.2218 REMARK 3 11 2.3593 - 2.2856 0.98 3214 140 0.1789 0.2221 REMARK 3 12 2.2856 - 2.2202 0.98 3104 156 0.1913 0.2173 REMARK 3 13 2.2202 - 2.1618 0.99 3226 138 0.1818 0.1965 REMARK 3 14 2.1618 - 2.1090 0.99 3167 154 0.1846 0.2256 REMARK 3 15 2.1090 - 2.0611 0.99 3205 143 0.1899 0.2075 REMARK 3 16 2.0611 - 2.0172 0.99 3221 137 0.1893 0.1985 REMARK 3 17 2.0172 - 1.9769 0.96 3092 146 0.1879 0.2247 REMARK 3 18 1.9769 - 1.9396 0.97 3176 140 0.1987 0.2258 REMARK 3 19 1.9396 - 1.9050 0.96 3088 146 0.2213 0.2664 REMARK 3 20 1.9050 - 1.8727 0.98 3178 143 0.2251 0.2805 REMARK 3 21 1.8727 - 1.8425 0.98 3185 158 0.2314 0.2422 REMARK 3 22 1.8425 - 1.8141 0.99 3167 126 0.2561 0.2887 REMARK 3 23 1.8141 - 1.7874 0.99 3206 155 0.2610 0.2542 REMARK 3 24 1.7874 - 1.7623 0.99 3159 139 0.2916 0.3348 REMARK 3 25 1.7623 - 1.7384 0.99 3249 169 0.3096 0.3241 REMARK 3 26 1.7384 - 1.7159 0.99 3122 127 0.3433 0.3946 REMARK 3 27 1.7159 - 1.6944 0.77 2494 122 0.4263 0.3843 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3624 REMARK 3 ANGLE : 0.917 4935 REMARK 3 CHIRALITY : 0.057 546 REMARK 3 PLANARITY : 0.005 635 REMARK 3 DIHEDRAL : 19.787 2229 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE ENTRY CONTAINS FRIEDEL PAIRS IN REMARK 3 I_PLUS/MINUS COLUMNS REMARK 4 REMARK 4 5K8I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 01-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000221327. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 44048 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 2.980 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I_PLUS/MINUS COLUMNS REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.34 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 6000, 5% MPD, 0.1M HEPES PH REMARK 280 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 26.58500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 164 REMARK 465 SER A 165 REMARK 465 VAL A 166 REMARK 465 ASP A 167 REMARK 465 GLY A 168 REMARK 465 ARG A 169 REMARK 465 ARG A 170 REMARK 465 GLU A 171 REMARK 465 GLU A 172 REMARK 465 ALA A 247 REMARK 465 VAL A 248 REMARK 465 ASN A 249 REMARK 465 VAL A 250 REMARK 465 THR A 251 REMARK 465 HIS A 252 REMARK 465 SER A 253 REMARK 465 GLY A 254 REMARK 465 THR A 255 REMARK 465 ILE A 274 REMARK 465 ARG A 275 REMARK 465 VAL A 276 REMARK 465 SER A 621 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 173 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 278 70.05 -100.98 REMARK 500 MET A 414 63.53 -102.75 REMARK 500 GLU A 482 -7.27 -59.65 REMARK 500 LEU A 499 -59.43 -120.29 REMARK 500 GLN A 500 104.39 -177.34 REMARK 500 ASP A 501 -122.02 58.66 REMARK 500 SER A 575 5.36 58.62 REMARK 500 LYS A 591 73.10 -151.58 REMARK 500 CYS A 600 30.80 -141.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 703 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 195 NE2 REMARK 620 2 HOH A 803 O 83.0 REMARK 620 3 HOH A 836 O 88.4 114.6 REMARK 620 4 HOH A 958 O 85.6 63.9 173.9 REMARK 620 5 HOH A1035 O 175.0 92.7 95.8 90.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 704 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 201 OG1 REMARK 620 2 GLU A 286 OE2 95.7 REMARK 620 3 ATP A 701 O3G 172.9 77.2 REMARK 620 4 ATP A 701 O2B 94.5 168.4 92.5 REMARK 620 5 HOH A 829 O 83.7 75.3 93.7 100.4 REMARK 620 6 HOH A 894 O 97.9 96.1 83.6 87.9 171.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 704 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5JWH RELATED DB: PDB REMARK 900 RELATED ID: 5K8L RELATED DB: PDB REMARK 900 RELATED ID: 5K8T RELATED DB: PDB REMARK 900 RELATED ID: 5K8U RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 A SEQUENCE REFERENCE FOR THIS PROTEIN DOES NOT CURRENTLY EXIST. DBREF 5K8I A 164 621 PDB 5K8I 5K8I 164 621 SEQRES 1 A 458 GLY SER VAL ASP GLY ARG ARG GLU GLU GLU THR PRO VAL SEQRES 2 A 458 GLU CYS PHE GLU PRO SER MET LEU LYS LYS LYS GLN LEU SEQRES 3 A 458 THR VAL LEU ASP LEU HIS PRO GLY ALA GLY LYS THR ARG SEQRES 4 A 458 ARG VAL LEU PRO GLU ILE VAL ARG GLU ALA ILE LYS THR SEQRES 5 A 458 ARG LEU ARG THR VAL ILE LEU ALA PRO THR ARG VAL VAL SEQRES 6 A 458 ALA ALA GLU MET GLU GLU ALA LEU ARG GLY LEU PRO VAL SEQRES 7 A 458 ARG TYR MET THR THR ALA VAL ASN VAL THR HIS SER GLY SEQRES 8 A 458 THR GLU ILE VAL ASP LEU MET CYS HIS ALA THR PHE THR SEQRES 9 A 458 SER ARG LEU LEU GLN PRO ILE ARG VAL PRO ASN TYR ASN SEQRES 10 A 458 LEU TYR ILE MET ASP GLU ALA HIS PHE THR ASP PRO SER SEQRES 11 A 458 SER ILE ALA ALA ARG GLY TYR ILE SER THR ARG VAL GLU SEQRES 12 A 458 MET GLY GLU ALA ALA ALA ILE PHE MET THR ALA THR PRO SEQRES 13 A 458 PRO GLY THR ARG ASP ALA PHE PRO ASP SER ASN SER PRO SEQRES 14 A 458 ILE MET ASP THR GLU VAL GLU VAL PRO GLU ARG ALA TRP SEQRES 15 A 458 SER SER GLY PHE ASP TRP VAL THR ASP HIS SER GLY LYS SEQRES 16 A 458 THR VAL TRP PHE VAL PRO SER VAL ARG ASN GLY ASN GLU SEQRES 17 A 458 ILE ALA ALA CYS LEU THR LYS ALA GLY LYS ARG VAL ILE SEQRES 18 A 458 GLN LEU SER ARG LYS THR PHE GLU THR GLU PHE GLN LYS SEQRES 19 A 458 THR LYS HIS GLN GLU TRP ASP PHE VAL VAL THR THR ASP SEQRES 20 A 458 ILE SER GLU MET GLY ALA ASN PHE LYS ALA ASP ARG VAL SEQRES 21 A 458 ILE ASP SER ARG ARG CYS LEU LYS PRO VAL ILE LEU ASP SEQRES 22 A 458 GLY GLU ARG VAL ILE LEU ALA GLY PRO MET PRO VAL THR SEQRES 23 A 458 HIS ALA SER ALA ALA GLN ARG ARG GLY ARG ILE GLY ARG SEQRES 24 A 458 ASN PRO ASN LYS PRO GLY ASP GLU TYR LEU TYR GLY GLY SEQRES 25 A 458 GLY CYS ALA GLU THR ASP GLU ASP HIS ALA HIS TRP LEU SEQRES 26 A 458 GLU ALA ARG MET LEU LEU ASP ASN ILE TYR LEU GLN ASP SEQRES 27 A 458 GLY LEU ILE ALA SER LEU TYR ARG PRO GLU ALA ASP LYS SEQRES 28 A 458 VAL ALA ALA ILE GLU GLY GLU PHE LYS LEU ARG THR GLU SEQRES 29 A 458 GLN ARG LYS THR PHE VAL GLU LEU MET LYS ARG GLY ASP SEQRES 30 A 458 LEU PRO VAL TRP LEU ALA TYR GLN VAL ALA SER ALA GLY SEQRES 31 A 458 ILE THR TYR THR ASP ARG ARG TRP CYS PHE ASP GLY THR SEQRES 32 A 458 THR ASN ASN THR ILE MET GLU ASP SER VAL PRO ALA GLU SEQRES 33 A 458 VAL TRP THR ARG HIS GLY GLU LYS ARG VAL LEU LYS PRO SEQRES 34 A 458 ARG TRP MET ASP ALA ARG VAL CYS SER ASP HIS ALA ALA SEQRES 35 A 458 LEU LYS SER PHE LYS GLU PHE ALA ALA GLY LYS ARG ALA SEQRES 36 A 458 ALA ALA SER HET ATP A 701 31 HET CL A 702 1 HET MN A 703 1 HET MN A 704 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM CL CHLORIDE ION HETNAM MN MANGANESE (II) ION FORMUL 2 ATP C10 H16 N5 O13 P3 FORMUL 3 CL CL 1- FORMUL 4 MN 2(MN 2+) FORMUL 6 HOH *254(H2 O) HELIX 1 AA1 GLU A 180 LYS A 185 5 6 HELIX 2 AA2 ARG A 203 THR A 215 1 13 HELIX 3 AA3 THR A 225 LEU A 236 1 12 HELIX 4 AA4 HIS A 263 LEU A 271 1 9 HELIX 5 AA5 ASP A 291 MET A 307 1 17 HELIX 6 AA6 PHE A 349 ASP A 354 1 6 HELIX 7 AA7 SER A 365 ALA A 379 1 15 HELIX 8 AA8 THR A 390 PHE A 395 1 6 HELIX 9 AA9 GLN A 396 HIS A 400 5 5 HELIX 10 AB1 ASP A 410 MET A 414 5 5 HELIX 11 AB2 THR A 449 GLY A 458 1 10 HELIX 12 AB3 HIS A 484 ASP A 495 1 12 HELIX 13 AB4 TYR A 508 ASP A 513 1 6 HELIX 14 AB5 ARG A 525 ARG A 538 1 14 HELIX 15 AB6 PRO A 542 ALA A 552 1 11 HELIX 16 AB7 ARG A 559 PHE A 563 5 5 HELIX 17 AB8 THR A 566 THR A 570 5 5 HELIX 18 AB9 ASP A 596 SER A 601 5 6 HELIX 19 AC1 ASP A 602 ALA A 614 1 13 SHEET 1 AA1 6 LEU A 189 LEU A 192 0 SHEET 2 AA1 6 ALA A 311 MET A 315 1 O PHE A 314 N THR A 190 SHEET 3 AA1 6 LEU A 281 ASP A 285 1 N MET A 284 O MET A 315 SHEET 4 AA1 6 THR A 219 ALA A 223 1 N LEU A 222 O ILE A 283 SHEET 5 AA1 6 VAL A 258 CYS A 262 1 O ASP A 259 N ILE A 221 SHEET 6 AA1 6 VAL A 241 TYR A 243 1 N ARG A 242 O VAL A 258 SHEET 1 AA2 6 ILE A 333 GLU A 337 0 SHEET 2 AA2 6 ASP A 469 TYR A 473 1 O ASP A 469 N MET A 334 SHEET 3 AA2 6 ARG A 422 ASP A 425 1 N ASP A 425 O LEU A 472 SHEET 4 AA2 6 THR A 359 PHE A 362 1 N VAL A 360 O ARG A 422 SHEET 5 AA2 6 PHE A 405 THR A 408 1 O VAL A 406 N TRP A 361 SHEET 6 AA2 6 VAL A 383 LEU A 386 1 N ILE A 384 O VAL A 407 SHEET 1 AA3 2 ARG A 428 LEU A 435 0 SHEET 2 AA3 2 ARG A 439 PRO A 447 -1 O ALA A 443 N LYS A 431 SHEET 1 AA4 2 MET A 572 GLU A 573 0 SHEET 2 AA4 2 VAL A 576 PRO A 577 -1 O VAL A 576 N GLU A 573 SHEET 1 AA5 2 GLU A 579 TRP A 581 0 SHEET 2 AA5 2 LYS A 587 VAL A 589 -1 O ARG A 588 N VAL A 580 LINK NE2 HIS A 195 MN MN A 703 1555 1555 2.28 LINK OG1 THR A 201 MN MN A 704 1555 1555 2.20 LINK OE2 GLU A 286 MN MN A 704 1555 1555 2.29 LINK O3G ATP A 701 MN MN A 704 1555 1555 2.49 LINK O2B ATP A 701 MN MN A 704 1555 1555 2.08 LINK MN MN A 703 O HOH A 803 1555 1555 1.96 LINK MN MN A 703 O HOH A 836 1555 2957 2.13 LINK MN MN A 703 O HOH A 958 1555 1555 2.44 LINK MN MN A 703 O HOH A1035 1555 2957 2.52 LINK MN MN A 704 O HOH A 829 1555 1555 2.24 LINK MN MN A 704 O HOH A 894 1555 1555 1.88 CISPEP 1 GLY A 444 PRO A 445 0 2.64 SITE 1 AC1 18 PRO A 196 GLY A 197 ALA A 198 GLY A 199 SITE 2 AC1 18 LYS A 200 THR A 201 ARG A 202 GLU A 286 SITE 3 AC1 18 ASN A 417 ARG A 459 ARG A 462 ASN A 463 SITE 4 AC1 18 MN A 704 HOH A 808 HOH A 893 HOH A 894 SITE 5 AC1 18 HOH A 898 HOH A 918 SITE 1 AC2 2 ARG A 388 THR A 409 SITE 1 AC3 3 HIS A 195 HOH A 803 HOH A 958 SITE 1 AC4 5 THR A 201 GLU A 286 ATP A 701 HOH A 829 SITE 2 AC4 5 HOH A 894 CRYST1 63.510 53.170 65.110 90.00 105.31 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015746 0.000000 0.004309 0.00000 SCALE2 0.000000 0.018808 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015923 0.00000