HEADER TRANSFERASE 02-JUN-16 5KB6 TITLE HIGH-RESOLUTION STRUCTURE OF THE ADENOSINE KINASE FROM MUS MUSCULUS IN TITLE 2 COMPLEX WITH ADENOSINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENOSINE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: AK,ADENOSINE 5'-PHOSPHOTRANSFERASE; COMPND 5 EC: 2.7.1.20; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ADK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ADENOSINE KINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR R.R.OLIVEIRA,R.M.NETO,C.C.POLO,C.C.C.TONOLI,M.T.MURAKAMI, AUTHOR 2 K.G.FRANCHINI REVDAT 2 27-DEC-23 5KB6 1 REMARK REVDAT 1 07-JUN-17 5KB6 0 JRNL AUTH R.R.OLIVEIRA,R.M.NETO,C.C.POLO,C.C.C.TONOLI,M.T.MURAKAMI, JRNL AUTH 2 K.G.FRANCHINI JRNL TITL HIGH-RESOLUTION STRUCTURE OF THE ADENOSINE KINASE FROM MUS JRNL TITL 2 MUSCULUS IN COMPLEX WITH ADENOSINE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 216557 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.141 REMARK 3 FREE R VALUE : 0.159 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 11429 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.23 REMARK 3 REFLECTION IN BIN (WORKING SET) : 15719 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 809 REMARK 3 BIN FREE R VALUE : 0.2990 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5390 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 97 REMARK 3 SOLVENT ATOMS : 481 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.22000 REMARK 3 B22 (A**2) : -0.10000 REMARK 3 B33 (A**2) : -0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.13000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.033 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.032 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.027 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.416 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.978 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.975 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5669 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5413 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7676 ; 1.387 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12469 ; 0.918 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 707 ; 5.671 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 272 ;37.583 ;24.779 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 964 ;11.577 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 29 ;14.657 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 851 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6458 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1317 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2771 ; 1.099 ; 1.646 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2768 ; 1.095 ; 1.644 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3465 ; 1.514 ; 2.476 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 11082 ; 1.963 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 143 ;29.460 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 11303 ;11.226 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5KB6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000203403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : W01B-MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.954 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 228026 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.05400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.65300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.69 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50% (V/V) PEG400 0.2 M LITHIUM REMARK 280 SULPHATE 0.1 M SODIUM ACETATE 2.5 MM ADENOSINE, PH 4.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 41.07950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ALA A 3 REMARK 465 ALA A 4 REMARK 465 ASP A 5 REMARK 465 GLU A 6 REMARK 465 PRO A 7 REMARK 465 LYS A 8 REMARK 465 PRO A 9 REMARK 465 LYS A 10 REMARK 465 LYS A 11 REMARK 465 LEU A 12 REMARK 465 LYS A 13 REMARK 465 VAL A 14 REMARK 465 GLU A 15 REMARK 465 ALA A 16 REMARK 465 PRO A 17 REMARK 465 GLN A 18 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ALA B 3 REMARK 465 ALA B 4 REMARK 465 ASP B 5 REMARK 465 GLU B 6 REMARK 465 PRO B 7 REMARK 465 LYS B 8 REMARK 465 PRO B 9 REMARK 465 LYS B 10 REMARK 465 LYS B 11 REMARK 465 LEU B 12 REMARK 465 LYS B 13 REMARK 465 VAL B 14 REMARK 465 GLU B 15 REMARK 465 ALA B 16 REMARK 465 PRO B 17 REMARK 465 GLN B 18 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H GLU A 58 HD1 HIS A 61 1.26 REMARK 500 H GLU B 58 HD1 HIS B 61 1.31 REMARK 500 HH TYR B 341 H ASP B 359 1.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 200 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 39 -168.59 -107.94 REMARK 500 GLN A 94 -56.76 72.98 REMARK 500 ALA A 155 -120.62 48.02 REMARK 500 HIS A 165 -75.64 -144.61 REMARK 500 SER A 214 -48.01 71.08 REMARK 500 ALA A 291 -167.26 -125.72 REMARK 500 ASP A 310 118.58 -162.38 REMARK 500 VAL B 39 -166.95 -107.38 REMARK 500 GLN B 94 -57.62 73.90 REMARK 500 ALA B 155 -121.11 47.59 REMARK 500 HIS B 165 -73.56 -142.52 REMARK 500 SER B 214 -48.89 72.10 REMARK 500 ALA B 291 -168.44 -127.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PG4 B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KB5 RELATED DB: PDB DBREF 5KB6 A 1 361 UNP P55264 ADK_MOUSE 1 361 DBREF 5KB6 B 1 361 UNP P55264 ADK_MOUSE 1 361 SEQADV 5KB6 GLY A -1 UNP P55264 EXPRESSION TAG SEQADV 5KB6 SER A 0 UNP P55264 EXPRESSION TAG SEQADV 5KB6 GLY B -1 UNP P55264 EXPRESSION TAG SEQADV 5KB6 SER B 0 UNP P55264 EXPRESSION TAG SEQRES 1 A 363 GLY SER MET ALA ALA ALA ASP GLU PRO LYS PRO LYS LYS SEQRES 2 A 363 LEU LYS VAL GLU ALA PRO GLN ALA LEU SER GLU ASN VAL SEQRES 3 A 363 LEU PHE GLY MET GLY ASN PRO LEU LEU ASP ILE SER ALA SEQRES 4 A 363 VAL VAL ASP LYS ASP PHE LEU ASP LYS TYR SER LEU LYS SEQRES 5 A 363 PRO ASN ASP GLN ILE LEU ALA GLU ASP LYS HIS LYS GLU SEQRES 6 A 363 LEU PHE ASP GLU LEU VAL LYS LYS PHE LYS VAL GLU TYR SEQRES 7 A 363 HIS ALA GLY GLY SER THR GLN ASN SER MET LYS VAL ALA SEQRES 8 A 363 GLN TRP LEU ILE GLN GLU PRO HIS LYS ALA ALA THR PHE SEQRES 9 A 363 PHE GLY CYS ILE GLY ILE ASP LYS PHE GLY GLU ILE LEU SEQRES 10 A 363 LYS ARG LYS ALA ALA ASP ALA HIS VAL ASP ALA HIS TYR SEQRES 11 A 363 TYR GLU GLN ASN GLU GLN PRO THR GLY THR CYS ALA ALA SEQRES 12 A 363 CYS ILE THR GLY GLY ASN ARG SER LEU VAL ALA ASN LEU SEQRES 13 A 363 ALA ALA ALA ASN CYS TYR LYS LYS GLU LYS HIS LEU ASP SEQRES 14 A 363 LEU GLU ARG ASN TRP VAL LEU VAL GLU LYS ALA ARG VAL SEQRES 15 A 363 TYR TYR ILE ALA GLY PHE PHE LEU THR VAL SER PRO GLU SEQRES 16 A 363 SER VAL LEU LYS VAL ALA ARG TYR ALA ALA GLU ASN ASN SEQRES 17 A 363 ARG VAL PHE THR LEU ASN LEU SER ALA PRO PHE ILE SER SEQRES 18 A 363 GLN PHE PHE LYS GLU ALA LEU MET ASP VAL MET PRO TYR SEQRES 19 A 363 VAL ASP ILE LEU PHE GLY ASN GLU THR GLU ALA ALA THR SEQRES 20 A 363 PHE ALA ARG GLU GLN GLY PHE GLU THR LYS ASP ILE LYS SEQRES 21 A 363 GLU ILE ALA LYS LYS ALA GLN ALA LEU PRO LYS VAL ASN SEQRES 22 A 363 SER LYS ARG GLN ARG THR VAL ILE PHE THR GLN GLY ARG SEQRES 23 A 363 ASP ASP THR ILE VAL ALA ALA GLU ASN ASP VAL THR ALA SEQRES 24 A 363 PHE PRO VAL LEU ASP GLN ASN GLN GLU GLU ILE ILE ASP SEQRES 25 A 363 THR ASN GLY ALA GLY ASP ALA PHE VAL GLY GLY PHE LEU SEQRES 26 A 363 SER GLN LEU VAL SER ASP LYS PRO LEU THR GLU CYS ILE SEQRES 27 A 363 ARG ALA GLY HIS TYR ALA ALA SER VAL ILE ILE ARG ARG SEQRES 28 A 363 THR GLY CYS THR PHE PRO GLU LYS PRO ASP PHE HIS SEQRES 1 B 363 GLY SER MET ALA ALA ALA ASP GLU PRO LYS PRO LYS LYS SEQRES 2 B 363 LEU LYS VAL GLU ALA PRO GLN ALA LEU SER GLU ASN VAL SEQRES 3 B 363 LEU PHE GLY MET GLY ASN PRO LEU LEU ASP ILE SER ALA SEQRES 4 B 363 VAL VAL ASP LYS ASP PHE LEU ASP LYS TYR SER LEU LYS SEQRES 5 B 363 PRO ASN ASP GLN ILE LEU ALA GLU ASP LYS HIS LYS GLU SEQRES 6 B 363 LEU PHE ASP GLU LEU VAL LYS LYS PHE LYS VAL GLU TYR SEQRES 7 B 363 HIS ALA GLY GLY SER THR GLN ASN SER MET LYS VAL ALA SEQRES 8 B 363 GLN TRP LEU ILE GLN GLU PRO HIS LYS ALA ALA THR PHE SEQRES 9 B 363 PHE GLY CYS ILE GLY ILE ASP LYS PHE GLY GLU ILE LEU SEQRES 10 B 363 LYS ARG LYS ALA ALA ASP ALA HIS VAL ASP ALA HIS TYR SEQRES 11 B 363 TYR GLU GLN ASN GLU GLN PRO THR GLY THR CYS ALA ALA SEQRES 12 B 363 CYS ILE THR GLY GLY ASN ARG SER LEU VAL ALA ASN LEU SEQRES 13 B 363 ALA ALA ALA ASN CYS TYR LYS LYS GLU LYS HIS LEU ASP SEQRES 14 B 363 LEU GLU ARG ASN TRP VAL LEU VAL GLU LYS ALA ARG VAL SEQRES 15 B 363 TYR TYR ILE ALA GLY PHE PHE LEU THR VAL SER PRO GLU SEQRES 16 B 363 SER VAL LEU LYS VAL ALA ARG TYR ALA ALA GLU ASN ASN SEQRES 17 B 363 ARG VAL PHE THR LEU ASN LEU SER ALA PRO PHE ILE SER SEQRES 18 B 363 GLN PHE PHE LYS GLU ALA LEU MET ASP VAL MET PRO TYR SEQRES 19 B 363 VAL ASP ILE LEU PHE GLY ASN GLU THR GLU ALA ALA THR SEQRES 20 B 363 PHE ALA ARG GLU GLN GLY PHE GLU THR LYS ASP ILE LYS SEQRES 21 B 363 GLU ILE ALA LYS LYS ALA GLN ALA LEU PRO LYS VAL ASN SEQRES 22 B 363 SER LYS ARG GLN ARG THR VAL ILE PHE THR GLN GLY ARG SEQRES 23 B 363 ASP ASP THR ILE VAL ALA ALA GLU ASN ASP VAL THR ALA SEQRES 24 B 363 PHE PRO VAL LEU ASP GLN ASN GLN GLU GLU ILE ILE ASP SEQRES 25 B 363 THR ASN GLY ALA GLY ASP ALA PHE VAL GLY GLY PHE LEU SEQRES 26 B 363 SER GLN LEU VAL SER ASP LYS PRO LEU THR GLU CYS ILE SEQRES 27 B 363 ARG ALA GLY HIS TYR ALA ALA SER VAL ILE ILE ARG ARG SEQRES 28 B 363 THR GLY CYS THR PHE PRO GLU LYS PRO ASP PHE HIS HET ADN A 401 32 HET SO4 A 402 5 HET CL A 403 1 HET PG4 A 404 31 HET PG4 A 405 31 HET ACT A 406 7 HET ADN B 401 32 HET SO4 B 402 5 HET CL B 403 1 HET PG4 B 404 31 HET ACT B 405 7 HETNAM ADN ADENOSINE HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM ACT ACETATE ION FORMUL 3 ADN 2(C10 H13 N5 O4) FORMUL 4 SO4 2(O4 S 2-) FORMUL 5 CL 2(CL 1-) FORMUL 6 PG4 3(C8 H18 O5) FORMUL 8 ACT 2(C2 H3 O2 1-) FORMUL 14 HOH *481(H2 O) HELIX 1 AA1 ASP A 40 TYR A 47 1 8 HELIX 2 AA2 GLU A 58 LYS A 62 5 5 HELIX 3 AA3 GLU A 63 PHE A 72 1 10 HELIX 4 AA4 GLY A 80 GLN A 94 1 15 HELIX 5 AA5 ASP A 109 ALA A 122 1 14 HELIX 6 AA6 LEU A 154 TYR A 160 5 7 HELIX 7 AA7 LYS A 161 HIS A 165 5 5 HELIX 8 AA8 LEU A 168 LYS A 177 1 10 HELIX 9 AA9 PHE A 186 VAL A 190 5 5 HELIX 10 AB1 SER A 191 ASN A 205 1 15 HELIX 11 AB2 ALA A 215 PHE A 222 1 8 HELIX 12 AB3 PHE A 222 MET A 230 1 9 HELIX 13 AB4 PRO A 231 VAL A 233 5 3 HELIX 14 AB5 GLU A 240 GLN A 250 1 11 HELIX 15 AB6 ASP A 256 ALA A 266 1 11 HELIX 16 AB7 ASN A 304 ILE A 308 5 5 HELIX 17 AB8 GLY A 313 VAL A 327 1 15 HELIX 18 AB9 PRO A 331 ILE A 347 1 17 HELIX 19 AC1 ASP B 40 TYR B 47 1 8 HELIX 20 AC2 GLU B 58 LYS B 62 5 5 HELIX 21 AC3 GLU B 63 PHE B 72 1 10 HELIX 22 AC4 GLY B 80 GLN B 94 1 15 HELIX 23 AC5 ASP B 109 ALA B 122 1 14 HELIX 24 AC6 LEU B 154 TYR B 160 5 7 HELIX 25 AC7 LYS B 161 HIS B 165 5 5 HELIX 26 AC8 LEU B 168 ALA B 178 1 11 HELIX 27 AC9 PHE B 186 VAL B 190 5 5 HELIX 28 AD1 SER B 191 ASN B 205 1 15 HELIX 29 AD2 ALA B 215 PHE B 222 1 8 HELIX 30 AD3 PHE B 222 MET B 230 1 9 HELIX 31 AD4 PRO B 231 VAL B 233 5 3 HELIX 32 AD5 GLU B 240 GLN B 250 1 11 HELIX 33 AD6 ASP B 256 ALA B 266 1 11 HELIX 34 AD7 ASN B 304 ILE B 308 5 5 HELIX 35 AD8 GLY B 313 VAL B 327 1 15 HELIX 36 AD9 PRO B 331 ILE B 347 1 17 SHEET 1 AA1 9 ASP A 125 GLN A 131 0 SHEET 2 AA1 9 ALA A 100 GLY A 107 1 N ALA A 100 O ASP A 125 SHEET 3 AA1 9 LEU A 25 MET A 28 1 N LEU A 25 O THR A 101 SHEET 4 AA1 9 VAL A 180 ALA A 184 1 O TYR A 182 N PHE A 26 SHEET 5 AA1 9 VAL A 208 ASN A 212 1 O VAL A 208 N TYR A 181 SHEET 6 AA1 9 ILE A 235 ASN A 239 1 O PHE A 237 N LEU A 211 SHEET 7 AA1 9 THR A 277 GLN A 282 1 O ILE A 279 N LEU A 236 SHEET 8 AA1 9 ASP A 285 ALA A 290 -1 O ILE A 288 N PHE A 280 SHEET 9 AA1 9 VAL A 295 PHE A 298 -1 O PHE A 298 N THR A 287 SHEET 1 AA2 5 GLN A 54 LEU A 56 0 SHEET 2 AA2 5 ASN A 147 ASN A 153 1 O LEU A 150 N ILE A 55 SHEET 3 AA2 5 THR A 138 THR A 144 -1 N CYS A 142 O SER A 149 SHEET 4 AA2 5 LEU A 32 VAL A 38 1 N ALA A 37 O ILE A 143 SHEET 5 AA2 5 GLU A 75 GLY A 79 -1 O GLU A 75 N SER A 36 SHEET 1 AA3 9 ASP B 125 GLN B 131 0 SHEET 2 AA3 9 ALA B 100 GLY B 107 1 N ALA B 100 O ASP B 125 SHEET 3 AA3 9 LEU B 25 MET B 28 1 N LEU B 25 O THR B 101 SHEET 4 AA3 9 VAL B 180 ALA B 184 1 O TYR B 182 N PHE B 26 SHEET 5 AA3 9 VAL B 208 ASN B 212 1 O VAL B 208 N TYR B 181 SHEET 6 AA3 9 ILE B 235 ASN B 239 1 O PHE B 237 N LEU B 211 SHEET 7 AA3 9 THR B 277 GLN B 282 1 O ILE B 279 N LEU B 236 SHEET 8 AA3 9 ASP B 285 ALA B 290 -1 O ILE B 288 N PHE B 280 SHEET 9 AA3 9 VAL B 295 PHE B 298 -1 O PHE B 298 N THR B 287 SHEET 1 AA4 5 GLN B 54 LEU B 56 0 SHEET 2 AA4 5 ASN B 147 ASN B 153 1 O LEU B 150 N ILE B 55 SHEET 3 AA4 5 THR B 138 THR B 144 -1 N CYS B 142 O SER B 149 SHEET 4 AA4 5 LEU B 32 VAL B 38 1 N ALA B 37 O ILE B 143 SHEET 5 AA4 5 GLU B 75 GLY B 79 -1 O GLY B 79 N LEU B 32 CISPEP 1 GLU A 95 PRO A 96 0 -1.48 CISPEP 2 GLU B 95 PRO B 96 0 1.59 SITE 1 AC1 15 THR A 281 GLY A 283 ARG A 284 THR A 287 SITE 2 AC1 15 ASP A 302 GLN A 305 ILE A 308 ALA A 314 SITE 3 AC1 15 HIS A 340 ALA A 343 HOH A 544 HOH A 564 SITE 4 AC1 15 HOH A 565 HOH A 588 HOH A 603 SITE 1 AC2 8 HIS A 77 ALA A 78 LYS A 87 HOH A 503 SITE 2 AC2 8 HOH A 556 HOH A 596 HOH A 607 HOH A 623 SITE 1 AC3 2 ASN A 30 THR A 82 SITE 1 AC4 4 SER A 344 ARG A 348 HOH A 578 HOH A 728 SITE 1 AC5 2 GLY A 251 LYS A 263 SITE 1 AC6 5 GLY A 313 ALA A 314 GLY A 315 ASP A 316 SITE 2 AC6 5 HOH A 627 SITE 1 AC7 14 THR B 281 GLY B 283 ARG B 284 ASP B 302 SITE 2 AC7 14 GLN B 305 ILE B 308 ALA B 314 HIS B 340 SITE 3 AC7 14 ALA B 343 HOH B 540 HOH B 549 HOH B 553 SITE 4 AC7 14 HOH B 575 HOH B 622 SITE 1 AC8 7 HIS B 77 ALA B 78 LYS B 87 HOH B 503 SITE 2 AC8 7 HOH B 569 HOH B 573 HOH B 606 SITE 1 AC9 2 ASN B 30 THR B 82 SITE 1 AD1 7 ASP B 302 TYR B 341 SER B 344 ARG B 348 SITE 2 AD1 7 HOH B 600 HOH B 629 HOH B 691 SITE 1 AD2 5 GLY B 313 ALA B 314 GLY B 315 ASP B 316 SITE 2 AD2 5 HOH B 643 CRYST1 50.839 82.159 89.189 90.00 92.69 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019670 0.000000 0.000926 0.00000 SCALE2 0.000000 0.012172 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011225 0.00000