HEADER TRANSFERASE 06-JUN-16 5KCH TITLE SETDB1 IN COMPLEX WITH AN EARLY STAGE, LOW AFFINITY FRAGMENT CANDIDATE TITLE 2 MODELLED AT REDUCED OCCUPANCY INTO WEAK ELECTRON DENSITY COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE-LYSINE N-METHYLTRANSFERASE SETDB1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 196-403; COMPND 5 SYNONYM: ERG-ASSOCIATED PROTEIN WITH SET DOMAIN,ESET,HISTONE H3-K9 COMPND 6 METHYLTRANSFERASE 4,H3-K9-HMTASE 4,LYSINE N-METHYLTRANSFERASE 1E,SET COMPND 7 DOMAIN BIFURCATED 1; COMPND 8 EC: 2.1.1.43; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SETDB1, KIAA0067, KMT1E; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) CODON PLUS; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28-MHL KEYWDS FRAGMENT SCREENING, DIAMOND I04-1 XCHEM, PANDDA, STRUCTURAL GENOMICS, KEYWDS 2 STRUCTURAL GENOMICS CONSORTIUM, SGC, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR W.TEMPEL,R.J.HARDING,P.MADER,E.DOBROVETSKY,J.R.WALKER,P.J.BROWN, AUTHOR 2 M.SCHAPIRA,P.COLLINS,N.PEARCE,J.BRANDAO-NETO,A.DOUANGAMATH,F.VON AUTHOR 3 DELFT,C.BOUNTRA,C.H.ARROWSMITH,A.M.EDWARDS,V.SANTHAKUMAR,STRUCTURAL AUTHOR 4 GENOMICS CONSORTIUM (SGC) REVDAT 4 27-SEP-23 5KCH 1 REMARK REVDAT 3 20-FEB-19 5KCH 1 COMPND REMARK HETNAM FORMUL REVDAT 2 25-JAN-17 5KCH 1 KEYWDS AUTHOR REVDAT 1 27-JUL-16 5KCH 0 JRNL AUTH W.TEMPEL,R.J.HARDING,P.MADER,E.DOBROVETSKY,J.R.WALKER, JRNL AUTH 2 P.J.BROWN,M.SCHAPIRA,C.H.ARROWSMITH,A.M.EDWARDS, JRNL AUTH 3 S.SANTHAKUMAR,STRUCTURAL GENOMICS CONSORTIUM (SGC) JRNL TITL SETDB1 IN COMPLEX WITH AN EARLY STAGE, LOW AFFINITY FRAGMENT JRNL TITL 2 CANDIDATE MODELLED AT REDUCED OCCUPANCY JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 28258 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.215 REMARK 3 FREE R VALUE : 0.258 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1440 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.8381 - 3.6619 1.00 2854 149 0.1743 0.1963 REMARK 3 2 3.6619 - 2.9068 1.00 2730 142 0.1860 0.2302 REMARK 3 3 2.9068 - 2.5394 1.00 2690 151 0.2284 0.2939 REMARK 3 4 2.5394 - 2.3072 1.00 2691 131 0.2571 0.3042 REMARK 3 5 2.3072 - 2.1418 1.00 2637 156 0.2658 0.3126 REMARK 3 6 2.1418 - 2.0156 1.00 2655 136 0.2519 0.2941 REMARK 3 7 2.0156 - 1.9146 1.00 2639 155 0.2330 0.2735 REMARK 3 8 1.9146 - 1.8313 1.00 2658 137 0.2331 0.2865 REMARK 3 9 1.8313 - 1.7608 1.00 2640 135 0.2584 0.3310 REMARK 3 10 1.7608 - 1.7000 1.00 2624 148 0.2752 0.3234 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.54 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.14 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.013 1797 REMARK 3 ANGLE : 1.079 2455 REMARK 3 CHIRALITY : 0.081 264 REMARK 3 PLANARITY : 0.007 320 REMARK 3 DIHEDRAL : 11.242 1068 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A REMARK 3 ORIGIN FOR THE GROUP (A): 24.3406 63.5815 7.5794 REMARK 3 T TENSOR REMARK 3 T11: 0.1514 T22: 0.1453 REMARK 3 T33: 0.1451 T12: 0.0024 REMARK 3 T13: -0.0125 T23: -0.0097 REMARK 3 L TENSOR REMARK 3 L11: 0.4530 L22: 0.8759 REMARK 3 L33: 0.7319 L12: 0.4758 REMARK 3 L13: -0.4058 L23: -0.5743 REMARK 3 S TENSOR REMARK 3 S11: -0.0468 S12: -0.0195 S13: -0.0404 REMARK 3 S21: -0.0674 S22: 0.0105 S23: -0.0129 REMARK 3 S31: 0.0912 S32: -0.0118 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: USERS OF THIS CRYSTAL STRUCTURE: VERIFY REMARK 3 OUR INTEPRETION OF THE ELECTRON DENSITY. AMPLITUDES AND UNMERGED REMARK 3 INTENSITIES ARE INCLUDED WITH THIS DEPOSITION. DIFFRACTION REMARK 3 IMAGES WILL BE DEPOSITED IN A PUBLIC REPOSITORY. GEOMETRY REMARK 3 RESTRAINTS FOR THE FRAGMENT CANDIDATE WERE PREPARED WITH GRADE REMARK 3 AND MODIFIED BY REMOVAL OF PLANE RESTRAINTS FOR ATOMS {C11, C4, REMARK 3 N, C5} AND ATOMS {N, C4, C5, H5}. THE METHYL GROUP OF THE REMARK 3 FRAGMENT CANDIDATE WAS NOT RESOLVED BY ELECTRON DENSITY AND WAS REMARK 3 OMITTED FROM THE MODEL. AMBIGUOUS DIFFERENCE DENSITY SUGGESTS REMARK 3 MORE THAN ONE MAIN CHAIN CONFORMATION FOR RESIDUES 235..239. REMARK 4 REMARK 4 5KCH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000222004. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92819 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.26 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28318 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 43.820 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.12800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 1.15100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 5KCO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG-3350, 0.2M LITHIUM SULFATE, REMARK 280 0.1M BIS-TRIS. TRYPSIN HAD BEEN ADDED TO THE PROTEIN STOCK REMARK 280 SOLUTION., PH 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.98350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.22850 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.80350 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.22850 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.98350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.80350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 179 REMARK 465 HIS A 180 REMARK 465 HIS A 181 REMARK 465 HIS A 182 REMARK 465 HIS A 183 REMARK 465 HIS A 184 REMARK 465 HIS A 185 REMARK 465 SER A 186 REMARK 465 SER A 187 REMARK 465 GLY A 188 REMARK 465 ARG A 189 REMARK 465 LYS A 402 REMARK 465 THR A 403 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 215 CD CE NZ REMARK 470 VAL A 224 CG1 REMARK 470 LYS A 229 CE NZ REMARK 470 LYS A 231 NZ REMARK 470 LYS A 233 CE NZ REMARK 470 ASN A 236 CG OD1 ND2 REMARK 470 LYS A 237 CG CD CE NZ REMARK 470 LYS A 239 CE NZ REMARK 470 LYS A 257 CG CD CE NZ REMARK 470 LYS A 267 CG CD CE NZ REMARK 470 LYS A 269 CD CE NZ REMARK 470 LYS A 288 CG CD CE NZ REMARK 470 LYS A 290 CE NZ REMARK 470 GLU A 325 CG CD OE1 OE2 REMARK 470 ILE A 327 CD1 REMARK 470 LYS A 355 CE NZ REMARK 470 GLU A 359 CD OE1 OE2 REMARK 470 LYS A 364 NZ REMARK 470 ASP A 381 CG OD1 OD2 REMARK 470 ARG A 384 CG CD NE CZ NH1 NH2 REMARK 470 SER A 400 OG REMARK 470 MET A 401 C O CB CG SD CE REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 201 -8.04 94.28 REMARK 500 SER A 201 -7.90 94.16 REMARK 500 LYS A 237 -161.79 -177.93 REMARK 500 ASP A 250 48.62 -90.98 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 6RN A 554 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 551 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 552 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 553 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6RN A 554 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KCO RELATED DB: PDB DBREF 5KCH A 196 403 UNP Q15047 SETB1_HUMAN 196 403 SEQADV 5KCH MET A 179 UNP Q15047 INITIATING METHIONINE SEQADV 5KCH HIS A 180 UNP Q15047 EXPRESSION TAG SEQADV 5KCH HIS A 181 UNP Q15047 EXPRESSION TAG SEQADV 5KCH HIS A 182 UNP Q15047 EXPRESSION TAG SEQADV 5KCH HIS A 183 UNP Q15047 EXPRESSION TAG SEQADV 5KCH HIS A 184 UNP Q15047 EXPRESSION TAG SEQADV 5KCH HIS A 185 UNP Q15047 EXPRESSION TAG SEQADV 5KCH SER A 186 UNP Q15047 EXPRESSION TAG SEQADV 5KCH SER A 187 UNP Q15047 EXPRESSION TAG SEQADV 5KCH GLY A 188 UNP Q15047 EXPRESSION TAG SEQADV 5KCH ARG A 189 UNP Q15047 EXPRESSION TAG SEQADV 5KCH GLU A 190 UNP Q15047 EXPRESSION TAG SEQADV 5KCH ASN A 191 UNP Q15047 EXPRESSION TAG SEQADV 5KCH LEU A 192 UNP Q15047 EXPRESSION TAG SEQADV 5KCH TYR A 193 UNP Q15047 EXPRESSION TAG SEQADV 5KCH PHE A 194 UNP Q15047 EXPRESSION TAG SEQADV 5KCH GLN A 195 UNP Q15047 EXPRESSION TAG SEQRES 1 A 225 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 225 LEU TYR PHE GLN GLY ASP LEU ILE VAL SER MET ARG ILE SEQRES 3 A 225 LEU GLY LYS LYS ARG THR LYS THR TRP HIS LYS GLY THR SEQRES 4 A 225 LEU ILE ALA ILE GLN THR VAL GLY PRO GLY LYS LYS TYR SEQRES 5 A 225 LYS VAL LYS PHE ASP ASN LYS GLY LYS SER LEU LEU SER SEQRES 6 A 225 GLY ASN HIS ILE ALA TYR ASP TYR HIS PRO PRO ALA ASP SEQRES 7 A 225 LYS LEU TYR VAL GLY SER ARG VAL VAL ALA LYS TYR LYS SEQRES 8 A 225 ASP GLY ASN GLN VAL TRP LEU TYR ALA GLY ILE VAL ALA SEQRES 9 A 225 GLU THR PRO ASN VAL LYS ASN LYS LEU ARG PHE LEU ILE SEQRES 10 A 225 PHE PHE ASP ASP GLY TYR ALA SER TYR VAL THR GLN SER SEQRES 11 A 225 GLU LEU TYR PRO ILE CYS ARG PRO LEU LYS LYS THR TRP SEQRES 12 A 225 GLU ASP ILE GLU ASP ILE SER CYS ARG ASP PHE ILE GLU SEQRES 13 A 225 GLU TYR VAL THR ALA TYR PRO ASN ARG PRO MET VAL LEU SEQRES 14 A 225 LEU LYS SER GLY GLN LEU ILE LYS THR GLU TRP GLU GLY SEQRES 15 A 225 THR TRP TRP LYS SER ARG VAL GLU GLU VAL ASP GLY SER SEQRES 16 A 225 LEU VAL ARG ILE LEU PHE LEU ASP ASP LYS ARG CYS GLU SEQRES 17 A 225 TRP ILE TYR ARG GLY SER THR ARG LEU GLU PRO MET PHE SEQRES 18 A 225 SER MET LYS THR HET UNX A 501 1 HET UNX A 502 1 HET UNX A 503 1 HET UNX A 504 1 HET UNX A 505 1 HET UNX A 506 1 HET UNX A 507 1 HET UNX A 508 1 HET UNX A 509 1 HET UNX A 510 1 HET UNX A 511 1 HET UNX A 512 1 HET UNX A 513 1 HET UNX A 514 1 HET UNX A 515 1 HET UNX A 516 1 HET UNX A 517 1 HET UNX A 518 1 HET UNX A 519 1 HET UNX A 520 1 HET UNX A 521 1 HET UNX A 522 1 HET UNX A 523 1 HET UNX A 524 1 HET UNX A 525 1 HET UNX A 526 1 HET UNX A 527 1 HET UNX A 528 1 HET UNX A 529 1 HET UNX A 530 1 HET UNX A 531 1 HET UNX A 532 1 HET UNX A 533 1 HET UNX A 534 1 HET UNX A 535 1 HET UNX A 536 1 HET UNX A 537 1 HET UNX A 538 1 HET UNX A 539 1 HET UNX A 540 1 HET UNX A 541 1 HET UNX A 542 1 HET UNX A 543 1 HET UNX A 544 1 HET UNX A 545 1 HET UNX A 546 1 HET UNX A 547 1 HET UNX A 548 1 HET UNX A 549 1 HET UNX A 550 1 HET DMS A 551 4 HET SO4 A 552 5 HET SO4 A 553 5 HET 6RN A 554 15 HETNAM UNX UNKNOWN ATOM OR ION HETNAM DMS DIMETHYL SULFOXIDE HETNAM SO4 SULFATE ION HETNAM 6RN 4-METHOXY-N-[(PYRIDIN-2-YL)METHYL]ANILINE FORMUL 2 UNX 50(X) FORMUL 52 DMS C2 H6 O S FORMUL 53 SO4 2(O4 S 2-) FORMUL 55 6RN C13 H14 N2 O FORMUL 56 HOH *115(H2 O) HELIX 1 AA1 SER A 243 ASN A 245 5 3 HELIX 2 AA2 PRO A 254 LEU A 258 5 5 HELIX 3 AA3 THR A 306 SER A 308 5 3 HELIX 4 AA4 LYS A 319 ILE A 324 5 6 HELIX 5 AA5 ASP A 326 TYR A 340 1 15 HELIX 6 AA6 LEU A 395 MET A 401 1 7 SHEET 1 AA1 4 ASN A 191 LEU A 192 0 SHEET 2 AA1 4 TRP A 213 VAL A 224 -1 O ILE A 221 N LEU A 192 SHEET 3 AA1 4 GLY A 227 PHE A 234 -1 O LYS A 229 N GLN A 222 SHEET 4 AA1 4 LYS A 239 LEU A 242 -1 O LEU A 242 N TYR A 230 SHEET 1 AA2 4 ASN A 191 LEU A 192 0 SHEET 2 AA2 4 TRP A 213 VAL A 224 -1 O ILE A 221 N LEU A 192 SHEET 3 AA2 4 ARG A 203 LYS A 207 -1 N GLY A 206 O HIS A 214 SHEET 4 AA2 4 ILE A 247 ALA A 248 -1 O ALA A 248 N LEU A 205 SHEET 1 AA3 2 PHE A 194 GLN A 195 0 SHEET 2 AA3 2 LEU A 198 ILE A 199 -1 O LEU A 198 N GLN A 195 SHEET 1 AA4 5 ALA A 302 VAL A 305 0 SHEET 2 AA4 5 PHE A 293 PHE A 297 -1 N ILE A 295 O SER A 303 SHEET 3 AA4 5 GLN A 273 GLU A 283 -1 N ALA A 282 O LEU A 294 SHEET 4 AA4 5 ARG A 263 ASP A 270 -1 N ASP A 270 O GLN A 273 SHEET 5 AA4 5 LEU A 310 PRO A 312 -1 O TYR A 311 N VAL A 265 SHEET 1 AA5 4 LEU A 353 TRP A 358 0 SHEET 2 AA5 4 THR A 361 ASP A 371 -1 O TRP A 363 N THR A 356 SHEET 3 AA5 4 LEU A 374 PHE A 379 -1 O LEU A 378 N ARG A 366 SHEET 4 AA5 4 ARG A 384 TYR A 389 -1 O GLU A 386 N ILE A 377 CISPEP 1 TYR A 340 PRO A 341 0 10.12 SITE 1 AC1 3 LYS A 207 LYS A 211 HOH A 641 SITE 1 AC2 5 HIS A 214 LYS A 215 HOH A 608 HOH A 616 SITE 2 AC2 5 HOH A 619 SITE 1 AC3 5 ARG A 209 TRP A 363 LYS A 364 ASP A 381 SITE 2 AC3 5 HOH A 611 SITE 1 AC4 9 PHE A 296 PHE A 297 GLY A 300 TYR A 301 SITE 2 AC4 9 SER A 328 CYS A 329 PHE A 332 SER A 392 SITE 3 AC4 9 HOH A 676 CRYST1 55.967 63.607 70.457 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017868 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015722 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014193 0.00000