HEADER TRANSCRIPTION FACTOR/DNA 09-JUN-16 5KE9 TITLE MOUSE KLF4 E446P ZNF1-3 AND TPG/CPA SEQUENCE DNA COMPLEX STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: KRUEPPEL-LIKE FACTOR 4; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 396-483; COMPND 5 SYNONYM: EPITHELIAL ZINC FINGER PROTEIN EZF,GUT-ENRICHED KRUEPPEL- COMPND 6 LIKE FACTOR; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: DNA (5'-D(*GP*AP*GP*GP*TP*GP*TP*GP*GP*C)-3'); COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES; COMPND 13 MOL_ID: 3; COMPND 14 MOLECULE: DNA (5'-D(*GP*CP*CP*AP*CP*AP*CP*CP*TP*C)-3'); COMPND 15 CHAIN: C; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: KLF4, EZF, GKLF, ZIE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) CODON PLUS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX-6P-1; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PXC1328; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630 KEYWDS KLF4, ZINC FINGER, KRUPPEL-LIKE FACTORS, TRANSCRIPTION FACTOR-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.HASHIMOTO,X.CHENG REVDAT 6 27-SEP-23 5KE9 1 REMARK REVDAT 5 25-DEC-19 5KE9 1 REMARK REVDAT 4 20-SEP-17 5KE9 1 REMARK REVDAT 3 14-DEC-16 5KE9 1 JRNL REVDAT 2 21-SEP-16 5KE9 1 JRNL REVDAT 1 14-SEP-16 5KE9 0 JRNL AUTH H.HASHIMOTO,D.WANG,A.N.STEVES,P.JIN,R.M.BLUMENTHAL,X.ZHANG, JRNL AUTH 2 X.CHENG JRNL TITL DISTINCTIVE KLF4 MUTANTS DETERMINE PREFERENCE FOR DNA JRNL TITL 2 METHYLATION STATUS. JRNL REF NUCLEIC ACIDS RES. V. 44 10177 2016 JRNL REFN ESSN 1362-4962 JRNL PMID 27596594 JRNL DOI 10.1093/NAR/GKW774 REMARK 2 REMARK 2 RESOLUTION. 2.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_2400: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 7915 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.217 REMARK 3 R VALUE (WORKING SET) : 0.214 REMARK 3 FREE R VALUE : 0.272 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 395 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.2367 - 3.3670 0.99 2619 138 0.1735 0.2473 REMARK 3 2 3.3670 - 2.6734 0.99 2469 129 0.2854 0.3026 REMARK 3 3 2.6734 - 2.3358 1.00 2432 128 0.3133 0.3533 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 1217 REMARK 3 ANGLE : 0.561 1705 REMARK 3 CHIRALITY : 0.037 174 REMARK 3 PLANARITY : 0.002 149 REMARK 3 DIHEDRAL : 17.993 629 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 396:406) REMARK 3 ORIGIN FOR THE GROUP (A): 4.9678 -6.9198 -6.1013 REMARK 3 T TENSOR REMARK 3 T11: 0.6479 T22: 0.8337 REMARK 3 T33: 1.2607 T12: -0.2184 REMARK 3 T13: 0.2028 T23: -0.2101 REMARK 3 L TENSOR REMARK 3 L11: 3.8678 L22: 2.4538 REMARK 3 L33: 5.8493 L12: -2.6796 REMARK 3 L13: -1.2566 L23: -0.5365 REMARK 3 S TENSOR REMARK 3 S11: 0.1566 S12: 0.2214 S13: 1.8156 REMARK 3 S21: 0.3128 S22: 0.2140 S23: 0.5014 REMARK 3 S31: -0.3953 S32: 1.1969 S33: -0.2535 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 407:426) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7421 -11.7055 1.2931 REMARK 3 T TENSOR REMARK 3 T11: 0.6583 T22: 0.6993 REMARK 3 T33: 0.7126 T12: 0.1597 REMARK 3 T13: -0.0890 T23: -0.2196 REMARK 3 L TENSOR REMARK 3 L11: 3.4137 L22: 6.7932 REMARK 3 L33: 4.5109 L12: -4.6689 REMARK 3 L13: -3.3909 L23: 4.3458 REMARK 3 S TENSOR REMARK 3 S11: -0.7902 S12: -0.6348 S13: 0.8167 REMARK 3 S21: 0.2154 S22: 1.5438 S23: -1.4637 REMARK 3 S31: 0.6848 S32: 0.6494 S33: -0.7926 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 427:452) REMARK 3 ORIGIN FOR THE GROUP (A): -12.5443 -22.1447 10.3820 REMARK 3 T TENSOR REMARK 3 T11: 0.4096 T22: 0.6323 REMARK 3 T33: 0.4951 T12: 0.1161 REMARK 3 T13: 0.0186 T23: 0.1309 REMARK 3 L TENSOR REMARK 3 L11: 8.1935 L22: 7.4983 REMARK 3 L33: 7.0294 L12: -0.1243 REMARK 3 L13: 0.2782 L23: 0.5297 REMARK 3 S TENSOR REMARK 3 S11: 0.4207 S12: 0.2888 S13: -0.0025 REMARK 3 S21: -0.0794 S22: -0.1221 S23: 1.0148 REMARK 3 S31: -0.4522 S32: -0.8315 S33: -0.3221 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 453:483) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3200 -38.0415 19.2480 REMARK 3 T TENSOR REMARK 3 T11: 0.5111 T22: 0.5808 REMARK 3 T33: 0.5275 T12: -0.0594 REMARK 3 T13: 0.0624 T23: 0.0353 REMARK 3 L TENSOR REMARK 3 L11: 8.9085 L22: 4.8879 REMARK 3 L33: 6.4517 L12: -4.7533 REMARK 3 L13: 5.4144 L23: -2.4760 REMARK 3 S TENSOR REMARK 3 S11: 0.2022 S12: -0.4745 S13: -0.9855 REMARK 3 S21: 0.3028 S22: 0.1463 S23: 0.5372 REMARK 3 S31: 0.5106 S32: -0.2176 S33: -0.3407 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN B AND RESID 1:10) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0697 -23.9027 8.9734 REMARK 3 T TENSOR REMARK 3 T11: 0.4006 T22: 0.4373 REMARK 3 T33: 0.3098 T12: 0.0267 REMARK 3 T13: -0.0313 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 6.0544 L22: 3.8787 REMARK 3 L33: 8.9455 L12: -1.4691 REMARK 3 L13: -2.8097 L23: 2.2800 REMARK 3 S TENSOR REMARK 3 S11: 0.6736 S12: 0.1179 S13: 0.0809 REMARK 3 S21: -0.2889 S22: -0.2733 S23: -0.1354 REMARK 3 S31: -0.7478 S32: 0.2797 S33: -0.4197 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN C AND RESID 1:10) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1713 -25.2432 9.9675 REMARK 3 T TENSOR REMARK 3 T11: 0.4098 T22: 0.5012 REMARK 3 T33: 0.3791 T12: -0.0264 REMARK 3 T13: 0.0226 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 3.9970 L22: 4.3644 REMARK 3 L33: 4.6595 L12: -0.9586 REMARK 3 L13: -0.1208 L23: -0.8923 REMARK 3 S TENSOR REMARK 3 S11: 0.5354 S12: -0.0532 S13: -0.0934 REMARK 3 S21: -0.0400 S22: 0.0692 S23: 0.0627 REMARK 3 S31: 0.1449 S32: -0.2503 S33: -0.5909 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5KE9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 10-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000222054. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7979 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.336 REMARK 200 RESOLUTION RANGE LOW (A) : 25.235 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.42 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 10.00 REMARK 200 R MERGE FOR SHELL (I) : 0.88700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.060 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4M9E REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.88 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL PH8.5 , 0.25M NACL AND REMARK 280 20% POLYETHYLENE GLYCOL 8000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 65.29700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 25.72000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 25.72000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 97.94550 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 25.72000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 25.72000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.64850 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 25.72000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 25.72000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 97.94550 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 25.72000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 25.72000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 32.64850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 65.29700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 391 REMARK 465 PRO A 392 REMARK 465 LEU A 393 REMARK 465 GLY A 394 REMARK 465 SER A 395 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 402 SG REMARK 620 2 CYS A 407 SG 94.2 REMARK 620 3 HIS A 420 NE2 125.2 88.8 REMARK 620 4 HIS A 424 NE2 132.7 117.6 91.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 432 SG REMARK 620 2 CYS A 437 SG 118.4 REMARK 620 3 HIS A 450 NE2 116.0 95.8 REMARK 620 4 HIS A 454 NE2 113.6 112.6 97.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 462 SG REMARK 620 2 CYS A 465 SG 108.9 REMARK 620 3 HIS A 478 NE2 113.8 88.9 REMARK 620 4 HIS A 482 NE2 104.2 125.2 115.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KE6 RELATED DB: PDB REMARK 900 RELATED ID: 5KE7 RELATED DB: PDB REMARK 900 RELATED ID: 5KE8 RELATED DB: PDB REMARK 900 RELATED ID: 5KEA RELATED DB: PDB REMARK 900 RELATED ID: 5KEB RELATED DB: PDB DBREF 5KE9 A 396 483 UNP Q60793 KLF4_MOUSE 396 483 DBREF 5KE9 B 1 10 PDB 5KE9 5KE9 1 10 DBREF 5KE9 C 1 10 PDB 5KE9 5KE9 1 10 SEQADV 5KE9 GLY A 391 UNP Q60793 EXPRESSION TAG SEQADV 5KE9 PRO A 392 UNP Q60793 EXPRESSION TAG SEQADV 5KE9 LEU A 393 UNP Q60793 EXPRESSION TAG SEQADV 5KE9 GLY A 394 UNP Q60793 EXPRESSION TAG SEQADV 5KE9 SER A 395 UNP Q60793 EXPRESSION TAG SEQADV 5KE9 PRO A 446 UNP Q60793 GLU 446 ENGINEERED MUTATION SEQRES 1 A 93 GLY PRO LEU GLY SER ARG THR ALA THR HIS THR CYS ASP SEQRES 2 A 93 TYR ALA GLY CYS GLY LYS THR TYR THR LYS SER SER HIS SEQRES 3 A 93 LEU LYS ALA HIS LEU ARG THR HIS THR GLY GLU LYS PRO SEQRES 4 A 93 TYR HIS CYS ASP TRP ASP GLY CYS GLY TRP LYS PHE ALA SEQRES 5 A 93 ARG SER ASP PRO LEU THR ARG HIS TYR ARG LYS HIS THR SEQRES 6 A 93 GLY HIS ARG PRO PHE GLN CYS GLN LYS CYS ASP ARG ALA SEQRES 7 A 93 PHE SER ARG SER ASP HIS LEU ALA LEU HIS MET LYS ARG SEQRES 8 A 93 HIS PHE SEQRES 1 B 10 DG DA DG DG DT DG DT DG DG DC SEQRES 1 C 10 DG DC DC DA DC DA DC DC DT DC HET ZN A 501 1 HET ZN A 502 1 HET ZN A 503 1 HETNAM ZN ZINC ION FORMUL 4 ZN 3(ZN 2+) FORMUL 7 HOH *14(H2 O) HELIX 1 AA1 LYS A 413 GLY A 426 1 14 HELIX 2 AA2 SER A 444 GLY A 456 1 13 HELIX 3 AA3 ARG A 471 LYS A 480 1 10 HELIX 4 AA4 ARG A 481 PHE A 483 5 3 SHEET 1 AA1 2 HIS A 400 THR A 401 0 SHEET 2 AA1 2 THR A 410 TYR A 411 -1 O TYR A 411 N HIS A 400 SHEET 1 AA2 2 TYR A 430 HIS A 431 0 SHEET 2 AA2 2 LYS A 440 PHE A 441 -1 O PHE A 441 N TYR A 430 SHEET 1 AA3 2 PHE A 460 GLN A 461 0 SHEET 2 AA3 2 ALA A 468 PHE A 469 -1 O PHE A 469 N PHE A 460 LINK SG CYS A 402 ZN ZN A 503 1555 1555 2.30 LINK SG CYS A 407 ZN ZN A 503 1555 1555 2.32 LINK NE2 HIS A 420 ZN ZN A 503 1555 1555 2.03 LINK NE2 HIS A 424 ZN ZN A 503 1555 1555 2.04 LINK SG CYS A 432 ZN ZN A 502 1555 1555 2.33 LINK SG CYS A 437 ZN ZN A 502 1555 1555 2.22 LINK NE2 HIS A 450 ZN ZN A 502 1555 1555 2.03 LINK NE2 HIS A 454 ZN ZN A 502 1555 1555 2.03 LINK SG CYS A 462 ZN ZN A 501 1555 1555 2.28 LINK SG CYS A 465 ZN ZN A 501 1555 1555 2.27 LINK NE2 HIS A 478 ZN ZN A 501 1555 1555 2.05 LINK NE2 HIS A 482 ZN ZN A 501 1555 1555 2.04 SITE 1 AC1 4 CYS A 462 CYS A 465 HIS A 478 HIS A 482 SITE 1 AC2 4 CYS A 432 CYS A 437 HIS A 450 HIS A 454 SITE 1 AC3 4 CYS A 402 CYS A 407 HIS A 420 HIS A 424 CRYST1 51.440 51.440 130.594 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019440 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019440 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007657 0.00000