data_5KES # _entry.id 5KES # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5KES pdb_00005kes 10.2210/pdb5kes/pdb WWPDB D_1000219248 ? ? BMRB 30102 ? 10.13018/BMR30102 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-10-05 2 'Structure model' 1 1 2017-09-20 3 'Structure model' 1 2 2020-01-08 4 'Structure model' 1 3 2023-06-14 5 'Structure model' 1 4 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 2 'Structure model' 'Structure summary' 3 3 'Structure model' 'Author supporting evidence' 4 3 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' Other 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' entity 2 2 'Structure model' pdbx_audit_support 3 3 'Structure model' pdbx_audit_support 4 3 'Structure model' pdbx_nmr_software 5 3 'Structure model' pdbx_nmr_spectrometer 6 4 'Structure model' database_2 7 4 'Structure model' pdbx_database_status 8 5 'Structure model' chem_comp_atom 9 5 'Structure model' chem_comp_bond 10 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_entity.pdbx_number_of_molecules' 2 2 'Structure model' '_pdbx_audit_support.funding_organization' 3 3 'Structure model' '_pdbx_audit_support.funding_organization' 4 3 'Structure model' '_pdbx_nmr_software.name' 5 3 'Structure model' '_pdbx_nmr_spectrometer.model' 6 4 'Structure model' '_database_2.pdbx_DOI' 7 4 'Structure model' '_database_2.pdbx_database_accession' 8 4 'Structure model' '_pdbx_database_status.status_code_nmr_data' 9 5 'Structure model' '_database_2.pdbx_DOI' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5KES _pdbx_database_status.recvd_initial_deposition_date 2016-06-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 30102 _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Trempe, J.-F.' 1 'Ratcliffe, C.' 2 'Veverka, V.' 3 'Saskova, K.' 4 'Gehring, K.' 5 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Sci Rep' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2045-2322 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 6 _citation.language ? _citation.page_first 33671 _citation.page_last 33671 _citation.title 'Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/srep33671 _citation.pdbx_database_id_PubMed 27646017 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Trempe, J.F.' 1 ? primary 'Saskova, K.G.' 2 ? primary 'Siva, M.' 3 ? primary 'Ratcliffe, C.D.' 4 ? primary 'Veverka, V.' 5 ? primary 'Hoegl, A.' 6 ? primary 'Menade, M.' 7 ? primary 'Feng, X.' 8 ? primary 'Shenker, S.' 9 ? primary 'Svoboda, M.' 10 ? primary 'Kozisek, M.' 11 ? primary 'Konvalinka, J.' 12 ? primary 'Gehring, K.' 13 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'DNA damage-inducible protein 1' _entity.formula_weight 13309.941 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'residues 86-196' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'v-SNARE-master 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSATLSDEAFIEQFRQELLNNQMLRSQLILQIPGLNDLVNDPLLFRERLGPLILQRRYGGYNTAMNPFGIPQDEYTR LMANPDDPDNKKRIAELLDQQAIDEQLRNAIEYTPE ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSATLSDEAFIEQFRQELLNNQMLRSQLILQIPGLNDLVNDPLLFRERLGPLILQRRYGGYNTAMNPFGIPQDEYTR LMANPDDPDNKKRIAELLDQQAIDEQLRNAIEYTPE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 ALA n 1 7 THR n 1 8 LEU n 1 9 SER n 1 10 ASP n 1 11 GLU n 1 12 ALA n 1 13 PHE n 1 14 ILE n 1 15 GLU n 1 16 GLN n 1 17 PHE n 1 18 ARG n 1 19 GLN n 1 20 GLU n 1 21 LEU n 1 22 LEU n 1 23 ASN n 1 24 ASN n 1 25 GLN n 1 26 MET n 1 27 LEU n 1 28 ARG n 1 29 SER n 1 30 GLN n 1 31 LEU n 1 32 ILE n 1 33 LEU n 1 34 GLN n 1 35 ILE n 1 36 PRO n 1 37 GLY n 1 38 LEU n 1 39 ASN n 1 40 ASP n 1 41 LEU n 1 42 VAL n 1 43 ASN n 1 44 ASP n 1 45 PRO n 1 46 LEU n 1 47 LEU n 1 48 PHE n 1 49 ARG n 1 50 GLU n 1 51 ARG n 1 52 LEU n 1 53 GLY n 1 54 PRO n 1 55 LEU n 1 56 ILE n 1 57 LEU n 1 58 GLN n 1 59 ARG n 1 60 ARG n 1 61 TYR n 1 62 GLY n 1 63 GLY n 1 64 TYR n 1 65 ASN n 1 66 THR n 1 67 ALA n 1 68 MET n 1 69 ASN n 1 70 PRO n 1 71 PHE n 1 72 GLY n 1 73 ILE n 1 74 PRO n 1 75 GLN n 1 76 ASP n 1 77 GLU n 1 78 TYR n 1 79 THR n 1 80 ARG n 1 81 LEU n 1 82 MET n 1 83 ALA n 1 84 ASN n 1 85 PRO n 1 86 ASP n 1 87 ASP n 1 88 PRO n 1 89 ASP n 1 90 ASN n 1 91 LYS n 1 92 LYS n 1 93 ARG n 1 94 ILE n 1 95 ALA n 1 96 GLU n 1 97 LEU n 1 98 LEU n 1 99 ASP n 1 100 GLN n 1 101 GLN n 1 102 ALA n 1 103 ILE n 1 104 ASP n 1 105 GLU n 1 106 GLN n 1 107 LEU n 1 108 ARG n 1 109 ASN n 1 110 ALA n 1 111 ILE n 1 112 GLU n 1 113 TYR n 1 114 THR n 1 115 PRO n 1 116 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 116 _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DDI1, VSM1, YER143W' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 204508 / S288c' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli K-12' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 83333 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain K12 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-6P1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 81 81 GLY GLY A . n A 1 2 PRO 2 82 82 PRO PRO A . n A 1 3 LEU 3 83 83 LEU LEU A . n A 1 4 GLY 4 84 84 GLY GLY A . n A 1 5 SER 5 85 85 SER SER A . n A 1 6 ALA 6 86 86 ALA ALA A . n A 1 7 THR 7 87 87 THR THR A . n A 1 8 LEU 8 88 88 LEU LEU A . n A 1 9 SER 9 89 89 SER SER A . n A 1 10 ASP 10 90 90 ASP ASP A . n A 1 11 GLU 11 91 91 GLU GLU A . n A 1 12 ALA 12 92 92 ALA ALA A . n A 1 13 PHE 13 93 93 PHE PHE A . n A 1 14 ILE 14 94 94 ILE ILE A . n A 1 15 GLU 15 95 95 GLU GLU A . n A 1 16 GLN 16 96 96 GLN GLN A . n A 1 17 PHE 17 97 97 PHE PHE A . n A 1 18 ARG 18 98 98 ARG ARG A . n A 1 19 GLN 19 99 99 GLN GLN A . n A 1 20 GLU 20 100 100 GLU GLU A . n A 1 21 LEU 21 101 101 LEU LEU A . n A 1 22 LEU 22 102 102 LEU LEU A . n A 1 23 ASN 23 103 103 ASN ASN A . n A 1 24 ASN 24 104 104 ASN ASN A . n A 1 25 GLN 25 105 105 GLN GLN A . n A 1 26 MET 26 106 106 MET MET A . n A 1 27 LEU 27 107 107 LEU LEU A . n A 1 28 ARG 28 108 108 ARG ARG A . n A 1 29 SER 29 109 109 SER SER A . n A 1 30 GLN 30 110 110 GLN GLN A . n A 1 31 LEU 31 111 111 LEU LEU A . n A 1 32 ILE 32 112 112 ILE ILE A . n A 1 33 LEU 33 113 113 LEU LEU A . n A 1 34 GLN 34 114 114 GLN GLN A . n A 1 35 ILE 35 115 115 ILE ILE A . n A 1 36 PRO 36 116 116 PRO PRO A . n A 1 37 GLY 37 117 117 GLY GLY A . n A 1 38 LEU 38 118 118 LEU LEU A . n A 1 39 ASN 39 119 119 ASN ASN A . n A 1 40 ASP 40 120 120 ASP ASP A . n A 1 41 LEU 41 121 121 LEU LEU A . n A 1 42 VAL 42 122 122 VAL VAL A . n A 1 43 ASN 43 123 123 ASN ASN A . n A 1 44 ASP 44 124 124 ASP ASP A . n A 1 45 PRO 45 125 125 PRO PRO A . n A 1 46 LEU 46 126 126 LEU LEU A . n A 1 47 LEU 47 127 127 LEU LEU A . n A 1 48 PHE 48 128 128 PHE PHE A . n A 1 49 ARG 49 129 129 ARG ARG A . n A 1 50 GLU 50 130 130 GLU GLU A . n A 1 51 ARG 51 131 131 ARG ARG A . n A 1 52 LEU 52 132 132 LEU LEU A . n A 1 53 GLY 53 133 133 GLY GLY A . n A 1 54 PRO 54 134 134 PRO PRO A . n A 1 55 LEU 55 135 135 LEU LEU A . n A 1 56 ILE 56 136 136 ILE ILE A . n A 1 57 LEU 57 137 137 LEU LEU A . n A 1 58 GLN 58 138 138 GLN GLN A . n A 1 59 ARG 59 139 139 ARG ARG A . n A 1 60 ARG 60 140 140 ARG ARG A . n A 1 61 TYR 61 141 141 TYR TYR A . n A 1 62 GLY 62 142 142 GLY GLY A . n A 1 63 GLY 63 143 143 GLY GLY A . n A 1 64 TYR 64 144 144 TYR TYR A . n A 1 65 ASN 65 145 145 ASN ASN A . n A 1 66 THR 66 146 146 THR THR A . n A 1 67 ALA 67 147 147 ALA ALA A . n A 1 68 MET 68 148 148 MET MET A . n A 1 69 ASN 69 149 149 ASN ASN A . n A 1 70 PRO 70 150 150 PRO PRO A . n A 1 71 PHE 71 151 151 PHE PHE A . n A 1 72 GLY 72 152 152 GLY GLY A . n A 1 73 ILE 73 153 153 ILE ILE A . n A 1 74 PRO 74 154 154 PRO PRO A . n A 1 75 GLN 75 155 155 GLN GLN A . n A 1 76 ASP 76 156 156 ASP ASP A . n A 1 77 GLU 77 157 157 GLU GLU A . n A 1 78 TYR 78 158 158 TYR TYR A . n A 1 79 THR 79 159 159 THR THR A . n A 1 80 ARG 80 160 160 ARG ARG A . n A 1 81 LEU 81 161 161 LEU LEU A . n A 1 82 MET 82 162 162 MET MET A . n A 1 83 ALA 83 163 163 ALA ALA A . n A 1 84 ASN 84 164 164 ASN ASN A . n A 1 85 PRO 85 165 165 PRO PRO A . n A 1 86 ASP 86 166 166 ASP ASP A . n A 1 87 ASP 87 167 167 ASP ASP A . n A 1 88 PRO 88 168 168 PRO PRO A . n A 1 89 ASP 89 169 169 ASP ASP A . n A 1 90 ASN 90 170 170 ASN ASN A . n A 1 91 LYS 91 171 171 LYS LYS A . n A 1 92 LYS 92 172 172 LYS LYS A . n A 1 93 ARG 93 173 173 ARG ARG A . n A 1 94 ILE 94 174 174 ILE ILE A . n A 1 95 ALA 95 175 175 ALA ALA A . n A 1 96 GLU 96 176 176 GLU GLU A . n A 1 97 LEU 97 177 177 LEU LEU A . n A 1 98 LEU 98 178 178 LEU LEU A . n A 1 99 ASP 99 179 179 ASP ASP A . n A 1 100 GLN 100 180 180 GLN GLN A . n A 1 101 GLN 101 181 181 GLN GLN A . n A 1 102 ALA 102 182 182 ALA ALA A . n A 1 103 ILE 103 183 183 ILE ILE A . n A 1 104 ASP 104 184 184 ASP ASP A . n A 1 105 GLU 105 185 185 GLU GLU A . n A 1 106 GLN 106 186 186 GLN GLN A . n A 1 107 LEU 107 187 187 LEU LEU A . n A 1 108 ARG 108 188 188 ARG ARG A . n A 1 109 ASN 109 189 189 ASN ASN A . n A 1 110 ALA 110 190 190 ALA ALA A . n A 1 111 ILE 111 191 191 ILE ILE A . n A 1 112 GLU 112 192 192 GLU GLU A . n A 1 113 TYR 113 193 193 TYR TYR A . n A 1 114 THR 114 194 194 THR THR A . n A 1 115 PRO 115 195 195 PRO PRO A . n A 1 116 GLU 116 196 196 GLU GLU A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5KES _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5KES _struct.title 'Solution structure of the yeast Ddi1 HDD domain' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5KES _struct_keywords.text 'helical bundles, DNA repair, UNKNOWN FUNCTION' _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DDI1_YEAST _struct_ref.pdbx_db_accession P40087 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;ATLSDEAFIEQFRQELLNNQMLRSQLILQIPGLNDLVNDPLLFRERLGPLILQRRYGGYNTAMNPFGIPQDEYTRLMANP DDPDNKKRIAELLDQQAIDEQLRNAIEYTPE ; _struct_ref.pdbx_align_begin 86 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5KES _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 116 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P40087 _struct_ref_seq.db_align_beg 86 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 196 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 86 _struct_ref_seq.pdbx_auth_seq_align_end 196 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 5KES GLY A 1 ? UNP P40087 ? ? 'expression tag' 81 1 1 5KES PRO A 2 ? UNP P40087 ? ? 'expression tag' 82 2 1 5KES LEU A 3 ? UNP P40087 ? ? 'expression tag' 83 3 1 5KES GLY A 4 ? UNP P40087 ? ? 'expression tag' 84 4 1 5KES SER A 5 ? UNP P40087 ? ? 'expression tag' 85 5 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 9490 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 9 ? ASN A 24 ? SER A 89 ASN A 104 1 ? 16 HELX_P HELX_P2 AA2 ASN A 24 ? LEU A 33 ? ASN A 104 LEU A 113 1 ? 10 HELX_P HELX_P3 AA3 GLY A 37 ? ASN A 43 ? GLY A 117 ASN A 123 1 ? 7 HELX_P HELX_P4 AA4 ASP A 44 ? LEU A 52 ? ASP A 124 LEU A 132 1 ? 9 HELX_P HELX_P5 AA5 LEU A 52 ? TYR A 61 ? LEU A 132 TYR A 141 1 ? 10 HELX_P HELX_P6 AA6 PRO A 74 ? ASN A 84 ? PRO A 154 ASN A 164 1 ? 11 HELX_P HELX_P7 AA7 ASP A 87 ? ALA A 110 ? ASP A 167 ALA A 190 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 8 HH12 A ARG 98 ? ? HE21 A GLN 99 ? ? 1.34 2 13 HH12 A ARG 140 ? ? HH A TYR 141 ? ? 1.32 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 85 ? ? -165.62 35.09 2 1 THR A 87 ? ? -173.07 35.66 3 1 SER A 89 ? ? -59.72 -171.72 4 1 ALA A 147 ? ? -168.15 35.32 5 1 PRO A 154 ? ? -38.19 127.53 6 1 ASN A 164 ? ? -163.32 68.29 7 1 ALA A 190 ? ? 44.64 88.00 8 1 ILE A 191 ? ? -66.43 2.77 9 1 TYR A 193 ? ? -80.70 35.94 10 1 THR A 194 ? ? -153.56 75.18 11 2 LEU A 83 ? ? -48.09 178.13 12 2 SER A 85 ? ? -165.31 105.98 13 2 THR A 87 ? ? -166.32 80.44 14 2 SER A 89 ? ? -55.48 179.38 15 2 PRO A 134 ? ? -38.84 -25.06 16 2 TYR A 144 ? ? 40.65 22.95 17 2 THR A 146 ? ? -164.38 -103.96 18 2 PRO A 150 ? ? -37.87 -25.35 19 2 PRO A 154 ? ? -37.75 125.42 20 2 ASN A 164 ? ? -162.09 69.97 21 2 ALA A 190 ? ? 40.11 -90.70 22 2 GLU A 192 ? ? 54.55 -167.06 23 2 TYR A 193 ? ? -160.88 79.07 24 2 THR A 194 ? ? -167.05 61.71 25 3 PRO A 82 ? ? -48.87 -176.00 26 3 ALA A 86 ? ? -163.26 -7.77 27 3 THR A 87 ? ? -76.61 37.70 28 3 LEU A 88 ? ? -68.83 96.74 29 3 SER A 89 ? ? -57.70 -179.48 30 3 TYR A 144 ? ? -53.48 91.74 31 3 ALA A 147 ? ? -167.55 -4.29 32 3 MET A 148 ? ? 53.57 104.72 33 3 PRO A 154 ? ? -38.17 123.15 34 3 ASN A 164 ? ? -160.62 65.37 35 3 ALA A 190 ? ? -53.95 -168.57 36 3 ILE A 191 ? ? 53.76 104.56 37 3 GLU A 192 ? ? 51.82 102.96 38 3 TYR A 193 ? ? -160.06 -21.79 39 4 PRO A 82 ? ? -48.20 -174.37 40 4 LEU A 83 ? ? -165.86 4.91 41 4 ASN A 145 ? ? -160.99 98.18 42 4 ALA A 147 ? ? -170.10 -51.08 43 4 MET A 148 ? ? 65.33 -7.09 44 4 ASN A 149 ? ? 46.82 85.69 45 4 PRO A 154 ? ? -37.34 127.33 46 4 ASN A 164 ? ? -160.71 71.15 47 4 ALA A 190 ? ? 55.08 170.35 48 4 ILE A 191 ? ? 47.62 98.21 49 5 SER A 85 ? ? 52.82 103.72 50 5 ALA A 86 ? ? 59.92 77.49 51 5 SER A 89 ? ? -56.94 178.95 52 5 PRO A 134 ? ? -38.93 -26.59 53 5 TYR A 144 ? ? -71.93 -140.06 54 5 ASN A 145 ? ? 60.78 -74.51 55 5 THR A 146 ? ? -58.83 -150.89 56 5 PRO A 150 ? ? -69.70 19.82 57 5 PRO A 154 ? ? -39.58 126.20 58 5 ASN A 164 ? ? -155.41 73.01 59 5 GLU A 192 ? ? -160.59 -76.02 60 5 PRO A 195 ? ? -36.83 116.93 61 6 PRO A 82 ? ? -47.57 -12.97 62 6 SER A 85 ? ? 55.76 82.04 63 6 ALA A 86 ? ? 46.64 -93.89 64 6 THR A 87 ? ? -153.09 -83.83 65 6 LEU A 88 ? ? -66.74 95.70 66 6 SER A 89 ? ? -58.05 178.33 67 6 ASN A 123 ? ? -59.44 -1.13 68 6 TYR A 144 ? ? 54.71 -84.83 69 6 THR A 146 ? ? -60.87 -77.79 70 6 MET A 148 ? ? -163.56 -73.28 71 6 ASN A 149 ? ? 60.04 148.73 72 6 PRO A 154 ? ? -37.90 125.18 73 6 ASN A 164 ? ? -158.53 63.43 74 6 ILE A 191 ? ? -63.21 -178.50 75 6 GLU A 192 ? ? -64.05 -141.92 76 6 THR A 194 ? ? -160.57 62.67 77 7 SER A 85 ? ? -168.81 82.73 78 7 ALA A 86 ? ? -76.76 -146.27 79 7 LEU A 88 ? ? 46.22 95.78 80 7 SER A 89 ? ? -56.70 -168.92 81 7 TYR A 144 ? ? -77.53 -78.34 82 7 PRO A 154 ? ? -37.31 127.61 83 7 ASN A 164 ? ? -159.96 68.45 84 7 ILE A 191 ? ? -146.55 -27.36 85 8 LEU A 83 ? ? 52.98 14.53 86 8 ALA A 86 ? ? -78.65 -160.86 87 8 THR A 87 ? ? -152.78 24.21 88 8 SER A 89 ? ? -68.33 -175.46 89 8 THR A 146 ? ? 51.07 -152.43 90 8 ALA A 147 ? ? -161.36 -0.57 91 8 PRO A 150 ? ? -37.91 -28.85 92 8 ASN A 164 ? ? -158.52 69.94 93 8 TYR A 193 ? ? 47.38 -150.45 94 9 ALA A 86 ? ? -160.54 80.22 95 9 THR A 87 ? ? -73.15 -169.52 96 9 TYR A 144 ? ? -161.41 53.54 97 9 THR A 146 ? ? -171.80 143.71 98 9 ALA A 147 ? ? -168.19 -66.30 99 9 ASN A 164 ? ? -161.00 72.61 100 9 ALA A 190 ? ? 39.17 85.42 101 9 GLU A 192 ? ? -161.87 6.94 102 9 TYR A 193 ? ? -60.80 89.48 103 9 PRO A 195 ? ? -36.60 111.24 104 10 ALA A 86 ? ? 51.04 -177.69 105 10 THR A 87 ? ? -74.68 -74.33 106 10 SER A 89 ? ? -48.77 178.53 107 10 ALA A 147 ? ? -175.80 -75.35 108 10 PRO A 150 ? ? -37.78 -35.55 109 10 ASN A 164 ? ? -153.31 66.50 110 10 GLU A 192 ? ? -67.19 67.84 111 10 THR A 194 ? ? -160.82 74.29 112 11 PRO A 82 ? ? -47.55 107.89 113 11 SER A 85 ? ? 61.16 -74.27 114 11 ALA A 86 ? ? -64.74 -173.95 115 11 THR A 87 ? ? 53.42 80.73 116 11 LEU A 88 ? ? -67.60 96.21 117 11 SER A 89 ? ? -58.90 -172.37 118 11 ALA A 147 ? ? -169.15 26.27 119 11 PRO A 154 ? ? -37.30 140.44 120 11 ASN A 164 ? ? -158.05 69.12 121 11 TYR A 193 ? ? -78.81 -99.45 122 12 PRO A 82 ? ? -73.19 23.65 123 12 LEU A 83 ? ? -69.89 -86.04 124 12 SER A 85 ? ? -162.38 100.34 125 12 ALA A 86 ? ? 61.00 117.30 126 12 THR A 87 ? ? -168.39 80.79 127 12 SER A 89 ? ? -58.17 171.19 128 12 TYR A 141 ? ? -72.80 -74.20 129 12 TYR A 144 ? ? 52.19 96.60 130 12 ALA A 147 ? ? 53.46 87.16 131 12 MET A 148 ? ? 35.89 -157.35 132 12 PRO A 154 ? ? -37.01 126.54 133 12 ASN A 164 ? ? -153.43 72.49 134 12 ALA A 190 ? ? -75.53 -147.46 135 12 GLU A 192 ? ? -165.48 -33.89 136 13 SER A 85 ? ? -170.76 -33.28 137 13 ALA A 86 ? ? 57.82 12.06 138 13 THR A 87 ? ? -71.26 -100.32 139 13 SER A 89 ? ? -64.30 -175.40 140 13 TYR A 144 ? ? -173.44 137.71 141 13 ASN A 145 ? ? -160.32 36.06 142 13 THR A 146 ? ? 49.67 100.19 143 13 ALA A 147 ? ? -68.08 -79.60 144 13 PRO A 150 ? ? -37.67 -23.36 145 13 PRO A 154 ? ? -37.11 123.26 146 13 ASN A 164 ? ? -162.12 67.88 147 13 TYR A 193 ? ? 59.82 118.48 148 13 THR A 194 ? ? 57.01 74.35 149 14 PRO A 82 ? ? -48.57 171.18 150 14 SER A 85 ? ? -166.90 -17.35 151 14 SER A 89 ? ? -66.98 -167.98 152 14 PRO A 134 ? ? -38.83 -27.88 153 14 TYR A 141 ? ? -77.66 -169.62 154 14 TYR A 144 ? ? 55.56 -173.96 155 14 THR A 146 ? ? -79.27 27.76 156 14 ALA A 147 ? ? 48.21 77.90 157 14 PRO A 154 ? ? -38.07 120.48 158 14 GLN A 155 ? ? -39.22 -34.28 159 14 ASN A 164 ? ? -169.36 66.57 160 14 ALA A 190 ? ? -39.88 -73.74 161 14 ILE A 191 ? ? -159.20 -6.14 162 15 ALA A 86 ? ? -169.21 77.96 163 15 THR A 87 ? ? -164.86 -129.88 164 15 LEU A 88 ? ? -57.51 97.76 165 15 SER A 89 ? ? -59.15 -170.46 166 15 TYR A 141 ? ? -78.24 47.85 167 15 ASN A 149 ? ? -46.51 153.81 168 15 ASN A 164 ? ? -172.18 69.54 169 15 ALA A 190 ? ? 52.70 90.40 170 15 TYR A 193 ? ? -46.79 93.43 171 15 THR A 194 ? ? -165.75 62.31 172 16 ALA A 86 ? ? -61.84 -87.21 173 16 THR A 87 ? ? -152.58 -122.22 174 16 SER A 89 ? ? -68.96 -171.50 175 16 TYR A 141 ? ? -88.19 -93.42 176 16 TYR A 144 ? ? -74.69 35.38 177 16 ALA A 147 ? ? -173.54 -73.44 178 16 ASN A 164 ? ? -160.76 68.41 179 16 ILE A 191 ? ? 33.66 32.85 180 16 TYR A 193 ? ? -164.92 86.56 181 17 LEU A 83 ? ? -74.25 -95.14 182 17 ALA A 86 ? ? -172.10 62.36 183 17 THR A 87 ? ? -162.69 108.61 184 17 SER A 89 ? ? -53.14 177.43 185 17 ALA A 147 ? ? -172.08 47.49 186 17 ASN A 149 ? ? 60.37 81.99 187 17 PRO A 154 ? ? -37.80 124.78 188 17 ASN A 164 ? ? -159.25 63.23 189 17 TYR A 193 ? ? -58.79 108.90 190 18 LEU A 83 ? ? -72.09 -71.64 191 18 SER A 85 ? ? -169.48 84.00 192 18 ALA A 86 ? ? -55.94 103.02 193 18 TYR A 141 ? ? -80.34 -103.18 194 18 TYR A 144 ? ? -161.36 10.49 195 18 ASN A 145 ? ? 54.65 -89.92 196 18 THR A 146 ? ? -54.45 171.41 197 18 PRO A 154 ? ? -37.17 131.56 198 18 ASN A 164 ? ? -157.78 74.95 199 18 PRO A 168 ? ? -39.80 -34.53 200 18 ALA A 190 ? ? -70.64 -84.91 201 18 TYR A 193 ? ? -78.68 47.59 202 18 THR A 194 ? ? -165.46 73.89 203 18 PRO A 195 ? ? -48.76 -173.39 204 19 SER A 85 ? ? -161.92 109.22 205 19 THR A 87 ? ? -162.14 -66.71 206 19 SER A 89 ? ? -54.53 175.42 207 19 PRO A 134 ? ? -38.34 -23.06 208 19 TYR A 144 ? ? -77.26 28.77 209 19 MET A 148 ? ? 57.80 -132.07 210 19 ASN A 149 ? ? 60.08 84.33 211 19 PRO A 150 ? ? -49.17 -6.45 212 19 ASN A 164 ? ? -154.10 69.57 213 19 ALA A 190 ? ? -70.69 -142.07 214 19 ILE A 191 ? ? 52.44 99.36 215 19 TYR A 193 ? ? -163.23 105.05 216 19 THR A 194 ? ? -164.94 67.10 217 20 LEU A 83 ? ? -78.82 40.51 218 20 SER A 85 ? ? 49.29 78.75 219 20 ALA A 86 ? ? -172.39 45.75 220 20 THR A 87 ? ? -164.62 92.73 221 20 SER A 89 ? ? -69.25 -176.35 222 20 ASN A 145 ? ? -168.11 67.61 223 20 THR A 146 ? ? 34.58 38.58 224 20 ASN A 164 ? ? -160.66 66.61 225 20 ILE A 191 ? ? 54.92 -84.17 226 20 GLU A 192 ? ? 60.70 -74.27 227 20 TYR A 193 ? ? -172.10 100.49 228 20 THR A 194 ? ? -165.08 57.21 # _pdbx_nmr_ensemble.entry_id 5KES _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5KES _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 '0.5 mM [U-13C; U-15N] Ddi1 86-196, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N13C_sample solution ? 2 '0.5 mM [U-15N] Ddi1 86-196, 90% H2O/10% D2O' '90% H2O/10% D2O' 15N_sample solution ? # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'Ddi1 86-196-1' 0.5 ? mM '[U-13C; U-15N]' 2 'Ddi1 86-196-2' 0.5 ? mM '[U-15N]' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 303 atm 1 6.5 110 ;10 mM HEPES 50 mM NaCl pH 6.5 with NaOH ; ? mM iso ? pH ? ? K 2 303 atm 1 6.5 110 ;10 mM HEPES 50 mM NaCl pH 6.5 with NaOH 10 mg/mL Pf1 phage added ; ? mM Pf1 ? pH ? ? K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 2 '2D 1H-15N het NOE' 1 isotropic 2 1 2 '2D 1H-15N HSQC-IPAP' 1 isotropic 3 2 2 '2D 1H-15N HSQC-IPAP' 1 anisotropic 4 1 1 '3D CBCA(CO)NH' 1 isotropic 5 1 1 '3D HNCACB' 1 isotropic 6 1 1 '3D 15N/1H NOESY-HSQC' 2 isotropic 7 1 1 '3D 13C/1H HSQC-NOESY' 2 isotropic 8 1 2 '2D 1H-15N HSQC' 1 isotropic 9 1 1 '2D 1H-15N HSQC' 2 isotropic # _pdbx_nmr_refine.entry_id 5KES _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 6 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'structure calculation' XPLOR-NIH 2.40 ;C.D. Schwieters, J.J. Kuszewski, N. Tjandra, and G.M. Clore ; 6 refinement XPLOR-NIH 2.40 ;C.D. Schwieters, J.J. Kuszewski, N. Tjandra, and G.M. Clore ; 2 'chemical shift assignment' Sparky ? Goddard 3 'data analysis' TALOS ? 'Cornilescu, Delaglio and Bax' 4 'chemical shift assignment' CYANA ? 'Guntert, Mumenthaler and Wuthrich' 5 'data analysis' Module ? 'M. Blackledge' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 ILE N N N N 123 ILE CA C N S 124 ILE C C N N 125 ILE O O N N 126 ILE CB C N S 127 ILE CG1 C N N 128 ILE CG2 C N N 129 ILE CD1 C N N 130 ILE OXT O N N 131 ILE H H N N 132 ILE H2 H N N 133 ILE HA H N N 134 ILE HB H N N 135 ILE HG12 H N N 136 ILE HG13 H N N 137 ILE HG21 H N N 138 ILE HG22 H N N 139 ILE HG23 H N N 140 ILE HD11 H N N 141 ILE HD12 H N N 142 ILE HD13 H N N 143 ILE HXT H N N 144 LEU N N N N 145 LEU CA C N S 146 LEU C C N N 147 LEU O O N N 148 LEU CB C N N 149 LEU CG C N N 150 LEU CD1 C N N 151 LEU CD2 C N N 152 LEU OXT O N N 153 LEU H H N N 154 LEU H2 H N N 155 LEU HA H N N 156 LEU HB2 H N N 157 LEU HB3 H N N 158 LEU HG H N N 159 LEU HD11 H N N 160 LEU HD12 H N N 161 LEU HD13 H N N 162 LEU HD21 H N N 163 LEU HD22 H N N 164 LEU HD23 H N N 165 LEU HXT H N N 166 LYS N N N N 167 LYS CA C N S 168 LYS C C N N 169 LYS O O N N 170 LYS CB C N N 171 LYS CG C N N 172 LYS CD C N N 173 LYS CE C N N 174 LYS NZ N N N 175 LYS OXT O N N 176 LYS H H N N 177 LYS H2 H N N 178 LYS HA H N N 179 LYS HB2 H N N 180 LYS HB3 H N N 181 LYS HG2 H N N 182 LYS HG3 H N N 183 LYS HD2 H N N 184 LYS HD3 H N N 185 LYS HE2 H N N 186 LYS HE3 H N N 187 LYS HZ1 H N N 188 LYS HZ2 H N N 189 LYS HZ3 H N N 190 LYS HXT H N N 191 MET N N N N 192 MET CA C N S 193 MET C C N N 194 MET O O N N 195 MET CB C N N 196 MET CG C N N 197 MET SD S N N 198 MET CE C N N 199 MET OXT O N N 200 MET H H N N 201 MET H2 H N N 202 MET HA H N N 203 MET HB2 H N N 204 MET HB3 H N N 205 MET HG2 H N N 206 MET HG3 H N N 207 MET HE1 H N N 208 MET HE2 H N N 209 MET HE3 H N N 210 MET HXT H N N 211 PHE N N N N 212 PHE CA C N S 213 PHE C C N N 214 PHE O O N N 215 PHE CB C N N 216 PHE CG C Y N 217 PHE CD1 C Y N 218 PHE CD2 C Y N 219 PHE CE1 C Y N 220 PHE CE2 C Y N 221 PHE CZ C Y N 222 PHE OXT O N N 223 PHE H H N N 224 PHE H2 H N N 225 PHE HA H N N 226 PHE HB2 H N N 227 PHE HB3 H N N 228 PHE HD1 H N N 229 PHE HD2 H N N 230 PHE HE1 H N N 231 PHE HE2 H N N 232 PHE HZ H N N 233 PHE HXT H N N 234 PRO N N N N 235 PRO CA C N S 236 PRO C C N N 237 PRO O O N N 238 PRO CB C N N 239 PRO CG C N N 240 PRO CD C N N 241 PRO OXT O N N 242 PRO H H N N 243 PRO HA H N N 244 PRO HB2 H N N 245 PRO HB3 H N N 246 PRO HG2 H N N 247 PRO HG3 H N N 248 PRO HD2 H N N 249 PRO HD3 H N N 250 PRO HXT H N N 251 SER N N N N 252 SER CA C N S 253 SER C C N N 254 SER O O N N 255 SER CB C N N 256 SER OG O N N 257 SER OXT O N N 258 SER H H N N 259 SER H2 H N N 260 SER HA H N N 261 SER HB2 H N N 262 SER HB3 H N N 263 SER HG H N N 264 SER HXT H N N 265 THR N N N N 266 THR CA C N S 267 THR C C N N 268 THR O O N N 269 THR CB C N R 270 THR OG1 O N N 271 THR CG2 C N N 272 THR OXT O N N 273 THR H H N N 274 THR H2 H N N 275 THR HA H N N 276 THR HB H N N 277 THR HG1 H N N 278 THR HG21 H N N 279 THR HG22 H N N 280 THR HG23 H N N 281 THR HXT H N N 282 TYR N N N N 283 TYR CA C N S 284 TYR C C N N 285 TYR O O N N 286 TYR CB C N N 287 TYR CG C Y N 288 TYR CD1 C Y N 289 TYR CD2 C Y N 290 TYR CE1 C Y N 291 TYR CE2 C Y N 292 TYR CZ C Y N 293 TYR OH O N N 294 TYR OXT O N N 295 TYR H H N N 296 TYR H2 H N N 297 TYR HA H N N 298 TYR HB2 H N N 299 TYR HB3 H N N 300 TYR HD1 H N N 301 TYR HD2 H N N 302 TYR HE1 H N N 303 TYR HE2 H N N 304 TYR HH H N N 305 TYR HXT H N N 306 VAL N N N N 307 VAL CA C N S 308 VAL C C N N 309 VAL O O N N 310 VAL CB C N N 311 VAL CG1 C N N 312 VAL CG2 C N N 313 VAL OXT O N N 314 VAL H H N N 315 VAL H2 H N N 316 VAL HA H N N 317 VAL HB H N N 318 VAL HG11 H N N 319 VAL HG12 H N N 320 VAL HG13 H N N 321 VAL HG21 H N N 322 VAL HG22 H N N 323 VAL HG23 H N N 324 VAL HXT H N N 325 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 ILE N CA sing N N 116 ILE N H sing N N 117 ILE N H2 sing N N 118 ILE CA C sing N N 119 ILE CA CB sing N N 120 ILE CA HA sing N N 121 ILE C O doub N N 122 ILE C OXT sing N N 123 ILE CB CG1 sing N N 124 ILE CB CG2 sing N N 125 ILE CB HB sing N N 126 ILE CG1 CD1 sing N N 127 ILE CG1 HG12 sing N N 128 ILE CG1 HG13 sing N N 129 ILE CG2 HG21 sing N N 130 ILE CG2 HG22 sing N N 131 ILE CG2 HG23 sing N N 132 ILE CD1 HD11 sing N N 133 ILE CD1 HD12 sing N N 134 ILE CD1 HD13 sing N N 135 ILE OXT HXT sing N N 136 LEU N CA sing N N 137 LEU N H sing N N 138 LEU N H2 sing N N 139 LEU CA C sing N N 140 LEU CA CB sing N N 141 LEU CA HA sing N N 142 LEU C O doub N N 143 LEU C OXT sing N N 144 LEU CB CG sing N N 145 LEU CB HB2 sing N N 146 LEU CB HB3 sing N N 147 LEU CG CD1 sing N N 148 LEU CG CD2 sing N N 149 LEU CG HG sing N N 150 LEU CD1 HD11 sing N N 151 LEU CD1 HD12 sing N N 152 LEU CD1 HD13 sing N N 153 LEU CD2 HD21 sing N N 154 LEU CD2 HD22 sing N N 155 LEU CD2 HD23 sing N N 156 LEU OXT HXT sing N N 157 LYS N CA sing N N 158 LYS N H sing N N 159 LYS N H2 sing N N 160 LYS CA C sing N N 161 LYS CA CB sing N N 162 LYS CA HA sing N N 163 LYS C O doub N N 164 LYS C OXT sing N N 165 LYS CB CG sing N N 166 LYS CB HB2 sing N N 167 LYS CB HB3 sing N N 168 LYS CG CD sing N N 169 LYS CG HG2 sing N N 170 LYS CG HG3 sing N N 171 LYS CD CE sing N N 172 LYS CD HD2 sing N N 173 LYS CD HD3 sing N N 174 LYS CE NZ sing N N 175 LYS CE HE2 sing N N 176 LYS CE HE3 sing N N 177 LYS NZ HZ1 sing N N 178 LYS NZ HZ2 sing N N 179 LYS NZ HZ3 sing N N 180 LYS OXT HXT sing N N 181 MET N CA sing N N 182 MET N H sing N N 183 MET N H2 sing N N 184 MET CA C sing N N 185 MET CA CB sing N N 186 MET CA HA sing N N 187 MET C O doub N N 188 MET C OXT sing N N 189 MET CB CG sing N N 190 MET CB HB2 sing N N 191 MET CB HB3 sing N N 192 MET CG SD sing N N 193 MET CG HG2 sing N N 194 MET CG HG3 sing N N 195 MET SD CE sing N N 196 MET CE HE1 sing N N 197 MET CE HE2 sing N N 198 MET CE HE3 sing N N 199 MET OXT HXT sing N N 200 PHE N CA sing N N 201 PHE N H sing N N 202 PHE N H2 sing N N 203 PHE CA C sing N N 204 PHE CA CB sing N N 205 PHE CA HA sing N N 206 PHE C O doub N N 207 PHE C OXT sing N N 208 PHE CB CG sing N N 209 PHE CB HB2 sing N N 210 PHE CB HB3 sing N N 211 PHE CG CD1 doub Y N 212 PHE CG CD2 sing Y N 213 PHE CD1 CE1 sing Y N 214 PHE CD1 HD1 sing N N 215 PHE CD2 CE2 doub Y N 216 PHE CD2 HD2 sing N N 217 PHE CE1 CZ doub Y N 218 PHE CE1 HE1 sing N N 219 PHE CE2 CZ sing Y N 220 PHE CE2 HE2 sing N N 221 PHE CZ HZ sing N N 222 PHE OXT HXT sing N N 223 PRO N CA sing N N 224 PRO N CD sing N N 225 PRO N H sing N N 226 PRO CA C sing N N 227 PRO CA CB sing N N 228 PRO CA HA sing N N 229 PRO C O doub N N 230 PRO C OXT sing N N 231 PRO CB CG sing N N 232 PRO CB HB2 sing N N 233 PRO CB HB3 sing N N 234 PRO CG CD sing N N 235 PRO CG HG2 sing N N 236 PRO CG HG3 sing N N 237 PRO CD HD2 sing N N 238 PRO CD HD3 sing N N 239 PRO OXT HXT sing N N 240 SER N CA sing N N 241 SER N H sing N N 242 SER N H2 sing N N 243 SER CA C sing N N 244 SER CA CB sing N N 245 SER CA HA sing N N 246 SER C O doub N N 247 SER C OXT sing N N 248 SER CB OG sing N N 249 SER CB HB2 sing N N 250 SER CB HB3 sing N N 251 SER OG HG sing N N 252 SER OXT HXT sing N N 253 THR N CA sing N N 254 THR N H sing N N 255 THR N H2 sing N N 256 THR CA C sing N N 257 THR CA CB sing N N 258 THR CA HA sing N N 259 THR C O doub N N 260 THR C OXT sing N N 261 THR CB OG1 sing N N 262 THR CB CG2 sing N N 263 THR CB HB sing N N 264 THR OG1 HG1 sing N N 265 THR CG2 HG21 sing N N 266 THR CG2 HG22 sing N N 267 THR CG2 HG23 sing N N 268 THR OXT HXT sing N N 269 TYR N CA sing N N 270 TYR N H sing N N 271 TYR N H2 sing N N 272 TYR CA C sing N N 273 TYR CA CB sing N N 274 TYR CA HA sing N N 275 TYR C O doub N N 276 TYR C OXT sing N N 277 TYR CB CG sing N N 278 TYR CB HB2 sing N N 279 TYR CB HB3 sing N N 280 TYR CG CD1 doub Y N 281 TYR CG CD2 sing Y N 282 TYR CD1 CE1 sing Y N 283 TYR CD1 HD1 sing N N 284 TYR CD2 CE2 doub Y N 285 TYR CD2 HD2 sing N N 286 TYR CE1 CZ doub Y N 287 TYR CE1 HE1 sing N N 288 TYR CE2 CZ sing Y N 289 TYR CE2 HE2 sing N N 290 TYR CZ OH sing N N 291 TYR OH HH sing N N 292 TYR OXT HXT sing N N 293 VAL N CA sing N N 294 VAL N H sing N N 295 VAL N H2 sing N N 296 VAL CA C sing N N 297 VAL CA CB sing N N 298 VAL CA HA sing N N 299 VAL C O doub N N 300 VAL C OXT sing N N 301 VAL CB CG1 sing N N 302 VAL CB CG2 sing N N 303 VAL CB HB sing N N 304 VAL CG1 HG11 sing N N 305 VAL CG1 HG12 sing N N 306 VAL CG1 HG13 sing N N 307 VAL CG2 HG21 sing N N 308 VAL CG2 HG22 sing N N 309 VAL CG2 HG23 sing N N 310 VAL OXT HXT sing N N 311 # _pdbx_audit_support.funding_organization 'Canadian Institutes of Health Research (CIHR)' _pdbx_audit_support.country Canada _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 600 'RT probe' 2 AVANCE ? Bruker 850 cryoprobe # _atom_sites.entry_id 5KES _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_