HEADER TRANSFERASE 13-JUN-16 5KGA TITLE X-RAY STRUCTURE OF A GLUCOSAMINE N-ACETYLTRANSFERASE FROM CLOSTRIDIUM TITLE 2 ACETOBUTYLICUM, MUTANT D287N, IN COMPLEX WITH N-ACETYLGLUCOSAMINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PREDICTED ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: MUTANT D287N SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM ACETOBUTYLICUM (STRAIN ATCC 824 / SOURCE 3 DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787); SOURCE 4 ORGANISM_TAXID: 272562; SOURCE 5 STRAIN: ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787; SOURCE 6 GENE: CA_C0184; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: ROSETTA2(DE3) KEYWDS N-ACERYLTRANSFERASE, ACYLTRANSFERASE, GNAT, TANDEM-GNAT, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR B.J.DOPKINS,J.B.THODEN,P.A.TIPTON,H.M.HOLDEN REVDAT 7 27-SEP-23 5KGA 1 HETSYN REVDAT 6 29-JUL-20 5KGA 1 COMPND REMARK HETNAM SITE REVDAT 5 25-DEC-19 5KGA 1 REMARK REVDAT 4 27-SEP-17 5KGA 1 JRNL REMARK REVDAT 3 24-AUG-16 5KGA 1 JRNL REVDAT 2 13-JUL-16 5KGA 1 JRNL REVDAT 1 06-JUL-16 5KGA 0 JRNL AUTH B.J.DOPKINS,P.A.TIPTON,J.B.THODEN,H.M.HOLDEN JRNL TITL STRUCTURAL STUDIES ON A GLUCOSAMINE/GLUCOSAMINIDE JRNL TITL 2 N-ACETYLTRANSFERASE. JRNL REF BIOCHEMISTRY V. 55 4495 2016 JRNL REFN ISSN 0006-2960 JRNL PMID 27348258 JRNL DOI 10.1021/ACS.BIOCHEM.6B00536 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0124 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 51862 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2714 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3664 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.09 REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE SET COUNT : 187 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5216 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 222 REMARK 3 SOLVENT ATOMS : 575 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.05 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.50000 REMARK 3 B22 (A**2) : -0.35000 REMARK 3 B33 (A**2) : 0.93000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.40000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.154 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.148 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.123 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.543 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5605 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5360 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7567 ; 1.850 ; 2.000 REMARK 3 BOND ANGLES OTHERS (DEGREES): 12357 ; 0.897 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 640 ; 6.920 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 256 ;37.434 ;23.828 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1006 ;15.315 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;15.788 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 780 ; 0.233 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6086 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1342 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2538 ; 1.594 ; 1.717 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2535 ; 1.595 ; 1.716 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3169 ; 2.433 ; 2.566 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3170 ; 2.433 ; 2.567 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3067 ; 2.706 ; 2.053 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3067 ; 2.706 ; 2.053 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4394 ; 4.303 ; 2.938 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7071 ; 6.403 ;15.050 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7072 ; 6.403 ;15.053 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5KGA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000222177. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU200 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SAINT REMARK 200 DATA SCALING SOFTWARE : SADABS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54576 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 2.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : 0.38900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5KF1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 8-11% PEG-8000, 100 MM HOMOPIPES, 5 MM REMARK 280 COA, 20 MM N-ACETYLGLUCOSAMINE, PH 5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.80000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 317 REMARK 465 GLY A 318 REMARK 465 LYS A 319 REMARK 465 GLY A 320 REMARK 465 GLY A 321 REMARK 465 GLY A 322 REMARK 465 HIS A 323 REMARK 465 HIS A 324 REMARK 465 HIS A 325 REMARK 465 HIS A 326 REMARK 465 HIS A 327 REMARK 465 HIS A 328 REMARK 465 ASP B 317 REMARK 465 GLY B 318 REMARK 465 LYS B 319 REMARK 465 GLY B 320 REMARK 465 GLY B 321 REMARK 465 GLY B 322 REMARK 465 HIS B 323 REMARK 465 HIS B 324 REMARK 465 HIS B 325 REMARK 465 HIS B 326 REMARK 465 HIS B 327 REMARK 465 HIS B 328 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 316 CG CD CE NZ REMARK 470 LYS B 160 CG CD CE NZ REMARK 470 LYS B 161 CG CD CE NZ REMARK 470 PRO B 162 CG CD REMARK 470 SER B 163 OG REMARK 470 ILE B 164 CG1 CG2 CD1 REMARK 470 LYS B 316 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 710 O HOH A 821 2.00 REMARK 500 O HOH A 773 O HOH A 774 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 504 O HOH B 722 2444 1.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 162 N - CA - CB ANGL. DEV. = 7.6 DEGREES REMARK 500 ARG B 208 NE - CZ - NH2 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 144 -135.53 -115.82 REMARK 500 PHE A 189 55.29 -140.17 REMARK 500 LYS A 216 -120.00 53.80 REMARK 500 LYS A 282 -98.46 -114.76 REMARK 500 LYS B 65 151.64 -48.26 REMARK 500 SER B 80 149.42 -171.55 REMARK 500 GLN B 144 -142.68 -114.99 REMARK 500 LYS B 216 -107.83 50.49 REMARK 500 ASN B 246 48.57 -97.32 REMARK 500 LYS B 282 -101.22 -110.69 REMARK 500 TRP B 305 -53.18 -122.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 COA A 402 REMARK 610 COA A 404 REMARK 610 COA B 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KF1 RELATED DB: PDB REMARK 900 RELATED ID: 5KF2 RELATED DB: PDB REMARK 900 RELATED ID: 5KF8 RELATED DB: PDB REMARK 900 RELATED ID: 5KF9 RELATED DB: PDB REMARK 900 RELATED ID: 5KGH RELATED DB: PDB REMARK 900 RELATED ID: 5KGJ RELATED DB: PDB REMARK 900 RELATED ID: 5KGP RELATED DB: PDB DBREF 5KGA A 1 320 UNP Q97ML2 Q97ML2_CLOAB 1 320 DBREF 5KGA B 1 320 UNP Q97ML2 Q97ML2_CLOAB 1 320 SEQADV 5KGA ASN A 287 UNP Q97ML2 ASP 287 ENGINEERED MUTATION SEQADV 5KGA GLY A 321 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA GLY A 322 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS A 323 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS A 324 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS A 325 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS A 326 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS A 327 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS A 328 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA ASN B 287 UNP Q97ML2 ASP 287 ENGINEERED MUTATION SEQADV 5KGA GLY B 321 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA GLY B 322 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS B 323 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS B 324 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS B 325 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS B 326 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS B 327 UNP Q97ML2 EXPRESSION TAG SEQADV 5KGA HIS B 328 UNP Q97ML2 EXPRESSION TAG SEQRES 1 A 328 MET GLU ILE LYS GLU THR TYR ASP PHE SER SER ILE VAL SEQRES 2 A 328 ASP LEU TRP ASN LYS ASN ILE GLY THR VAL TYR PRO MET SEQRES 3 A 328 ASN LEU GLU LEU PHE LYS GLN ASN TYR ILE ASN ASP ARG SEQRES 4 A 328 GLN ARG LYS LYS ILE MET GLY ALA PHE ASN GLY GLU ILE SEQRES 5 A 328 LEU ILE GLY PHE VAL ILE TYR LYS GLN TRP THR TYR LYS SEQRES 6 A 328 SER GLY SER LEU LYS PRO ASN HIS LYS ILE GLY TYR ILE SEQRES 7 A 328 ASN SER ILE ILE VAL ASP ILE ASN PHE ARG HIS GLN GLY SEQRES 8 A 328 ILE GLY THR LYS LEU LEU ASP ALA ALA GLU GLU GLU LEU SEQRES 9 A 328 ILE ASN SER GLY VAL LYS ILE LEU ARG CYS GLY SER ASP SEQRES 10 A 328 THR TYR HIS PHE PHE PRO GLY ILE PRO LEU GLU CYS LEU SEQRES 11 A 328 PRO SER GLU GLU PHE PHE LEU VAL ARG GLY TYR LYS MET SEQRES 12 A 328 GLN ASP TYR PHE TYR ASP LEU ILE GLY ASP VAL SER LYS SEQRES 13 A 328 VAL ASP PHE LYS LYS PRO SER ILE LYS ASP GLY PHE LYS SEQRES 14 A 328 VAL ASN VAL MET LYS PRO GLU ASP ARG LYS GLY LEU PHE SEQRES 15 A 328 GLU PHE LEU GLU LYS SER PHE SER GLY ARG TRP LEU GLU SEQRES 16 A 328 GLU PHE ILE GLU PHE PHE GLN VAL GLY MET LYS GLU ARG SEQRES 17 A 328 ASP ILE VAL LEU ILE LYS TYR LYS THR SER VAL ILE GLY SEQRES 18 A 328 PHE SER HIS ILE TYR ASP ASN LYS SER SER PHE ILE GLY SEQRES 19 A 328 PRO PRO ILE TYR TRP LYS ALA LEU LEU GLY HIS ASN TYR SEQRES 20 A 328 GLY GLY LEU GLY PRO ILE GLY ILE ASP LYS THR TYR ARG SEQRES 21 A 328 LYS GLN GLY LEU GLY ARG LEU LEU LEU TYR GLU SER LEU SEQRES 22 A 328 GLN ILE LEU LYS LYS ARG GLU VAL LYS LYS MET VAL ILE SEQRES 23 A 328 ASN TRP THR GLU LYS ASP ILE ILE ASN PHE TYR GLY ARG SEQRES 24 A 328 PHE ASN PHE MET PRO TRP LYS ALA TYR ARG LYS ALA THR SEQRES 25 A 328 LYS GLU VAL LYS ASP GLY LYS GLY GLY GLY HIS HIS HIS SEQRES 26 A 328 HIS HIS HIS SEQRES 1 B 328 MET GLU ILE LYS GLU THR TYR ASP PHE SER SER ILE VAL SEQRES 2 B 328 ASP LEU TRP ASN LYS ASN ILE GLY THR VAL TYR PRO MET SEQRES 3 B 328 ASN LEU GLU LEU PHE LYS GLN ASN TYR ILE ASN ASP ARG SEQRES 4 B 328 GLN ARG LYS LYS ILE MET GLY ALA PHE ASN GLY GLU ILE SEQRES 5 B 328 LEU ILE GLY PHE VAL ILE TYR LYS GLN TRP THR TYR LYS SEQRES 6 B 328 SER GLY SER LEU LYS PRO ASN HIS LYS ILE GLY TYR ILE SEQRES 7 B 328 ASN SER ILE ILE VAL ASP ILE ASN PHE ARG HIS GLN GLY SEQRES 8 B 328 ILE GLY THR LYS LEU LEU ASP ALA ALA GLU GLU GLU LEU SEQRES 9 B 328 ILE ASN SER GLY VAL LYS ILE LEU ARG CYS GLY SER ASP SEQRES 10 B 328 THR TYR HIS PHE PHE PRO GLY ILE PRO LEU GLU CYS LEU SEQRES 11 B 328 PRO SER GLU GLU PHE PHE LEU VAL ARG GLY TYR LYS MET SEQRES 12 B 328 GLN ASP TYR PHE TYR ASP LEU ILE GLY ASP VAL SER LYS SEQRES 13 B 328 VAL ASP PHE LYS LYS PRO SER ILE LYS ASP GLY PHE LYS SEQRES 14 B 328 VAL ASN VAL MET LYS PRO GLU ASP ARG LYS GLY LEU PHE SEQRES 15 B 328 GLU PHE LEU GLU LYS SER PHE SER GLY ARG TRP LEU GLU SEQRES 16 B 328 GLU PHE ILE GLU PHE PHE GLN VAL GLY MET LYS GLU ARG SEQRES 17 B 328 ASP ILE VAL LEU ILE LYS TYR LYS THR SER VAL ILE GLY SEQRES 18 B 328 PHE SER HIS ILE TYR ASP ASN LYS SER SER PHE ILE GLY SEQRES 19 B 328 PRO PRO ILE TYR TRP LYS ALA LEU LEU GLY HIS ASN TYR SEQRES 20 B 328 GLY GLY LEU GLY PRO ILE GLY ILE ASP LYS THR TYR ARG SEQRES 21 B 328 LYS GLN GLY LEU GLY ARG LEU LEU LEU TYR GLU SER LEU SEQRES 22 B 328 GLN ILE LEU LYS LYS ARG GLU VAL LYS LYS MET VAL ILE SEQRES 23 B 328 ASN TRP THR GLU LYS ASP ILE ILE ASN PHE TYR GLY ARG SEQRES 24 B 328 PHE ASN PHE MET PRO TRP LYS ALA TYR ARG LYS ALA THR SEQRES 25 B 328 LYS GLU VAL LYS ASP GLY LYS GLY GLY GLY HIS HIS HIS SEQRES 26 B 328 HIS HIS HIS HET NAG A 401 15 HET COA A 402 32 HET ACO A 403 51 HET COA A 404 22 HET EDO A 405 4 HET CL A 406 1 HET NAG B 401 15 HET TMA B 402 5 HET ACO B 403 51 HET COA B 404 22 HET EDO B 405 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM COA COENZYME A HETNAM ACO ACETYL COENZYME *A HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETNAM TMA TETRAMETHYLAMMONIUM ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 COA 3(C21 H36 N7 O16 P3 S) FORMUL 5 ACO 2(C23 H38 N7 O17 P3 S) FORMUL 7 EDO 2(C2 H6 O2) FORMUL 8 CL CL 1- FORMUL 10 TMA C4 H12 N 1+ FORMUL 14 HOH *575(H2 O) HELIX 1 AA1 ASP A 8 GLY A 21 1 14 HELIX 2 AA2 ASN A 27 ASP A 38 1 12 HELIX 3 AA3 ILE A 85 ARG A 88 5 4 HELIX 4 AA4 GLY A 91 SER A 107 1 17 HELIX 5 AA5 GLU A 128 LEU A 130 5 3 HELIX 6 AA6 PRO A 131 ARG A 139 1 9 HELIX 7 AA7 LYS A 174 GLU A 176 5 3 HELIX 8 AA8 ASP A 177 PHE A 189 1 13 HELIX 9 AA9 GLY A 191 VAL A 203 1 13 HELIX 10 AB1 LYS A 206 ARG A 208 5 3 HELIX 11 AB2 GLY A 234 TYR A 238 5 5 HELIX 12 AB3 TRP A 239 LEU A 243 5 5 HELIX 13 AB4 LYS A 257 ARG A 260 5 4 HELIX 14 AB5 GLY A 263 ARG A 279 1 17 HELIX 15 AB6 ILE A 293 ARG A 299 1 7 HELIX 16 AB7 ASP B 8 GLY B 21 1 14 HELIX 17 AB8 ASN B 27 ASP B 38 1 12 HELIX 18 AB9 ILE B 85 ARG B 88 5 4 HELIX 19 AC1 GLY B 91 SER B 107 1 17 HELIX 20 AC2 GLU B 128 LEU B 130 5 3 HELIX 21 AC3 PRO B 131 ARG B 139 1 9 HELIX 22 AC4 LYS B 174 GLU B 176 5 3 HELIX 23 AC5 ASP B 177 PHE B 189 1 13 HELIX 24 AC6 GLY B 191 VAL B 203 1 13 HELIX 25 AC7 LYS B 206 ARG B 208 5 3 HELIX 26 AC8 GLY B 234 TYR B 238 5 5 HELIX 27 AC9 TRP B 239 LEU B 243 5 5 HELIX 28 AD1 LYS B 257 ARG B 260 5 4 HELIX 29 AD2 GLY B 263 ARG B 279 1 17 HELIX 30 AD3 ILE B 293 ARG B 299 1 7 SHEET 1 AA1 7 GLU A 2 GLU A 5 0 SHEET 2 AA1 7 ARG A 41 ASN A 49 -1 O GLY A 46 N LYS A 4 SHEET 3 AA1 7 ILE A 52 GLN A 61 -1 O ILE A 54 N ALA A 47 SHEET 4 AA1 7 ILE A 75 VAL A 83 -1 O TYR A 77 N LYS A 60 SHEET 5 AA1 7 ILE A 111 CYS A 114 1 O ILE A 111 N GLY A 76 SHEET 6 AA1 7 MET A 303 GLU A 314 -1 O LYS A 313 N LEU A 112 SHEET 7 AA1 7 ILE A 125 PRO A 126 -1 N ILE A 125 O ARG A 309 SHEET 1 AA212 GLU A 2 GLU A 5 0 SHEET 2 AA212 ARG A 41 ASN A 49 -1 O GLY A 46 N LYS A 4 SHEET 3 AA212 ILE A 52 GLN A 61 -1 O ILE A 54 N ALA A 47 SHEET 4 AA212 ILE A 75 VAL A 83 -1 O TYR A 77 N LYS A 60 SHEET 5 AA212 ILE A 111 CYS A 114 1 O ILE A 111 N GLY A 76 SHEET 6 AA212 MET A 303 GLU A 314 -1 O LYS A 313 N LEU A 112 SHEET 7 AA212 TYR A 141 ASP A 153 -1 N ASP A 149 O TRP A 305 SHEET 8 AA212 LYS A 283 GLU A 290 -1 O ILE A 286 N LEU A 150 SHEET 9 AA212 GLY A 248 ILE A 255 1 N LEU A 250 O VAL A 285 SHEET 10 AA212 SER A 218 ASP A 227 -1 N HIS A 224 O GLY A 251 SHEET 11 AA212 ILE A 210 TYR A 215 -1 N ILE A 213 O ILE A 220 SHEET 12 AA212 PHE A 168 VAL A 172 -1 N LYS A 169 O LYS A 214 SHEET 1 AA3 7 GLU B 2 GLU B 5 0 SHEET 2 AA3 7 ARG B 41 ASN B 49 -1 O PHE B 48 N GLU B 2 SHEET 3 AA3 7 ILE B 52 GLN B 61 -1 O ILE B 54 N ALA B 47 SHEET 4 AA3 7 ILE B 75 VAL B 83 -1 O TYR B 77 N LYS B 60 SHEET 5 AA3 7 ILE B 111 CYS B 114 1 O ARG B 113 N ILE B 78 SHEET 6 AA3 7 MET B 303 GLU B 314 -1 O LYS B 313 N LEU B 112 SHEET 7 AA3 7 ILE B 125 PRO B 126 -1 N ILE B 125 O ARG B 309 SHEET 1 AA412 GLU B 2 GLU B 5 0 SHEET 2 AA412 ARG B 41 ASN B 49 -1 O PHE B 48 N GLU B 2 SHEET 3 AA412 ILE B 52 GLN B 61 -1 O ILE B 54 N ALA B 47 SHEET 4 AA412 ILE B 75 VAL B 83 -1 O TYR B 77 N LYS B 60 SHEET 5 AA412 ILE B 111 CYS B 114 1 O ARG B 113 N ILE B 78 SHEET 6 AA412 MET B 303 GLU B 314 -1 O LYS B 313 N LEU B 112 SHEET 7 AA412 LYS B 142 ASP B 153 -1 N GLN B 144 O LYS B 310 SHEET 8 AA412 LYS B 283 GLU B 290 -1 O ILE B 286 N LEU B 150 SHEET 9 AA412 GLY B 248 ILE B 255 1 N LEU B 250 O VAL B 285 SHEET 10 AA412 SER B 218 ASP B 227 -1 N HIS B 224 O GLY B 251 SHEET 11 AA412 ILE B 210 TYR B 215 -1 N ILE B 213 O ILE B 220 SHEET 12 AA412 PHE B 168 VAL B 172 -1 N LYS B 169 O LYS B 214 CISPEP 1 GLY A 251 PRO A 252 0 4.69 CISPEP 2 GLY B 251 PRO B 252 0 5.54 CRYST1 63.000 65.600 89.900 90.00 107.00 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015873 0.000000 0.004853 0.00000 SCALE2 0.000000 0.015244 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011632 0.00000