data_5KI7 # _entry.id 5KI7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5KI7 pdb_00005ki7 10.2210/pdb5ki7/pdb WWPDB D_1000222276 ? ? BMRB 30113 ? 10.13018/BMR30113 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-08-24 2 'Structure model' 1 1 2016-09-21 3 'Structure model' 1 2 2016-11-02 4 'Structure model' 1 3 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' entity 5 4 'Structure model' pdbx_nmr_software 6 4 'Structure model' pdbx_nmr_spectrometer # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_entity.pdbx_number_of_molecules' 4 4 'Structure model' '_pdbx_nmr_software.name' 5 4 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5KI7 _pdbx_database_status.recvd_initial_deposition_date 2016-06-16 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type BMRB . 30113 unspecified PDB . 5KGV unspecified PDB . 5KIB unspecified PDB . 5KIE unspecified PDB . 5KIF unspecified PDB . 5KIH unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Evich, M.' 1 'Spring-Connell, A.M.' 2 'Storici, F.' 3 'Germann, M.W.' 4 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Chembiochem _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1439-7633 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 17 _citation.language ? _citation.page_first 1968 _citation.page_last 1977 _citation.title 'Structural Impact of Single Ribonucleotide Residues in DNA.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/cbic.201600385 _citation.pdbx_database_id_PubMed 27504600 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Evich, M.' 1 ? primary 'Spring-Connell, A.M.' 2 ? primary 'Storici, F.' 3 ? primary 'Germann, M.W.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA/RNA (5'-D(*AP*TP*CP*C)-R(P*G)-D(P*GP*TP*AP*G)-3') ; 2771.823 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*AP*T)-3') ; 2715.799 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polydeoxyribonucleotide/polyribonucleotide hybrid' no no '(DA)(DT)(DC)(DC)G(DG)(DT)(DA)(DG)' ATCCGGTAG A ? 2 polydeoxyribonucleotide no no '(DC)(DT)(DA)(DC)(DC)(DG)(DG)(DA)(DT)' CTACCGGAT B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DA n 1 2 DT n 1 3 DC n 1 4 DC n 1 5 G n 1 6 DG n 1 7 DT n 1 8 DA n 1 9 DG n 2 1 DC n 2 2 DT n 2 3 DA n 2 4 DC n 2 5 DC n 2 6 DG n 2 7 DG n 2 8 DA n 2 9 DT n # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample 1 9 'synthetic construct' ? 32630 ? 2 1 sample 1 9 'synthetic construct' ? 32630 ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DA 1 1 1 DA DA A . n A 1 2 DT 2 2 2 DT DT A . n A 1 3 DC 3 3 3 DC DC A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 G 5 5 5 G G A . n A 1 6 DG 6 6 6 DG DG A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DA 8 8 8 DA DA A . n A 1 9 DG 9 9 9 DG DG A . n B 2 1 DC 1 10 10 DC DC B . n B 2 2 DT 2 11 11 DT DT B . n B 2 3 DA 3 12 12 DA DA B . n B 2 4 DC 4 13 13 DC DC B . n B 2 5 DC 5 14 14 DC DC B . n B 2 6 DG 6 15 15 DG DG B . n B 2 7 DG 7 16 16 DG DG B . n B 2 8 DA 8 17 17 DA DA B . n B 2 9 DT 9 18 18 DT DT B . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5KI7 _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5KI7 _struct.title 'Structural impact of single ribonucleotides in DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5KI7 _struct_keywords.text 'DNA, RNA, Ribonucleotides' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 5KI7 5KI7 ? 1 ? 1 2 PDB 5KI7 5KI7 ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5KI7 A 1 ? 9 ? 5KI7 1 ? 9 ? 1 9 2 2 5KI7 B 1 ? 9 ? 5KI7 10 ? 18 ? 10 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 850 ? 1 MORE -6 ? 1 'SSA (A^2)' 3670 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DA 1 N1 ? ? ? 1_555 B DT 9 N3 ? ? A DA 1 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DA 1 N6 ? ? ? 1_555 B DT 9 O4 ? ? A DA 1 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DT 2 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 2 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 2 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG 7 N1 ? ? A DC 3 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG 7 O6 ? ? A DC 3 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG 7 N2 ? ? A DC 3 B DG 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 4 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 4 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 4 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 N1 ? ? ? 1_555 B DC 5 N3 ? ? A G 5 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 5 N2 ? ? ? 1_555 B DC 5 O2 ? ? A G 5 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 5 O6 ? ? ? 1_555 B DC 5 N4 ? ? A G 5 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 4 N3 ? ? A DG 6 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 4 O2 ? ? A DG 6 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 4 N4 ? ? A DG 6 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 7 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 7 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 2 N3 ? ? A DA 8 B DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 2 O4 ? ? A DA 8 B DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 9 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 9 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 9 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 C4 A DA 1 ? ? C5 A DA 1 ? ? C6 A DA 1 ? ? 113.63 117.00 -3.37 0.50 N 2 1 C5 A DA 1 ? ? C6 A DA 1 ? ? N1 A DA 1 ? ? 121.22 117.70 3.52 0.50 N 3 1 N1 A DA 1 ? ? C6 A DA 1 ? ? N6 A DA 1 ? ? 112.86 118.60 -5.74 0.60 N 4 1 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.29 108.30 1.99 0.30 N 5 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.22 108.30 1.92 0.30 N 6 1 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.47 121.90 -4.43 0.70 N 7 1 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.70 108.30 2.40 0.30 N 8 1 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.13 121.90 -4.77 0.70 N 9 1 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 114.20 108.50 5.70 0.70 N 10 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.87 108.30 3.57 0.30 N 11 1 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.22 117.00 -3.78 0.50 N 12 1 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.11 117.70 3.41 0.50 N 13 1 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 111.74 118.60 -6.86 0.60 N 14 1 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.66 108.30 2.36 0.30 N 15 1 N3 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 117.53 121.90 -4.37 0.70 N 16 1 "O4'" B DT 11 ? ? "C1'" B DT 11 ? ? N1 B DT 11 ? ? 110.82 108.30 2.52 0.30 N 17 1 C6 B DT 11 ? ? C5 B DT 11 ? ? C7 B DT 11 ? ? 118.73 122.90 -4.17 0.60 N 18 1 "O4'" B DA 12 ? ? "C4'" B DA 12 ? ? "C3'" B DA 12 ? ? 109.61 106.00 3.61 0.60 N 19 1 C5 B DA 12 ? ? C6 B DA 12 ? ? N1 B DA 12 ? ? 121.52 117.70 3.82 0.50 N 20 1 N1 B DA 12 ? ? C6 B DA 12 ? ? N6 B DA 12 ? ? 114.43 118.60 -4.17 0.60 N 21 1 N1 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 123.23 118.90 4.33 0.60 N 22 1 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 117.04 121.90 -4.86 0.70 N 23 1 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 113.59 108.30 5.29 0.30 N 24 1 "O4'" B DA 17 ? ? "C4'" B DA 17 ? ? "C3'" B DA 17 ? ? 109.68 106.00 3.68 0.60 N 25 1 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.86 117.00 -3.14 0.50 N 26 1 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 120.90 117.70 3.20 0.50 N 27 1 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 113.89 118.60 -4.71 0.60 N 28 2 C4 A DA 1 ? ? C5 A DA 1 ? ? C6 A DA 1 ? ? 113.35 117.00 -3.65 0.50 N 29 2 C5 A DA 1 ? ? C6 A DA 1 ? ? N1 A DA 1 ? ? 121.03 117.70 3.33 0.50 N 30 2 N1 A DA 1 ? ? C6 A DA 1 ? ? N6 A DA 1 ? ? 112.67 118.60 -5.93 0.60 N 31 2 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.91 108.30 2.61 0.30 N 32 2 "O4'" A DC 3 ? ? "C4'" A DC 3 ? ? "C3'" A DC 3 ? ? 110.17 106.00 4.17 0.60 N 33 2 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 111.12 108.30 2.82 0.30 N 34 2 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 116.96 121.90 -4.94 0.70 N 35 2 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 114.78 108.50 6.28 0.70 N 36 2 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.03 108.30 2.73 0.30 N 37 2 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.13 108.30 1.83 0.30 N 38 2 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.12 122.90 -3.78 0.60 N 39 2 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.34 117.00 -3.66 0.50 N 40 2 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.45 117.70 3.75 0.50 N 41 2 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.34 118.60 -6.26 0.60 N 42 2 "O4'" B DC 10 ? ? "C4'" B DC 10 ? ? "C3'" B DC 10 ? ? 109.80 106.00 3.80 0.60 N 43 2 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.50 108.30 2.20 0.30 N 44 2 N3 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 117.48 121.90 -4.42 0.70 N 45 2 "O4'" B DT 11 ? ? "C1'" B DT 11 ? ? N1 B DT 11 ? ? 110.77 108.30 2.47 0.30 N 46 2 C6 B DT 11 ? ? C5 B DT 11 ? ? C7 B DT 11 ? ? 118.93 122.90 -3.97 0.60 N 47 2 C4 B DA 12 ? ? C5 B DA 12 ? ? C6 B DA 12 ? ? 113.92 117.00 -3.08 0.50 N 48 2 C5 B DA 12 ? ? C6 B DA 12 ? ? N1 B DA 12 ? ? 121.90 117.70 4.20 0.50 N 49 2 N1 B DA 12 ? ? C6 B DA 12 ? ? N6 B DA 12 ? ? 113.92 118.60 -4.68 0.60 N 50 2 "O4'" B DC 14 ? ? "C1'" B DC 14 ? ? N1 B DC 14 ? ? 111.15 108.30 2.85 0.30 N 51 2 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 113.61 108.30 5.31 0.30 N 52 2 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 111.22 108.30 2.92 0.30 N 53 2 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.06 117.70 3.36 0.50 N 54 2 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 114.70 118.60 -3.90 0.60 N 55 3 C4 A DA 1 ? ? C5 A DA 1 ? ? C6 A DA 1 ? ? 113.71 117.00 -3.29 0.50 N 56 3 C5 A DA 1 ? ? C6 A DA 1 ? ? N1 A DA 1 ? ? 121.13 117.70 3.43 0.50 N 57 3 N1 A DA 1 ? ? C6 A DA 1 ? ? N6 A DA 1 ? ? 112.90 118.60 -5.70 0.60 N 58 3 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.56 108.30 2.26 0.30 N 59 3 "O4'" A DC 3 ? ? "C4'" A DC 3 ? ? "C3'" A DC 3 ? ? 109.62 106.00 3.62 0.60 N 60 3 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.20 121.90 -4.70 0.70 N 61 3 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.47 108.30 2.17 0.30 N 62 3 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 116.59 121.90 -5.31 0.70 N 63 3 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 114.12 108.50 5.62 0.70 N 64 3 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 110.33 106.00 4.33 0.60 N 65 3 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.92 108.30 2.62 0.30 N 66 3 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.91 117.00 -3.09 0.50 N 67 3 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.05 118.60 -5.55 0.60 N 68 3 N1 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 122.88 118.90 3.98 0.60 N 69 3 N3 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 116.52 121.90 -5.38 0.70 N 70 3 C6 B DT 11 ? ? C5 B DT 11 ? ? C7 B DT 11 ? ? 119.15 122.90 -3.75 0.60 N 71 3 C5 B DA 12 ? ? C6 B DA 12 ? ? N1 B DA 12 ? ? 121.28 117.70 3.58 0.50 N 72 3 N1 B DA 12 ? ? C6 B DA 12 ? ? N6 B DA 12 ? ? 114.39 118.60 -4.21 0.60 N 73 3 "O4'" B DC 14 ? ? "C1'" B DC 14 ? ? N1 B DC 14 ? ? 110.65 108.30 2.35 0.30 N 74 3 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 112.50 108.30 4.20 0.30 N 75 3 "O4'" B DG 16 ? ? "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? 109.63 106.00 3.63 0.60 N 76 3 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 110.14 108.30 1.84 0.30 N 77 3 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.58 117.00 -3.42 0.50 N 78 3 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.48 117.70 3.78 0.50 N 79 3 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 114.23 118.60 -4.37 0.60 N 80 4 C4 A DA 1 ? ? C5 A DA 1 ? ? C6 A DA 1 ? ? 113.75 117.00 -3.25 0.50 N 81 4 C5 A DA 1 ? ? C6 A DA 1 ? ? N1 A DA 1 ? ? 120.83 117.70 3.13 0.50 N 82 4 N1 A DA 1 ? ? C6 A DA 1 ? ? N6 A DA 1 ? ? 113.43 118.60 -5.17 0.60 N 83 4 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.32 108.30 2.02 0.30 N 84 4 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.58 121.90 -4.32 0.70 N 85 4 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.56 108.30 2.26 0.30 N 86 4 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.35 121.90 -4.55 0.70 N 87 4 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 113.62 108.50 5.12 0.70 N 88 4 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 110.01 106.00 4.01 0.60 N 89 4 "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? "C1'" A DG 6 ? ? 110.00 102.50 7.50 1.20 N 90 4 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.01 108.30 2.71 0.30 N 91 4 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.42 108.30 2.12 0.30 N 92 4 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.39 117.00 -3.61 0.50 N 93 4 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 120.95 117.70 3.25 0.50 N 94 4 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.72 118.60 -5.88 0.60 N 95 4 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.13 108.30 1.83 0.30 N 96 4 N3 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 117.24 121.90 -4.66 0.70 N 97 4 "O4'" B DT 11 ? ? "C1'" B DT 11 ? ? N1 B DT 11 ? ? 111.05 108.30 2.75 0.30 N 98 4 C6 B DT 11 ? ? C5 B DT 11 ? ? C7 B DT 11 ? ? 119.21 122.90 -3.69 0.60 N 99 4 C4 B DA 12 ? ? C5 B DA 12 ? ? C6 B DA 12 ? ? 113.83 117.00 -3.17 0.50 N 100 4 C5 B DA 12 ? ? C6 B DA 12 ? ? N1 B DA 12 ? ? 121.65 117.70 3.95 0.50 N 101 4 N1 B DA 12 ? ? C6 B DA 12 ? ? N6 B DA 12 ? ? 114.44 118.60 -4.16 0.60 N 102 4 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 110.50 108.30 2.20 0.30 N 103 4 N1 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 122.52 118.90 3.62 0.60 N 104 4 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 117.53 121.90 -4.37 0.70 N 105 4 N1 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 122.66 118.90 3.76 0.60 N 106 4 N3 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 117.20 121.90 -4.70 0.70 N 107 4 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 113.66 108.30 5.36 0.30 N 108 4 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 110.19 108.30 1.89 0.30 N 109 4 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.53 117.00 -3.47 0.50 N 110 4 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.62 117.70 3.92 0.50 N 111 4 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 114.41 118.60 -4.19 0.60 N 112 5 C5 A DA 1 ? ? C6 A DA 1 ? ? N1 A DA 1 ? ? 120.90 117.70 3.20 0.50 N 113 5 N1 A DA 1 ? ? C6 A DA 1 ? ? N6 A DA 1 ? ? 113.05 118.60 -5.55 0.60 N 114 5 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 112.72 108.30 4.42 0.30 N 115 5 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.40 121.90 -4.50 0.70 N 116 5 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.51 108.30 2.21 0.30 N 117 5 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.43 121.90 -4.47 0.70 N 118 5 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 115.43 108.50 6.93 0.70 N 119 5 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 110.43 106.00 4.43 0.60 N 120 5 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.44 108.30 3.14 0.30 N 121 5 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 110.27 108.30 1.97 0.30 N 122 5 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.54 117.00 -3.46 0.50 N 123 5 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 120.97 117.70 3.27 0.50 N 124 5 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.25 118.60 -6.35 0.60 N 125 5 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.66 108.30 2.36 0.30 N 126 5 N3 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 117.48 121.90 -4.42 0.70 N 127 5 "O4'" B DA 12 ? ? "C4'" B DA 12 ? ? "C3'" B DA 12 ? ? 109.82 106.00 3.82 0.60 N 128 5 C4 B DA 12 ? ? C5 B DA 12 ? ? C6 B DA 12 ? ? 113.95 117.00 -3.05 0.50 N 129 5 C5 B DA 12 ? ? C6 B DA 12 ? ? N1 B DA 12 ? ? 121.44 117.70 3.74 0.50 N 130 5 N1 B DA 12 ? ? C6 B DA 12 ? ? N6 B DA 12 ? ? 114.93 118.60 -3.67 0.60 N 131 5 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 110.40 108.30 2.10 0.30 N 132 5 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 117.60 121.90 -4.30 0.70 N 133 5 "O4'" B DC 14 ? ? "C1'" B DC 14 ? ? N1 B DC 14 ? ? 111.30 108.30 3.00 0.30 N 134 5 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 113.57 108.30 5.27 0.30 N 135 5 "O4'" B DG 16 ? ? "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? 109.85 106.00 3.85 0.60 N 136 5 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 120.76 117.70 3.06 0.50 N 137 5 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 114.89 118.60 -3.71 0.60 N 138 6 C4 A DA 1 ? ? C5 A DA 1 ? ? C6 A DA 1 ? ? 113.93 117.00 -3.07 0.50 N 139 6 C5 A DA 1 ? ? C6 A DA 1 ? ? N1 A DA 1 ? ? 121.20 117.70 3.50 0.50 N 140 6 N1 A DA 1 ? ? C6 A DA 1 ? ? N6 A DA 1 ? ? 113.29 118.60 -5.31 0.60 N 141 6 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.45 108.30 2.15 0.30 N 142 6 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 111.41 108.30 3.11 0.30 N 143 6 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.56 108.30 2.26 0.30 N 144 6 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.33 121.90 -4.57 0.70 N 145 6 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 113.92 108.50 5.42 0.70 N 146 6 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 109.85 106.00 3.85 0.60 N 147 6 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.44 108.30 2.14 0.30 N 148 6 N3 A DT 7 ? ? C2 A DT 7 ? ? O2 A DT 7 ? ? 118.68 122.30 -3.62 0.60 N 149 6 C6 A DT 7 ? ? C5 A DT 7 ? ? C7 A DT 7 ? ? 119.19 122.90 -3.71 0.60 N 150 6 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.91 117.00 -3.09 0.50 N 151 6 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 120.90 117.70 3.20 0.50 N 152 6 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.38 118.60 -5.22 0.60 N 153 6 N1 A DG 9 ? ? C6 A DG 9 ? ? O6 A DG 9 ? ? 115.96 119.90 -3.94 0.60 N 154 6 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 111.46 108.30 3.16 0.30 N 155 6 N3 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 117.48 121.90 -4.42 0.70 N 156 6 C6 B DT 11 ? ? C5 B DT 11 ? ? C7 B DT 11 ? ? 118.39 122.90 -4.51 0.60 N 157 6 C5 B DA 12 ? ? C6 B DA 12 ? ? N1 B DA 12 ? ? 120.97 117.70 3.27 0.50 N 158 6 N1 B DA 12 ? ? C6 B DA 12 ? ? N6 B DA 12 ? ? 114.00 118.60 -4.60 0.60 N 159 6 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 117.50 121.90 -4.40 0.70 N 160 6 "O4'" B DC 14 ? ? "C1'" B DC 14 ? ? N1 B DC 14 ? ? 110.53 108.30 2.23 0.30 N 161 6 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 113.43 108.30 5.13 0.30 N 162 6 "O4'" B DG 16 ? ? "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? 110.18 106.00 4.18 0.60 N 163 6 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 111.12 108.30 2.82 0.30 N 164 6 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.99 117.00 -3.01 0.50 N 165 6 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.40 117.70 3.70 0.50 N 166 7 C4 A DA 1 ? ? C5 A DA 1 ? ? C6 A DA 1 ? ? 113.66 117.00 -3.34 0.50 N 167 7 C5 A DA 1 ? ? C6 A DA 1 ? ? N1 A DA 1 ? ? 121.04 117.70 3.34 0.50 N 168 7 N1 A DA 1 ? ? C6 A DA 1 ? ? N6 A DA 1 ? ? 112.59 118.60 -6.01 0.60 N 169 7 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 111.32 108.30 3.02 0.30 N 170 7 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.13 108.30 1.83 0.30 N 171 7 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.66 108.30 2.36 0.30 N 172 7 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.56 121.90 -4.34 0.70 N 173 7 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 113.88 108.50 5.38 0.70 N 174 7 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.51 117.00 -3.49 0.50 N 175 7 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.03 117.70 3.33 0.50 N 176 7 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.07 118.60 -6.53 0.60 N 177 7 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 111.61 108.30 3.31 0.30 N 178 7 N3 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 117.34 121.90 -4.56 0.70 N 179 7 "O4'" B DT 11 ? ? "C4'" B DT 11 ? ? "C3'" B DT 11 ? ? 109.80 106.00 3.80 0.60 N 180 7 "O4'" B DT 11 ? ? "C1'" B DT 11 ? ? N1 B DT 11 ? ? 110.22 108.30 1.92 0.30 N 181 7 C4 B DA 12 ? ? C5 B DA 12 ? ? C6 B DA 12 ? ? 113.74 117.00 -3.26 0.50 N 182 7 C5 B DA 12 ? ? C6 B DA 12 ? ? N1 B DA 12 ? ? 122.17 117.70 4.47 0.50 N 183 7 "O4'" B DC 14 ? ? "C1'" B DC 14 ? ? N1 B DC 14 ? ? 111.03 108.30 2.73 0.30 N 184 7 N3 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 117.40 121.90 -4.50 0.70 N 185 7 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 111.04 108.30 2.74 0.30 N 186 7 "O4'" B DG 16 ? ? "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? 109.61 106.00 3.61 0.60 N 187 7 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 110.27 108.30 1.97 0.30 N 188 7 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.84 117.00 -3.16 0.50 N 189 7 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.16 117.70 3.46 0.50 N 190 7 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 114.30 118.60 -4.30 0.60 N 191 8 C4 A DA 1 ? ? C5 A DA 1 ? ? C6 A DA 1 ? ? 113.35 117.00 -3.65 0.50 N 192 8 C5 A DA 1 ? ? C6 A DA 1 ? ? N1 A DA 1 ? ? 121.21 117.70 3.51 0.50 N 193 8 N1 A DA 1 ? ? C6 A DA 1 ? ? N6 A DA 1 ? ? 112.37 118.60 -6.23 0.60 N 194 8 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.34 108.30 2.04 0.30 N 195 8 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.53 108.30 2.23 0.30 N 196 8 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.42 108.30 2.12 0.30 N 197 8 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.51 121.90 -4.39 0.70 N 198 8 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 114.25 108.50 5.75 0.70 N 199 8 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 110.47 106.00 4.47 0.60 N 200 8 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 112.06 108.30 3.76 0.30 N 201 8 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.62 108.30 3.32 0.30 N 202 8 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.73 117.00 -3.27 0.50 N 203 8 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.16 117.70 3.46 0.50 N 204 8 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.60 118.60 -5.00 0.60 N 205 8 "O4'" B DC 10 ? ? "C4'" B DC 10 ? ? "C3'" B DC 10 ? ? 110.19 106.00 4.19 0.60 N 206 8 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.31 108.30 2.01 0.30 N 207 8 "O4'" B DT 11 ? ? "C1'" B DT 11 ? ? N1 B DT 11 ? ? 111.17 108.30 2.87 0.30 N 208 8 C6 B DT 11 ? ? C5 B DT 11 ? ? C7 B DT 11 ? ? 119.21 122.90 -3.69 0.60 N 209 8 C5 B DA 12 ? ? C6 B DA 12 ? ? N1 B DA 12 ? ? 121.80 117.70 4.10 0.50 N 210 8 N1 B DA 12 ? ? C6 B DA 12 ? ? N6 B DA 12 ? ? 114.91 118.60 -3.69 0.60 N 211 8 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 110.24 108.30 1.94 0.30 N 212 8 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 114.57 108.30 6.27 0.30 N 213 8 "O4'" B DG 16 ? ? "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? 110.43 106.00 4.43 0.60 N 214 8 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 111.60 108.30 3.30 0.30 N 215 8 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.43 117.70 3.73 0.50 N 216 8 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 114.68 118.60 -3.92 0.60 N 217 9 C4 A DA 1 ? ? C5 A DA 1 ? ? C6 A DA 1 ? ? 113.17 117.00 -3.83 0.50 N 218 9 C5 A DA 1 ? ? C6 A DA 1 ? ? N1 A DA 1 ? ? 121.25 117.70 3.55 0.50 N 219 9 N1 A DA 1 ? ? C6 A DA 1 ? ? N6 A DA 1 ? ? 112.42 118.60 -6.18 0.60 N 220 9 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.89 108.30 2.59 0.30 N 221 9 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.57 121.90 -4.33 0.70 N 222 9 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.63 108.30 2.33 0.30 N 223 9 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.51 121.90 -4.39 0.70 N 224 9 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 113.67 108.50 5.17 0.70 N 225 9 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 110.55 106.00 4.55 0.60 N 226 9 "C3'" A DG 6 ? ? "C2'" A DG 6 ? ? "C1'" A DG 6 ? ? 110.26 102.50 7.76 1.20 N 227 9 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.66 108.30 3.36 0.30 N 228 9 "O4'" A DT 7 ? ? "C1'" A DT 7 ? ? N1 A DT 7 ? ? 111.42 108.30 3.12 0.30 N 229 9 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.86 117.00 -3.14 0.50 N 230 9 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 120.83 117.70 3.13 0.50 N 231 9 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.00 118.60 -5.60 0.60 N 232 9 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 111.83 108.30 3.53 0.30 N 233 9 "O4'" B DT 11 ? ? "C1'" B DT 11 ? ? N1 B DT 11 ? ? 110.39 108.30 2.09 0.30 N 234 9 C6 B DT 11 ? ? C5 B DT 11 ? ? C7 B DT 11 ? ? 118.31 122.90 -4.59 0.60 N 235 9 C4 B DA 12 ? ? C5 B DA 12 ? ? C6 B DA 12 ? ? 113.95 117.00 -3.05 0.50 N 236 9 C5 B DA 12 ? ? C6 B DA 12 ? ? N1 B DA 12 ? ? 121.70 117.70 4.00 0.50 N 237 9 N1 B DA 12 ? ? C6 B DA 12 ? ? N6 B DA 12 ? ? 114.29 118.60 -4.31 0.60 N 238 9 "O4'" B DC 14 ? ? "C1'" B DC 14 ? ? N1 B DC 14 ? ? 110.70 108.30 2.40 0.30 N 239 9 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 112.45 108.30 4.15 0.30 N 240 9 "O4'" B DA 17 ? ? "C1'" B DA 17 ? ? N9 B DA 17 ? ? 111.89 108.30 3.59 0.30 N 241 9 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.76 117.00 -3.24 0.50 N 242 9 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 121.36 117.70 3.66 0.50 N 243 9 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 114.21 118.60 -4.39 0.60 N 244 10 C4 A DA 1 ? ? C5 A DA 1 ? ? C6 A DA 1 ? ? 113.67 117.00 -3.33 0.50 N 245 10 C5 A DA 1 ? ? C6 A DA 1 ? ? N1 A DA 1 ? ? 120.96 117.70 3.26 0.50 N 246 10 N1 A DA 1 ? ? C6 A DA 1 ? ? N6 A DA 1 ? ? 112.94 118.60 -5.66 0.60 N 247 10 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.61 108.30 2.31 0.30 N 248 10 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 110.89 108.30 2.59 0.30 N 249 10 N3 A DC 3 ? ? C2 A DC 3 ? ? O2 A DC 3 ? ? 117.06 121.90 -4.84 0.70 N 250 10 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.28 121.90 -4.62 0.70 N 251 10 "O4'" A G 5 ? ? "C1'" A G 5 ? ? N9 A G 5 ? ? 114.98 108.50 6.48 0.70 N 252 10 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.46 108.30 2.16 0.30 N 253 10 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.72 117.00 -3.28 0.50 N 254 10 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 120.79 117.70 3.09 0.50 N 255 10 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.00 118.60 -5.60 0.60 N 256 10 "O4'" B DC 10 ? ? "C1'" B DC 10 ? ? N1 B DC 10 ? ? 110.56 108.30 2.26 0.30 N 257 10 N1 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 122.78 118.90 3.88 0.60 N 258 10 N3 B DC 10 ? ? C2 B DC 10 ? ? O2 B DC 10 ? ? 116.07 121.90 -5.83 0.70 N 259 10 C5 B DA 12 ? ? C6 B DA 12 ? ? N1 B DA 12 ? ? 122.01 117.70 4.31 0.50 N 260 10 "O4'" B DC 13 ? ? "C1'" B DC 13 ? ? N1 B DC 13 ? ? 110.17 108.30 1.87 0.30 N 261 10 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 117.39 121.90 -4.51 0.70 N 262 10 "O4'" B DC 14 ? ? "C1'" B DC 14 ? ? N1 B DC 14 ? ? 110.16 108.30 1.86 0.30 N 263 10 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 112.00 108.30 3.70 0.30 N 264 10 C4 B DA 17 ? ? C5 B DA 17 ? ? C6 B DA 17 ? ? 113.92 117.00 -3.08 0.50 N 265 10 C5 B DA 17 ? ? C6 B DA 17 ? ? N1 B DA 17 ? ? 120.81 117.70 3.11 0.50 N 266 10 N1 B DA 17 ? ? C6 B DA 17 ? ? N6 B DA 17 ? ? 114.28 118.60 -4.32 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DA A 1 ? ? 0.081 'SIDE CHAIN' 2 1 G A 5 ? ? 0.113 'SIDE CHAIN' 3 1 DC B 10 ? ? 0.093 'SIDE CHAIN' 4 1 DG B 15 ? ? 0.054 'SIDE CHAIN' 5 2 DT A 2 ? ? 0.067 'SIDE CHAIN' 6 2 DC A 3 ? ? 0.083 'SIDE CHAIN' 7 2 G A 5 ? ? 0.136 'SIDE CHAIN' 8 2 DA A 8 ? ? 0.064 'SIDE CHAIN' 9 2 DA B 12 ? ? 0.066 'SIDE CHAIN' 10 2 DC B 14 ? ? 0.073 'SIDE CHAIN' 11 2 DG B 15 ? ? 0.077 'SIDE CHAIN' 12 3 G A 5 ? ? 0.157 'SIDE CHAIN' 13 3 DT A 7 ? ? 0.082 'SIDE CHAIN' 14 3 DA A 8 ? ? 0.089 'SIDE CHAIN' 15 3 DT B 11 ? ? 0.083 'SIDE CHAIN' 16 3 DC B 14 ? ? 0.073 'SIDE CHAIN' 17 4 DC A 3 ? ? 0.073 'SIDE CHAIN' 18 4 G A 5 ? ? 0.125 'SIDE CHAIN' 19 4 DG A 6 ? ? 0.065 'SIDE CHAIN' 20 4 DT A 7 ? ? 0.091 'SIDE CHAIN' 21 4 DA A 8 ? ? 0.075 'SIDE CHAIN' 22 4 DG A 9 ? ? 0.062 'SIDE CHAIN' 23 4 DC B 14 ? ? 0.062 'SIDE CHAIN' 24 4 DG B 15 ? ? 0.065 'SIDE CHAIN' 25 5 DT A 2 ? ? 0.061 'SIDE CHAIN' 26 5 DC A 3 ? ? 0.066 'SIDE CHAIN' 27 5 G A 5 ? ? 0.125 'SIDE CHAIN' 28 5 DT B 11 ? ? 0.082 'SIDE CHAIN' 29 5 DC B 14 ? ? 0.105 'SIDE CHAIN' 30 6 DA A 1 ? ? 0.050 'SIDE CHAIN' 31 6 G A 5 ? ? 0.132 'SIDE CHAIN' 32 6 DC B 13 ? ? 0.070 'SIDE CHAIN' 33 6 DG B 15 ? ? 0.102 'SIDE CHAIN' 34 6 DT B 18 ? ? 0.063 'SIDE CHAIN' 35 7 DC A 3 ? ? 0.089 'SIDE CHAIN' 36 7 G A 5 ? ? 0.132 'SIDE CHAIN' 37 7 DG A 6 ? ? 0.076 'SIDE CHAIN' 38 7 DT A 7 ? ? 0.099 'SIDE CHAIN' 39 7 DC B 10 ? ? 0.074 'SIDE CHAIN' 40 7 DC B 14 ? ? 0.099 'SIDE CHAIN' 41 7 DG B 15 ? ? 0.060 'SIDE CHAIN' 42 8 DC A 3 ? ? 0.092 'SIDE CHAIN' 43 8 G A 5 ? ? 0.119 'SIDE CHAIN' 44 8 DA A 8 ? ? 0.071 'SIDE CHAIN' 45 8 DC B 14 ? ? 0.065 'SIDE CHAIN' 46 8 DG B 15 ? ? 0.060 'SIDE CHAIN' 47 9 G A 5 ? ? 0.117 'SIDE CHAIN' 48 9 DT A 7 ? ? 0.082 'SIDE CHAIN' 49 9 DA A 8 ? ? 0.071 'SIDE CHAIN' 50 9 DT B 11 ? ? 0.082 'SIDE CHAIN' 51 9 DC B 14 ? ? 0.073 'SIDE CHAIN' 52 9 DG B 15 ? ? 0.083 'SIDE CHAIN' 53 10 DA A 1 ? ? 0.063 'SIDE CHAIN' 54 10 DT A 2 ? ? 0.059 'SIDE CHAIN' 55 10 DC A 3 ? ? 0.074 'SIDE CHAIN' 56 10 G A 5 ? ? 0.097 'SIDE CHAIN' 57 10 DT A 7 ? ? 0.071 'SIDE CHAIN' 58 10 DA A 8 ? ? 0.076 'SIDE CHAIN' 59 10 DC B 14 ? ? 0.088 'SIDE CHAIN' 60 10 DT B 18 ? ? 0.081 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 5KI7 _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'back calculated data agree with experimental NOESY spectrum' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5KI7 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 ;1 mM DNA/RNA (5'-D(*AP*TP*CP*C)-R(P*G)-D(P*GP*TP*AP*G)-3'), 1 mM DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*AP*T)-3'), 100 % 100% deuterium D2O, 100 mM sodium chloride, 10 mM sodium phosphate, 100% D2O ; '100% D2O' D2O_sample solution '100% D2O, pH* 6.6' 2 ;1 mM DNA/RNA (5'-D(*AP*TP*CP*C)-R(P*G)-D(P*GP*TP*AP*G)-3'), 1 mM DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*AP*T)-3'), 100 mM sodium chloride, 10 mM sodium phosphate, 10 % 100% deuterium D2O, 90% H2O/10% D2O ; '90% H2O/10% D2O' H2O_sample solid '90% H2O, 10% D2O, pH 7.0' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ;DNA/RNA (5'-D(*AP*TP*CP*C)-R(P*G)-D(P*GP*TP*AP*G)-3') ; 1 ? mM 'natural abundance' 1 ;DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*AP*T)-3') ; 1 ? mM 'natural abundance' 1 D2O 100 ? % '100% deuterium' 1 'sodium chloride' 100 ? mM 'natural abundance' 1 'sodium phosphate' 10 ? mM 'natural abundance' 2 ;DNA/RNA (5'-D(*AP*TP*CP*C)-R(P*G)-D(P*GP*TP*AP*G)-3') ; 1 ? mM 'natural abundance' 2 ;DNA (5'-D(*CP*TP*AP*CP*CP*GP*GP*AP*T)-3') ; 1 ? mM 'natural abundance' 2 'sodium chloride' 100 ? mM 'natural abundance' 2 'sodium phosphate' 10 ? mM 'natural abundance' 2 D2O 10 ? % '100% deuterium' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 294 atm ambient 6.6 110 ? ? mM D2O_conditions ? pH* ? ? K 2 294 atm ambient 7.0 110 ? ? mM H2O_conditions ? pH ? ? K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D NOESY 250 ms' 1 isotropic 2 2 2 '2D NOESY' 1 isotropic 3 1 1 '2D Low Flip COSY' 1 isotropic 4 1 1 '2D 1H-13C HSQC' 2 isotropic 5 1 1 '2D 1H-31P CORR' 1 isotropic 6 1 1 '2D constant time NOESY' 1 isotropic 7 1 1 '2D NOESY 150 ms' 1 isotropic 8 1 1 '1D 1H' 1 isotropic 10 1 1 '1D 31P' 1 isotropic 9 2 2 '1D 1H 1-1 jump and return' 1 isotropic # _pdbx_nmr_refine.entry_id 5KI7 _pdbx_nmr_refine.method 'matrix relaxation, molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 5 # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 'structure calculation' Amber 9 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 2 'chemical shift assignment' Sparky 3.33 Goddard 3 collection TopSpin ? 'Bruker Biospin' 4 refinement CORMA ? 'Thomas James' 5 processing MARDIGRAS ? 'Thomas James' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 G OP3 O N N 144 G P P N N 145 G OP1 O N N 146 G OP2 O N N 147 G "O5'" O N N 148 G "C5'" C N N 149 G "C4'" C N R 150 G "O4'" O N N 151 G "C3'" C N S 152 G "O3'" O N N 153 G "C2'" C N R 154 G "O2'" O N N 155 G "C1'" C N R 156 G N9 N Y N 157 G C8 C Y N 158 G N7 N Y N 159 G C5 C Y N 160 G C6 C N N 161 G O6 O N N 162 G N1 N N N 163 G C2 C N N 164 G N2 N N N 165 G N3 N N N 166 G C4 C Y N 167 G HOP3 H N N 168 G HOP2 H N N 169 G "H5'" H N N 170 G "H5''" H N N 171 G "H4'" H N N 172 G "H3'" H N N 173 G "HO3'" H N N 174 G "H2'" H N N 175 G "HO2'" H N N 176 G "H1'" H N N 177 G H8 H N N 178 G H1 H N N 179 G H21 H N N 180 G H22 H N N 181 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 G OP3 P sing N N 150 G OP3 HOP3 sing N N 151 G P OP1 doub N N 152 G P OP2 sing N N 153 G P "O5'" sing N N 154 G OP2 HOP2 sing N N 155 G "O5'" "C5'" sing N N 156 G "C5'" "C4'" sing N N 157 G "C5'" "H5'" sing N N 158 G "C5'" "H5''" sing N N 159 G "C4'" "O4'" sing N N 160 G "C4'" "C3'" sing N N 161 G "C4'" "H4'" sing N N 162 G "O4'" "C1'" sing N N 163 G "C3'" "O3'" sing N N 164 G "C3'" "C2'" sing N N 165 G "C3'" "H3'" sing N N 166 G "O3'" "HO3'" sing N N 167 G "C2'" "O2'" sing N N 168 G "C2'" "C1'" sing N N 169 G "C2'" "H2'" sing N N 170 G "O2'" "HO2'" sing N N 171 G "C1'" N9 sing N N 172 G "C1'" "H1'" sing N N 173 G N9 C8 sing Y N 174 G N9 C4 sing Y N 175 G C8 N7 doub Y N 176 G C8 H8 sing N N 177 G N7 C5 sing Y N 178 G C5 C6 sing N N 179 G C5 C4 doub Y N 180 G C6 O6 doub N N 181 G C6 N1 sing N N 182 G N1 C2 sing N N 183 G N1 H1 sing N N 184 G C2 N2 sing N N 185 G C2 N3 doub N N 186 G N2 H21 sing N N 187 G N2 H22 sing N N 188 G N3 C4 sing N N 189 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5KI7 'double helix' 5KI7 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DA 1 1_555 B DT 9 1_555 -0.020 -0.036 -0.753 -9.310 1.760 4.743 1 A_DA1:DT18_B A 1 ? B 18 ? 20 1 1 A DT 2 1_555 B DA 8 1_555 0.089 -0.043 -0.231 -3.893 -2.029 0.971 2 A_DT2:DA17_B A 2 ? B 17 ? 20 1 1 A DC 3 1_555 B DG 7 1_555 0.163 -0.083 -0.231 -2.332 5.845 -4.355 3 A_DC3:DG16_B A 3 ? B 16 ? 19 1 1 A DC 4 1_555 B DG 6 1_555 -0.069 0.033 -0.412 7.159 -11.007 -0.426 4 A_DC4:DG15_B A 4 ? B 15 ? 19 1 1 A G 5 1_555 B DC 5 1_555 -0.093 -0.037 -0.012 2.195 8.437 -0.614 5 A_G5:DC14_B A 5 ? B 14 ? 19 1 1 A DG 6 1_555 B DC 4 1_555 -0.209 -0.121 0.049 3.730 -18.707 -3.879 6 A_DG6:DC13_B A 6 ? B 13 ? 19 1 1 A DT 7 1_555 B DA 3 1_555 -0.332 0.018 -0.518 10.659 -20.708 -5.084 7 A_DT7:DA12_B A 7 ? B 12 ? 20 1 1 A DA 8 1_555 B DT 2 1_555 0.264 0.007 0.055 6.480 -19.813 3.631 8 A_DA8:DT11_B A 8 ? B 11 ? 20 1 1 A DG 9 1_555 B DC 1 1_555 -0.248 -0.131 -0.865 -17.725 -21.298 4.884 9 A_DG9:DC10_B A 9 ? B 10 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DA 1 1_555 B DT 9 1_555 A DT 2 1_555 B DA 8 1_555 -0.560 -1.093 3.356 -4.268 -2.235 25.232 -1.795 -0.009 3.484 -5.057 9.659 25.680 1 AA_DA1DT2:DA17DT18_BB A 1 ? B 18 ? A 2 ? B 17 ? 1 A DT 2 1_555 B DA 8 1_555 A DC 3 1_555 B DG 7 1_555 -0.546 -1.024 3.318 -1.172 5.402 34.322 -2.535 0.737 3.141 9.081 1.970 34.751 2 AA_DT2DC3:DG16DA17_BB A 2 ? B 17 ? A 3 ? B 16 ? 1 A DC 3 1_555 B DG 7 1_555 A DC 4 1_555 B DG 6 1_555 0.416 -1.581 3.168 1.259 5.372 28.592 -4.237 -0.572 2.845 10.751 -2.520 29.109 3 AA_DC3DC4:DG15DG16_BB A 3 ? B 16 ? A 4 ? B 15 ? 1 A DC 4 1_555 B DG 6 1_555 A G 5 1_555 B DC 5 1_555 -0.305 -1.671 3.604 -5.796 11.246 19.231 -8.090 -1.243 2.287 29.843 15.379 22.987 4 AA_DC4G5:DC14DG15_BB A 4 ? B 15 ? A 5 ? B 14 ? 1 A G 5 1_555 B DC 5 1_555 A DG 6 1_555 B DC 4 1_555 -1.862 0.189 3.420 -1.396 -0.005 36.405 0.303 2.774 3.486 -0.008 2.234 36.431 5 AA_G5DG6:DC13DC14_BB A 5 ? B 14 ? A 6 ? B 13 ? 1 A DG 6 1_555 B DC 4 1_555 A DT 7 1_555 B DA 3 1_555 -0.313 -0.351 3.109 6.894 1.808 31.033 -0.950 1.753 2.948 3.324 -12.675 31.822 6 AA_DG6DT7:DA12DC13_BB A 6 ? B 13 ? A 7 ? B 12 ? 1 A DT 7 1_555 B DA 3 1_555 A DA 8 1_555 B DT 2 1_555 1.701 0.741 3.720 1.411 -1.027 44.033 1.098 -2.115 3.753 -1.369 -1.881 44.066 7 AA_DT7DA8:DT11DA12_BB A 7 ? B 12 ? A 8 ? B 11 ? 1 A DA 8 1_555 B DT 2 1_555 A DG 9 1_555 B DC 1 1_555 0.033 -0.976 4.356 -0.762 9.772 33.665 -3.523 -0.203 3.927 16.445 1.282 35.023 8 AA_DA8DG9:DC10DT11_BB A 8 ? B 11 ? A 9 ? B 10 ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 AVANCE ? Bruker 600 ? 2 'AVANCE III' ? Bruker 850 ? # _atom_sites.entry_id 5KI7 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_