HEADER HYDROLASE 26-JUN-16 5KM3 TITLE HUMAN HISTIDINE TRIAD NUCLEOTIDE BINDING PROTEIN 1 (HHINT1) UMP TITLE 2 CATALYTIC PRODUCT COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ADENOSINE 5'-MONOPHOSPHORAMIDASE; COMPND 5 EC: 3.-.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HINT1, HINT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS HINT, HISTIDINE TRIAD, HIT, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.M.MAIZE,B.C.FINZEL REVDAT 5 27-SEP-23 5KM3 1 JRNL REMARK REVDAT 4 15-NOV-17 5KM3 1 JRNL REVDAT 3 18-OCT-17 5KM3 1 JRNL REVDAT 2 26-JUL-17 5KM3 1 JRNL REVDAT 1 28-JUN-17 5KM3 0 JRNL AUTH K.M.MAIZE,R.SHAH,A.STROM,S.KUMARAPPERUMA,A.ZHOU,C.R.WAGNER, JRNL AUTH 2 B.C.FINZEL JRNL TITL A CRYSTAL STRUCTURE BASED GUIDE TO THE DESIGN OF HUMAN JRNL TITL 2 HISTIDINE TRIAD NUCLEOTIDE BINDING PROTEIN 1 (HHINT1) JRNL TITL 3 ACTIVATED PROTIDES. JRNL REF MOL. PHARM. V. 14 3987 2017 JRNL REFN ESSN 1543-8392 JRNL PMID 28968488 JRNL DOI 10.1021/ACS.MOLPHARMACEUT.7B00664 REMARK 2 REMARK 2 RESOLUTION. 1.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 70274 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 3433 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 63.7606 - 3.5087 0.96 2704 138 0.1445 0.1557 REMARK 3 2 3.5087 - 2.7849 0.99 2688 169 0.1558 0.1776 REMARK 3 3 2.7849 - 2.4329 0.99 2700 156 0.1647 0.1657 REMARK 3 4 2.4329 - 2.2104 0.99 2675 168 0.1499 0.1709 REMARK 3 5 2.2104 - 2.0520 0.99 2684 148 0.1505 0.1616 REMARK 3 6 2.0520 - 1.9310 0.99 2708 130 0.1523 0.1586 REMARK 3 7 1.9310 - 1.8343 1.00 2705 126 0.1515 0.1598 REMARK 3 8 1.8343 - 1.7544 1.00 2709 121 0.1581 0.1950 REMARK 3 9 1.7544 - 1.6869 1.00 2712 136 0.1588 0.1860 REMARK 3 10 1.6869 - 1.6287 1.00 2729 112 0.1569 0.1700 REMARK 3 11 1.6287 - 1.5777 1.00 2693 148 0.1533 0.1743 REMARK 3 12 1.5777 - 1.5326 1.00 2691 145 0.1556 0.1712 REMARK 3 13 1.5326 - 1.4923 0.99 2664 131 0.1621 0.1690 REMARK 3 14 1.4923 - 1.4559 1.00 2676 139 0.1608 0.1949 REMARK 3 15 1.4559 - 1.4228 1.00 2701 139 0.1719 0.1921 REMARK 3 16 1.4228 - 1.3925 1.00 2707 134 0.1799 0.2170 REMARK 3 17 1.3925 - 1.3646 1.00 2688 123 0.1857 0.2209 REMARK 3 18 1.3646 - 1.3389 1.00 2687 139 0.1948 0.2456 REMARK 3 19 1.3389 - 1.3150 1.00 2676 148 0.1914 0.2149 REMARK 3 20 1.3150 - 1.2927 1.00 2659 157 0.1987 0.2258 REMARK 3 21 1.2927 - 1.2718 1.00 2705 144 0.2002 0.2396 REMARK 3 22 1.2718 - 1.2522 1.00 2656 124 0.2110 0.2071 REMARK 3 23 1.2522 - 1.2338 0.99 2696 124 0.2155 0.2343 REMARK 3 24 1.2338 - 1.2164 0.94 2545 116 0.2312 0.2617 REMARK 3 25 1.2164 - 1.2000 0.88 2383 118 0.2397 0.2676 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 7.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1895 REMARK 3 ANGLE : 1.183 2572 REMARK 3 CHIRALITY : 0.047 276 REMARK 3 PLANARITY : 0.005 333 REMARK 3 DIHEDRAL : 13.678 710 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5KM3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1000222214. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-SEP-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.9 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70340 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.200 REMARK 200 RESOLUTION RANGE LOW (A) : 63.671 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.04700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 89.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.35800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.0 REMARK 200 STARTING MODEL: 3TW2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, 38% PEG 8000,, PH 6.1, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 39.06650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.15250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 39.06650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.15250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4790 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 9460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 440 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 449 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 ASP A 3 REMARK 465 GLU A 4 REMARK 465 ILE A 5 REMARK 465 ALA A 6 REMARK 465 LYS A 7 REMARK 465 ALA A 8 REMARK 465 GLN A 9 REMARK 465 VAL A 10 REMARK 465 ALA A 11 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 ASP B 3 REMARK 465 GLU B 4 REMARK 465 ILE B 5 REMARK 465 ALA B 6 REMARK 465 LYS B 7 REMARK 465 ALA B 8 REMARK 465 GLN B 9 REMARK 465 VAL B 10 REMARK 465 ALA B 11 REMARK 465 ARG B 12 REMARK 465 PRO B 13 REMARK 465 GLY B 14 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 211 O HOH B 249 2.08 REMARK 500 O HOH B 217 O HOH B 302 2.10 REMARK 500 O HOH B 217 O HOH B 283 2.11 REMARK 500 O HOH B 225 O HOH B 283 2.14 REMARK 500 O HOH B 225 O HOH B 302 2.16 REMARK 500 O HOH A 301 O HOH A 425 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 322 O HOH A 367 4454 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 35 -157.89 -138.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 465 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A 466 DISTANCE = 6.34 ANGSTROMS REMARK 525 HOH A 467 DISTANCE = 6.57 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue U5P A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3TW2 RELATED DB: PDB REMARK 900 RELATED ID: 5IPB RELATED DB: PDB REMARK 900 RELATED ID: 5IPC RELATED DB: PDB REMARK 900 RELATED ID: 5IPD RELATED DB: PDB REMARK 900 RELATED ID: 5IPE RELATED DB: PDB REMARK 900 RELATED ID: 5KLY RELATED DB: PDB REMARK 900 RELATED ID: 5KLZ RELATED DB: PDB REMARK 900 RELATED ID: 5KM0 RELATED DB: PDB REMARK 900 RELATED ID: 5KM1 RELATED DB: PDB REMARK 900 RELATED ID: 5KM2 RELATED DB: PDB REMARK 900 RELATED ID: 5KM4 RELATED DB: PDB REMARK 900 RELATED ID: 5KM5 RELATED DB: PDB REMARK 900 RELATED ID: 5KM6 RELATED DB: PDB REMARK 900 RELATED ID: 5KM7 RELATED DB: PDB REMARK 900 RELATED ID: 5KM8 RELATED DB: PDB REMARK 900 RELATED ID: 5KM9 RELATED DB: PDB REMARK 900 RELATED ID: 5KMA RELATED DB: PDB REMARK 900 RELATED ID: 5KMB RELATED DB: PDB REMARK 900 RELATED ID: 5KMC RELATED DB: PDB DBREF 5KM3 A 1 126 UNP P49773 HINT1_HUMAN 1 126 DBREF 5KM3 B 1 126 UNP P49773 HINT1_HUMAN 1 126 SEQADV 5KM3 SER A -2 UNP P49773 EXPRESSION TAG SEQADV 5KM3 ASN A -1 UNP P49773 EXPRESSION TAG SEQADV 5KM3 ALA A 0 UNP P49773 EXPRESSION TAG SEQADV 5KM3 SER B -2 UNP P49773 EXPRESSION TAG SEQADV 5KM3 ASN B -1 UNP P49773 EXPRESSION TAG SEQADV 5KM3 ALA B 0 UNP P49773 EXPRESSION TAG SEQRES 1 A 129 SER ASN ALA MET ALA ASP GLU ILE ALA LYS ALA GLN VAL SEQRES 2 A 129 ALA ARG PRO GLY GLY ASP THR ILE PHE GLY LYS ILE ILE SEQRES 3 A 129 ARG LYS GLU ILE PRO ALA LYS ILE ILE PHE GLU ASP ASP SEQRES 4 A 129 ARG CYS LEU ALA PHE HIS ASP ILE SER PRO GLN ALA PRO SEQRES 5 A 129 THR HIS PHE LEU VAL ILE PRO LYS LYS HIS ILE SER GLN SEQRES 6 A 129 ILE SER VAL ALA GLU ASP ASP ASP GLU SER LEU LEU GLY SEQRES 7 A 129 HIS LEU MET ILE VAL GLY LYS LYS CYS ALA ALA ASP LEU SEQRES 8 A 129 GLY LEU ASN LYS GLY TYR ARG MET VAL VAL ASN GLU GLY SEQRES 9 A 129 SER ASP GLY GLY GLN SER VAL TYR HIS VAL HIS LEU HIS SEQRES 10 A 129 VAL LEU GLY GLY ARG GLN MET HIS TRP PRO PRO GLY SEQRES 1 B 129 SER ASN ALA MET ALA ASP GLU ILE ALA LYS ALA GLN VAL SEQRES 2 B 129 ALA ARG PRO GLY GLY ASP THR ILE PHE GLY LYS ILE ILE SEQRES 3 B 129 ARG LYS GLU ILE PRO ALA LYS ILE ILE PHE GLU ASP ASP SEQRES 4 B 129 ARG CYS LEU ALA PHE HIS ASP ILE SER PRO GLN ALA PRO SEQRES 5 B 129 THR HIS PHE LEU VAL ILE PRO LYS LYS HIS ILE SER GLN SEQRES 6 B 129 ILE SER VAL ALA GLU ASP ASP ASP GLU SER LEU LEU GLY SEQRES 7 B 129 HIS LEU MET ILE VAL GLY LYS LYS CYS ALA ALA ASP LEU SEQRES 8 B 129 GLY LEU ASN LYS GLY TYR ARG MET VAL VAL ASN GLU GLY SEQRES 9 B 129 SER ASP GLY GLY GLN SER VAL TYR HIS VAL HIS LEU HIS SEQRES 10 B 129 VAL LEU GLY GLY ARG GLN MET HIS TRP PRO PRO GLY HET U5P A 201 42 HET GOL A 202 6 HETNAM U5P URIDINE-5'-MONOPHOSPHATE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 U5P C9 H13 N2 O9 P FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *304(H2 O) HELIX 1 AA1 THR A 17 ARG A 24 1 8 HELIX 2 AA2 GLN A 62 ALA A 66 5 5 HELIX 3 AA3 GLU A 67 ASP A 69 5 3 HELIX 4 AA4 ASP A 70 LEU A 88 1 19 HELIX 5 AA5 GLY A 101 GLY A 105 1 5 HELIX 6 AA6 THR B 17 ARG B 24 1 8 HELIX 7 AA7 GLN B 62 ALA B 66 5 5 HELIX 8 AA8 GLU B 67 ASP B 69 5 3 HELIX 9 AA9 ASP B 70 LEU B 88 1 19 HELIX 10 AB1 GLY B 101 GLY B 105 1 5 SHEET 1 AA110 ILE A 31 GLU A 34 0 SHEET 2 AA110 CYS A 38 HIS A 42 -1 O ALA A 40 N ILE A 32 SHEET 3 AA110 THR A 50 PRO A 56 -1 O LEU A 53 N PHE A 41 SHEET 4 AA110 LEU A 113 GLY A 117 -1 O VAL A 115 N PHE A 52 SHEET 5 AA110 TYR A 94 GLU A 100 -1 N VAL A 97 O HIS A 114 SHEET 6 AA110 TYR B 94 GLU B 100 -1 O VAL B 98 N MET A 96 SHEET 7 AA110 LEU B 113 GLY B 117 -1 O HIS B 114 N VAL B 97 SHEET 8 AA110 THR B 50 PRO B 56 -1 N PHE B 52 O VAL B 115 SHEET 9 AA110 CYS B 38 HIS B 42 -1 N PHE B 41 O LEU B 53 SHEET 10 AA110 ILE B 31 GLU B 34 -1 N PHE B 33 O ALA B 40 CISPEP 1 TRP A 123 PRO A 124 0 1.36 CISPEP 2 TRP B 123 PRO B 124 0 5.89 SITE 1 AC1 19 ILE A 18 PHE A 19 ASP A 43 ILE A 44 SITE 2 AC1 19 SER A 45 LEU A 53 ASN A 99 GLY A 105 SITE 3 AC1 19 GLN A 106 SER A 107 VAL A 108 HIS A 112 SITE 4 AC1 19 HIS A 114 GOL A 202 HOH A 301 HOH A 310 SITE 5 AC1 19 HOH A 320 HOH A 344 HOH A 362 SITE 1 AC2 9 ALA A 29 LYS A 30 PHE A 41 HIS A 42 SITE 2 AC2 9 ILE A 44 U5P A 201 HOH A 313 HOH A 406 SITE 3 AC2 9 HOH A 408 CRYST1 78.133 46.305 63.862 90.00 94.44 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012799 0.000000 0.000993 0.00000 SCALE2 0.000000 0.021596 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015706 0.00000