HEADER TRANSPORT PROTEIN 30-JUN-16 5KOM TITLE THE CRYSTAL STRUCTURE OF FLUORIDE CHANNEL FLUC EC2 F83I MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE FLUORIDE ION TRANSPORTER CRCB; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: MONOBODY; COMPND 8 CHAIN: C, D; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 GENE: CRCB, AC789_145PL00540, AKG99_27195, AL505_410006, SOURCE 5 AN206_26275, AUQ25_20445, ECONIH1_26550, ECS286_0026, MJ49_27125, SOURCE 6 PCTXM15_EC8_00123, PO103_22, SK78_04822; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET21; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PHFT2 KEYWDS ALPHA HELIX, ION CHANNEL, MEMBRANE PROTEIN, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.B.LAST,L.KOLMAKOVA-PARTENSKY,T.SHANE,C.MILLER REVDAT 5 04-OCT-23 5KOM 1 LINK REVDAT 4 25-DEC-19 5KOM 1 REMARK REVDAT 3 27-SEP-17 5KOM 1 REMARK REVDAT 2 10-AUG-16 5KOM 1 JRNL REVDAT 1 03-AUG-16 5KOM 0 JRNL AUTH N.B.LAST,L.KOLMAKOVA-PARTENSKY,T.SHANE,C.MILLER JRNL TITL MECHANISTIC SIGNS OF DOUBLE-BARRELED STRUCTURE IN A FLUORIDE JRNL TITL 2 ION CHANNEL. JRNL REF ELIFE V. 5 2016 JRNL REFN ESSN 2050-084X JRNL PMID 27449280 JRNL DOI 10.7554/ELIFE.18767 REMARK 2 REMARK 2 RESOLUTION. 2.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0151 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 28695 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1455 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.69 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.76 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2097 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.77 REMARK 3 BIN R VALUE (WORKING SET) : 0.3310 REMARK 3 BIN FREE R VALUE SET COUNT : 119 REMARK 3 BIN FREE R VALUE : 0.3500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3354 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 102 REMARK 3 SOLVENT ATOMS : 9 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.49000 REMARK 3 B22 (A**2) : -2.49000 REMARK 3 B33 (A**2) : 4.97000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.287 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.218 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.193 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 21.365 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.914 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3544 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3445 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4855 ; 1.285 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7951 ; 0.932 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 437 ; 6.109 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 100 ;33.126 ;22.800 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 525 ;13.658 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 7.694 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 619 ; 0.072 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3747 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 751 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1760 ; 1.402 ; 4.389 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1759 ; 1.401 ; 4.389 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2193 ; 2.373 ; 6.580 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 2 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 2 124 B 2 124 36250 0.030 0.050 REMARK 3 2 C 1 96 D 1 96 26278 0.080 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 125 REMARK 3 ORIGIN FOR THE GROUP (A): 84.0844 43.3973 -19.3734 REMARK 3 T TENSOR REMARK 3 T11: 0.4187 T22: 0.0583 REMARK 3 T33: 0.3464 T12: -0.0216 REMARK 3 T13: -0.0937 T23: -0.0671 REMARK 3 L TENSOR REMARK 3 L11: 2.2017 L22: 8.7019 REMARK 3 L33: 2.2680 L12: -0.8506 REMARK 3 L13: -0.6733 L23: 2.0749 REMARK 3 S TENSOR REMARK 3 S11: 0.1789 S12: 0.2689 S13: -0.1958 REMARK 3 S21: -1.1605 S22: -0.2650 S23: 0.5632 REMARK 3 S31: -0.0523 S32: -0.2195 S33: 0.0861 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 125 REMARK 3 ORIGIN FOR THE GROUP (A): 95.0482 49.8553 -14.0091 REMARK 3 T TENSOR REMARK 3 T11: 0.2801 T22: 0.0110 REMARK 3 T33: 0.3796 T12: -0.0298 REMARK 3 T13: 0.0445 T23: -0.0324 REMARK 3 L TENSOR REMARK 3 L11: 1.9307 L22: 9.0359 REMARK 3 L33: 1.7197 L12: -0.1418 REMARK 3 L13: -0.5988 L23: -0.1739 REMARK 3 S TENSOR REMARK 3 S11: 0.1209 S12: -0.0193 S13: 0.2030 REMARK 3 S21: -0.5031 S22: -0.0657 S23: -0.8847 REMARK 3 S31: -0.0305 S32: 0.0387 S33: -0.0552 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 96 REMARK 3 ORIGIN FOR THE GROUP (A): 94.3277 9.9764 -13.5246 REMARK 3 T TENSOR REMARK 3 T11: 0.2716 T22: 0.0196 REMARK 3 T33: 0.3279 T12: -0.0111 REMARK 3 T13: -0.0229 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 1.9050 L22: 12.8405 REMARK 3 L33: 1.9857 L12: 0.1516 REMARK 3 L13: -0.6384 L23: -2.2624 REMARK 3 S TENSOR REMARK 3 S11: 0.0170 S12: 0.0258 S13: -0.1421 REMARK 3 S21: 0.2722 S22: -0.0845 S23: -0.2072 REMARK 3 S31: -0.1273 S32: 0.1640 S33: 0.0675 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 96 REMARK 3 ORIGIN FOR THE GROUP (A): 78.7801 79.0420 -2.4908 REMARK 3 T TENSOR REMARK 3 T11: 0.1251 T22: 0.0481 REMARK 3 T33: 0.3902 T12: -0.0133 REMARK 3 T13: 0.0480 T23: -0.0408 REMARK 3 L TENSOR REMARK 3 L11: 2.8187 L22: 8.2389 REMARK 3 L33: 6.3555 L12: -2.6971 REMARK 3 L13: -2.0175 L23: 5.4160 REMARK 3 S TENSOR REMARK 3 S11: 0.0818 S12: -0.1278 S13: 0.1638 REMARK 3 S21: -0.4575 S22: -0.0634 S23: 0.1922 REMARK 3 S31: -0.2591 S32: -0.2359 S33: -0.0184 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5KOM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1000221908. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-AUG-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9999 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30195 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.690 REMARK 200 RESOLUTION RANGE LOW (A) : 38.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.82 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 1.03700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5A43 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.28 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 36% PEG 600, 100 MM ADA, 10 MM HEPES, REMARK 280 100 MM NAF, 50 MM LINO3, PH 6.5, VAPOR DIFFUSION, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.27000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.13500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 108.40500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 126 REMARK 465 THR A 127 REMARK 465 ARG A 128 REMARK 465 GLY A 129 REMARK 465 LYS A 130 REMARK 465 ALA A 131 REMARK 465 ALA A 132 REMARK 465 SER A 133 REMARK 465 LEU A 134 REMARK 465 VAL A 135 REMARK 465 PRO A 136 REMARK 465 ARG A 137 REMARK 465 GLY A 138 REMARK 465 SER A 139 REMARK 465 GLY A 140 REMARK 465 GLY A 141 REMARK 465 HIS A 142 REMARK 465 HIS A 143 REMARK 465 HIS A 144 REMARK 465 HIS A 145 REMARK 465 HIS A 146 REMARK 465 HIS A 147 REMARK 465 ALA B 126 REMARK 465 THR B 127 REMARK 465 ARG B 128 REMARK 465 GLY B 129 REMARK 465 LYS B 130 REMARK 465 ALA B 131 REMARK 465 ALA B 132 REMARK 465 SER B 133 REMARK 465 LEU B 134 REMARK 465 VAL B 135 REMARK 465 PRO B 136 REMARK 465 ARG B 137 REMARK 465 GLY B 138 REMARK 465 SER B 139 REMARK 465 GLY B 140 REMARK 465 GLY B 141 REMARK 465 HIS B 142 REMARK 465 HIS B 143 REMARK 465 HIS B 144 REMARK 465 HIS B 145 REMARK 465 HIS B 146 REMARK 465 HIS B 147 REMARK 465 GLY C 0 REMARK 465 GLY D 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 33 80.47 -155.06 REMARK 500 THR A 70 -73.12 -88.36 REMARK 500 ASN A 95 72.33 -102.64 REMARK 500 LEU B 33 80.43 -155.18 REMARK 500 THR B 70 -73.18 -88.65 REMARK 500 ASN B 95 72.35 -102.86 REMARK 500 LEU C 83 -122.74 52.99 REMARK 500 SER D 44 137.81 -175.38 REMARK 500 LEU D 83 -122.94 53.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 201 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 75 O REMARK 620 2 SER A 78 O 96.6 REMARK 620 3 GLY B 75 O 135.9 103.9 REMARK 620 4 SER B 78 O 108.8 122.1 92.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMU A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMU B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue F B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMU C 101 DBREF 5KOM A 1 126 UNP Q6J5N4 Q6J5N4_ECOLX 1 126 DBREF 5KOM B 1 126 UNP Q6J5N4 Q6J5N4_ECOLX 1 126 DBREF 5KOM C 0 96 PDB 5KOM 5KOM 0 96 DBREF 5KOM D 0 96 PDB 5KOM 5KOM 0 96 SEQADV 5KOM LYS A 25 UNP Q6J5N4 ARG 25 ENGINEERED MUTATION SEQADV 5KOM ILE A 83 UNP Q6J5N4 PHE 83 ENGINEERED MUTATION SEQADV 5KOM THR A 127 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM ARG A 128 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM GLY A 129 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM LYS A 130 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM ALA A 131 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM ALA A 132 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM SER A 133 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM LEU A 134 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM VAL A 135 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM PRO A 136 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM ARG A 137 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM GLY A 138 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM SER A 139 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM GLY A 140 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM GLY A 141 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS A 142 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS A 143 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS A 144 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS A 145 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS A 146 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS A 147 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM LYS B 25 UNP Q6J5N4 ARG 25 ENGINEERED MUTATION SEQADV 5KOM ILE B 83 UNP Q6J5N4 PHE 83 ENGINEERED MUTATION SEQADV 5KOM THR B 127 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM ARG B 128 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM GLY B 129 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM LYS B 130 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM ALA B 131 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM ALA B 132 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM SER B 133 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM LEU B 134 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM VAL B 135 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM PRO B 136 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM ARG B 137 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM GLY B 138 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM SER B 139 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM GLY B 140 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM GLY B 141 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS B 142 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS B 143 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS B 144 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS B 145 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS B 146 UNP Q6J5N4 EXPRESSION TAG SEQADV 5KOM HIS B 147 UNP Q6J5N4 EXPRESSION TAG SEQRES 1 A 147 MET ILE LYS SER LEU PHE ALA VAL ILE ILE GLY GLY SER SEQRES 2 A 147 VAL GLY CYS THR LEU ARG TRP LEU LEU SER THR LYS PHE SEQRES 3 A 147 ASN SER LEU PHE PRO ASN LEU PRO PRO GLY THR LEU VAL SEQRES 4 A 147 VAL ASN LEU LEU ALA GLY LEU ILE ILE GLY THR ALA LEU SEQRES 5 A 147 ALA TYR PHE LEU ARG GLN PRO HIS LEU ASP PRO PHE TRP SEQRES 6 A 147 LYS LEU MET ILE THR THR GLY LEU CYS GLY GLY LEU SER SEQRES 7 A 147 THR PHE SER THR ILE SER VAL GLU VAL PHE ALA LEU LEU SEQRES 8 A 147 GLN ALA GLY ASN TYR ILE TRP ALA LEU THR SER VAL LEU SEQRES 9 A 147 VAL HIS VAL ILE GLY SER LEU ILE MET THR ALA LEU GLY SEQRES 10 A 147 PHE PHE ILE ILE THR ILE LEU PHE ALA THR ARG GLY LYS SEQRES 11 A 147 ALA ALA SER LEU VAL PRO ARG GLY SER GLY GLY HIS HIS SEQRES 12 A 147 HIS HIS HIS HIS SEQRES 1 B 147 MET ILE LYS SER LEU PHE ALA VAL ILE ILE GLY GLY SER SEQRES 2 B 147 VAL GLY CYS THR LEU ARG TRP LEU LEU SER THR LYS PHE SEQRES 3 B 147 ASN SER LEU PHE PRO ASN LEU PRO PRO GLY THR LEU VAL SEQRES 4 B 147 VAL ASN LEU LEU ALA GLY LEU ILE ILE GLY THR ALA LEU SEQRES 5 B 147 ALA TYR PHE LEU ARG GLN PRO HIS LEU ASP PRO PHE TRP SEQRES 6 B 147 LYS LEU MET ILE THR THR GLY LEU CYS GLY GLY LEU SER SEQRES 7 B 147 THR PHE SER THR ILE SER VAL GLU VAL PHE ALA LEU LEU SEQRES 8 B 147 GLN ALA GLY ASN TYR ILE TRP ALA LEU THR SER VAL LEU SEQRES 9 B 147 VAL HIS VAL ILE GLY SER LEU ILE MET THR ALA LEU GLY SEQRES 10 B 147 PHE PHE ILE ILE THR ILE LEU PHE ALA THR ARG GLY LYS SEQRES 11 B 147 ALA ALA SER LEU VAL PRO ARG GLY SER GLY GLY HIS HIS SEQRES 12 B 147 HIS HIS HIS HIS SEQRES 1 C 97 GLY SER VAL SER SER VAL PRO THR LYS LEU GLU VAL VAL SEQRES 2 C 97 ALA ALA THR PRO THR SER LEU LEU ILE SER TRP ASP ALA SEQRES 3 C 97 PRO ALA VAL THR VAL VAL HIS TYR VAL ILE THR TYR GLY SEQRES 4 C 97 GLU THR GLY GLY ASN SER PRO VAL GLN GLU PHE THR VAL SEQRES 5 C 97 PRO GLY SER LYS SER THR ALA THR ILE SER GLY LEU LYS SEQRES 6 C 97 PRO GLY VAL ASP TYR THR ILE THR VAL TYR THR MET TYR SEQRES 7 C 97 TYR SER TYR SER ASP LEU TYR SER TYR SER SER PRO ILE SEQRES 8 C 97 SER ILE ASN TYR ARG THR SEQRES 1 D 97 GLY SER VAL SER SER VAL PRO THR LYS LEU GLU VAL VAL SEQRES 2 D 97 ALA ALA THR PRO THR SER LEU LEU ILE SER TRP ASP ALA SEQRES 3 D 97 PRO ALA VAL THR VAL VAL HIS TYR VAL ILE THR TYR GLY SEQRES 4 D 97 GLU THR GLY GLY ASN SER PRO VAL GLN GLU PHE THR VAL SEQRES 5 D 97 PRO GLY SER LYS SER THR ALA THR ILE SER GLY LEU LYS SEQRES 6 D 97 PRO GLY VAL ASP TYR THR ILE THR VAL TYR THR MET TYR SEQRES 7 D 97 TYR SER TYR SER ASP LEU TYR SER TYR SER SER PRO ILE SEQRES 8 D 97 SER ILE ASN TYR ARG THR HET NA A 201 1 HET DMU A 202 33 HET F A 203 1 HET DMU B 201 33 HET F B 202 1 HET DMU C 101 33 HETNAM NA SODIUM ION HETNAM DMU DECYL-BETA-D-MALTOPYRANOSIDE HETNAM F FLUORIDE ION HETSYN DMU DECYLMALTOSIDE FORMUL 5 NA NA 1+ FORMUL 6 DMU 3(C22 H42 O11) FORMUL 7 F 2(F 1-) FORMUL 11 HOH *9(H2 O) HELIX 1 AA1 ILE A 2 ASN A 27 1 26 HELIX 2 AA2 SER A 28 PHE A 30 5 3 HELIX 3 AA3 PRO A 34 GLN A 58 1 25 HELIX 4 AA4 ASP A 62 THR A 70 1 9 HELIX 5 AA5 GLY A 72 SER A 78 1 7 HELIX 6 AA6 PHE A 80 ALA A 93 1 14 HELIX 7 AA7 ASN A 95 PHE A 125 1 31 HELIX 8 AA8 ILE B 2 ASN B 27 1 26 HELIX 9 AA9 SER B 28 PHE B 30 5 3 HELIX 10 AB1 PRO B 34 GLN B 58 1 25 HELIX 11 AB2 ASP B 62 THR B 70 1 9 HELIX 12 AB3 GLY B 72 SER B 78 1 7 HELIX 13 AB4 PHE B 80 ALA B 93 1 14 HELIX 14 AB5 ASN B 95 PHE B 125 1 31 SHEET 1 AA1 3 THR C 7 THR C 15 0 SHEET 2 AA1 3 SER C 18 ASP C 24 -1 O LEU C 20 N ALA C 13 SHEET 3 AA1 3 THR C 57 ILE C 60 -1 O ALA C 58 N ILE C 21 SHEET 1 AA2 4 GLN C 47 PRO C 52 0 SHEET 2 AA2 4 THR C 29 GLU C 39 -1 N ILE C 35 O PHE C 49 SHEET 3 AA2 4 ASP C 68 SER C 79 -1 O TYR C 74 N VAL C 34 SHEET 4 AA2 4 LEU C 83 TYR C 86 -1 O SER C 85 N TYR C 77 SHEET 1 AA3 4 GLN C 47 PRO C 52 0 SHEET 2 AA3 4 THR C 29 GLU C 39 -1 N ILE C 35 O PHE C 49 SHEET 3 AA3 4 ASP C 68 SER C 79 -1 O TYR C 74 N VAL C 34 SHEET 4 AA3 4 ILE C 90 ARG C 95 -1 O ILE C 92 N ILE C 71 SHEET 1 AA4 3 THR D 7 THR D 15 0 SHEET 2 AA4 3 SER D 18 ASP D 24 -1 O LEU D 20 N ALA D 13 SHEET 3 AA4 3 THR D 57 ILE D 60 -1 O ALA D 58 N ILE D 21 SHEET 1 AA5 4 GLN D 47 PRO D 52 0 SHEET 2 AA5 4 THR D 29 GLU D 39 -1 N ILE D 35 O PHE D 49 SHEET 3 AA5 4 ASP D 68 SER D 79 -1 O TYR D 74 N VAL D 34 SHEET 4 AA5 4 LEU D 83 TYR D 86 -1 O SER D 85 N TYR D 77 SHEET 1 AA6 4 GLN D 47 PRO D 52 0 SHEET 2 AA6 4 THR D 29 GLU D 39 -1 N ILE D 35 O PHE D 49 SHEET 3 AA6 4 ASP D 68 SER D 79 -1 O TYR D 74 N VAL D 34 SHEET 4 AA6 4 ILE D 90 ARG D 95 -1 O ILE D 92 N ILE D 71 LINK O GLY A 75 NA NA A 201 1555 1555 2.13 LINK O SER A 78 NA NA A 201 1555 1555 2.30 LINK NA NA A 201 O GLY B 75 1555 1555 2.26 LINK NA NA A 201 O SER B 78 1555 1555 2.30 SITE 1 AC1 6 GLY A 75 GLY A 76 SER A 78 GLY B 75 SITE 2 AC1 6 GLY B 76 SER B 78 SITE 1 AC2 5 LEU A 91 GLN A 92 GLY A 94 TYR A 96 SITE 2 AC2 5 LEU B 111 SITE 1 AC3 5 ASN A 41 GLY A 45 SER A 110 PHE B 80 SITE 2 AC3 5 SER B 81 SITE 1 AC4 5 PHE A 119 LEU B 91 GLN B 92 TYR B 96 SITE 2 AC4 5 DMU C 101 SITE 1 AC5 5 PHE A 80 SER A 81 ASN B 41 GLY B 45 SITE 2 AC5 5 SER B 110 SITE 1 AC6 2 DMU B 201 HIS C 32 CRYST1 87.500 87.500 144.540 90.00 90.00 90.00 P 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011429 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011429 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006919 0.00000