HEADER TRANSFERASE 05-JUL-16 5KQ8 TITLE PANK3-AMPPN COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: PANTOTHENATE KINASE 3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 12-370; COMPND 5 SYNONYM: HPANK3,PANTOTHENIC ACID KINASE 3; COMPND 6 EC: 2.7.1.33; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PANK3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS PANK, SUBSTRATE, COMPLEX, TRANSFERASE, PANTOTHENATE KINASE EXPDTA X-RAY DIFFRACTION AUTHOR S.W.WHITE,M.YUN REVDAT 4 04-OCT-23 5KQ8 1 JRNL REMARK LINK REVDAT 3 26-OCT-16 5KQ8 1 JRNL REVDAT 2 07-SEP-16 5KQ8 1 JRNL REVDAT 1 31-AUG-16 5KQ8 0 JRNL AUTH C.SUBRAMANIAN,M.K.YUN,J.YAO,L.K.SHARMA,R.E.LEE,S.W.WHITE, JRNL AUTH 2 S.JACKOWSKI,C.O.ROCK JRNL TITL ALLOSTERIC REGULATION OF MAMMALIAN PANTOTHENATE KINASE. JRNL REF J.BIOL.CHEM. V. 291 22302 2016 JRNL REFN ESSN 1083-351X JRNL PMID 27555321 JRNL DOI 10.1074/JBC.M116.748061 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 26133 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.219 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1313 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.6514 - 4.1625 0.99 2879 153 0.1712 0.2141 REMARK 3 2 4.1625 - 3.3043 1.00 2784 147 0.1719 0.1892 REMARK 3 3 3.3043 - 2.8867 1.00 2761 145 0.1869 0.2366 REMARK 3 4 2.8867 - 2.6228 1.00 2759 146 0.1856 0.2300 REMARK 3 5 2.6228 - 2.4349 1.00 2754 142 0.1854 0.2388 REMARK 3 6 2.4349 - 2.2913 1.00 2726 145 0.1899 0.2218 REMARK 3 7 2.2913 - 2.1766 1.00 2747 146 0.2007 0.2392 REMARK 3 8 2.1766 - 2.0818 1.00 2706 148 0.2110 0.2578 REMARK 3 9 2.0818 - 2.0017 0.99 2704 141 0.2225 0.2558 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.720 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2810 REMARK 3 ANGLE : 1.034 3810 REMARK 3 CHIRALITY : 0.043 423 REMARK 3 PLANARITY : 0.004 482 REMARK 3 DIHEDRAL : 12.031 991 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 11:369 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1540 -22.0061 -6.0423 REMARK 3 T TENSOR REMARK 3 T11: 0.2497 T22: 0.2654 REMARK 3 T33: 0.1940 T12: -0.0389 REMARK 3 T13: 0.0123 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 2.8387 L22: 1.9968 REMARK 3 L33: 2.2640 L12: 0.5207 REMARK 3 L13: 1.4196 L23: 0.0922 REMARK 3 S TENSOR REMARK 3 S11: 0.1639 S12: -0.4975 S13: -0.0418 REMARK 3 S21: 0.2316 S22: -0.1951 S23: -0.1583 REMARK 3 S31: 0.1248 S32: -0.1698 S33: 0.0098 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 401:401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.9761 -15.7454 -8.9591 REMARK 3 T TENSOR REMARK 3 T11: 0.3229 T22: 0.3703 REMARK 3 T33: 0.4239 T12: -0.0341 REMARK 3 T13: -0.0279 T23: -0.0344 REMARK 3 L TENSOR REMARK 3 L11: 3.4548 L22: 0.7198 REMARK 3 L33: 1.4937 L12: 0.2458 REMARK 3 L13: -0.9943 L23: -0.5706 REMARK 3 S TENSOR REMARK 3 S11: 0.0108 S12: -0.1407 S13: 0.1699 REMARK 3 S21: 0.0658 S22: 0.1134 S23: 0.0372 REMARK 3 S31: -0.0298 S32: -0.1495 S33: -0.0748 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5KQ8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1000222610. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26151 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 42.642 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.10500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.99200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5KPR REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, AMMONIUM ACETATE, CITRATE, REMARK 280 PH 5.6, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 22.83167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 45.66333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 45.66333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 22.83167 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28830 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -51.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -45.66333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 GLY A -6 REMARK 465 SER A -5 REMARK 465 SER A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 HIS A 1 REMARK 465 HIS A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 GLY A 5 REMARK 465 LEU A 6 REMARK 465 VAL A 7 REMARK 465 PRO A 8 REMARK 465 ARG A 9 REMARK 465 GLY A 10 REMARK 465 PHE A 104 REMARK 465 SER A 105 REMARK 465 THR A 106 REMARK 465 LEU A 107 REMARK 465 SER A 370 REMARK 465 ASP A 371 REMARK 465 ASP A 372 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ILE A 33 CG1 CG2 CD1 REMARK 470 GLU A 36 CG CD OE1 OE2 REMARK 470 GLN A 39 CG CD OE1 NE2 REMARK 470 GLU A 40 CG CD OE1 OE2 REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 ASP A 101 CG OD1 OD2 REMARK 470 LYS A 102 CG CD CE NZ REMARK 470 ASN A 103 CG OD1 ND2 REMARK 470 GLN A 108 CG CD OE1 NE2 REMARK 470 ASN A 130 CB CG OD1 ND2 REMARK 470 GLU A 170 CG CD OE1 OE2 REMARK 470 ARG A 171 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 202 CG CD CE NZ REMARK 470 ASP A 203 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 501 O HOH A 502 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 32 44.23 -107.87 REMARK 500 GLN A 39 94.01 -43.36 REMARK 500 ASN A 130 55.95 -95.15 REMARK 500 SER A 153 166.00 68.95 REMARK 500 THR A 209 -163.50 -168.31 REMARK 500 PHE A 272 15.32 55.83 REMARK 500 VAL A 326 35.36 36.95 REMARK 500 HIS A 353 33.15 -99.41 REMARK 500 ASN A 368 28.99 -79.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 40 GLU A 41 149.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 AN2 A 401 O2B REMARK 620 2 HOH A 502 O 86.6 REMARK 620 3 HOH A 511 O 90.9 176.2 REMARK 620 4 HOH A 525 O 96.4 96.7 86.4 REMARK 620 5 HOH A 527 O 88.7 97.2 79.9 165.4 REMARK 620 6 HOH A 528 O 169.4 102.1 80.0 88.7 84.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AN2 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5KPR RELATED DB: PDB REMARK 900 RELATED ID: 5KPT RELATED DB: PDB REMARK 900 RELATED ID: 5KPZ RELATED DB: PDB REMARK 900 RELATED ID: 5KQD RELATED DB: PDB DBREF 5KQ8 A 12 370 UNP Q9H999 PANK3_HUMAN 12 370 SEQADV 5KQ8 MET A -7 UNP Q9H999 INITIATING METHIONINE SEQADV 5KQ8 GLY A -6 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 SER A -5 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 SER A -4 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 HIS A -3 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 HIS A -2 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 HIS A -1 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 HIS A 0 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 HIS A 1 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 HIS A 2 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 SER A 3 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 SER A 4 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 GLY A 5 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 LEU A 6 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 VAL A 7 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 PRO A 8 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 ARG A 9 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 GLY A 10 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 SER A 11 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 ASP A 371 UNP Q9H999 EXPRESSION TAG SEQADV 5KQ8 ASP A 372 UNP Q9H999 EXPRESSION TAG SEQRES 1 A 380 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 380 LEU VAL PRO ARG GLY SER PRO TRP PHE GLY MET ASP ILE SEQRES 3 A 380 GLY GLY THR LEU VAL LYS LEU SER TYR PHE GLU PRO ILE SEQRES 4 A 380 ASP ILE THR ALA GLU GLU GLU GLN GLU GLU VAL GLU SER SEQRES 5 A 380 LEU LYS SER ILE ARG LYS TYR LEU THR SER ASN VAL ALA SEQRES 6 A 380 TYR GLY SER THR GLY ILE ARG ASP VAL HIS LEU GLU LEU SEQRES 7 A 380 LYS ASP LEU THR LEU PHE GLY ARG ARG GLY ASN LEU HIS SEQRES 8 A 380 PHE ILE ARG PHE PRO THR GLN ASP LEU PRO THR PHE ILE SEQRES 9 A 380 GLN MET GLY ARG ASP LYS ASN PHE SER THR LEU GLN THR SEQRES 10 A 380 VAL LEU CYS ALA THR GLY GLY GLY ALA TYR LYS PHE GLU SEQRES 11 A 380 LYS ASP PHE ARG THR ILE GLY ASN LEU HIS LEU HIS LYS SEQRES 12 A 380 LEU ASP GLU LEU ASP CYS LEU VAL LYS GLY LEU LEU TYR SEQRES 13 A 380 ILE ASP SER VAL SER PHE ASN GLY GLN ALA GLU CYS TYR SEQRES 14 A 380 TYR PHE ALA ASN ALA SER GLU PRO GLU ARG CYS GLN LYS SEQRES 15 A 380 MET PRO PHE ASN LEU ASP ASP PRO TYR PRO LEU LEU VAL SEQRES 16 A 380 VAL ASN ILE GLY SER GLY VAL SER ILE LEU ALA VAL HIS SEQRES 17 A 380 SER LYS ASP ASN TYR LYS ARG VAL THR GLY THR SER LEU SEQRES 18 A 380 GLY GLY GLY THR PHE LEU GLY LEU CYS SER LEU LEU THR SEQRES 19 A 380 GLY CYS GLU SER PHE GLU GLU ALA LEU GLU MET ALA SER SEQRES 20 A 380 LYS GLY ASP SER THR GLN ALA ASP LYS LEU VAL ARG ASP SEQRES 21 A 380 ILE TYR GLY GLY ASP TYR GLU ARG PHE GLY LEU PRO GLY SEQRES 22 A 380 TRP ALA VAL ALA SER SER PHE GLY ASN MET ILE TYR LYS SEQRES 23 A 380 GLU LYS ARG GLU SER VAL SER LYS GLU ASP LEU ALA ARG SEQRES 24 A 380 ALA THR LEU VAL THR ILE THR ASN ASN ILE GLY SER VAL SEQRES 25 A 380 ALA ARG MET CYS ALA VAL ASN GLU LYS ILE ASN ARG VAL SEQRES 26 A 380 VAL PHE VAL GLY ASN PHE LEU ARG VAL ASN THR LEU SER SEQRES 27 A 380 MET LYS LEU LEU ALA TYR ALA LEU ASP TYR TRP SER LYS SEQRES 28 A 380 GLY GLN LEU LYS ALA LEU PHE LEU GLU HIS GLU GLY TYR SEQRES 29 A 380 PHE GLY ALA VAL GLY ALA LEU LEU GLY LEU PRO ASN PHE SEQRES 30 A 380 SER ASP ASP HET AN2 A 401 27 HET MG A 402 1 HET EDO A 403 4 HETNAM AN2 AMP PHOSPHORAMIDATE HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 AN2 C10 H16 N6 O9 P2 FORMUL 3 MG MG 2+ FORMUL 4 EDO C2 H6 O2 FORMUL 5 HOH *54(H2 O) HELIX 1 AA1 THR A 34 GLN A 39 1 6 HELIX 2 AA2 VAL A 42 ASN A 55 1 14 HELIX 3 AA3 VAL A 66 GLU A 69 5 4 HELIX 4 AA4 ASP A 91 ARG A 100 1 10 HELIX 5 AA5 GLY A 115 PHE A 121 1 7 HELIX 6 AA6 PHE A 121 ARG A 126 1 6 HELIX 7 AA7 ASP A 137 SER A 153 1 17 HELIX 8 AA8 GLY A 214 GLY A 227 1 14 HELIX 9 AA9 SER A 230 LYS A 240 1 11 HELIX 10 AB1 GLY A 241 ALA A 246 5 6 HELIX 11 AB2 VAL A 250 GLY A 255 1 6 HELIX 12 AB3 PHE A 272 ILE A 276 5 5 HELIX 13 AB4 TYR A 277 GLU A 282 1 6 HELIX 14 AB5 SER A 285 LYS A 313 1 29 HELIX 15 AB6 GLY A 321 ARG A 325 5 5 HELIX 16 AB7 ASN A 327 SER A 342 1 16 HELIX 17 AB8 TYR A 356 GLY A 365 1 10 HELIX 18 AB9 LEU A 366 PHE A 369 5 4 SHEET 1 AA1 4 ALA A 57 TYR A 58 0 SHEET 2 AA1 4 GLY A 62 ARG A 64 -1 O GLY A 62 N TYR A 58 SHEET 3 AA1 4 ARG A 78 PRO A 88 -1 O ARG A 86 N ILE A 63 SHEET 4 AA1 4 LEU A 70 LEU A 75 -1 N LEU A 75 O ARG A 78 SHEET 1 AA2 7 ALA A 57 TYR A 58 0 SHEET 2 AA2 7 GLY A 62 ARG A 64 -1 O GLY A 62 N TYR A 58 SHEET 3 AA2 7 ARG A 78 PRO A 88 -1 O ARG A 86 N ILE A 63 SHEET 4 AA2 7 LEU A 22 PRO A 30 -1 N VAL A 23 O PHE A 87 SHEET 5 AA2 7 TRP A 13 ILE A 18 -1 N ASP A 17 O LYS A 24 SHEET 6 AA2 7 THR A 109 THR A 114 1 O THR A 114 N MET A 16 SHEET 7 AA2 7 LEU A 131 LYS A 135 1 O HIS A 132 N LEU A 111 SHEET 1 AA3 7 GLN A 173 PRO A 176 0 SHEET 2 AA3 7 CYS A 160 ALA A 164 -1 N TYR A 162 O MET A 175 SHEET 3 AA3 7 LYS A 347 LEU A 351 -1 O PHE A 350 N TYR A 161 SHEET 4 AA3 7 ARG A 316 VAL A 320 1 N VAL A 317 O LEU A 349 SHEET 5 AA3 7 LEU A 185 ILE A 190 1 N VAL A 188 O VAL A 318 SHEET 6 AA3 7 VAL A 194 SER A 201 -1 O VAL A 199 N LEU A 185 SHEET 7 AA3 7 ASN A 204 THR A 211 -1 O VAL A 208 N ILE A 196 SHEET 1 AA4 2 LYS A 248 LEU A 249 0 SHEET 2 AA4 2 VAL A 268 SER A 270 -1 O SER A 270 N LYS A 248 LINK O2B AN2 A 401 MG MG A 402 1555 1555 2.26 LINK MG MG A 402 O HOH A 502 1555 1555 2.14 LINK MG MG A 402 O HOH A 511 1555 1555 2.09 LINK MG MG A 402 O HOH A 525 1555 1555 2.16 LINK MG MG A 402 O HOH A 527 1555 1555 2.15 LINK MG MG A 402 O HOH A 528 1555 1555 2.09 CISPEP 1 TYR A 183 PRO A 184 0 -2.07 SITE 1 AC1 23 GLY A 19 GLY A 20 THR A 21 LEU A 22 SITE 2 AC1 23 LYS A 24 GLY A 191 SER A 192 GLY A 215 SITE 3 AC1 23 GLY A 216 PHE A 231 GLY A 321 ASN A 322 SITE 4 AC1 23 PHE A 323 ARG A 325 MG A 402 EDO A 403 SITE 5 AC1 23 HOH A 501 HOH A 502 HOH A 506 HOH A 514 SITE 6 AC1 23 HOH A 522 HOH A 525 HOH A 527 SITE 1 AC2 6 AN2 A 401 HOH A 502 HOH A 511 HOH A 525 SITE 2 AC2 6 HOH A 527 HOH A 528 SITE 1 AC3 5 LEU A 22 THR A 61 ARG A 86 AN2 A 401 SITE 2 AC3 5 HOH A 518 CRYST1 98.477 98.477 68.495 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010155 0.005863 0.000000 0.00000 SCALE2 0.000000 0.011726 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014600 0.00000