HEADER CARBOHYDRATE BINDING PROTEIN 07-JUL-16 5KRP TITLE FRUTAPIN, A LECTIN FROM ARTOCARPUS INCISA: CLONING, EXPRESSING AND TITLE 2 STRUCTURAL ANALYSIS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRUTAPIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARTOCARPUS ALTILIS; SOURCE 3 ORGANISM_TAXID: 194251; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS PROTEIN, LECTIN, APOFRUTAPIN, ARTOCARPUS ALTILLIS, CARBOHYDRATE KEYWDS 2 BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.D.DE SOUSA,A.R.COKER,Y.GUAN,J.GUO,A.C.DE OLIVEIRA MONTEIRO-MOREIRA, AUTHOR 2 R.DE AZEVEDO MOREIRA REVDAT 7 04-OCT-23 5KRP 1 REMARK REVDAT 6 08-JAN-20 5KRP 1 REMARK REVDAT 5 17-APR-19 5KRP 1 REMARK REVDAT 4 28-MAR-18 5KRP 1 JRNL REVDAT 3 22-NOV-17 5KRP 1 REMARK REVDAT 2 02-AUG-17 5KRP 1 JRNL REVDAT 1 19-JUL-17 5KRP 0 JRNL AUTH F.D.DE SOUSA,B.B.DA SILVA,G.P.FURTADO,I.S.CARNEIRO, JRNL AUTH 2 M.D.P.LOBO,Y.GUAN,J.GUO,A.R.COKER,M.R.LOURENZONI, JRNL AUTH 3 M.I.F.GUEDES,J.S.OWEN,D.J.ABRAHAM,A.C.O.MONTEIRO-MOREIRA, JRNL AUTH 4 R.A.MOREIRA JRNL TITL FRUTAPIN, A LECTIN FROMARTOCARPUS INCISA(BREADFRUIT): JRNL TITL 2 CLONING, EXPRESSION AND MOLECULAR INSIGHTS. JRNL REF BIOSCI. REP. V. 37 2017 JRNL REFN ISSN 1573-4935 JRNL PMID 28684550 JRNL DOI 10.1042/BSR20170969 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 81218 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 4087 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5901 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.69 REMARK 3 BIN R VALUE (WORKING SET) : 0.3170 REMARK 3 BIN FREE R VALUE SET COUNT : 292 REMARK 3 BIN FREE R VALUE : 0.3200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4605 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 78 REMARK 3 SOLVENT ATOMS : 611 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.58000 REMARK 3 B22 (A**2) : -1.57000 REMARK 3 B33 (A**2) : 2.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.079 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.245 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.974 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4885 ; 0.020 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 4551 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6620 ; 1.948 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10544 ; 1.194 ; 3.005 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 626 ; 7.007 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 200 ;35.788 ;23.800 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 763 ;12.351 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;16.015 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 726 ; 0.265 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5479 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1103 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2438 ; 2.054 ; 2.061 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2437 ; 2.053 ; 2.060 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3053 ; 2.951 ; 3.076 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3054 ; 2.952 ; 3.077 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2447 ; 3.368 ; 2.461 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2448 ; 3.367 ; 2.461 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3557 ; 4.948 ; 3.529 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5176 ; 6.673 ;25.515 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5177 ; 6.672 ;25.518 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5KRP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1000221299. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-FEB-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XDS, AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 85305 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 47.770 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.11800 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 8.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.11800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 8.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4AKD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.12 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: POTASSIUM PHOSPHATE MONOBASIC, PEG REMARK 280 8000, GLYCEROL, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.75000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.87000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.84000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.87000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.75000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.84000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 23890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -46.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS D 60 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER A 42 O HOH A 302 1.96 REMARK 500 O HOH D 423 O HOH D 433 2.07 REMARK 500 OD1 ASN A 122 O HOH A 303 2.08 REMARK 500 OE1 GLU A 74 O HOH A 304 2.10 REMARK 500 O HOH C 412 O HOH C 414 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 18 CD GLU B 18 OE2 -0.084 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 108 NE - CZ - NH1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ARG A 108 NE - CZ - NH2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG B 98 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG B 136 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 MET B 148 CG - SD - CE ANGL. DEV. = -10.1 DEGREES REMARK 500 ARG C 108 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG C 108 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG D 108 NE - CZ - NH1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG D 108 NE - CZ - NH2 ANGL. DEV. = -5.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 24 -159.54 -141.29 REMARK 500 LYS A 35 -93.20 -157.77 REMARK 500 TYR B 24 -156.63 -141.87 REMARK 500 LYS B 35 -97.30 -155.56 REMARK 500 SER B 89 40.82 -88.84 REMARK 500 ARG B 93 31.32 -82.24 REMARK 500 TYR C 24 -158.12 -142.57 REMARK 500 TYR C 24 -158.12 -140.26 REMARK 500 LYS C 35 -101.34 -150.19 REMARK 500 HIS C 57 77.47 -115.44 REMARK 500 TYR D 24 -154.76 -142.06 REMARK 500 TYR D 24 -154.76 -141.29 REMARK 500 LYS D 35 -94.79 -152.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL C 206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL D 202 DBREF 5KRP A 1 150 PDB 5KRP 5KRP 1 150 DBREF 5KRP B 1 150 PDB 5KRP 5KRP 1 150 DBREF 5KRP C 1 150 PDB 5KRP 5KRP 1 150 DBREF 5KRP D 1 150 PDB 5KRP 5KRP 1 150 SEQRES 1 A 150 MET ALA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY SEQRES 2 A 150 PRO GLY GLY ASN GLU TRP ASP ASP GLY SER TYR THR GLY SEQRES 3 A 150 ILE ARG ILE ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SEQRES 4 A 150 SER PHE SER VAL ILE TYR ASP LEU ASN GLY GLU PRO PHE SEQRES 5 A 150 SER GLY SER LYS HIS THR SER LYS LEU PRO TYR THR ASN SEQRES 6 A 150 VAL LYS ILE GLU LEU GLN PHE PRO GLU GLU PHE LEU VAL SEQRES 7 A 150 SER VAL SER GLY TYR THR ALA PRO PHE SER SER LEU ALA SEQRES 8 A 150 THR ARG THR PRO VAL VAL ARG SER LEU LYS PHE LYS THR SEQRES 9 A 150 ASN LYS GLY ARG THR PHE GLY PRO TYR GLY GLU GLU ASP SEQRES 10 A 150 GLY THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU VAL SEQRES 11 A 150 VAL GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA SEQRES 12 A 150 ILE GLY VAL HIS MET ALA LEU SEQRES 1 B 150 MET ALA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY SEQRES 2 B 150 PRO GLY GLY ASN GLU TRP ASP ASP GLY SER TYR THR GLY SEQRES 3 B 150 ILE ARG ILE ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SEQRES 4 B 150 SER PHE SER VAL ILE TYR ASP LEU ASN GLY GLU PRO PHE SEQRES 5 B 150 SER GLY SER LYS HIS THR SER LYS LEU PRO TYR THR ASN SEQRES 6 B 150 VAL LYS ILE GLU LEU GLN PHE PRO GLU GLU PHE LEU VAL SEQRES 7 B 150 SER VAL SER GLY TYR THR ALA PRO PHE SER SER LEU ALA SEQRES 8 B 150 THR ARG THR PRO VAL VAL ARG SER LEU LYS PHE LYS THR SEQRES 9 B 150 ASN LYS GLY ARG THR PHE GLY PRO TYR GLY GLU GLU ASP SEQRES 10 B 150 GLY THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU VAL SEQRES 11 B 150 VAL GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA SEQRES 12 B 150 ILE GLY VAL HIS MET ALA LEU SEQRES 1 C 150 MET ALA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY SEQRES 2 C 150 PRO GLY GLY ASN GLU TRP ASP ASP GLY SER TYR THR GLY SEQRES 3 C 150 ILE ARG ILE ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SEQRES 4 C 150 SER PHE SER VAL ILE TYR ASP LEU ASN GLY GLU PRO PHE SEQRES 5 C 150 SER GLY SER LYS HIS THR SER LYS LEU PRO TYR THR ASN SEQRES 6 C 150 VAL LYS ILE GLU LEU GLN PHE PRO GLU GLU PHE LEU VAL SEQRES 7 C 150 SER VAL SER GLY TYR THR ALA PRO PHE SER SER LEU ALA SEQRES 8 C 150 THR ARG THR PRO VAL VAL ARG SER LEU LYS PHE LYS THR SEQRES 9 C 150 ASN LYS GLY ARG THR PHE GLY PRO TYR GLY GLU GLU ASP SEQRES 10 C 150 GLY THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU VAL SEQRES 11 C 150 VAL GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA SEQRES 12 C 150 ILE GLY VAL HIS MET ALA LEU SEQRES 1 D 150 MET ALA SER GLN THR ILE THR VAL GLY PRO TRP GLY GLY SEQRES 2 D 150 PRO GLY GLY ASN GLU TRP ASP ASP GLY SER TYR THR GLY SEQRES 3 D 150 ILE ARG ILE ILE GLU LEU SER TYR LYS GLU ALA ILE GLY SEQRES 4 D 150 SER PHE SER VAL ILE TYR ASP LEU ASN GLY GLU PRO PHE SEQRES 5 D 150 SER GLY SER LYS HIS THR SER LYS LEU PRO TYR THR ASN SEQRES 6 D 150 VAL LYS ILE GLU LEU GLN PHE PRO GLU GLU PHE LEU VAL SEQRES 7 D 150 SER VAL SER GLY TYR THR ALA PRO PHE SER SER LEU ALA SEQRES 8 D 150 THR ARG THR PRO VAL VAL ARG SER LEU LYS PHE LYS THR SEQRES 9 D 150 ASN LYS GLY ARG THR PHE GLY PRO TYR GLY GLU GLU ASP SEQRES 10 D 150 GLY THR TYR PHE ASN LEU PRO ILE GLU ASN GLY LEU VAL SEQRES 11 D 150 VAL GLY PHE LYS GLY ARG THR GLY ASP LEU LEU ASP ALA SEQRES 12 D 150 ILE GLY VAL HIS MET ALA LEU HET GOL A 201 6 HET GOL A 202 6 HET GOL A 203 6 HET GOL B 201 6 HET GOL B 202 6 HET GOL C 201 6 HET GOL C 202 6 HET GOL C 203 6 HET GOL C 204 6 HET GOL C 205 6 HET GOL C 206 6 HET GOL D 201 6 HET GOL D 202 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 GOL 13(C3 H8 O3) FORMUL 18 HOH *611(H2 O) SHEET 1 AA1 8 ASN A 17 ASP A 20 0 SHEET 2 AA1 8 LEU A 129 THR A 137 -1 O GLY A 135 N TRP A 19 SHEET 3 AA1 8 LEU A 141 ALA A 149 -1 O GLY A 145 N LYS A 134 SHEET 4 AA1 8 ILE A 6 GLY A 12 -1 N ILE A 6 O MET A 148 SHEET 5 AA1 8 THR B 119 ASN B 127 -1 O PRO B 124 N GLY A 9 SHEET 6 AA1 8 LEU B 77 ALA B 85 -1 N VAL B 78 O ILE B 125 SHEET 7 AA1 8 VAL B 96 THR B 104 -1 O LYS B 103 N VAL B 78 SHEET 8 AA1 8 THR B 109 GLY B 114 -1 O PHE B 110 N PHE B 102 SHEET 1 AA2 4 GLU A 50 SER A 53 0 SHEET 2 AA2 4 ILE A 38 LEU A 47 -1 N LEU A 47 O GLU A 50 SHEET 3 AA2 4 GLY A 26 TYR A 34 -1 N GLU A 31 O SER A 42 SHEET 4 AA2 4 THR A 64 GLU A 69 -1 O ILE A 68 N ILE A 30 SHEET 1 AA3 8 THR A 109 GLY A 114 0 SHEET 2 AA3 8 PRO A 95 THR A 104 -1 N PHE A 102 O PHE A 110 SHEET 3 AA3 8 LEU A 77 PRO A 86 -1 N SER A 81 O LYS A 101 SHEET 4 AA3 8 THR A 119 ASN A 127 -1 O THR A 119 N THR A 84 SHEET 5 AA3 8 ILE B 6 GLY B 12 -1 O GLY B 9 N PRO A 124 SHEET 6 AA3 8 LEU B 141 ALA B 149 -1 O ILE B 144 N TRP B 11 SHEET 7 AA3 8 LEU B 129 THR B 137 -1 N GLY B 132 O HIS B 147 SHEET 8 AA3 8 ASN B 17 ASP B 20 -1 N TRP B 19 O GLY B 135 SHEET 1 AA4 4 GLU B 50 SER B 53 0 SHEET 2 AA4 4 ILE B 38 LEU B 47 -1 N TYR B 45 O PHE B 52 SHEET 3 AA4 4 GLY B 26 TYR B 34 -1 N GLU B 31 O SER B 42 SHEET 4 AA4 4 THR B 64 GLU B 69 -1 O ILE B 68 N ILE B 30 SHEET 1 AA5 8 ASN C 17 ASP C 20 0 SHEET 2 AA5 8 LEU C 129 THR C 137 -1 O GLY C 135 N TRP C 19 SHEET 3 AA5 8 LEU C 141 ALA C 149 -1 O ALA C 149 N LEU C 129 SHEET 4 AA5 8 ILE C 6 GLY C 12 -1 N ILE C 6 O MET C 148 SHEET 5 AA5 8 THR D 119 ASN D 127 -1 O PRO D 124 N GLY C 9 SHEET 6 AA5 8 LEU D 77 ALA D 85 -1 N VAL D 80 O LEU D 123 SHEET 7 AA5 8 VAL D 96 THR D 104 -1 O LYS D 103 N VAL D 78 SHEET 8 AA5 8 THR D 109 GLY D 114 -1 O PHE D 110 N PHE D 102 SHEET 1 AA6 4 GLU C 50 SER C 53 0 SHEET 2 AA6 4 ILE C 38 LEU C 47 -1 N LEU C 47 O GLU C 50 SHEET 3 AA6 4 GLY C 26 TYR C 34 -1 N GLU C 31 O SER C 42 SHEET 4 AA6 4 THR C 64 GLU C 69 -1 O VAL C 66 N LEU C 32 SHEET 1 AA7 8 THR C 109 GLY C 114 0 SHEET 2 AA7 8 VAL C 96 THR C 104 -1 N PHE C 102 O PHE C 110 SHEET 3 AA7 8 LEU C 77 ALA C 85 -1 N VAL C 78 O LYS C 103 SHEET 4 AA7 8 THR C 119 ASN C 127 -1 O ILE C 125 N VAL C 78 SHEET 5 AA7 8 ILE D 6 GLY D 12 -1 O GLY D 9 N PRO C 124 SHEET 6 AA7 8 LEU D 141 ALA D 149 -1 O MET D 148 N ILE D 6 SHEET 7 AA7 8 LEU D 129 THR D 137 -1 N LEU D 129 O ALA D 149 SHEET 8 AA7 8 ASN D 17 ASP D 20 -1 N ASN D 17 O THR D 137 SHEET 1 AA8 4 GLU D 50 SER D 53 0 SHEET 2 AA8 4 ILE D 38 LEU D 47 -1 N TYR D 45 O PHE D 52 SHEET 3 AA8 4 GLY D 26 TYR D 34 -1 N SER D 33 O GLY D 39 SHEET 4 AA8 4 THR D 64 GLU D 69 -1 O ILE D 68 N ILE D 30 CISPEP 1 GLY A 9 PRO A 10 0 4.61 CISPEP 2 PHE A 72 PRO A 73 0 4.46 CISPEP 3 GLY A 111 PRO A 112 0 0.82 CISPEP 4 GLY B 9 PRO B 10 0 -12.78 CISPEP 5 PHE B 72 PRO B 73 0 6.08 CISPEP 6 GLY B 111 PRO B 112 0 5.12 CISPEP 7 GLY C 9 PRO C 10 0 -0.57 CISPEP 8 PHE C 72 PRO C 73 0 5.37 CISPEP 9 GLY C 111 PRO C 112 0 11.85 CISPEP 10 GLY D 9 PRO D 10 0 -3.76 CISPEP 11 PHE D 72 PRO D 73 0 3.42 CISPEP 12 GLY D 111 PRO D 112 0 4.43 SITE 1 AC1 8 GLY A 118 THR A 119 TYR A 120 TYR B 83 SITE 2 AC1 8 GLY B 118 THR B 119 TYR B 120 HOH B 335 SITE 1 AC2 5 ASN A 17 LYS A 56 HIS A 57 HOH A 388 SITE 2 AC2 5 HOH A 405 SITE 1 AC3 9 GLY A 15 GLY A 16 THR A 94 GLY A 138 SITE 2 AC3 9 ASP A 139 LEU A 140 ASP A 142 HOH A 326 SITE 3 AC3 9 HOH A 336 SITE 1 AC4 4 ASN B 127 GLY B 128 LEU B 150 MET D 1 SITE 1 AC5 7 GLY B 15 GLY B 16 GLY B 138 ASP B 139 SITE 2 AC5 7 LEU B 140 ASP B 142 HOH B 311 SITE 1 AC6 6 MET A 1 ASN C 127 GLY C 128 LEU C 129 SITE 2 AC6 6 HOH C 377 HOH C 399 SITE 1 AC7 3 PHE C 52 SER C 53 HOH C 357 SITE 1 AC8 5 PHE C 87 SER C 88 ARG C 98 GLU C 115 SITE 2 AC8 5 ASP C 117 SITE 1 AC9 6 ASP B 20 LYS B 134 ALA C 91 THR C 92 SITE 2 AC9 6 HOH C 335 HOH C 379 SITE 1 AD1 9 THR C 109 GLY C 111 HOH C 305 HOH C 360 SITE 2 AD1 9 HOH C 367 SER D 88 SER D 89 ARG D 98 SITE 3 AD1 9 GLU D 115 SITE 1 AD2 9 GLU B 18 GLY C 16 THR C 94 GLY C 138 SITE 2 AD2 9 ASP C 139 LEU C 140 ASP C 142 HOH C 335 SITE 3 AD2 9 HOH C 389 SITE 1 AD3 8 GLY C 118 THR C 119 TYR C 120 GLY D 118 SITE 2 AD3 8 THR D 119 TYR D 120 HOH D 309 HOH D 337 SITE 1 AD4 7 GLY D 16 THR D 94 GLY D 138 ASP D 139 SITE 2 AD4 7 LEU D 140 ASP D 142 HOH D 341 CRYST1 67.500 93.680 97.740 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014815 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010675 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010231 0.00000