HEADER TRANSFERASE 12-JUL-16 5KTU TITLE CRYSTAL STRUCTURE OF THE BROMODOMAIN OF HUMAN CREBBP BOUND TO TITLE 2 PYRAZOLOPIPERIDINE SCAFFOLD COMPND MOL_ID: 1; COMPND 2 MOLECULE: CREB-BINDING PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: BROMODOMAIN (UNP RESIDUES 1082-1197); COMPND 5 EC: 2.3.1.48; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CREBBP, CBP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BROMODOMAIN, INHIBITOR, EPIGENETICS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR H.JAYARAM,F.POY,J.W.SETSER,S.F.BELLON REVDAT 3 04-OCT-23 5KTU 1 REMARK REVDAT 2 21-DEC-16 5KTU 1 JRNL REVDAT 1 02-NOV-16 5KTU 0 JRNL AUTH T.D.CRAWFORD,F.A.ROMERO,K.W.LAI,V.TSUI,A.M.TAYLOR, JRNL AUTH 2 G.DE LEON BOENIG,C.L.NOLAND,J.MURRAY,J.LY,E.F.CHOO, JRNL AUTH 3 T.L.HUNSAKER,E.W.CHAN,M.MERCHANT,S.KHARBANDA,K.E.GASCOIGNE, JRNL AUTH 4 S.KAUFMAN,M.H.BERESINI,J.LIAO,W.LIU,K.X.CHEN,Z.CHEN, JRNL AUTH 5 A.R.CONERY,A.COTE,H.JAYARAM,Y.JIANG,J.R.KIEFER,T.KLEINHEINZ, JRNL AUTH 6 Y.LI,J.MAHER,E.PARDO,F.POY,K.L.SPILLANE,F.WANG,J.WANG,X.WEI, JRNL AUTH 7 Z.XU,Z.XU,I.YEN,L.ZAWADZKE,X.ZHU,S.BELLON,R.CUMMINGS, JRNL AUTH 8 A.G.COCHRAN,B.K.ALBRECHT,S.MAGNUSON JRNL TITL DISCOVERY OF A POTENT AND SELECTIVE IN VIVO PROBE (GNE-272) JRNL TITL 2 FOR THE BROMODOMAINS OF CBP/EP300. JRNL REF J. MED. CHEM. V. 59 10549 2016 JRNL REFN ISSN 1520-4804 JRNL PMID 27682507 JRNL DOI 10.1021/ACS.JMEDCHEM.6B01022 REMARK 2 REMARK 2 RESOLUTION. 1.38 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.38 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 62.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 45351 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2422 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.38 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.42 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3301 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.62 REMARK 3 BIN R VALUE (WORKING SET) : 0.2870 REMARK 3 BIN FREE R VALUE SET COUNT : 190 REMARK 3 BIN FREE R VALUE : 0.2610 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1854 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 23 REMARK 3 SOLVENT ATOMS : 215 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35000 REMARK 3 B22 (A**2) : -0.35000 REMARK 3 B33 (A**2) : 1.13000 REMARK 3 B12 (A**2) : -0.17000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.064 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.064 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.283 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1956 ; 0.012 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1841 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2662 ; 1.421 ; 1.987 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4252 ; 0.737 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 224 ; 6.273 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 100 ;42.067 ;24.700 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 342 ;14.449 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;17.118 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 277 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2192 ; 0.020 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 451 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 893 ; 2.155 ; 1.616 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 892 ; 2.088 ; 1.613 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1118 ; 2.744 ; 2.412 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1095 A 1190 4 REMARK 3 1 B 1095 B 1190 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 1556 ; 0.570 ; 0.500 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1556 ; 3.990 ; 2.000 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1089 A 1195 REMARK 3 ORIGIN FOR THE GROUP (A): 47.7018 115.5587 -4.7012 REMARK 3 T TENSOR REMARK 3 T11: 0.1111 T22: 0.0233 REMARK 3 T33: 0.0197 T12: -0.0295 REMARK 3 T13: -0.0059 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 1.1908 L22: 3.2198 REMARK 3 L33: 1.7202 L12: -0.3107 REMARK 3 L13: 0.3684 L23: 1.3304 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: 0.1174 S13: -0.0209 REMARK 3 S21: -0.3459 S22: 0.1269 S23: -0.0810 REMARK 3 S31: -0.1210 S32: 0.1508 S33: -0.1004 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1084 B 1196 REMARK 3 ORIGIN FOR THE GROUP (A): 59.2527 138.7431 0.1540 REMARK 3 T TENSOR REMARK 3 T11: 0.0143 T22: 0.0256 REMARK 3 T33: 0.0471 T12: 0.0045 REMARK 3 T13: 0.0013 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 1.3289 L22: 1.0010 REMARK 3 L33: 0.8172 L12: -0.7745 REMARK 3 L13: 0.3370 L23: -0.6020 REMARK 3 S TENSOR REMARK 3 S11: 0.0338 S12: 0.0247 S13: 0.0914 REMARK 3 S21: -0.0259 S22: -0.0400 S23: -0.1194 REMARK 3 S31: 0.0132 S32: 0.0498 S33: 0.0061 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5KTU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1000222740. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47773 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.380 REMARK 200 RESOLUTION RANGE LOW (A) : 62.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 22.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3DWY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 0.1 M BIS REMARK 280 -TRIS PH 6.5, AND 25% POLYETHYLENE GLYCOL (PEG) 3350, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 62.61000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.14790 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 13.26300 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 62.61000 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 36.14790 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 13.26300 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 62.61000 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 36.14790 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 13.26300 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 72.29580 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 26.52600 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 72.29580 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 26.52600 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 72.29580 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 26.52600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1080 REMARK 465 SER A 1081 REMARK 465 LYS A 1082 REMARK 465 LYS A 1083 REMARK 465 ILE A 1084 REMARK 465 PHE A 1085 REMARK 465 LYS A 1086 REMARK 465 PRO A 1087 REMARK 465 GLU A 1088 REMARK 465 LEU A 1196 REMARK 465 GLY A 1197 REMARK 465 GLY B 1080 REMARK 465 SER B 1081 REMARK 465 LYS B 1082 REMARK 465 LYS B 1083 REMARK 465 GLY B 1197 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 1112 OG SER A 1136 1.93 REMARK 500 O HOH B 1368 O HOH B 1407 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B1173 NE - CZ - NH2 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 GLU B1149 0.07 SIDE CHAIN REMARK 500 ARG B1169 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 THR B1171 11.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6XB A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS B 1201 DBREF 5KTU A 1082 1197 UNP Q92793 CBP_HUMAN 1082 1197 DBREF 5KTU B 1082 1197 UNP Q92793 CBP_HUMAN 1082 1197 SEQADV 5KTU GLY A 1080 UNP Q92793 EXPRESSION TAG SEQADV 5KTU SER A 1081 UNP Q92793 EXPRESSION TAG SEQADV 5KTU GLY B 1080 UNP Q92793 EXPRESSION TAG SEQADV 5KTU SER B 1081 UNP Q92793 EXPRESSION TAG SEQRES 1 A 118 GLY SER LYS LYS ILE PHE LYS PRO GLU GLU LEU ARG GLN SEQRES 2 A 118 ALA LEU MET PRO THR LEU GLU ALA LEU TYR ARG GLN ASP SEQRES 3 A 118 PRO GLU SER LEU PRO PHE ARG GLN PRO VAL ASP PRO GLN SEQRES 4 A 118 LEU LEU GLY ILE PRO ASP TYR PHE ASP ILE VAL LYS ASN SEQRES 5 A 118 PRO MET ASP LEU SER THR ILE LYS ARG LYS LEU ASP THR SEQRES 6 A 118 GLY GLN TYR GLN GLU PRO TRP GLN TYR VAL ASP ASP VAL SEQRES 7 A 118 TRP LEU MET PHE ASN ASN ALA TRP LEU TYR ASN ARG LYS SEQRES 8 A 118 THR SER ARG VAL TYR LYS PHE CYS SER LYS LEU ALA GLU SEQRES 9 A 118 VAL PHE GLU GLN GLU ILE ASP PRO VAL MET GLN SER LEU SEQRES 10 A 118 GLY SEQRES 1 B 118 GLY SER LYS LYS ILE PHE LYS PRO GLU GLU LEU ARG GLN SEQRES 2 B 118 ALA LEU MET PRO THR LEU GLU ALA LEU TYR ARG GLN ASP SEQRES 3 B 118 PRO GLU SER LEU PRO PHE ARG GLN PRO VAL ASP PRO GLN SEQRES 4 B 118 LEU LEU GLY ILE PRO ASP TYR PHE ASP ILE VAL LYS ASN SEQRES 5 B 118 PRO MET ASP LEU SER THR ILE LYS ARG LYS LEU ASP THR SEQRES 6 B 118 GLY GLN TYR GLN GLU PRO TRP GLN TYR VAL ASP ASP VAL SEQRES 7 B 118 TRP LEU MET PHE ASN ASN ALA TRP LEU TYR ASN ARG LYS SEQRES 8 B 118 THR SER ARG VAL TYR LYS PHE CYS SER LYS LEU ALA GLU SEQRES 9 B 118 VAL PHE GLU GLN GLU ILE ASP PRO VAL MET GLN SER LEU SEQRES 10 B 118 GLY HET 6XB A1201 19 HET DMS B1201 4 HETNAM 6XB 1-(3-PHENYLAZANYL-1,4,6,7-TETRAHYDROPYRAZOLO[4,3- HETNAM 2 6XB C]PYRIDIN-5-YL)ETHANONE HETNAM DMS DIMETHYL SULFOXIDE FORMUL 3 6XB C14 H16 N4 O FORMUL 4 DMS C2 H6 O S FORMUL 5 HOH *215(H2 O) HELIX 1 AA1 LEU A 1090 ARG A 1103 1 14 HELIX 2 AA2 SER A 1108 ARG A 1112 5 5 HELIX 3 AA3 ASP A 1116 GLY A 1121 1 6 HELIX 4 AA4 ASP A 1124 VAL A 1129 1 6 HELIX 5 AA5 ASP A 1134 THR A 1144 1 11 HELIX 6 AA6 GLU A 1149 ASN A 1168 1 20 HELIX 7 AA7 SER A 1172 SER A 1195 1 24 HELIX 8 AA8 LYS B 1086 ARG B 1103 1 18 HELIX 9 AA9 SER B 1108 ARG B 1112 5 5 HELIX 10 AB1 ASP B 1116 GLY B 1121 1 6 HELIX 11 AB2 ASP B 1124 VAL B 1129 1 6 HELIX 12 AB3 ASP B 1134 THR B 1144 1 11 HELIX 13 AB4 GLU B 1149 ASN B 1168 1 20 HELIX 14 AB5 SER B 1172 LEU B 1196 1 25 CISPEP 1 ASP A 1105 PRO A 1106 0 16.54 CISPEP 2 ASP B 1105 PRO B 1106 0 17.65 SITE 1 AC1 7 PRO A1110 VAL A1115 ASN A1168 HOH A1307 SITE 2 AC1 7 HOH A1324 HOH A1326 ARG B1112 SITE 1 AC2 4 PRO B1110 VAL B1115 ASN B1168 HOH B1308 CRYST1 125.220 125.220 39.789 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007986 0.004611 0.000000 0.00000 SCALE2 0.000000 0.009221 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025133 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.142701 -0.561357 -0.815177 117.39434 1 MTRIX2 2 -0.709119 -0.632564 0.311469 244.67215 1 MTRIX3 2 -0.690497 0.533611 -0.488337 -38.84955 1