HEADER OXIDOREDUCTASE 24-MAY-16 5L40 TITLE POLYKETIDE KETOREDUCTASE SIMC7 - APO CRYSTAL FORM 1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYKETIDE KETOREDUCTASE SIMC7; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POLYKETIDE KETOREDUCTASE; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: A TWENTY RESIDUE NICKEL AFFINITY TAG WITH SEQUENCE COMPND 7 MGSSHHHHHHSSGLVPRGSH WAS APPENDED TO THE N-TERMINUS OF THE NATIVE COMPND 8 AMINO ACID SEQUENCE BEING DERIVED FROM THE PET-15B VECTOR CONSTRUCT COMPND 9 NAMED PET15B-NB-C7 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES ANTIBIOTICUS; SOURCE 3 ORGANISM_TAXID: 1890; SOURCE 4 GENE: SIMC7; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B-NB-C7 KEYWDS SHORT-CHAIN DEHYDROGENASE/REDUCTASE, KETOREDUCTASE, SIMOCYCLINONE, KEYWDS 2 DNA GYRASE INHIBITOR, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.SCHAFER,C.E.M.STEVENSON,B.WILKINSON,D.M.LAWSON,M.J.BUTTNER REVDAT 3 10-JAN-24 5L40 1 REMARK REVDAT 2 30-AUG-17 5L40 1 REMARK REVDAT 1 05-OCT-16 5L40 0 JRNL AUTH M.SCHAFER,C.E.STEVENSON,B.WILKINSON,D.M.LAWSON,M.J.BUTTNER JRNL TITL SUBSTRATE-ASSISTED CATALYSIS IN POLYKETIDE REDUCTION JRNL TITL 2 PROCEEDS VIA A PHENOLATE INTERMEDIATE. JRNL REF CELL CHEM BIOL V. 23 1091 2016 JRNL REFN ESSN 2451-9456 JRNL PMID 27617849 JRNL DOI 10.1016/J.CHEMBIOL.2016.07.018 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 53.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 38504 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2010 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2807 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.63 REMARK 3 BIN R VALUE (WORKING SET) : 0.2970 REMARK 3 BIN FREE R VALUE SET COUNT : 128 REMARK 3 BIN FREE R VALUE : 0.3030 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2067 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 167 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.81000 REMARK 3 B22 (A**2) : 0.81000 REMARK 3 B33 (A**2) : -1.62000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.086 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.087 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.068 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.002 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2162 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2092 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2961 ; 1.376 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4789 ; 0.950 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 291 ; 5.797 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 89 ;28.899 ;22.022 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 322 ;12.042 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;17.708 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 341 ; 0.082 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2510 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 474 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1146 ; 1.169 ; 1.655 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1145 ; 1.167 ; 1.655 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1440 ; 1.691 ; 2.480 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 38 REMARK 3 ORIGIN FOR THE GROUP (A): 35.9347 -0.8071 4.6453 REMARK 3 T TENSOR REMARK 3 T11: 0.0726 T22: 0.1229 REMARK 3 T33: 0.0449 T12: 0.0842 REMARK 3 T13: -0.0540 T23: -0.0553 REMARK 3 L TENSOR REMARK 3 L11: 7.2156 L22: 6.4131 REMARK 3 L33: 6.4755 L12: -1.5327 REMARK 3 L13: 0.2460 L23: 0.0882 REMARK 3 S TENSOR REMARK 3 S11: 0.2187 S12: 0.5159 S13: 0.0080 REMARK 3 S21: -0.3806 S22: -0.3242 S23: 0.3024 REMARK 3 S31: -0.1118 S32: -0.3794 S33: 0.1055 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 39 A 100 REMARK 3 ORIGIN FOR THE GROUP (A): 41.2335 8.8818 6.4307 REMARK 3 T TENSOR REMARK 3 T11: 0.2140 T22: 0.0929 REMARK 3 T33: 0.0713 T12: 0.0748 REMARK 3 T13: 0.0536 T23: 0.0350 REMARK 3 L TENSOR REMARK 3 L11: 3.4379 L22: 2.4827 REMARK 3 L33: 4.7653 L12: -0.6828 REMARK 3 L13: 0.6265 L23: 1.0423 REMARK 3 S TENSOR REMARK 3 S11: 0.3254 S12: 0.5355 S13: 0.2536 REMARK 3 S21: -0.5343 S22: -0.2176 S23: -0.1441 REMARK 3 S31: -0.5940 S32: 0.1143 S33: -0.1078 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 101 A 218 REMARK 3 ORIGIN FOR THE GROUP (A): 50.9404 -3.7409 19.7743 REMARK 3 T TENSOR REMARK 3 T11: 0.0145 T22: 0.0854 REMARK 3 T33: 0.0540 T12: -0.0074 REMARK 3 T13: -0.0038 T23: 0.0198 REMARK 3 L TENSOR REMARK 3 L11: 2.1389 L22: 3.4371 REMARK 3 L33: 2.4880 L12: -1.8382 REMARK 3 L13: -0.3989 L23: 0.3208 REMARK 3 S TENSOR REMARK 3 S11: 0.1066 S12: -0.0607 S13: 0.1944 REMARK 3 S21: 0.0122 S22: -0.0994 S23: -0.4253 REMARK 3 S31: 0.0098 S32: 0.4265 S33: -0.0072 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 219 A 280 REMARK 3 ORIGIN FOR THE GROUP (A): 54.1063 -7.3450 20.6482 REMARK 3 T TENSOR REMARK 3 T11: 0.0484 T22: 0.1041 REMARK 3 T33: 0.0343 T12: -0.0200 REMARK 3 T13: -0.0174 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 3.1501 L22: 2.7675 REMARK 3 L33: 2.8236 L12: -0.4105 REMARK 3 L13: -0.8850 L23: 0.6968 REMARK 3 S TENSOR REMARK 3 S11: 0.0452 S12: -0.0542 S13: 0.1089 REMARK 3 S21: 0.1108 S22: 0.0868 S23: -0.2889 REMARK 3 S31: -0.0816 S32: 0.5285 S33: -0.1320 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES WITH TLS ADDED REMARK 4 REMARK 4 5L40 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAY-16. REMARK 100 THE DEPOSITION ID IS D_1200000088. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9173 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.5.17 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40514 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 53.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 10.70 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : 1.81400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5L3Z REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 106.80500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 26.19000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 26.19000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 53.40250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 26.19000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 26.19000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 160.20750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 26.19000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 26.19000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 53.40250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 26.19000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 26.19000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 160.20750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 106.80500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 0 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 ALA A 281 REMARK 465 GLN A 282 REMARK 465 SER A 283 REMARK 465 ILE A 284 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 54 CG CD OE1 OE2 REMARK 470 ARG A 58 CD NE CZ NH1 NH2 REMARK 470 MET A 150 CG SD CE REMARK 470 GLN A 219 CG CD OE1 NE2 REMARK 470 ARG A 261 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 205 NH1 ARG A 267 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 264 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 ARG A 264 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 94 -141.26 -106.52 REMARK 500 GLU A 132 -143.17 -82.21 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 467 DISTANCE = 5.84 ANGSTROMS DBREF 5L40 A 1 284 UNP G9VYV4 G9VYV4_STRAT 1 284 SEQADV 5L40 MET A -19 UNP G9VYV4 INITIATING METHIONINE SEQADV 5L40 GLY A -18 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 SER A -17 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 SER A -16 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 HIS A -15 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 HIS A -14 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 HIS A -13 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 HIS A -12 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 HIS A -11 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 HIS A -10 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 SER A -9 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 SER A -8 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 GLY A -7 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 LEU A -6 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 VAL A -5 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 PRO A -4 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 ARG A -3 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 GLY A -2 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 SER A -1 UNP G9VYV4 EXPRESSION TAG SEQADV 5L40 HIS A 0 UNP G9VYV4 EXPRESSION TAG SEQRES 1 A 304 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 304 LEU VAL PRO ARG GLY SER HIS MET LYS ILE LEU VAL THR SEQRES 3 A 304 GLY ALA ARG GLY SER ILE GLY SER ARG VAL ALA GLY LYS SEQRES 4 A 304 LEU VAL GLU ARG GLY LEU PRO VAL ARG GLY GLY VAL ARG SEQRES 5 A 304 ASP LEU ALA ALA PRO GLY LEU PRO GLU GLY VAL GLU ALA SEQRES 6 A 304 VAL GLN ALA ASP LEU THR ARG PRO GLU THR LEU ALA ARG SEQRES 7 A 304 ALA LEU GLU GLY VAL ASP LYS VAL PHE LEU TYR THR VAL SEQRES 8 A 304 PRO GLU GLY ILE ALA GLY PHE VAL ASP GLU ALA ARG ALA SEQRES 9 A 304 ALA GLY VAL ARG HIS VAL VAL LEU LEU SER SER ILE ALA SEQRES 10 A 304 VAL THR TRP PRO ASP ALA ASP ARG ASP PRO ILE GLY ARG SEQRES 11 A 304 MET HIS LEU ALA VAL GLU ARG PRO ILE GLU GLU SER GLY SEQRES 12 A 304 LEU GLY TRP THR PHE VAL ARG PRO GLU ALA LEU ALA THR SEQRES 13 A 304 ASN ALA LEU GLY TRP ALA PRO GLU ILE ARG GLY GLY ASP SEQRES 14 A 304 MET VAL ARG CYS ALA TYR PRO GLY ALA TYR THR THR PRO SEQRES 15 A 304 VAL HIS GLU GLU ASP ILE ALA ASP VAL VAL VAL ALA ALA SEQRES 16 A 304 LEU THR THR PRO GLY HIS ARG SER ALA ALA TYR ALA LEU SEQRES 17 A 304 THR GLY PRO GLU THR LEU THR GLN ALA GLU GLN VAL ALA SEQRES 18 A 304 LEU ILE GLY GLU ALA LEU GLY ARG ALA VAL ARG CYS GLU SEQRES 19 A 304 ARG MET PRO GLU GLN GLU ALA ARG ALA VAL LEU GLU GLY SEQRES 20 A 304 LEU TYR PRO ALA GLU VAL VAL ASP ALA ILE LEU ALA GLY SEQRES 21 A 304 GLN ALA ALA ARG ASP GLY ARG PRO ALA GLU VAL LEU ASP SEQRES 22 A 304 THR ILE ARG ALA VAL THR GLY ARG PRO ALA ARG THR PHE SEQRES 23 A 304 ARG GLU TRP ALA GLY ASP HIS VAL ALA ALA PHE ARG PRO SEQRES 24 A 304 ALA ALA GLN SER ILE FORMUL 2 HOH *167(H2 O) HELIX 1 AA1 GLY A 10 ARG A 23 1 14 HELIX 2 AA2 ARG A 52 GLU A 54 5 3 HELIX 3 AA3 THR A 55 LEU A 60 1 6 HELIX 4 AA4 VAL A 71 GLU A 73 5 3 HELIX 5 AA5 GLY A 74 GLY A 86 1 13 HELIX 6 AA6 SER A 95 TRP A 100 5 6 HELIX 7 AA7 ASP A 106 SER A 122 1 17 HELIX 8 AA8 LEU A 134 GLY A 140 5 7 HELIX 9 AA9 TRP A 141 GLY A 148 1 8 HELIX 10 AB1 HIS A 164 THR A 178 1 15 HELIX 11 AB2 GLN A 196 GLY A 208 1 13 HELIX 12 AB3 PRO A 217 GLY A 227 1 11 HELIX 13 AB4 PRO A 230 ARG A 244 1 15 HELIX 14 AB5 ASP A 253 GLY A 260 1 8 HELIX 15 AB6 THR A 265 HIS A 273 1 9 HELIX 16 AB7 VAL A 274 ARG A 278 5 5 SHEET 1 AA1 7 GLU A 44 GLN A 47 0 SHEET 2 AA1 7 VAL A 27 VAL A 31 1 N GLY A 29 O GLU A 44 SHEET 3 AA1 7 LYS A 2 VAL A 5 1 N VAL A 5 O GLY A 30 SHEET 4 AA1 7 VAL A 63 TYR A 69 1 O PHE A 67 N LEU A 4 SHEET 5 AA1 7 HIS A 89 LEU A 93 1 O VAL A 91 N VAL A 66 SHEET 6 AA1 7 GLY A 125 PRO A 131 1 O VAL A 129 N LEU A 92 SHEET 7 AA1 7 ALA A 184 LEU A 188 1 O TYR A 186 N ARG A 130 SHEET 1 AA2 2 MET A 150 CYS A 153 0 SHEET 2 AA2 2 ARG A 212 ARG A 215 1 O GLU A 214 N VAL A 151 SHEET 1 AA3 2 TYR A 159 THR A 160 0 SHEET 2 AA3 2 LEU A 194 THR A 195 -1 O LEU A 194 N THR A 160 CRYST1 52.380 52.380 213.610 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019091 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019091 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004681 0.00000