HEADER OXIDOREDUCTASE 02-JUN-16 5L76 TITLE CRYSTAL STRUCTURE OF HUMAN AMINOADIPATE SEMIALDEHYDE SYNTHASE, TITLE 2 SACCHAROPINE DEHYDROGENASE DOMAIN (IN APO FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-AMINOADIPIC SEMIALDEHYDE SYNTHASE, MITOCHONDRIAL; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 455-926; COMPND 5 SYNONYM: LKR/SDH; COMPND 6 EC: 1.5.1.8,1.5.1.9; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: AASS; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFB-LIC-BSE KEYWDS AASS, AMINOADIPATE SEMIALDEHYDE SYNTHASE, SDH, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.KOPEC,I.A.PENA,E.REMBEZA,C.STRAIN-DAMERELL,R.CHALK,O.BORKOWSKA, AUTHOR 2 S.GOUBIN,S.VELUPILLAI,N.BURGESS-BROWN,C.ARROWSMITH,A.EDWARDS, AUTHOR 3 C.BOUNTRA,P.ARRUDA,W.W.YUE REVDAT 3 06-NOV-24 5L76 1 REMARK REVDAT 2 10-JAN-24 5L76 1 REMARK REVDAT 1 10-MAY-17 5L76 0 JRNL AUTH J.KOPEC,I.A.PENA,E.REMBEZA,C.STRAIN-DAMERELL,R.CHALK, JRNL AUTH 2 O.BORKOWSKA,S.GOUBIN,S.VELUPILLAI,N.BURGESS-BROWN, JRNL AUTH 3 C.ARROWSMITH,A.EDWARDS,C.BOUNTRA,P.ARRUDA,W.W.YUE JRNL TITL CRYSTAL STRUCTURE OF HUMAN AMINOADIPATE SEMIALDEHYDE JRNL TITL 2 SYNTHASE, SACCHAROPINE DEHYDROGENASE DOMAIN (IN APO FORM) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 63.47 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 78.3 REMARK 3 NUMBER OF REFLECTIONS : 15909 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.234 REMARK 3 R VALUE (WORKING SET) : 0.232 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.760 REMARK 3 FREE R VALUE TEST SET COUNT : 757 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 63.4892 - 4.3946 1.00 4085 200 0.1953 0.2512 REMARK 3 2 4.3946 - 3.4882 1.00 3878 184 0.2227 0.2832 REMARK 3 3 3.4882 - 3.0473 0.96 3684 195 0.2865 0.3421 REMARK 3 4 3.0473 - 2.7686 0.57 2141 110 0.3181 0.3528 REMARK 3 5 2.7686 - 2.5702 0.36 1364 68 0.3205 0.3432 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 67.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 3339 REMARK 3 ANGLE : 0.489 4526 REMARK 3 CHIRALITY : 0.041 531 REMARK 3 PLANARITY : 0.003 577 REMARK 3 DIHEDRAL : 10.987 1996 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5L76 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1200000241. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92819 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20374 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.570 REMARK 200 RESOLUTION RANGE LOW (A) : 75.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 23.10 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12000 REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 23.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2AXQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.92 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350 -- 10% ETHYLENE GLYCOL -- REMARK 280 0.2M SODIUM MALONATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 75.44500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 44.88000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 44.88000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 113.16750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 44.88000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 44.88000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 37.72250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 44.88000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 44.88000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 113.16750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 44.88000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 44.88000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 37.72250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 75.44500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1108 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 430 REMARK 465 GLY A 431 REMARK 465 HIS A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 465 HIS A 436 REMARK 465 HIS A 437 REMARK 465 SER A 438 REMARK 465 SER A 439 REMARK 465 GLY A 440 REMARK 465 VAL A 441 REMARK 465 ASP A 442 REMARK 465 LEU A 443 REMARK 465 GLY A 444 REMARK 465 THR A 445 REMARK 465 GLU A 446 REMARK 465 ASN A 447 REMARK 465 LEU A 448 REMARK 465 TYR A 449 REMARK 465 PHE A 450 REMARK 465 GLN A 451 REMARK 465 SER A 452 REMARK 465 MET A 453 REMARK 465 ALA A 454 REMARK 465 LEU A 455 REMARK 465 PRO A 456 REMARK 465 ASP A 457 REMARK 465 LYS A 458 REMARK 465 TYR A 459 REMARK 465 LYS A 460 REMARK 465 TYR A 461 REMARK 465 ILE A 462 REMARK 465 GLN A 463 REMARK 465 THR A 464 REMARK 465 LEU A 465 REMARK 465 ARG A 466 REMARK 465 GLU A 467 REMARK 465 SER A 468 REMARK 465 ARG A 469 REMARK 465 GLU A 470 REMARK 465 ARG A 471 REMARK 465 ALA A 472 REMARK 465 GLN A 473 REMARK 465 SER A 474 REMARK 465 LEU A 475 REMARK 465 SER A 476 REMARK 465 MET A 477 REMARK 465 GLY A 478 REMARK 465 THR A 479 REMARK 465 ARG A 480 REMARK 465 ALA A 750 REMARK 465 PHE A 751 REMARK 465 ARG A 752 REMARK 465 PRO A 753 REMARK 465 GLU A 754 REMARK 465 ALA A 755 REMARK 465 PRO A 926 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 482 CG CD CE NZ REMARK 470 GLU A 506 CG CD OE1 OE2 REMARK 470 LYS A 514 CG CD CE NZ REMARK 470 GLU A 518 CG CD OE1 OE2 REMARK 470 LYS A 522 CG CD CE NZ REMARK 470 ILE A 526 CG1 CG2 CD1 REMARK 470 GLU A 537 CG CD OE1 OE2 REMARK 470 GLU A 538 CG CD OE1 OE2 REMARK 470 LYS A 546 CG CD CE NZ REMARK 470 LYS A 564 CG CD CE NZ REMARK 470 LYS A 570 CG CD CE NZ REMARK 470 LYS A 584 CG CD CE NZ REMARK 470 LYS A 588 CG CD CE NZ REMARK 470 GLU A 591 CG CD OE1 OE2 REMARK 470 LYS A 672 CG CD CE NZ REMARK 470 LYS A 707 CG CD CE NZ REMARK 470 GLU A 710 CG CD OE1 OE2 REMARK 470 LYS A 780 CG CD CE NZ REMARK 470 GLU A 781 CG CD OE1 OE2 REMARK 470 LYS A 786 CE NZ REMARK 470 LEU A 787 CG CD1 CD2 REMARK 470 GLN A 810 CG CD OE1 NE2 REMARK 470 GLU A 812 CG CD OE1 OE2 REMARK 470 LYS A 893 CG CD CE NZ REMARK 470 LYS A 901 CG CD CE NZ REMARK 470 LYS A 912 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H GLU A 831 O HOH A 1109 1.58 REMARK 500 O HOH A 1109 O HOH A 1157 2.02 REMARK 500 O LYS A 925 O HOH A 1101 2.06 REMARK 500 OD1 ASP A 684 O HOH A 1102 2.07 REMARK 500 OE2 GLU A 493 O HOH A 1103 2.10 REMARK 500 O HOH A 1150 O HOH A 1156 2.14 REMARK 500 O ILE A 917 O1 EDO A 1005 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HG CYS A 534 HG CYS A 534 8667 1.08 REMARK 500 SG CYS A 534 HG CYS A 534 8667 1.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 501 -52.05 -124.85 REMARK 500 GLN A 536 42.57 -82.15 REMARK 500 ASP A 704 89.29 49.58 REMARK 500 LEU A 787 133.92 73.70 REMARK 500 MET A 896 174.59 47.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 1006 DBREF 5L76 A 455 926 UNP Q9UDR5 AASS_HUMAN 455 926 SEQADV 5L76 MET A 430 UNP Q9UDR5 INITIATING METHIONINE SEQADV 5L76 GLY A 431 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 HIS A 432 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 HIS A 433 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 HIS A 434 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 HIS A 435 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 HIS A 436 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 HIS A 437 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 SER A 438 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 SER A 439 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 GLY A 440 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 VAL A 441 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 ASP A 442 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 LEU A 443 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 GLY A 444 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 THR A 445 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 GLU A 446 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 ASN A 447 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 LEU A 448 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 TYR A 449 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 PHE A 450 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 GLN A 451 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 SER A 452 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 MET A 453 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 ALA A 454 UNP Q9UDR5 EXPRESSION TAG SEQADV 5L76 SER A 615 UNP Q9UDR5 THR 615 CONFLICT SEQRES 1 A 497 MET GLY HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP SEQRES 2 A 497 LEU GLY THR GLU ASN LEU TYR PHE GLN SER MET ALA LEU SEQRES 3 A 497 PRO ASP LYS TYR LYS TYR ILE GLN THR LEU ARG GLU SER SEQRES 4 A 497 ARG GLU ARG ALA GLN SER LEU SER MET GLY THR ARG ARG SEQRES 5 A 497 LYS VAL LEU VAL LEU GLY SER GLY TYR ILE SER GLU PRO SEQRES 6 A 497 VAL LEU GLU TYR LEU SER ARG ASP GLY ASN ILE GLU ILE SEQRES 7 A 497 THR VAL GLY SER ASP MET LYS ASN GLN ILE GLU GLN LEU SEQRES 8 A 497 GLY LYS LYS TYR ASN ILE ASN PRO VAL SER MET ASP ILE SEQRES 9 A 497 CYS LYS GLN GLU GLU LYS LEU GLY PHE LEU VAL ALA LYS SEQRES 10 A 497 GLN ASP LEU VAL ILE SER LEU LEU PRO TYR VAL LEU HIS SEQRES 11 A 497 PRO LEU VAL ALA LYS ALA CYS ILE THR ASN LYS VAL ASN SEQRES 12 A 497 MET VAL THR ALA SER TYR ILE THR PRO ALA LEU LYS GLU SEQRES 13 A 497 LEU GLU LYS SER VAL GLU ASP ALA GLY ILE THR ILE ILE SEQRES 14 A 497 GLY GLU LEU GLY LEU ASP PRO GLY LEU ASP HIS MET LEU SEQRES 15 A 497 ALA MET GLU SER ILE ASP LYS ALA LYS GLU VAL GLY ALA SEQRES 16 A 497 THR ILE GLU SER TYR ILE SER TYR CYS GLY GLY LEU PRO SEQRES 17 A 497 ALA PRO GLU HIS SER ASN ASN PRO LEU ARG TYR LYS PHE SEQRES 18 A 497 SER TRP SER PRO VAL GLY VAL LEU MET ASN VAL MET GLN SEQRES 19 A 497 SER ALA THR TYR LEU LEU ASP GLY LYS VAL VAL ASN VAL SEQRES 20 A 497 ALA GLY GLY ILE SER PHE LEU ASP ALA VAL THR SER MET SEQRES 21 A 497 ASP PHE PHE PRO GLY LEU ASN LEU GLU GLY TYR PRO ASN SEQRES 22 A 497 ARG ASP SER THR LYS TYR ALA GLU ILE TYR GLY ILE SER SEQRES 23 A 497 SER ALA HIS THR LEU LEU ARG GLY THR LEU ARG TYR LYS SEQRES 24 A 497 GLY TYR MET LYS ALA LEU ASN GLY PHE VAL LYS LEU GLY SEQRES 25 A 497 LEU ILE ASN ARG GLU ALA LEU PRO ALA PHE ARG PRO GLU SEQRES 26 A 497 ALA ASN PRO LEU THR TRP LYS GLN LEU LEU CYS ASP LEU SEQRES 27 A 497 VAL GLY ILE SER PRO SER SER GLU HIS ASP VAL LEU LYS SEQRES 28 A 497 GLU ALA VAL LEU LYS LYS LEU GLY GLY ASP ASN THR GLN SEQRES 29 A 497 LEU GLU ALA ALA GLU TRP LEU GLY LEU LEU GLY ASP GLU SEQRES 30 A 497 GLN VAL PRO GLN ALA GLU SER ILE LEU ASP ALA LEU SER SEQRES 31 A 497 LYS HIS LEU VAL MET LYS LEU SER TYR GLY PRO GLU GLU SEQRES 32 A 497 LYS ASP MET ILE VAL MET ARG ASP SER PHE GLY ILE ARG SEQRES 33 A 497 HIS PRO SER GLY HIS LEU GLU HIS LYS THR ILE ASP LEU SEQRES 34 A 497 VAL ALA TYR GLY ASP ILE ASN GLY PHE SER ALA MET ALA SEQRES 35 A 497 LYS THR VAL GLY LEU PRO THR ALA MET ALA ALA LYS MET SEQRES 36 A 497 LEU LEU ASP GLY GLU ILE GLY ALA LYS GLY LEU MET GLY SEQRES 37 A 497 PRO PHE SER LYS GLU ILE TYR GLY PRO ILE LEU GLU ARG SEQRES 38 A 497 ILE LYS ALA GLU GLY ILE ILE TYR THR THR GLN SER THR SEQRES 39 A 497 ILE LYS PRO HET EDO A1001 10 HET EDO A1002 10 HET EDO A1003 10 HET EDO A1004 10 HET EDO A1005 10 HET PEG A1006 17 HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 2 EDO 5(C2 H6 O2) FORMUL 7 PEG C4 H10 O3 FORMUL 8 HOH *62(H2 O) HELIX 1 AA1 ILE A 491 SER A 500 1 10 HELIX 2 AA2 MET A 513 TYR A 524 1 12 HELIX 3 AA3 GLN A 536 LYS A 546 1 11 HELIX 4 AA4 PRO A 555 VAL A 557 5 3 HELIX 5 AA5 LEU A 558 LYS A 570 1 13 HELIX 6 AA6 THR A 580 GLU A 585 1 6 HELIX 7 AA7 LEU A 586 ALA A 593 1 8 HELIX 8 AA8 GLY A 606 VAL A 622 1 17 HELIX 9 AA9 PRO A 639 SER A 642 5 4 HELIX 10 AB1 PRO A 654 VAL A 661 1 8 HELIX 11 AB2 GLY A 678 VAL A 686 5 9 HELIX 12 AB3 LYS A 707 GLY A 713 1 7 HELIX 13 AB4 GLY A 729 LEU A 740 1 12 HELIX 14 AB5 THR A 759 GLY A 769 1 11 HELIX 15 AB6 SER A 774 LYS A 786 1 13 HELIX 16 AB7 ASP A 790 LEU A 800 1 11 HELIX 17 AB8 SER A 813 LEU A 826 1 14 HELIX 18 AB9 SER A 868 ASP A 887 1 20 HELIX 19 AC1 SER A 900 ILE A 911 1 12 SHEET 1 AA1 6 ASN A 527 SER A 530 0 SHEET 2 AA1 6 GLU A 506 SER A 511 1 N VAL A 509 O ASN A 527 SHEET 3 AA1 6 LYS A 482 LEU A 486 1 N VAL A 485 O THR A 508 SHEET 4 AA1 6 LEU A 549 SER A 552 1 O ILE A 551 N LEU A 486 SHEET 5 AA1 6 ASN A 572 THR A 575 1 O VAL A 574 N SER A 552 SHEET 6 AA1 6 ILE A 597 ILE A 598 1 O ILE A 598 N THR A 575 SHEET 1 AA2 7 THR A 687 MET A 689 0 SHEET 2 AA2 7 LEU A 697 PRO A 701 -1 O GLY A 699 N THR A 687 SHEET 3 AA2 7 THR A 719 TYR A 727 -1 O ARG A 726 N GLU A 698 SHEET 4 AA2 7 THR A 625 PRO A 637 1 N SER A 631 O GLY A 723 SHEET 5 AA2 7 ASP A 834 ARG A 845 -1 O GLY A 843 N GLU A 627 SHEET 6 AA2 7 LEU A 851 TYR A 861 -1 O GLU A 852 N ILE A 844 SHEET 7 AA2 7 ILE A 917 LYS A 925 -1 O THR A 923 N HIS A 853 SHEET 1 AA3 2 ALA A 665 LEU A 669 0 SHEET 2 AA3 2 LYS A 672 VAL A 676 -1 O VAL A 674 N TYR A 667 SSBOND 1 CYS A 534 CYS A 534 1555 8667 2.03 CISPEP 1 GLY A 489 TYR A 490 0 1.57 CISPEP 2 ASP A 604 PRO A 605 0 2.56 SITE 1 AC1 4 GLU A 798 TRP A 799 GLY A 801 HOH A1111 SITE 1 AC2 2 THR A 920 SER A 922 SITE 1 AC3 2 GLU A 600 TYR A 708 SITE 1 AC4 6 VAL A 661 GLY A 679 PHE A 682 LEU A 683 SITE 2 AC4 6 MET A 731 ASN A 735 SITE 1 AC5 6 ASP A 857 VAL A 859 ILE A 917 TYR A 918 SITE 2 AC5 6 THR A 919 HOH A1132 SITE 1 AC6 6 TYR A 632 TYR A 667 ALA A 685 THR A 687 SITE 2 AC6 6 GLY A 699 HOH A1131 CRYST1 89.760 89.760 150.890 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011141 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011141 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006627 0.00000