HEADER HYDROLASE 15-JUN-16 5LAU TITLE OCEANOBACILLUS IHEYENSIS MACRODOMAIN MUTANT G37V WITH ADPR COMPND MOL_ID: 1; COMPND 2 MOLECULE: MACROD-TYPE MACRODOMAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES; COMPND 6 OTHER_DETAILS: THIS IS A MUTANT WHERE G37 IS MUTATED TO VALINE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: OCEANOBACILLUS IHEYENSIS (STRAIN DSM 14371 / SOURCE 3 CIP 107618 / JCM 11309 / KCTC 3954 / HTE831); SOURCE 4 ORGANISM_TAXID: 221109; SOURCE 5 GENE: OB2288; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA 2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET28A; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A-MACROD KEYWDS MACRODOMAIN, ADP-RIBOSYLATION, DEACETYLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.GIL-ORTIZ,R.ZAPATA-PEREZ,A.B.MARTINEZ,J.JUANHUIX,A.SANCHEZ-FERRER REVDAT 3 10-JAN-24 5LAU 1 HETSYN REVDAT 2 10-MAY-17 5LAU 1 JRNL REVDAT 1 03-MAY-17 5LAU 0 JRNL AUTH R.ZAPATA-PEREZ,F.GIL-ORTIZ,A.B.MARTINEZ-MONINO, JRNL AUTH 2 A.G.GARCIA-SAURA,J.JUANHUIX,A.SANCHEZ-FERRER JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF OCEANOBACILLUS JRNL TITL 2 IHEYENSIS MACRODOMAIN REVEALS A NETWORK OF WATERS INVOLVED JRNL TITL 3 IN SUBSTRATE BINDING AND CATALYSIS. JRNL REF OPEN BIOL V. 7 2017 JRNL REFN ESSN 2046-2441 JRNL PMID 28446708 JRNL DOI 10.1098/RSOB.160327 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0155 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 45534 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.156 REMARK 3 R VALUE (WORKING SET) : 0.154 REMARK 3 FREE R VALUE : 0.182 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2427 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.39 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3331 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.1580 REMARK 3 BIN FREE R VALUE SET COUNT : 182 REMARK 3 BIN FREE R VALUE : 0.2200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1403 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 48 REMARK 3 SOLVENT ATOMS : 172 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.049 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.048 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.028 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.476 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1518 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1436 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2079 ; 1.687 ; 1.996 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3311 ; 1.053 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 196 ; 6.392 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 63 ;37.089 ;26.349 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 245 ;10.972 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 3 ; 7.282 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 250 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1722 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 322 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 761 ; 1.459 ; 1.643 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 760 ; 1.457 ; 1.636 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 954 ; 1.930 ; 2.468 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 955 ; 1.929 ; 2.477 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 757 ; 2.018 ; 1.940 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 758 ; 2.017 ; 1.942 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1122 ; 2.449 ; 2.818 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 1708 ; 3.075 ;21.241 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1708 ; 3.074 ;21.241 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2954 ; 1.234 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 101 ;25.803 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2994 ;10.449 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5LAU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1200000442. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : CHANNEL CUT REMARK 200 OPTICS : KB MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47986 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 12.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07000 REMARK 200 FOR THE DATA SET : 22.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 0.40400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1SPV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 0.1 M MES PH REMARK 280 6.5 AND 30% (W/V) PEGMME 5K, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 54.82300 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 54.82300 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 54.82300 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 54.82300 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 54.82300 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 54.82300 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 54.82300 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 54.82300 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 54.82300 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 54.82300 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 54.82300 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 54.82300 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 54.82300 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 54.82300 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 54.82300 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 54.82300 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 54.82300 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 54.82300 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 54.82300 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 54.82300 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 54.82300 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 54.82300 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 54.82300 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 54.82300 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 54.82300 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 54.82300 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 54.82300 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 54.82300 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 54.82300 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 54.82300 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 54.82300 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 54.82300 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 54.82300 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 54.82300 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 54.82300 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 54.82300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 0.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 GLY A -21 REMARK 465 SER A -20 REMARK 465 SER A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 SER A -12 REMARK 465 SER A -11 REMARK 465 GLY A -10 REMARK 465 LEU A -9 REMARK 465 VAL A -8 REMARK 465 PRO A -7 REMARK 465 ARG A -6 REMARK 465 GLY A -5 REMARK 465 SER A -4 REMARK 465 HIS A -3 REMARK 465 MET A -2 REMARK 465 ILE A 185 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 GLU A 168 CG CD OE1 OE2 REMARK 470 ARG A 169 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 176 CG CD OE1 OE2 REMARK 470 LYS A 179 CG CD CE NZ REMARK 470 ILE A 182 CG1 CG2 CD1 REMARK 470 GLU A 183 CG CD OE1 OE2 REMARK 470 LYS A 184 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 19 O HOH A 301 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 6 -128.53 51.28 REMARK 500 VAL A 37 -168.42 -102.36 REMARK 500 ASN A 61 -71.10 -91.96 REMARK 500 PHE A 79 -119.07 52.87 REMARK 500 SER A 122 -42.74 79.21 REMARK 500 SER A 130 -3.35 76.19 REMARK 500 VAL A 158 -55.66 -122.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 466 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A 467 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A 468 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A 469 DISTANCE = 6.96 ANGSTROMS REMARK 525 HOH A 470 DISTANCE = 7.50 ANGSTROMS REMARK 525 HOH A 471 DISTANCE = 8.47 ANGSTROMS REMARK 525 HOH A 472 DISTANCE = 8.69 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AR6 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 203 DBREF 5LAU A 1 185 UNP Q8EP31 Q8EP31_OCEIH 1 185 SEQADV 5LAU MET A -22 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU GLY A -21 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU SER A -20 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU SER A -19 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU HIS A -18 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU HIS A -17 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU HIS A -16 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU HIS A -15 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU HIS A -14 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU HIS A -13 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU SER A -12 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU SER A -11 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU GLY A -10 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU LEU A -9 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU VAL A -8 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU PRO A -7 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU ARG A -6 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU GLY A -5 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU SER A -4 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU HIS A -3 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU MET A -2 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU ALA A -1 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU SER A 0 UNP Q8EP31 EXPRESSION TAG SEQADV 5LAU VAL A 37 UNP Q8EP31 GLY 37 ENGINEERED MUTATION SEQRES 1 A 208 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 208 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET LYS HIS SEQRES 3 A 208 ASN ILE ASN ASP ASN THR LEU GLU ILE VAL VAL GLY ASP SEQRES 4 A 208 ILE THR LYS GLU THR THR ASN VAL ILE VAL ASN ALA ALA SEQRES 5 A 208 ASN GLY SER LEU LEU GLY GLY VAL GLY VAL ASP GLY ALA SEQRES 6 A 208 ILE HIS HIS ALA ALA GLY PRO GLU LEU LEU LYS ALA CYS SEQRES 7 A 208 GLN GLU MET ARG ASN ASN GLU LEU ASN GLY GLU GLU LEU SEQRES 8 A 208 PRO THR GLY GLU VAL ILE ILE THR SER GLY PHE GLN LEU SEQRES 9 A 208 PRO SER ARG PHE ILE ILE HIS THR VAL GLY PRO ILE TRP SEQRES 10 A 208 ASN GLN THR PRO ASP LEU GLN GLU GLU LEU LEU ALA ASN SEQRES 11 A 208 CYS TYR ARG ASN ALA LEU GLU LEU VAL LYS VAL LYS LYS SEQRES 12 A 208 LEU SER SER ILE SER PHE PRO SER ILE SER THR GLY VAL SEQRES 13 A 208 TYR GLY TYR PRO ILE HIS GLU ALA ALA ALA ILE ALA LEU SEQRES 14 A 208 GLN THR ILE ILE GLN PHE LEU GLN GLU ASN ASP VAL GLY SEQRES 15 A 208 LEU VAL LYS VAL VAL LEU PHE SER GLU ARG ASP TYR SER SEQRES 16 A 208 ILE TYR GLN GLU LYS LEU LYS TYR LEU ILE GLU LYS ILE HET AR6 A 201 36 HET GOL A 202 6 HET GOL A 203 6 HETNAM AR6 [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY- HETNAM 2 AR6 OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5- HETNAM 3 AR6 TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN HETNAM 4 AR6 PHOSPHATE HETNAM GOL GLYCEROL HETSYN AR6 ADENOSINE-5-DIPHOSPHORIBOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 AR6 C15 H23 N5 O14 P2 FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 HOH *172(H2 O) HELIX 1 AA1 ASP A 16 GLU A 20 5 5 HELIX 2 AA2 VAL A 37 GLY A 48 1 12 HELIX 3 AA3 PRO A 49 GLU A 62 1 14 HELIX 4 AA4 LEU A 100 LYS A 120 1 21 HELIX 5 AA5 PRO A 137 ASN A 156 1 20 HELIX 6 AA6 SER A 167 LYS A 184 1 18 SHEET 1 AA1 7 SER A 0 ILE A 5 0 SHEET 2 AA1 7 ASN A 8 VAL A 14 -1 O LEU A 10 N HIS A 3 SHEET 3 AA1 7 LEU A 160 LEU A 165 1 O LEU A 165 N VAL A 13 SHEET 4 AA1 7 SER A 123 PHE A 126 1 N PHE A 126 O VAL A 164 SHEET 5 AA1 7 VAL A 24 ALA A 28 1 N VAL A 26 O SER A 125 SHEET 6 AA1 7 PHE A 85 THR A 89 1 O ILE A 87 N ASN A 27 SHEET 7 AA1 7 VAL A 73 SER A 77 -1 N THR A 76 O ILE A 86 SITE 1 AC1 28 ASP A 16 ILE A 17 ALA A 28 ASN A 30 SITE 2 AC1 28 GLY A 36 VAL A 37 GLY A 38 VAL A 39 SITE 3 AC1 28 ASP A 40 LYS A 120 SER A 128 SER A 130 SITE 4 AC1 28 THR A 131 GLY A 132 VAL A 133 TYR A 134 SITE 5 AC1 28 VAL A 164 PHE A 166 ASP A 170 HOH A 303 SITE 6 AC1 28 HOH A 305 HOH A 311 HOH A 320 HOH A 331 SITE 7 AC1 28 HOH A 358 HOH A 375 HOH A 412 HOH A 413 SITE 1 AC2 11 GLU A 20 THR A 21 THR A 22 GLU A 66 SITE 2 AC2 11 GLU A 67 PRO A 69 PRO A 82 SER A 83 SITE 3 AC2 11 ARG A 84 HOH A 397 HOH A 453 SITE 1 AC3 8 GLY A 31 SER A 32 ARG A 59 GLU A 67 SITE 2 AC3 8 HOH A 316 HOH A 342 HOH A 389 HOH A 408 CRYST1 109.646 109.646 109.646 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009120 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009120 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009120 0.00000