HEADER OXIDOREDUCTASE 17-JUN-16 5LBU TITLE STRUCTURE OF THE HUMAN QUINONE REDUCTASE 2 (NQO2) IN COMPLEX WITH TO TITLE 2 CL097 COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIBOSYLDIHYDRONICOTINAMIDE DEHYDROGENASE [QUINONE]; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: NRH DEHYDROGENASE [QUINONE] 2,NRH:QUINONE OXIDOREDUCTASE 2, COMPND 5 QUINONE REDUCTASE 2,QR2; COMPND 6 EC: 1.10.5.1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: NQO2, NMOR2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS QUINONE REDUCTASE 2 RIBOSYLDIHYDRONICOTINAMIDE DEHYDROGENASE, KEYWDS 2 OXYDOREDUCTASE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.SCHNEIDER,O.GROSS REVDAT 4 10-JAN-24 5LBU 1 REMARK REVDAT 3 06-SEP-17 5LBU 1 REMARK REVDAT 2 14-DEC-16 5LBU 1 JRNL REVDAT 1 27-JUL-16 5LBU 0 JRNL AUTH C.GROSS,R.MISHRA,K.SCHNEIDER,G.MEDARD,J.WETTMARSHAUSEN, JRNL AUTH 2 D.DITTLEIN,O.GORKA,P.-A.KOENIG,S.FROMM,G.MAGNANI,T.CIKOVIC, JRNL AUTH 3 L.HARTJES,J.SMOLLICH,A.ROBERTSON,M.COOPER, JRNL AUTH 4 M.SCHMIDT-SUPPRIAN,M.SCHUSTER,K.SCHRODER,P.BROZ, JRNL AUTH 5 C.TRAIDL-HOFFMANN,B.KUESTER,J.RULAND,S.SCHNEIDER,F.PEROCCHI, JRNL AUTH 6 O.GROSS JRNL TITL IMIQUIMOD INHIBITS MITOCHONDRIAL COMPLEX I AND INDUCES K+ JRNL TITL 2 EFFLUX-INDEPENDENT NLRP3 INFLAMMASOME ACTIVATION VIA NEK7 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 56454 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.180 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2967 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.69 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3795 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.3970 REMARK 3 BIN FREE R VALUE SET COUNT : 189 REMARK 3 BIN FREE R VALUE : 0.3540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3612 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 205 REMARK 3 SOLVENT ATOMS : 261 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.61 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.45000 REMARK 3 B22 (A**2) : -0.41000 REMARK 3 B33 (A**2) : -2.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.098 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.095 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.090 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.980 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.971 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4000 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3660 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5466 ; 1.412 ; 2.009 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8433 ; 0.890 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 470 ; 6.130 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 171 ;34.043 ;24.035 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 627 ;11.039 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;13.255 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 573 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4402 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 938 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1841 ; 1.314 ; 2.510 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1840 ; 1.300 ; 2.508 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2303 ; 2.139 ; 3.755 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2304 ; 2.140 ; 3.756 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2159 ; 1.613 ; 2.746 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2160 ; 1.612 ; 2.746 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3157 ; 2.647 ; 4.039 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5246 ; 4.734 ;22.423 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5247 ; 4.734 ;22.429 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5LBU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JUN-16. REMARK 100 THE DEPOSITION ID IS D_1200000437. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-APR-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59424 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 44.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.06900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.71 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.80000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 2BZS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS HCL PH 8.5 2 M AMMONIUM REMARK 280 SULPHATE, VAPOR DIFFUSION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.84700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.00800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.42650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 53.00800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.84700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.42650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8260 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18010 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -90.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 ALA A 1 REMARK 465 GLN A 230 REMARK 465 HIS A 231 REMARK 465 HIS A 232 REMARK 465 HIS A 233 REMARK 465 HIS A 234 REMARK 465 HIS A 235 REMARK 465 HIS A 236 REMARK 465 MET B 0 REMARK 465 ALA B 1 REMARK 465 GLN B 230 REMARK 465 HIS B 231 REMARK 465 HIS B 232 REMARK 465 HIS B 233 REMARK 465 HIS B 234 REMARK 465 HIS B 235 REMARK 465 HIS B 236 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 132 -127.78 47.65 REMARK 500 TYR A 155 51.35 -99.71 REMARK 500 TYR B 132 -119.19 49.88 REMARK 500 TYR B 155 49.58 -93.57 REMARK 500 THR B 175 -66.95 -109.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 173 ND1 REMARK 620 2 HIS A 177 ND1 103.8 REMARK 620 3 CYS A 222 O 105.6 99.5 REMARK 620 4 CYS A 222 SG 125.0 120.1 98.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 302 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 173 ND1 REMARK 620 2 HIS B 177 ND1 104.1 REMARK 620 3 CYS B 222 O 104.8 94.1 REMARK 620 4 CYS B 222 SG 125.3 122.5 99.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C09 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C09 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C09 B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue C09 B 307 DBREF 5LBU A 0 230 UNP P16083 NQO2_HUMAN 1 231 DBREF 5LBU B 0 230 UNP P16083 NQO2_HUMAN 1 231 SEQADV 5LBU HIS A 231 UNP P16083 EXPRESSION TAG SEQADV 5LBU HIS A 232 UNP P16083 EXPRESSION TAG SEQADV 5LBU HIS A 233 UNP P16083 EXPRESSION TAG SEQADV 5LBU HIS A 234 UNP P16083 EXPRESSION TAG SEQADV 5LBU HIS A 235 UNP P16083 EXPRESSION TAG SEQADV 5LBU HIS A 236 UNP P16083 EXPRESSION TAG SEQADV 5LBU HIS B 231 UNP P16083 EXPRESSION TAG SEQADV 5LBU HIS B 232 UNP P16083 EXPRESSION TAG SEQADV 5LBU HIS B 233 UNP P16083 EXPRESSION TAG SEQADV 5LBU HIS B 234 UNP P16083 EXPRESSION TAG SEQADV 5LBU HIS B 235 UNP P16083 EXPRESSION TAG SEQADV 5LBU HIS B 236 UNP P16083 EXPRESSION TAG SEQRES 1 A 237 MET ALA GLY LYS LYS VAL LEU ILE VAL TYR ALA HIS GLN SEQRES 2 A 237 GLU PRO LYS SER PHE ASN GLY SER LEU LYS ASN VAL ALA SEQRES 3 A 237 VAL ASP GLU LEU SER ARG GLN GLY CYS THR VAL THR VAL SEQRES 4 A 237 SER ASP LEU TYR ALA MET ASN LEU GLU PRO ARG ALA THR SEQRES 5 A 237 ASP LYS ASP ILE THR GLY THR LEU SER ASN PRO GLU VAL SEQRES 6 A 237 PHE ASN TYR GLY VAL GLU THR HIS GLU ALA TYR LYS GLN SEQRES 7 A 237 ARG SER LEU ALA SER ASP ILE THR ASP GLU GLN LYS LYS SEQRES 8 A 237 VAL ARG GLU ALA ASP LEU VAL ILE PHE GLN PHE PRO LEU SEQRES 9 A 237 TYR TRP PHE SER VAL PRO ALA ILE LEU LYS GLY TRP MET SEQRES 10 A 237 ASP ARG VAL LEU CYS GLN GLY PHE ALA PHE ASP ILE PRO SEQRES 11 A 237 GLY PHE TYR ASP SER GLY LEU LEU GLN GLY LYS LEU ALA SEQRES 12 A 237 LEU LEU SER VAL THR THR GLY GLY THR ALA GLU MET TYR SEQRES 13 A 237 THR LYS THR GLY VAL ASN GLY ASP SER ARG TYR PHE LEU SEQRES 14 A 237 TRP PRO LEU GLN HIS GLY THR LEU HIS PHE CYS GLY PHE SEQRES 15 A 237 LYS VAL LEU ALA PRO GLN ILE SER PHE ALA PRO GLU ILE SEQRES 16 A 237 ALA SER GLU GLU GLU ARG LYS GLY MET VAL ALA ALA TRP SEQRES 17 A 237 SER GLN ARG LEU GLN THR ILE TRP LYS GLU GLU PRO ILE SEQRES 18 A 237 PRO CYS THR ALA HIS TRP HIS PHE GLY GLN HIS HIS HIS SEQRES 19 A 237 HIS HIS HIS SEQRES 1 B 237 MET ALA GLY LYS LYS VAL LEU ILE VAL TYR ALA HIS GLN SEQRES 2 B 237 GLU PRO LYS SER PHE ASN GLY SER LEU LYS ASN VAL ALA SEQRES 3 B 237 VAL ASP GLU LEU SER ARG GLN GLY CYS THR VAL THR VAL SEQRES 4 B 237 SER ASP LEU TYR ALA MET ASN LEU GLU PRO ARG ALA THR SEQRES 5 B 237 ASP LYS ASP ILE THR GLY THR LEU SER ASN PRO GLU VAL SEQRES 6 B 237 PHE ASN TYR GLY VAL GLU THR HIS GLU ALA TYR LYS GLN SEQRES 7 B 237 ARG SER LEU ALA SER ASP ILE THR ASP GLU GLN LYS LYS SEQRES 8 B 237 VAL ARG GLU ALA ASP LEU VAL ILE PHE GLN PHE PRO LEU SEQRES 9 B 237 TYR TRP PHE SER VAL PRO ALA ILE LEU LYS GLY TRP MET SEQRES 10 B 237 ASP ARG VAL LEU CYS GLN GLY PHE ALA PHE ASP ILE PRO SEQRES 11 B 237 GLY PHE TYR ASP SER GLY LEU LEU GLN GLY LYS LEU ALA SEQRES 12 B 237 LEU LEU SER VAL THR THR GLY GLY THR ALA GLU MET TYR SEQRES 13 B 237 THR LYS THR GLY VAL ASN GLY ASP SER ARG TYR PHE LEU SEQRES 14 B 237 TRP PRO LEU GLN HIS GLY THR LEU HIS PHE CYS GLY PHE SEQRES 15 B 237 LYS VAL LEU ALA PRO GLN ILE SER PHE ALA PRO GLU ILE SEQRES 16 B 237 ALA SER GLU GLU GLU ARG LYS GLY MET VAL ALA ALA TRP SEQRES 17 B 237 SER GLN ARG LEU GLN THR ILE TRP LYS GLU GLU PRO ILE SEQRES 18 B 237 PRO CYS THR ALA HIS TRP HIS PHE GLY GLN HIS HIS HIS SEQRES 19 B 237 HIS HIS HIS HET ZN A 301 1 HET FAD A 302 53 HET SO4 A 303 5 HET SO4 A 304 5 HET C09 A 305 18 HET C09 A 306 36 HET FAD B 301 53 HET ZN B 302 1 HET SO4 B 303 5 HET SO4 B 304 5 HET SO4 B 305 5 HET C09 B 306 18 HET C09 B 307 18 HETNAM ZN ZINC ION HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM SO4 SULFATE ION HETNAM C09 2-(ETHOXYMETHYL)-1H-IMIDAZO[4,5-C]QUINOLIN-4-AMINE HETSYN C09 CL097 FORMUL 3 ZN 2(ZN 2+) FORMUL 4 FAD 2(C27 H33 N9 O15 P2) FORMUL 5 SO4 5(O4 S 2-) FORMUL 7 C09 4(C13 H14 N4 O) FORMUL 16 HOH *261(H2 O) HELIX 1 AA1 SER A 16 GLY A 33 1 18 HELIX 2 AA2 THR A 51 ILE A 55 5 5 HELIX 3 AA3 ASN A 66 GLN A 77 1 12 HELIX 4 AA4 ALA A 81 ALA A 94 1 14 HELIX 5 AA5 PRO A 109 LEU A 120 1 12 HELIX 6 AA6 PHE A 131 GLY A 135 5 5 HELIX 7 AA7 THR A 151 TYR A 155 5 5 HELIX 8 AA8 ASP A 163 HIS A 173 1 11 HELIX 9 AA9 SER A 196 THR A 213 1 18 HELIX 10 AB1 ILE A 214 GLU A 217 5 4 HELIX 11 AB2 THR A 223 GLY A 229 1 7 HELIX 12 AB3 SER B 16 GLN B 32 1 17 HELIX 13 AB4 LEU B 41 ASN B 45 1 5 HELIX 14 AB5 THR B 51 ILE B 55 5 5 HELIX 15 AB6 ASN B 66 GLN B 77 1 12 HELIX 16 AB7 ALA B 81 ALA B 94 1 14 HELIX 17 AB8 PRO B 109 LEU B 120 1 12 HELIX 18 AB9 PHE B 131 GLY B 135 5 5 HELIX 19 AC1 ASP B 163 HIS B 173 1 11 HELIX 20 AC2 SER B 196 THR B 213 1 18 HELIX 21 AC3 ILE B 214 GLU B 217 5 4 HELIX 22 AC4 THR B 223 GLY B 229 1 7 SHEET 1 AA1 5 THR A 35 ASP A 40 0 SHEET 2 AA1 5 LYS A 4 TYR A 9 1 N VAL A 5 O THR A 35 SHEET 3 AA1 5 LEU A 96 PRO A 102 1 O ILE A 98 N VAL A 8 SHEET 4 AA1 5 LEU A 141 THR A 147 1 O SER A 145 N PHE A 99 SHEET 5 AA1 5 LYS A 182 VAL A 183 1 O LYS A 182 N ALA A 142 SHEET 1 AA2 5 THR A 35 ASP A 40 0 SHEET 2 AA2 5 LYS A 4 TYR A 9 1 N VAL A 5 O THR A 35 SHEET 3 AA2 5 LEU A 96 PRO A 102 1 O ILE A 98 N VAL A 8 SHEET 4 AA2 5 LEU A 141 THR A 147 1 O SER A 145 N PHE A 99 SHEET 5 AA2 5 GLN A 187 SER A 189 1 O SER A 189 N VAL A 146 SHEET 1 AA3 5 THR B 35 ASP B 40 0 SHEET 2 AA3 5 LYS B 4 TYR B 9 1 N VAL B 5 O THR B 35 SHEET 3 AA3 5 LEU B 96 PRO B 102 1 O ILE B 98 N VAL B 8 SHEET 4 AA3 5 LEU B 141 THR B 147 1 O SER B 145 N PHE B 99 SHEET 5 AA3 5 LYS B 182 VAL B 183 1 O LYS B 182 N ALA B 142 SHEET 1 AA4 5 THR B 35 ASP B 40 0 SHEET 2 AA4 5 LYS B 4 TYR B 9 1 N VAL B 5 O THR B 35 SHEET 3 AA4 5 LEU B 96 PRO B 102 1 O ILE B 98 N VAL B 8 SHEET 4 AA4 5 LEU B 141 THR B 147 1 O SER B 145 N PHE B 99 SHEET 5 AA4 5 GLN B 187 SER B 189 1 O SER B 189 N VAL B 146 LINK ND1 HIS A 173 ZN ZN A 301 1555 1555 2.15 LINK ND1 HIS A 177 ZN ZN A 301 1555 1555 2.19 LINK O CYS A 222 ZN ZN A 301 1555 1555 2.17 LINK SG CYS A 222 ZN ZN A 301 1555 1555 2.22 LINK ND1 HIS B 173 ZN ZN B 302 1555 1555 2.18 LINK ND1 HIS B 177 ZN ZN B 302 1555 1555 2.25 LINK O CYS B 222 ZN ZN B 302 1555 1555 2.12 LINK SG CYS B 222 ZN ZN B 302 1555 1555 2.11 CISPEP 1 ILE A 128 PRO A 129 0 0.13 CISPEP 2 ILE B 128 PRO B 129 0 1.91 SITE 1 AC1 3 HIS A 173 HIS A 177 CYS A 222 SITE 1 AC2 26 HIS A 11 LYS A 15 SER A 16 PHE A 17 SITE 2 AC2 26 ASN A 18 SER A 20 PRO A 102 LEU A 103 SITE 3 AC2 26 TYR A 104 TRP A 105 PHE A 106 THR A 147 SITE 4 AC2 26 THR A 148 GLY A 149 GLY A 150 TYR A 155 SITE 5 AC2 26 GLU A 193 ARG A 200 LYS A 201 C09 A 305 SITE 6 AC2 26 HOH A 460 HOH A 483 HOH A 487 ASN B 66 SITE 7 AC2 26 ASP B 117 HOH B 476 SITE 1 AC3 6 SER A 196 GLU A 198 PRO A 221 THR A 223 SITE 2 AC3 6 HIS A 225 TRP A 226 SITE 1 AC4 4 GLU A 47 ARG A 49 GLU B 47 ARG B 49 SITE 1 AC5 10 TRP A 105 GLY A 149 GLY A 150 MET A 154 SITE 2 AC5 10 ASN A 161 FAD A 302 HOH A 417 PHE B 126 SITE 3 AC5 10 PHE B 131 PHE B 178 SITE 1 AC6 10 GLY A 68 GLN A 122 PHE A 126 PHE A 178 SITE 2 AC6 10 HOH A 409 TRP B 105 GLY B 149 GLY B 150 SITE 3 AC6 10 ASN B 161 FAD B 301 SITE 1 AC7 26 ASN A 66 ASP A 117 C09 A 306 HOH A 442 SITE 2 AC7 26 HIS B 11 LYS B 15 SER B 16 PHE B 17 SITE 3 AC7 26 ASN B 18 SER B 20 PRO B 102 LEU B 103 SITE 4 AC7 26 TYR B 104 TRP B 105 PHE B 106 THR B 147 SITE 5 AC7 26 THR B 148 GLY B 149 GLY B 150 TYR B 155 SITE 6 AC7 26 GLU B 193 GLU B 197 ARG B 200 HOH B 421 SITE 7 AC7 26 HOH B 422 HOH B 495 SITE 1 AC8 3 HIS B 173 HIS B 177 CYS B 222 SITE 1 AC9 3 ALA B 81 SER B 82 HOH B 417 SITE 1 AD1 5 PRO A 14 ASN A 23 HOH A 448 ARG B 31 SITE 2 AD1 5 C09 B 306 SITE 1 AD2 6 ARG A 31 PRO B 14 ASN B 23 C09 B 307 SITE 2 AD2 6 HOH B 413 HOH B 499 SITE 1 AD3 10 PRO A 14 LYS A 15 LYS A 22 ASN A 23 SITE 2 AD3 10 VAL A 26 ASP A 27 ASP B 27 SO4 B 304 SITE 3 AD3 10 C09 B 307 HOH B 505 SITE 1 AD4 6 ASP A 27 LYS B 22 ASN B 23 ASP B 27 SITE 2 AD4 6 SO4 B 305 C09 B 306 CRYST1 57.694 80.853 106.016 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017333 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012368 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009433 0.00000 CONECT 1377 3661 CONECT 1406 3661 CONECT 1780 3661 CONECT 1782 3661 CONECT 3207 3832 CONECT 3236 3832 CONECT 3596 3832 CONECT 3598 3832 CONECT 3661 1377 1406 1780 1782 CONECT 3662 3663 3664 3665 3714 CONECT 3663 3662 CONECT 3664 3662 CONECT 3665 3662 3666 CONECT 3666 3665 3667 CONECT 3667 3666 3668 3669 CONECT 3668 3667 3673 CONECT 3669 3667 3670 3671 CONECT 3670 3669 CONECT 3671 3669 3672 3673 CONECT 3672 3671 CONECT 3673 3668 3671 3674 CONECT 3674 3673 3675 3683 CONECT 3675 3674 3676 CONECT 3676 3675 3677 CONECT 3677 3676 3678 3683 CONECT 3678 3677 3679 3680 CONECT 3679 3678 CONECT 3680 3678 3681 CONECT 3681 3680 3682 CONECT 3682 3681 3683 CONECT 3683 3674 3677 3682 CONECT 3684 3685 3701 CONECT 3685 3684 3686 3687 CONECT 3686 3685 CONECT 3687 3685 3688 CONECT 3688 3687 3689 3690 CONECT 3689 3688 CONECT 3690 3688 3691 3701 CONECT 3691 3690 3692 CONECT 3692 3691 3693 3699 CONECT 3693 3692 3694 CONECT 3694 3693 3695 3696 CONECT 3695 3694 CONECT 3696 3694 3697 3698 CONECT 3697 3696 CONECT 3698 3696 3699 CONECT 3699 3692 3698 3700 CONECT 3700 3699 3701 3702 CONECT 3701 3684 3690 3700 CONECT 3702 3700 3703 CONECT 3703 3702 3704 3705 CONECT 3704 3703 CONECT 3705 3703 3706 3707 CONECT 3706 3705 CONECT 3707 3705 3708 3709 CONECT 3708 3707 CONECT 3709 3707 3710 CONECT 3710 3709 3711 CONECT 3711 3710 3712 3713 3714 CONECT 3712 3711 CONECT 3713 3711 CONECT 3714 3662 3711 CONECT 3715 3716 3717 3718 3719 CONECT 3716 3715 CONECT 3717 3715 CONECT 3718 3715 CONECT 3719 3715 CONECT 3720 3721 3722 3723 3724 CONECT 3721 3720 CONECT 3722 3720 CONECT 3723 3720 CONECT 3724 3720 CONECT 3725 3726 CONECT 3726 3725 3727 3742 CONECT 3727 3726 3728 3735 CONECT 3728 3727 3729 CONECT 3729 3728 3730 3734 CONECT 3730 3729 3731 CONECT 3731 3730 3732 CONECT 3732 3731 3733 CONECT 3733 3732 CONECT 3734 3729 3735 CONECT 3735 3727 3734 3736 CONECT 3736 3735 3737 3741 CONECT 3737 3736 3738 CONECT 3738 3737 3739 CONECT 3739 3738 3740 CONECT 3740 3739 3741 CONECT 3741 3736 3740 3742 CONECT 3742 3726 3741 CONECT 3743 3745 CONECT 3744 3746 CONECT 3745 3743 3747 3777 CONECT 3746 3744 3748 3778 CONECT 3747 3745 3749 3763 CONECT 3748 3746 3750 3764 CONECT 3749 3747 3751 CONECT 3750 3748 3752 CONECT 3751 3749 3753 3761 CONECT 3752 3750 3754 3762 CONECT 3753 3751 3755 CONECT 3754 3752 3756 CONECT 3755 3753 3757 CONECT 3756 3754 3758 CONECT 3757 3755 3759 CONECT 3758 3756 3760 CONECT 3759 3757 CONECT 3760 3758 CONECT 3761 3751 3763 CONECT 3762 3752 3764 CONECT 3763 3747 3761 3765 CONECT 3764 3748 3762 3766 CONECT 3765 3763 3767 3775 CONECT 3766 3764 3768 3776 CONECT 3767 3765 3769 CONECT 3768 3766 3770 CONECT 3769 3767 3771 CONECT 3770 3768 3772 CONECT 3771 3769 3773 CONECT 3772 3770 3774 CONECT 3773 3771 3775 CONECT 3774 3772 3776 CONECT 3775 3765 3773 3777 CONECT 3776 3766 3774 3778 CONECT 3777 3745 3775 CONECT 3778 3746 3776 CONECT 3779 3780 3781 3782 3831 CONECT 3780 3779 CONECT 3781 3779 CONECT 3782 3779 3783 CONECT 3783 3782 3784 CONECT 3784 3783 3785 3786 CONECT 3785 3784 3790 CONECT 3786 3784 3787 3788 CONECT 3787 3786 CONECT 3788 3786 3789 3790 CONECT 3789 3788 CONECT 3790 3785 3788 3791 CONECT 3791 3790 3792 3800 CONECT 3792 3791 3793 CONECT 3793 3792 3794 CONECT 3794 3793 3795 3800 CONECT 3795 3794 3796 3797 CONECT 3796 3795 CONECT 3797 3795 3798 CONECT 3798 3797 3799 CONECT 3799 3798 3800 CONECT 3800 3791 3794 3799 CONECT 3801 3802 3818 CONECT 3802 3801 3803 3804 CONECT 3803 3802 CONECT 3804 3802 3805 CONECT 3805 3804 3806 3807 CONECT 3806 3805 CONECT 3807 3805 3808 3818 CONECT 3808 3807 3809 CONECT 3809 3808 3810 3816 CONECT 3810 3809 3811 CONECT 3811 3810 3812 3813 CONECT 3812 3811 CONECT 3813 3811 3814 3815 CONECT 3814 3813 CONECT 3815 3813 3816 CONECT 3816 3809 3815 3817 CONECT 3817 3816 3818 3819 CONECT 3818 3801 3807 3817 CONECT 3819 3817 3820 CONECT 3820 3819 3821 3822 CONECT 3821 3820 CONECT 3822 3820 3823 3824 CONECT 3823 3822 CONECT 3824 3822 3825 3826 CONECT 3825 3824 CONECT 3826 3824 3827 CONECT 3827 3826 3828 CONECT 3828 3827 3829 3830 3831 CONECT 3829 3828 CONECT 3830 3828 CONECT 3831 3779 3828 CONECT 3832 3207 3236 3596 3598 CONECT 3833 3834 3835 3836 3837 CONECT 3834 3833 CONECT 3835 3833 CONECT 3836 3833 CONECT 3837 3833 CONECT 3838 3839 3840 3841 3842 CONECT 3839 3838 CONECT 3840 3838 CONECT 3841 3838 CONECT 3842 3838 CONECT 3843 3844 3845 3846 3847 CONECT 3844 3843 CONECT 3845 3843 CONECT 3846 3843 CONECT 3847 3843 CONECT 3848 3849 CONECT 3849 3848 3850 3865 CONECT 3850 3849 3851 3858 CONECT 3851 3850 3852 CONECT 3852 3851 3853 3857 CONECT 3853 3852 3854 CONECT 3854 3853 3855 CONECT 3855 3854 3856 CONECT 3856 3855 CONECT 3857 3852 3858 CONECT 3858 3850 3857 3859 CONECT 3859 3858 3860 3864 CONECT 3860 3859 3861 CONECT 3861 3860 3862 CONECT 3862 3861 3863 CONECT 3863 3862 3864 CONECT 3864 3859 3863 3865 CONECT 3865 3849 3864 CONECT 3866 3867 CONECT 3867 3866 3868 3883 CONECT 3868 3867 3869 3876 CONECT 3869 3868 3870 CONECT 3870 3869 3871 3875 CONECT 3871 3870 3872 CONECT 3872 3871 3873 CONECT 3873 3872 3874 CONECT 3874 3873 CONECT 3875 3870 3876 CONECT 3876 3868 3875 3877 CONECT 3877 3876 3878 3882 CONECT 3878 3877 3879 CONECT 3879 3878 3880 CONECT 3880 3879 3881 CONECT 3881 3880 3882 CONECT 3882 3877 3881 3883 CONECT 3883 3867 3882 MASTER 360 0 13 22 20 0 35 6 4078 2 231 38 END