data_5LIG # _entry.id 5LIG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.308 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 5LIG WWPDB D_1200000694 BMRB 34025 # _pdbx_database_related.db_name BMRB _pdbx_database_related.details . _pdbx_database_related.db_id 34025 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 5LIG _pdbx_database_status.recvd_initial_deposition_date 2016-07-14 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kotar, A.' 1 'Wang, B.' 2 'Shivalingam, A.' 3 'Gonzalez-Garcia, J.' 4 'Vilar, R.' 5 'Plavec, J.' 6 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country GE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_id_ASTM ACIEAY _citation.journal_id_CSD 0179 _citation.journal_id_ISSN 1521-3773 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 55 _citation.language ? _citation.page_first 12508 _citation.page_last 12511 _citation.title 'NMR Structure of a Triangulenium-Based Long-Lived Fluorescence Probe Bound to a G-Quadruplex.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/anie.201606877 _citation.pdbx_database_id_PubMed 27577037 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kotar, A.' 1 ? primary 'Wang, B.' 2 ? primary 'Shivalingam, A.' 3 ? primary 'Gonzalez-Garcia, J.' 4 ? primary 'Vilar, R.' 5 ? primary 'Plavec, J.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3') ; 6070.918 1 ? ? ? ? 2 non-polymer syn '8,12-bis(2-morpholinoethyl)-8H-benzo[ij]xantheno[1,9,8-cdef][2,7]naphthyridin-12-iumhexafluorophosphate' 510.627 2 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DT)(DA)(DG)(DG)(DG)(DA)(DG)(DG)(DG)(DT)(DA)(DG)(DG)(DG)(DA)(DG)(DG)(DG)(DT)' _entity_poly.pdbx_seq_one_letter_code_can TAGGGAGGGTAGGGAGGGT _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DA n 1 3 DG n 1 4 DG n 1 5 DG n 1 6 DA n 1 7 DG n 1 8 DG n 1 9 DG n 1 10 DT n 1 11 DA n 1 12 DG n 1 13 DG n 1 14 DG n 1 15 DA n 1 16 DG n 1 17 DG n 1 18 DG n 1 19 DT n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 19 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5LIG _struct_ref.pdbx_db_accession 5LIG _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 5LIG _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 19 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 5LIG _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 19 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 6XM non-polymer . '8,12-bis(2-morpholinoethyl)-8H-benzo[ij]xantheno[1,9,8-cdef][2,7]naphthyridin-12-iumhexafluorophosphate' ? 'C31 H34 N4 O3' 510.627 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 2 3 '2D 1H-1H TOCSY' 2 anisotropic 2 1 3 '2D 1H-1H TOCSY' 2 anisotropic 3 2 1 '2D 1H-1H NOESY' 1 anisotropic 4 1 2 '2D 1H-1H NOESY' 2 anisotropic 5 2 3 '2D 1H-1H DQF_COSY' 1 anisotropic 6 2 3 '2D 1H-31P COSY' 1 anisotropic 7 2 4 '13C HSQC' 1 anisotropic 8 2 4 '15N HSQC' 1 anisotropic 9 2 2 '2D 1H-13C HSQC' 1 anisotropic # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.details _pdbx_nmr_exptl_sample_conditions.ionic_strength_err _pdbx_nmr_exptl_sample_conditions.ionic_strength_units _pdbx_nmr_exptl_sample_conditions.label _pdbx_nmr_exptl_sample_conditions.pH_err _pdbx_nmr_exptl_sample_conditions.pH_units _pdbx_nmr_exptl_sample_conditions.pressure_err _pdbx_nmr_exptl_sample_conditions.temperature_err _pdbx_nmr_exptl_sample_conditions.temperature_units 1 278 atm 1 7.0 145 ? ? mM conditions_1 ? pH ? ? K 2 298 atm 1 7.0 140 ? ? mM conditions_2 ? pH ? ? K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system _pdbx_nmr_sample_details.label _pdbx_nmr_sample_details.type _pdbx_nmr_sample_details.details 1 ;0.2 mM DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3'), 100 mM potassium chloride, 20 mM potassium phosphate, 0.4 mM DAOTA-M2, 90% H2O/10% D2O ; '90% H2O/10% D2O' sample1 solution ? 2 ;0.2 mM DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3'), 100 mM potassium chloride, 10 mM LITHIUM CACODYLATE, 0.4 mM DAOTA-M2, 90% H2O/10% D2O ; '90% H2O/10% D2O' sample2 solution ? 3 ;0.2 mM DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3'), 100 mM potassium chloride, 20 mM potassium phosphate, 0.4 mM DAOTA-M2, 100% D2O ; '100% D2O' sample3 solution ? 4 ;0.2 mM U-8% 15N, U-8 %13C DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3'), 100 mM potassium chloride, 20 mM potassium phosphate, 0.4 mM DAOTA-M2, 90% H2O/10% D2O ; '90% H2O/10% D2O' sample4 solution ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 'Uniform NMR System' ? Varian 600 ? 2 'Uniform NMR System' ? Varian 800 ? # _pdbx_nmr_refine.entry_id 5LIG _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 5LIG _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 5LIG _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement Amber 14 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 2 'structure calculation' Amber 14 'Case, Darden, Cheatham III, Simmerling, Wang, Duke, Luo, ... and Kollman' 3 'chemical shift assignment' Sparky ? Goddard 4 'peak picking' Sparky ? Goddard 5 collection VNMR ? Varian 6 processing VNMR ? Varian # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5LIG _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 5LIG _struct.title ;G-Quadruplex formed at the 5'-end of NHEIII_1 Element in human c-MYC promoter bound to triangulenium based fluorescence probe DAOTA-M2 ; _struct.pdbx_descriptor ;DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3') ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5LIG _struct_keywords.text 'DNA, G-QUADRUPLEX, C-MYC PROMOTER, LIGAND, DAOTA-M2' _struct_keywords.pdbx_keywords DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order hydrog1 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DG 7 O6 ? ? A DG 3 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog2 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DG 7 N7 ? ? A DG 3 A DG 7 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog3 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 16 N2 ? ? A DG 3 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog4 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 16 N1 ? ? A DG 3 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog5 hydrog ? ? A DG 3 N7 ? ? ? 1_555 A DG 17 N2 ? ? A DG 3 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog6 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DG 17 N1 ? ? A DG 3 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog7 hydrog ? ? A DG 4 N1 ? ? ? 1_555 A DG 8 O6 ? ? A DG 4 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog8 hydrog ? ? A DG 4 N2 ? ? ? 1_555 A DG 8 N7 ? ? A DG 4 A DG 8 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog9 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG 17 N2 ? ? A DG 4 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog10 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG 17 N1 ? ? A DG 4 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog11 hydrog ? ? A DG 4 N7 ? ? ? 1_555 A DG 18 N2 ? ? A DG 4 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 A DG 18 N1 ? ? A DG 4 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog13 hydrog ? ? A DG 5 N1 ? ? ? 1_555 A DG 9 O6 ? ? A DG 5 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog14 hydrog ? ? A DG 5 N2 ? ? ? 1_555 A DG 9 N7 ? ? A DG 5 A DG 9 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog15 hydrog ? ? A DG 5 N7 ? ? ? 1_555 A DG 18 N2 ? ? A DG 5 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog16 hydrog ? ? A DG 5 O6 ? ? ? 1_555 A DG 18 N1 ? ? A DG 5 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog17 hydrog ? ? A DG 7 N1 ? ? ? 1_555 A DG 12 O6 ? ? A DG 7 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog18 hydrog ? ? A DG 7 N2 ? ? ? 1_555 A DG 12 N7 ? ? A DG 7 A DG 12 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog19 hydrog ? ? A DG 8 N1 ? ? ? 1_555 A DG 13 O6 ? ? A DG 8 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog20 hydrog ? ? A DG 8 N2 ? ? ? 1_555 A DG 13 N7 ? ? A DG 8 A DG 13 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog21 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DA 11 N3 ? ? A DG 9 A DA 11 1_555 ? ? ? ? ? ? 'DG-DA MISPAIR' ? ? hydrog22 hydrog ? ? A DG 9 N1 ? ? ? 1_555 A DG 14 O6 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog23 hydrog ? ? A DG 9 N2 ? ? ? 1_555 A DG 14 N7 ? ? A DG 9 A DG 14 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog24 hydrog ? ? A DG 12 N1 ? ? ? 1_555 A DG 16 O6 ? ? A DG 12 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog25 hydrog ? ? A DG 12 N2 ? ? ? 1_555 A DG 16 N7 ? ? A DG 12 A DG 16 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog26 hydrog ? ? A DG 13 N1 ? ? ? 1_555 A DG 17 O6 ? ? A DG 13 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog27 hydrog ? ? A DG 13 N2 ? ? ? 1_555 A DG 17 N7 ? ? A DG 13 A DG 17 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog28 hydrog ? ? A DG 14 N1 ? ? ? 1_555 A DG 18 O6 ? ? A DG 14 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? hydrog29 hydrog ? ? A DG 14 N2 ? ? ? 1_555 A DG 18 N7 ? ? A DG 14 A DG 18 1_555 ? ? ? ? ? ? TYPE_6_PAIR ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A 6XM 101 ? 5 'binding site for residue 6XM A 101' AC2 Software A 6XM 102 ? 7 'binding site for residue 6XM A 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 DT A 1 ? DT A 1 . ? 1_555 ? 2 AC1 5 DA A 2 ? DA A 2 . ? 1_555 ? 3 AC1 5 DG A 7 ? DG A 7 . ? 1_555 ? 4 AC1 5 DG A 12 ? DG A 12 . ? 1_555 ? 5 AC1 5 DG A 16 ? DG A 16 . ? 1_555 ? 6 AC2 7 DG A 5 ? DG A 5 . ? 1_555 ? 7 AC2 7 DG A 9 ? DG A 9 . ? 1_555 ? 8 AC2 7 DT A 10 ? DT A 10 . ? 1_555 ? 9 AC2 7 DA A 11 ? DA A 11 . ? 1_555 ? 10 AC2 7 DG A 14 ? DG A 14 . ? 1_555 ? 11 AC2 7 DG A 18 ? DG A 18 . ? 1_555 ? 12 AC2 7 DT A 19 ? DT A 19 . ? 1_555 ? # _atom_sites.entry_id 5LIG _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _database_PDB_caveat.id _database_PDB_caveat.text 1 '6XM A 101 HAS WRONG CHIRALITY AT ATOM C11' 2 '6XM A 102 HAS WRONG CHIRALITY AT ATOM C11' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT DT A . n A 1 2 DA 2 2 2 DA DA A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DG 4 4 4 DG DG A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DA 6 6 6 DA DA A . n A 1 7 DG 7 7 7 DG DG A . n A 1 8 DG 8 8 8 DG DG A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DT 10 10 10 DT DT A . n A 1 11 DA 11 11 11 DA DA A . n A 1 12 DG 12 12 12 DG DG A . n A 1 13 DG 13 13 13 DG DG A . n A 1 14 DG 14 14 14 DG DG A . n A 1 15 DA 15 15 15 DA DA A . n A 1 16 DG 16 16 16 DG DG A . n A 1 17 DG 17 17 17 DG DG A . n A 1 18 DG 18 18 18 DG DG A . n A 1 19 DT 19 19 19 DT DT A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6XM 1 101 20 6XM DA0 A . C 2 6XM 1 102 21 6XM DA0 A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 4060 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-09-14 2 'Structure model' 1 1 2016-09-28 3 'Structure model' 1 2 2018-02-14 4 'Structure model' 2 0 2018-03-07 5 'Structure model' 2 1 2019-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_nmr_spectrometer 2 4 'Structure model' atom_site 3 4 'Structure model' database_PDB_caveat 4 4 'Structure model' struct_conn 5 5 'Structure model' pdbx_nmr_software 6 5 'Structure model' pdbx_seq_map_depositor_info # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_nmr_spectrometer.manufacturer' 2 4 'Structure model' '_atom_site.Cartn_x' 3 4 'Structure model' '_atom_site.Cartn_y' 4 4 'Structure model' '_atom_site.Cartn_z' 5 4 'Structure model' '_atom_site.auth_atom_id' 6 4 'Structure model' '_atom_site.label_atom_id' 7 4 'Structure model' '_chem_comp.formula' 8 5 'Structure model' '_pdbx_nmr_software.name' 9 5 'Structure model' '_pdbx_seq_map_depositor_info.one_letter_code_mod' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 ;DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3') ; 0.2 ? mM 'natural abundance' 1 'potassium chloride' 100 ? mM 'natural abundance' 1 'potassium phosphate' 20 ? mM 'natural abundance' 1 DAOTA-M2 0.4 ? mM 'natural abundance' 2 ;DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3') ; 0.2 ? mM 'natural abundance' 2 'potassium chloride' 100 ? mM 'natural abundance' 2 'LITHIUM CACODYLATE' 10 ? mM 'natural abundance' 2 DAOTA-M2 0.4 ? mM 'natural abundance' 3 ;DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3') ; 0.2 ? mM 'natural abundance' 3 'potassium chloride' 100 ? mM 'natural abundance' 3 'potassium phosphate' 20 ? mM 'natural abundance' 3 DAOTA-M2 0.4 ? mM 'natural abundance' 4 ;DNA (5'-D(*TP*AP*GP*GP*GP*AP*GP*GP*GP*TP*AP*GP*GP*GP*AP*GP*GP*GP*T)-3') ; 0.2 ? mM 'U-8% 15N, U-8 %13C' 4 'potassium chloride' 100 ? mM 'natural abundance' 4 'potassium phosphate' 20 ? mM 'natural abundance' 4 DAOTA-M2 0.4 ? mM 'natural abundance' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 114.43 108.30 6.13 0.30 N 2 1 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.63 122.90 -4.27 0.60 N 3 1 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 111.50 108.30 3.20 0.30 N 4 1 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.80 117.00 -3.20 0.50 N 5 1 C5 A DA 2 ? ? C6 A DA 2 ? ? N1 A DA 2 ? ? 121.49 117.70 3.79 0.50 N 6 1 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 113.20 118.60 -5.40 0.60 N 7 1 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.02 108.30 3.72 0.30 N 8 1 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.68 108.30 2.38 0.30 N 9 1 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.30 108.30 2.00 0.30 N 10 1 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.68 117.00 -3.32 0.50 N 11 1 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.46 117.70 3.76 0.50 N 12 1 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 112.98 118.60 -5.62 0.60 N 13 1 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.31 108.30 3.01 0.30 N 14 1 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.24 108.30 2.94 0.30 N 15 1 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.65 108.30 4.35 0.30 N 16 1 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.61 108.30 3.31 0.30 N 17 1 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.27 122.90 -3.63 0.60 N 18 1 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 111.71 108.30 3.41 0.30 N 19 1 C4 A DA 11 ? ? C5 A DA 11 ? ? C6 A DA 11 ? ? 113.74 117.00 -3.26 0.50 N 20 1 C5 A DA 11 ? ? C6 A DA 11 ? ? N1 A DA 11 ? ? 121.40 117.70 3.70 0.50 N 21 1 N1 A DA 11 ? ? C6 A DA 11 ? ? N6 A DA 11 ? ? 113.07 118.60 -5.53 0.60 N 22 1 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 112.53 108.30 4.23 0.30 N 23 1 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.64 117.00 -3.36 0.50 N 24 1 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.48 117.70 3.78 0.50 N 25 1 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 112.96 118.60 -5.64 0.60 N 26 1 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.17 108.30 2.87 0.30 N 27 1 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 111.79 108.30 3.49 0.30 N 28 1 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 112.49 108.30 4.19 0.30 N 29 1 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 112.67 108.30 4.37 0.30 N 30 2 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 113.71 108.30 5.41 0.30 N 31 2 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.56 122.90 -4.34 0.60 N 32 2 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 111.60 108.30 3.30 0.30 N 33 2 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.89 117.00 -3.11 0.50 N 34 2 C5 A DA 2 ? ? C6 A DA 2 ? ? N1 A DA 2 ? ? 121.42 117.70 3.72 0.50 N 35 2 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 113.08 118.60 -5.52 0.60 N 36 2 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.57 108.30 3.27 0.30 N 37 2 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.72 108.30 2.42 0.30 N 38 2 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 111.01 108.30 2.71 0.30 N 39 2 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.61 117.00 -3.39 0.50 N 40 2 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.47 117.70 3.77 0.50 N 41 2 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 112.97 118.60 -5.63 0.60 N 42 2 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.24 108.30 2.94 0.30 N 43 2 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.67 108.30 2.37 0.30 N 44 2 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.45 108.30 2.15 0.30 N 45 2 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.15 122.90 -3.75 0.60 N 46 2 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 110.57 108.30 2.27 0.30 N 47 2 C4 A DA 11 ? ? C5 A DA 11 ? ? C6 A DA 11 ? ? 113.74 117.00 -3.26 0.50 N 48 2 C5 A DA 11 ? ? C6 A DA 11 ? ? N1 A DA 11 ? ? 121.48 117.70 3.78 0.50 N 49 2 N1 A DA 11 ? ? C6 A DA 11 ? ? N6 A DA 11 ? ? 113.13 118.60 -5.47 0.60 N 50 2 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.17 108.30 1.87 0.30 N 51 2 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 112.67 108.30 4.37 0.30 N 52 2 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 113.43 108.30 5.13 0.30 N 53 2 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 110.11 108.30 1.81 0.30 N 54 2 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.63 117.00 -3.37 0.50 N 55 2 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.45 117.70 3.75 0.50 N 56 2 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 113.01 118.60 -5.59 0.60 N 57 2 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.75 108.30 2.45 0.30 N 58 2 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 110.38 108.30 2.08 0.30 N 59 2 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 112.11 108.30 3.81 0.30 N 60 2 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 110.91 108.30 2.61 0.30 N 61 2 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 118.91 122.90 -3.99 0.60 N 62 3 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 114.33 108.30 6.03 0.30 N 63 3 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.50 122.90 -4.40 0.60 N 64 3 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? "C2'" A DA 2 ? ? 100.91 105.90 -4.99 0.80 N 65 3 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 112.45 108.30 4.15 0.30 N 66 3 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.89 117.00 -3.11 0.50 N 67 3 C5 A DA 2 ? ? C6 A DA 2 ? ? N1 A DA 2 ? ? 121.45 117.70 3.75 0.50 N 68 3 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 113.18 118.60 -5.42 0.60 N 69 3 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.01 108.30 3.71 0.30 N 70 3 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.11 108.30 2.81 0.30 N 71 3 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.50 108.30 2.20 0.30 N 72 3 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.67 117.00 -3.33 0.50 N 73 3 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.39 117.70 3.69 0.50 N 74 3 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 113.05 118.60 -5.55 0.60 N 75 3 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.11 108.30 3.81 0.30 N 76 3 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.45 108.30 3.15 0.30 N 77 3 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 112.01 108.30 3.71 0.30 N 78 3 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.29 122.90 -3.61 0.60 N 79 3 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 112.91 108.30 4.61 0.30 N 80 3 C4 A DA 11 ? ? C5 A DA 11 ? ? C6 A DA 11 ? ? 113.61 117.00 -3.39 0.50 N 81 3 C5 A DA 11 ? ? C6 A DA 11 ? ? N1 A DA 11 ? ? 121.17 117.70 3.47 0.50 N 82 3 N1 A DA 11 ? ? C6 A DA 11 ? ? N6 A DA 11 ? ? 113.06 118.60 -5.54 0.60 N 83 3 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 111.10 108.30 2.80 0.30 N 84 3 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 112.10 108.30 3.80 0.30 N 85 3 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 112.33 108.30 4.03 0.30 N 86 3 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 110.45 108.30 2.15 0.30 N 87 3 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.65 117.00 -3.35 0.50 N 88 3 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.52 117.70 3.82 0.50 N 89 3 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 112.92 118.60 -5.68 0.60 N 90 3 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.12 108.30 2.82 0.30 N 91 3 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 112.17 108.30 3.87 0.30 N 92 3 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 111.57 108.30 3.27 0.30 N 93 3 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 119.18 122.90 -3.72 0.60 N 94 4 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 113.14 108.30 4.84 0.30 N 95 4 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 117.30 122.90 -5.60 0.60 N 96 4 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 112.67 108.30 4.37 0.30 N 97 4 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.83 117.00 -3.17 0.50 N 98 4 C5 A DA 2 ? ? C6 A DA 2 ? ? N1 A DA 2 ? ? 121.54 117.70 3.84 0.50 N 99 4 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 113.08 118.60 -5.52 0.60 N 100 4 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.32 108.30 4.02 0.30 N 101 4 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.57 108.30 2.27 0.30 N 102 4 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.49 108.30 2.19 0.30 N 103 4 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.66 117.00 -3.34 0.50 N 104 4 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.48 117.70 3.78 0.50 N 105 4 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 113.00 118.60 -5.60 0.60 N 106 4 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.81 108.30 2.51 0.30 N 107 4 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.96 108.30 2.66 0.30 N 108 4 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 111.58 108.30 3.28 0.30 N 109 4 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.57 108.30 3.27 0.30 N 110 4 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 111.41 108.30 3.11 0.30 N 111 4 C4 A DA 11 ? ? C5 A DA 11 ? ? C6 A DA 11 ? ? 113.76 117.00 -3.24 0.50 N 112 4 C5 A DA 11 ? ? C6 A DA 11 ? ? N1 A DA 11 ? ? 121.36 117.70 3.66 0.50 N 113 4 N1 A DA 11 ? ? C6 A DA 11 ? ? N6 A DA 11 ? ? 112.97 118.60 -5.63 0.60 N 114 4 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 112.77 108.30 4.47 0.30 N 115 4 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 110.28 108.30 1.98 0.30 N 116 4 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.63 117.00 -3.37 0.50 N 117 4 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.51 117.70 3.81 0.50 N 118 4 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 112.99 118.60 -5.61 0.60 N 119 4 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.53 108.30 3.23 0.30 N 120 4 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 110.54 108.30 2.24 0.30 N 121 4 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 112.25 108.30 3.95 0.30 N 122 4 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 111.99 108.30 3.69 0.30 N 123 4 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 119.26 122.90 -3.64 0.60 N 124 5 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 114.38 108.30 6.08 0.30 N 125 5 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.61 122.90 -4.29 0.60 N 126 5 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 110.59 108.30 2.29 0.30 N 127 5 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.76 117.00 -3.24 0.50 N 128 5 C5 A DA 2 ? ? C6 A DA 2 ? ? N1 A DA 2 ? ? 121.55 117.70 3.85 0.50 N 129 5 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 113.03 118.60 -5.57 0.60 N 130 5 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.82 108.30 3.52 0.30 N 131 5 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.88 108.30 3.58 0.30 N 132 5 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.32 108.30 2.02 0.30 N 133 5 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.62 117.00 -3.38 0.50 N 134 5 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.52 117.70 3.82 0.50 N 135 5 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 112.97 118.60 -5.63 0.60 N 136 5 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.50 108.30 2.20 0.30 N 137 5 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.45 108.30 3.15 0.30 N 138 5 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.03 108.30 3.73 0.30 N 139 5 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.34 108.30 3.04 0.30 N 140 5 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.29 122.90 -3.61 0.60 N 141 5 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 113.13 108.30 4.83 0.30 N 142 5 C4 A DA 11 ? ? C5 A DA 11 ? ? C6 A DA 11 ? ? 113.45 117.00 -3.55 0.50 N 143 5 C5 A DA 11 ? ? C6 A DA 11 ? ? N1 A DA 11 ? ? 121.19 117.70 3.49 0.50 N 144 5 N1 A DA 11 ? ? C6 A DA 11 ? ? N6 A DA 11 ? ? 113.12 118.60 -5.48 0.60 N 145 5 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 112.23 108.30 3.93 0.30 N 146 5 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 110.30 108.30 2.00 0.30 N 147 5 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.72 117.00 -3.28 0.50 N 148 5 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.45 117.70 3.75 0.50 N 149 5 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 113.00 118.60 -5.60 0.60 N 150 5 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.08 108.30 2.78 0.30 N 151 5 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 112.05 108.30 3.75 0.30 N 152 5 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 112.25 108.30 3.95 0.30 N 153 5 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 111.29 108.30 2.99 0.30 N 154 5 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 119.12 122.90 -3.78 0.60 N 155 6 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.36 108.30 4.06 0.30 N 156 6 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.78 122.90 -4.12 0.60 N 157 6 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.73 117.00 -3.27 0.50 N 158 6 C5 A DA 2 ? ? C6 A DA 2 ? ? N1 A DA 2 ? ? 121.56 117.70 3.86 0.50 N 159 6 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 112.95 118.60 -5.65 0.60 N 160 6 "O4'" A DG 3 ? ? "C1'" A DG 3 ? ? N9 A DG 3 ? ? 110.64 108.30 2.34 0.30 N 161 6 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.58 108.30 2.28 0.30 N 162 6 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.95 108.30 3.65 0.30 N 163 6 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 111.24 108.30 2.94 0.30 N 164 6 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.71 117.00 -3.29 0.50 N 165 6 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.44 117.70 3.74 0.50 N 166 6 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 112.96 118.60 -5.64 0.60 N 167 6 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 112.68 108.30 4.38 0.30 N 168 6 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.55 108.30 3.25 0.30 N 169 6 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.65 108.30 2.35 0.30 N 170 6 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.98 108.30 3.68 0.30 N 171 6 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 111.03 108.30 2.73 0.30 N 172 6 C4 A DA 11 ? ? C5 A DA 11 ? ? C6 A DA 11 ? ? 113.83 117.00 -3.17 0.50 N 173 6 C5 A DA 11 ? ? C6 A DA 11 ? ? N1 A DA 11 ? ? 121.43 117.70 3.73 0.50 N 174 6 N1 A DA 11 ? ? C6 A DA 11 ? ? N6 A DA 11 ? ? 113.09 118.60 -5.51 0.60 N 175 6 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.68 108.30 2.38 0.30 N 176 6 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 111.64 108.30 3.34 0.30 N 177 6 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 112.71 108.30 4.41 0.30 N 178 6 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 110.82 108.30 2.52 0.30 N 179 6 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.72 117.00 -3.28 0.50 N 180 6 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.43 117.70 3.73 0.50 N 181 6 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 113.00 118.60 -5.60 0.60 N 182 6 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.58 108.30 2.28 0.30 N 183 6 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 113.41 108.30 5.11 0.30 N 184 6 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 112.08 108.30 3.78 0.30 N 185 6 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 112.28 108.30 3.98 0.30 N 186 7 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 114.35 108.30 6.05 0.30 N 187 7 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.54 122.90 -4.36 0.60 N 188 7 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 111.08 108.30 2.78 0.30 N 189 7 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.85 117.00 -3.15 0.50 N 190 7 C5 A DA 2 ? ? C6 A DA 2 ? ? N1 A DA 2 ? ? 121.48 117.70 3.78 0.50 N 191 7 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 113.11 118.60 -5.49 0.60 N 192 7 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.06 108.30 2.76 0.30 N 193 7 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 110.64 108.30 2.34 0.30 N 194 7 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 111.52 108.30 3.22 0.30 N 195 7 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.62 117.00 -3.38 0.50 N 196 7 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.45 117.70 3.75 0.50 N 197 7 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 113.02 118.60 -5.58 0.60 N 198 7 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 110.76 108.30 2.46 0.30 N 199 7 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 110.37 108.30 2.07 0.30 N 200 7 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.45 108.30 3.15 0.30 N 201 7 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.17 122.90 -3.73 0.60 N 202 7 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 111.49 108.30 3.19 0.30 N 203 7 C4 A DA 11 ? ? C5 A DA 11 ? ? C6 A DA 11 ? ? 113.78 117.00 -3.22 0.50 N 204 7 C5 A DA 11 ? ? C6 A DA 11 ? ? N1 A DA 11 ? ? 121.40 117.70 3.70 0.50 N 205 7 N1 A DA 11 ? ? C6 A DA 11 ? ? N6 A DA 11 ? ? 113.09 118.60 -5.51 0.60 N 206 7 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 113.72 108.30 5.42 0.30 N 207 7 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.63 117.00 -3.37 0.50 N 208 7 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.45 117.70 3.75 0.50 N 209 7 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 113.00 118.60 -5.60 0.60 N 210 7 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 111.03 108.30 2.73 0.30 N 211 7 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 110.29 108.30 1.99 0.30 N 212 7 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 112.57 108.30 4.27 0.30 N 213 7 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 111.15 108.30 2.85 0.30 N 214 7 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 119.01 122.90 -3.89 0.60 N 215 8 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 112.90 108.30 4.60 0.30 N 216 8 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.25 122.90 -4.65 0.60 N 217 8 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? "C2'" A DA 2 ? ? 100.94 105.90 -4.96 0.80 N 218 8 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 111.65 108.30 3.35 0.30 N 219 8 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.90 117.00 -3.10 0.50 N 220 8 C5 A DA 2 ? ? C6 A DA 2 ? ? N1 A DA 2 ? ? 121.42 117.70 3.72 0.50 N 221 8 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 113.18 118.60 -5.42 0.60 N 222 8 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 111.01 108.30 2.71 0.30 N 223 8 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.93 108.30 3.63 0.30 N 224 8 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.76 108.30 2.46 0.30 N 225 8 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.59 117.00 -3.41 0.50 N 226 8 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.50 117.70 3.80 0.50 N 227 8 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 112.96 118.60 -5.64 0.60 N 228 8 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 111.06 108.30 2.76 0.30 N 229 8 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 111.36 108.30 3.06 0.30 N 230 8 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.94 108.30 4.64 0.30 N 231 8 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 112.03 108.30 3.73 0.30 N 232 8 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 111.55 108.30 3.25 0.30 N 233 8 C4 A DA 11 ? ? C5 A DA 11 ? ? C6 A DA 11 ? ? 113.74 117.00 -3.26 0.50 N 234 8 C5 A DA 11 ? ? C6 A DA 11 ? ? N1 A DA 11 ? ? 121.37 117.70 3.67 0.50 N 235 8 N1 A DA 11 ? ? C6 A DA 11 ? ? N6 A DA 11 ? ? 113.12 118.60 -5.48 0.60 N 236 8 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 110.32 108.30 2.02 0.30 N 237 8 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 112.44 108.30 4.14 0.30 N 238 8 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 110.99 108.30 2.69 0.30 N 239 8 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.69 117.00 -3.31 0.50 N 240 8 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.56 117.70 3.86 0.50 N 241 8 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 112.87 118.60 -5.73 0.60 N 242 8 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.55 108.30 2.25 0.30 N 243 8 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 111.33 108.30 3.03 0.30 N 244 8 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 112.35 108.30 4.05 0.30 N 245 8 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 112.37 108.30 4.07 0.30 N 246 8 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 119.29 122.90 -3.61 0.60 N 247 9 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 114.97 108.30 6.67 0.30 N 248 9 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.47 122.90 -4.43 0.60 N 249 9 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 110.89 108.30 2.59 0.30 N 250 9 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.73 117.00 -3.27 0.50 N 251 9 C5 A DA 2 ? ? C6 A DA 2 ? ? N1 A DA 2 ? ? 121.58 117.70 3.88 0.50 N 252 9 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 112.90 118.60 -5.70 0.60 N 253 9 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 110.35 108.30 2.05 0.30 N 254 9 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 111.29 108.30 2.99 0.30 N 255 9 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.77 108.30 2.47 0.30 N 256 9 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.66 117.00 -3.34 0.50 N 257 9 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.48 117.70 3.78 0.50 N 258 9 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 113.04 118.60 -5.56 0.60 N 259 9 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.49 108.30 2.19 0.30 N 260 9 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.64 108.30 4.34 0.30 N 261 9 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 112.63 108.30 4.33 0.30 N 262 9 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 112.39 108.30 4.09 0.30 N 263 9 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.25 122.90 -3.65 0.60 N 264 9 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 112.14 108.30 3.84 0.30 N 265 9 C4 A DA 11 ? ? C5 A DA 11 ? ? C6 A DA 11 ? ? 113.94 117.00 -3.06 0.50 N 266 9 C5 A DA 11 ? ? C6 A DA 11 ? ? N1 A DA 11 ? ? 121.26 117.70 3.56 0.50 N 267 9 N1 A DA 11 ? ? C6 A DA 11 ? ? N6 A DA 11 ? ? 113.15 118.60 -5.45 0.60 N 268 9 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.16 108.30 1.86 0.30 N 269 9 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 110.55 108.30 2.25 0.30 N 270 9 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 111.23 108.30 2.93 0.30 N 271 9 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.67 117.00 -3.33 0.50 N 272 9 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.46 117.70 3.76 0.50 N 273 9 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 112.95 118.60 -5.65 0.60 N 274 9 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.56 108.30 2.26 0.30 N 275 9 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 111.17 108.30 2.87 0.30 N 276 9 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 112.20 108.30 3.90 0.30 N 277 9 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 112.33 108.30 4.03 0.30 N 278 10 "O4'" A DT 1 ? ? "C1'" A DT 1 ? ? N1 A DT 1 ? ? 111.90 108.30 3.60 0.30 N 279 10 C6 A DT 1 ? ? C5 A DT 1 ? ? C7 A DT 1 ? ? 118.85 122.90 -4.05 0.60 N 280 10 "O4'" A DA 2 ? ? "C1'" A DA 2 ? ? N9 A DA 2 ? ? 110.59 108.30 2.29 0.30 N 281 10 C4 A DA 2 ? ? C5 A DA 2 ? ? C6 A DA 2 ? ? 113.79 117.00 -3.21 0.50 N 282 10 C5 A DA 2 ? ? C6 A DA 2 ? ? N1 A DA 2 ? ? 121.50 117.70 3.80 0.50 N 283 10 N1 A DA 2 ? ? C6 A DA 2 ? ? N6 A DA 2 ? ? 113.28 118.60 -5.32 0.60 N 284 10 "O4'" A DG 4 ? ? "C1'" A DG 4 ? ? N9 A DG 4 ? ? 112.35 108.30 4.05 0.30 N 285 10 "O4'" A DG 5 ? ? "C1'" A DG 5 ? ? N9 A DG 5 ? ? 113.14 108.30 4.84 0.30 N 286 10 "O4'" A DA 6 ? ? "C1'" A DA 6 ? ? N9 A DA 6 ? ? 110.64 108.30 2.34 0.30 N 287 10 C4 A DA 6 ? ? C5 A DA 6 ? ? C6 A DA 6 ? ? 113.71 117.00 -3.29 0.50 N 288 10 C5 A DA 6 ? ? C6 A DA 6 ? ? N1 A DA 6 ? ? 121.43 117.70 3.73 0.50 N 289 10 N1 A DA 6 ? ? C6 A DA 6 ? ? N6 A DA 6 ? ? 112.95 118.60 -5.65 0.60 N 290 10 "O4'" A DG 7 ? ? "C1'" A DG 7 ? ? N9 A DG 7 ? ? 110.10 108.30 1.80 0.30 N 291 10 "O4'" A DG 8 ? ? "C1'" A DG 8 ? ? N9 A DG 8 ? ? 112.50 108.30 4.20 0.30 N 292 10 "O4'" A DG 9 ? ? "C1'" A DG 9 ? ? N9 A DG 9 ? ? 113.10 108.30 4.80 0.30 N 293 10 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 111.02 108.30 2.72 0.30 N 294 10 C6 A DT 10 ? ? C5 A DT 10 ? ? C7 A DT 10 ? ? 119.24 122.90 -3.66 0.60 N 295 10 "O4'" A DA 11 ? ? "C1'" A DA 11 ? ? N9 A DA 11 ? ? 112.39 108.30 4.09 0.30 N 296 10 C4 A DA 11 ? ? C5 A DA 11 ? ? C6 A DA 11 ? ? 113.61 117.00 -3.39 0.50 N 297 10 C5 A DA 11 ? ? C6 A DA 11 ? ? N1 A DA 11 ? ? 121.08 117.70 3.38 0.50 N 298 10 N1 A DA 11 ? ? C6 A DA 11 ? ? N6 A DA 11 ? ? 113.12 118.60 -5.48 0.60 N 299 10 "O4'" A DG 12 ? ? "C1'" A DG 12 ? ? N9 A DG 12 ? ? 110.12 108.30 1.82 0.30 N 300 10 "O4'" A DG 13 ? ? "C1'" A DG 13 ? ? N9 A DG 13 ? ? 113.37 108.30 5.07 0.30 N 301 10 "O4'" A DG 14 ? ? "C1'" A DG 14 ? ? N9 A DG 14 ? ? 114.17 108.30 5.87 0.30 N 302 10 "O4'" A DA 15 ? ? "C1'" A DA 15 ? ? N9 A DA 15 ? ? 111.61 108.30 3.31 0.30 N 303 10 C4 A DA 15 ? ? C5 A DA 15 ? ? C6 A DA 15 ? ? 113.66 117.00 -3.34 0.50 N 304 10 C5 A DA 15 ? ? C6 A DA 15 ? ? N1 A DA 15 ? ? 121.48 117.70 3.78 0.50 N 305 10 N1 A DA 15 ? ? C6 A DA 15 ? ? N6 A DA 15 ? ? 112.89 118.60 -5.71 0.60 N 306 10 "O4'" A DG 16 ? ? "C1'" A DG 16 ? ? N9 A DG 16 ? ? 110.70 108.30 2.40 0.30 N 307 10 "O4'" A DG 17 ? ? "C1'" A DG 17 ? ? N9 A DG 17 ? ? 111.58 108.30 3.28 0.30 N 308 10 "O4'" A DG 18 ? ? "C1'" A DG 18 ? ? N9 A DG 18 ? ? 112.63 108.30 4.33 0.30 N 309 10 "O4'" A DT 19 ? ? "C1'" A DT 19 ? ? N1 A DT 19 ? ? 111.32 108.30 3.02 0.30 N 310 10 C6 A DT 19 ? ? C5 A DT 19 ? ? C7 A DT 19 ? ? 118.99 122.90 -3.91 0.60 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG A 9 ? ? 0.081 'SIDE CHAIN' 2 1 DG A 18 ? ? 0.081 'SIDE CHAIN' 3 2 DT A 1 ? ? 0.070 'SIDE CHAIN' 4 2 DG A 12 ? ? 0.074 'SIDE CHAIN' 5 2 DG A 18 ? ? 0.091 'SIDE CHAIN' 6 3 DT A 1 ? ? 0.069 'SIDE CHAIN' 7 3 DG A 18 ? ? 0.080 'SIDE CHAIN' 8 4 DT A 1 ? ? 0.077 'SIDE CHAIN' 9 4 DG A 12 ? ? 0.089 'SIDE CHAIN' 10 4 DG A 18 ? ? 0.083 'SIDE CHAIN' 11 5 DT A 1 ? ? 0.059 'SIDE CHAIN' 12 5 DG A 9 ? ? 0.049 'SIDE CHAIN' 13 5 DA A 11 ? ? 0.052 'SIDE CHAIN' 14 5 DG A 12 ? ? 0.073 'SIDE CHAIN' 15 5 DG A 18 ? ? 0.064 'SIDE CHAIN' 16 6 DG A 7 ? ? 0.053 'SIDE CHAIN' 17 6 DG A 12 ? ? 0.099 'SIDE CHAIN' 18 6 DG A 18 ? ? 0.076 'SIDE CHAIN' 19 7 DT A 1 ? ? 0.067 'SIDE CHAIN' 20 7 DG A 12 ? ? 0.060 'SIDE CHAIN' 21 7 DG A 14 ? ? 0.064 'SIDE CHAIN' 22 7 DG A 18 ? ? 0.076 'SIDE CHAIN' 23 8 DT A 1 ? ? 0.074 'SIDE CHAIN' 24 8 DG A 18 ? ? 0.081 'SIDE CHAIN' 25 9 DT A 1 ? ? 0.114 'SIDE CHAIN' 26 9 DG A 13 ? ? 0.067 'SIDE CHAIN' 27 9 DG A 16 ? ? 0.054 'SIDE CHAIN' 28 9 DG A 18 ? ? 0.092 'SIDE CHAIN' 29 10 DG A 4 ? ? 0.056 'SIDE CHAIN' 30 10 DG A 9 ? ? 0.086 'SIDE CHAIN' 31 10 DA A 11 ? ? 0.064 'SIDE CHAIN' 32 10 DG A 12 ? ? 0.055 'SIDE CHAIN' 33 10 DG A 18 ? ? 0.076 'SIDE CHAIN' # loop_ _pdbx_validate_chiral.id _pdbx_validate_chiral.PDB_model_num _pdbx_validate_chiral.auth_atom_id _pdbx_validate_chiral.label_alt_id _pdbx_validate_chiral.auth_asym_id _pdbx_validate_chiral.auth_comp_id _pdbx_validate_chiral.auth_seq_id _pdbx_validate_chiral.PDB_ins_code _pdbx_validate_chiral.details _pdbx_validate_chiral.omega 1 1 C11 ? A 6XM 101 ? PLANAR . 2 1 C11 ? A 6XM 102 ? PLANAR . 3 2 C11 ? A 6XM 101 ? PLANAR . 4 2 C11 ? A 6XM 102 ? PLANAR . 5 3 C11 ? A 6XM 101 ? PLANAR . 6 3 C11 ? A 6XM 102 ? PLANAR . 7 4 C11 ? A 6XM 101 ? PLANAR . 8 4 C11 ? A 6XM 102 ? PLANAR . 9 5 C11 ? A 6XM 101 ? PLANAR . 10 5 C11 ? A 6XM 102 ? PLANAR . 11 6 C11 ? A 6XM 101 ? PLANAR . 12 6 C11 ? A 6XM 102 ? PLANAR . 13 7 C11 ? A 6XM 101 ? PLANAR . 14 7 C11 ? A 6XM 102 ? PLANAR . 15 8 C11 ? A 6XM 101 ? PLANAR . 16 8 C11 ? A 6XM 102 ? PLANAR . 17 9 C11 ? A 6XM 101 ? PLANAR . 18 9 C11 ? A 6XM 102 ? PLANAR . 19 10 C11 ? A 6XM 101 ? PLANAR . 20 10 C11 ? A 6XM 102 ? PLANAR . # _ndb_struct_conf_na.entry_id 5LIG _ndb_struct_conf_na.feature 'double helix' # _ndb_struct_na_base_pair.model_number 1 _ndb_struct_na_base_pair.i_label_asym_id A _ndb_struct_na_base_pair.i_label_comp_id DG _ndb_struct_na_base_pair.i_label_seq_id 3 _ndb_struct_na_base_pair.i_symmetry 1_555 _ndb_struct_na_base_pair.j_label_asym_id A _ndb_struct_na_base_pair.j_label_comp_id DG _ndb_struct_na_base_pair.j_label_seq_id 7 _ndb_struct_na_base_pair.j_symmetry 1_555 _ndb_struct_na_base_pair.shear 1.888 _ndb_struct_na_base_pair.stretch 3.240 _ndb_struct_na_base_pair.stagger 0.126 _ndb_struct_na_base_pair.buckle -9.673 _ndb_struct_na_base_pair.propeller 4.913 _ndb_struct_na_base_pair.opening -90.108 _ndb_struct_na_base_pair.pair_number 1 _ndb_struct_na_base_pair.pair_name A_DG3:DG7_A _ndb_struct_na_base_pair.i_auth_asym_id A _ndb_struct_na_base_pair.i_auth_seq_id 3 _ndb_struct_na_base_pair.i_PDB_ins_code ? _ndb_struct_na_base_pair.j_auth_asym_id A _ndb_struct_na_base_pair.j_auth_seq_id 7 _ndb_struct_na_base_pair.j_PDB_ins_code ? _ndb_struct_na_base_pair.hbond_type_28 6 _ndb_struct_na_base_pair.hbond_type_12 3 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Slovenian Research Agency' Slovenia P1-242 1 'Slovenian Research Agency' Slovenia J1-6733 2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name '8,12-bis(2-morpholinoethyl)-8H-benzo[ij]xantheno[1,9,8-cdef][2,7]naphthyridin-12-iumhexafluorophosphate' _pdbx_entity_nonpoly.comp_id 6XM #