HEADER TRANSFERASE 24-JUL-16 5LKT TITLE CRYSTAL STRUCTURE OF THE P300 ACETYLTRANSFERASE CATALYTIC CORE WITH TITLE 2 BUTYRYL-COENZYME A. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE ACETYLTRANSFERASE P300,HISTONE ACETYLTRANSFERASE COMPND 3 P300; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP RESIDUES 1043-1519,UNP RESIDUES 1581-1666; COMPND 6 SYNONYM: P300 HAT,E1A-ASSOCIATED PROTEIN P300,P300 HAT,E1A-ASSOCIATED COMPND 7 PROTEIN P300; COMPND 8 EC: 2.3.1.48,2.3.1.48; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: EP300, P300; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_COMMON: CABBAGE LOOPER; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS P300 ACETYLTRANSFERASE, BUTYRYL-COA, CHROMATIN MODIFICATION, KEYWDS 2 ACYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Z.KACZMARSKA,E.ORTEGA,J.A.MARQUEZ,D.PANNE REVDAT 4 10-JAN-24 5LKT 1 LINK ATOM REVDAT 3 28-DEC-16 5LKT 1 JRNL REVDAT 2 16-NOV-16 5LKT 1 JRNL REVDAT 1 02-NOV-16 5LKT 0 JRNL AUTH Z.KACZMARSKA,E.ORTEGA,A.GOUDARZI,H.HUANG,S.KIM,J.A.MARQUEZ, JRNL AUTH 2 Y.ZHAO,S.KHOCHBIN,D.PANNE JRNL TITL STRUCTURE OF P300 IN COMPLEX WITH ACYL-COA VARIANTS. JRNL REF NAT. CHEM. BIOL. V. 13 21 2017 JRNL REFN ESSN 1552-4469 JRNL PMID 27820805 JRNL DOI 10.1038/NCHEMBIO.2217 REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.01 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 47507 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2396 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3480 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.13 REMARK 3 BIN R VALUE (WORKING SET) : 0.2590 REMARK 3 BIN FREE R VALUE SET COUNT : 169 REMARK 3 BIN FREE R VALUE : 0.2540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4493 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 80 REMARK 3 SOLVENT ATOMS : 384 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 44.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 1.09000 REMARK 3 B33 (A**2) : -1.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.156 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.137 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.105 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.939 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4690 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4364 ; 0.006 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6337 ; 1.304 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10095 ; 0.921 ; 3.004 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 549 ; 5.611 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 225 ;32.963 ;23.511 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 810 ;13.072 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;13.798 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 666 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5165 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1089 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2202 ; 2.448 ; 4.287 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2201 ; 2.447 ; 4.285 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2746 ; 3.862 ; 6.411 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2747 ; 3.861 ; 6.414 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2488 ; 3.125 ; 4.570 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2489 ; 3.125 ; 4.570 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3591 ; 5.027 ; 6.710 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5535 ; 7.375 ;34.049 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5535 ; 7.374 ;34.050 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5LKT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-JUL-16. REMARK 100 THE DEPOSITION ID IS D_1200000869. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUL-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5-8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976250 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49903 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 50.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4BHW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS, PEG MME 2000, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 54.61500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 54.61500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 46.24000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 77.34500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 46.24000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 77.34500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 54.61500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 46.24000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 77.34500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 54.61500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 46.24000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 77.34500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2168 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1033 REMARK 465 ALA A 1034 REMARK 465 MET A 1035 REMARK 465 ALA A 1036 REMARK 465 GLY A 1037 REMARK 465 LYS A 1038 REMARK 465 ALA A 1039 REMARK 465 VAL A 1040 REMARK 465 PRO A 1041 REMARK 465 MET A 1042 REMARK 465 GLN A 1043 REMARK 465 SER A 1044 REMARK 465 LYS A 1045 REMARK 465 GLY A 1179 REMARK 465 LYS A 1180 REMARK 465 GLN A 1181 REMARK 465 LEU A 1182 REMARK 465 ASP A 1217 REMARK 465 ASP A 1218 REMARK 465 PRO A 1219 REMARK 465 SER A 1220 REMARK 465 GLN A 1221 REMARK 465 PRO A 1222 REMARK 465 GLN A 1663 REMARK 465 ASP A 1664 REMARK 465 ARG A 1665 REMARK 465 PHE A 1666 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A1082 CG CD OE1 NE2 REMARK 470 LEU A1083 CG CD1 CD2 REMARK 470 LEU A1084 CG CD1 CD2 REMARK 470 ILE A1208 CG1 CG2 CD1 REMARK 470 GLN A1209 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1807 O HOH A 2169 2.13 REMARK 500 O HOH A 2103 O HOH A 2146 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2128 O HOH A 2128 3554 0.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A1176 -168.70 -71.92 REMARK 500 ASP A1188 -20.66 72.59 REMARK 500 ARG A1197 -45.96 -132.71 REMARK 500 GLU A1249 -69.50 -91.69 REMARK 500 PHE A1288 50.61 -92.15 REMARK 500 HIS A1402 30.55 -75.07 REMARK 500 ILE A1447 -48.37 -131.06 REMARK 500 CYS A1450 79.52 64.69 REMARK 500 CYS A1621 96.25 -167.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2184 DISTANCE = 5.92 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1703 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1163 SG REMARK 620 2 CYS A1164 SG 123.6 REMARK 620 3 HIS A1255 ND1 107.3 95.0 REMARK 620 4 CYS A1258 SG 109.8 108.8 111.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1177 SG REMARK 620 2 CYS A1183 SG 105.0 REMARK 620 3 CYS A1201 SG 115.6 120.3 REMARK 620 4 CYS A1204 SG 73.4 158.0 78.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1702 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1247 SG REMARK 620 2 CYS A1250 SG 103.4 REMARK 620 3 CYS A1272 SG 116.2 115.9 REMARK 620 4 CYS A1275 SG 107.5 109.0 104.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1704 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1315 NE2 REMARK 620 2 HIS A1315 NE2 0.0 REMARK 620 3 CYS A1408 SG 68.5 68.5 REMARK 620 4 CYS A1408 SG 116.8 116.8 56.3 REMARK 620 5 CYS A1408 SG 68.5 68.5 0.0 56.3 REMARK 620 6 CYS A1408 SG 116.8 116.8 56.3 0.0 56.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 1704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BCO A 1705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 1708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue DMS A 1709 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BHW RELATED DB: PDB REMARK 900 4BHW CONTAINS THE SAME PROTEIN COMPLEXED WITH COA. DBREF 5LKT A 1043 1519 UNP Q09472 EP300_HUMAN 1043 1519 DBREF 5LKT A 1581 1666 UNP Q09472 EP300_HUMAN 1581 1666 SEQADV 5LKT GLY A 1033 UNP Q09472 EXPRESSION TAG SEQADV 5LKT ALA A 1034 UNP Q09472 EXPRESSION TAG SEQADV 5LKT MET A 1035 UNP Q09472 EXPRESSION TAG SEQADV 5LKT ALA A 1036 UNP Q09472 EXPRESSION TAG SEQADV 5LKT GLY A 1037 UNP Q09472 EXPRESSION TAG SEQADV 5LKT LYS A 1038 UNP Q09472 EXPRESSION TAG SEQADV 5LKT ALA A 1039 UNP Q09472 EXPRESSION TAG SEQADV 5LKT VAL A 1040 UNP Q09472 EXPRESSION TAG SEQADV 5LKT PRO A 1041 UNP Q09472 EXPRESSION TAG SEQADV 5LKT MET A 1042 UNP Q09472 EXPRESSION TAG SEQADV 5LKT PHE A 1467 UNP Q09472 TYR 1467 ENGINEERED MUTATION SEQADV 5LKT SER A 1520 UNP Q09472 LINKER SEQADV 5LKT GLY A 1521 UNP Q09472 LINKER SEQADV 5LKT GLY A 1522 UNP Q09472 LINKER SEQADV 5LKT SER A 1523 UNP Q09472 LINKER SEQADV 5LKT GLY A 1524 UNP Q09472 LINKER SEQRES 1 A 578 GLY ALA MET ALA GLY LYS ALA VAL PRO MET GLN SER LYS SEQRES 2 A 578 LYS LYS ILE PHE LYS PRO GLU GLU LEU ARG GLN ALA LEU SEQRES 3 A 578 MET PRO THR LEU GLU ALA LEU TYR ARG GLN ASP PRO GLU SEQRES 4 A 578 SER LEU PRO PHE ARG GLN PRO VAL ASP PRO GLN LEU LEU SEQRES 5 A 578 GLY ILE PRO ASP TYR PHE ASP ILE VAL LYS SER PRO MET SEQRES 6 A 578 ASP LEU SER THR ILE LYS ARG LYS LEU ASP THR GLY GLN SEQRES 7 A 578 TYR GLN GLU PRO TRP GLN TYR VAL ASP ASP ILE TRP LEU SEQRES 8 A 578 MET PHE ASN ASN ALA TRP LEU TYR ASN ARG LYS THR SER SEQRES 9 A 578 ARG VAL TYR LYS TYR CYS SER LYS LEU SER GLU VAL PHE SEQRES 10 A 578 GLU GLN GLU ILE ASP PRO VAL MET GLN SER LEU GLY TYR SEQRES 11 A 578 CYS CYS GLY ARG LYS LEU GLU PHE SER PRO GLN THR LEU SEQRES 12 A 578 CYS CYS TYR GLY LYS GLN LEU CYS THR ILE PRO ARG ASP SEQRES 13 A 578 ALA THR TYR TYR SER TYR GLN ASN ARG TYR HIS PHE CYS SEQRES 14 A 578 GLU LYS CYS PHE ASN GLU ILE GLN GLY GLU SER VAL SER SEQRES 15 A 578 LEU GLY ASP ASP PRO SER GLN PRO GLN THR THR ILE ASN SEQRES 16 A 578 LYS GLU GLN PHE SER LYS ARG LYS ASN ASP THR LEU ASP SEQRES 17 A 578 PRO GLU LEU PHE VAL GLU CYS THR GLU CYS GLY ARG LYS SEQRES 18 A 578 MET HIS GLN ILE CYS VAL LEU HIS HIS GLU ILE ILE TRP SEQRES 19 A 578 PRO ALA GLY PHE VAL CYS ASP GLY CYS LEU LYS LYS SER SEQRES 20 A 578 ALA ARG THR ARG LYS GLU ASN LYS PHE SER ALA LYS ARG SEQRES 21 A 578 LEU PRO SER THR ARG LEU GLY THR PHE LEU GLU ASN ARG SEQRES 22 A 578 VAL ASN ASP PHE LEU ARG ARG GLN ASN HIS PRO GLU SER SEQRES 23 A 578 GLY GLU VAL THR VAL ARG VAL VAL HIS ALA SER ASP LYS SEQRES 24 A 578 THR VAL GLU VAL LYS PRO GLY MET LYS ALA ARG PHE VAL SEQRES 25 A 578 ASP SER GLY GLU MET ALA GLU SER PHE PRO TYR ARG THR SEQRES 26 A 578 LYS ALA LEU PHE ALA PHE GLU GLU ILE ASP GLY VAL ASP SEQRES 27 A 578 LEU CYS PHE PHE GLY MET HIS VAL GLN GLU TYR GLY SER SEQRES 28 A 578 ASP CYS PRO PRO PRO ASN GLN ARG ARG VAL TYR ILE SER SEQRES 29 A 578 TYR LEU ASP SER VAL HIS PHE PHE ARG PRO LYS CYS LEU SEQRES 30 A 578 ARG THR ALA VAL TYR HIS GLU ILE LEU ILE GLY TYR LEU SEQRES 31 A 578 GLU TYR VAL LYS LYS LEU GLY TYR THR THR GLY HIS ILE SEQRES 32 A 578 TRP ALA CYS PRO PRO SER GLU GLY ASP ASP TYR ILE PHE SEQRES 33 A 578 HIS CYS HIS PRO PRO ASP GLN LYS ILE PRO LYS PRO LYS SEQRES 34 A 578 ARG LEU GLN GLU TRP PHE LYS LYS MET LEU ASP LYS ALA SEQRES 35 A 578 VAL SER GLU ARG ILE VAL HIS ASP TYR LYS ASP ILE PHE SEQRES 36 A 578 LYS GLN ALA THR GLU ASP ARG LEU THR SER ALA LYS GLU SEQRES 37 A 578 LEU PRO TYR PHE GLU GLY ASP PHE TRP PRO ASN VAL LEU SEQRES 38 A 578 GLU GLU SER ILE LYS GLU SER GLY GLY SER GLY SER GLN SEQRES 39 A 578 LYS LEU TYR ALA THR MET GLU LYS HIS LYS GLU VAL PHE SEQRES 40 A 578 PHE VAL ILE ARG LEU ILE ALA GLY PRO ALA ALA ASN SER SEQRES 41 A 578 LEU PRO PRO ILE VAL ASP PRO ASP PRO LEU ILE PRO CYS SEQRES 42 A 578 ASP LEU MET ASP GLY ARG ASP ALA PHE LEU THR LEU ALA SEQRES 43 A 578 ARG ASP LYS HIS LEU GLU PHE SER SER LEU ARG ARG ALA SEQRES 44 A 578 GLN TRP SER THR MET CYS MET LEU VAL GLU LEU HIS THR SEQRES 45 A 578 GLN SER GLN ASP ARG PHE HET ZN A1701 1 HET ZN A1702 1 HET ZN A1703 1 HET ZN A1704 1 HET BCO A1705 53 HET GOL A1706 6 HET GOL A1707 6 HET GOL A1708 6 HET DMS A1709 4 HET CL A1710 1 HETNAM ZN ZINC ION HETNAM BCO BUTYRYL COENZYME A HETNAM GOL GLYCEROL HETNAM DMS DIMETHYL SULFOXIDE HETNAM CL CHLORIDE ION HETSYN BCO S-{(3S,5S,9R)-1-[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9- HETSYN 2 BCO YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]-3, HETSYN 3 BCO 5,9-TRIHYDROXY-8,8-DIMETHYL-3,5-DIOXIDO-10,14-DIOXO-2, HETSYN 4 BCO 4,6-TRIOXA-11,15-DIAZA-3LAMBDA~5~,5LAMBDA~5~- HETSYN 5 BCO DIPHOSPHAHEPTADECAN-17-YL} BUTANETHIOATE (NON- HETSYN 6 BCO PREFERRED NAME) HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN 4(ZN 2+) FORMUL 6 BCO C25 H42 N7 O17 P3 S FORMUL 7 GOL 3(C3 H8 O3) FORMUL 10 DMS C2 H6 O S FORMUL 11 CL CL 1- FORMUL 12 HOH *384(H2 O) HELIX 1 AA1 LYS A 1050 ARG A 1067 1 18 HELIX 2 AA2 SER A 1072 ARG A 1076 5 5 HELIX 3 AA3 ASP A 1088 VAL A 1093 1 6 HELIX 4 AA4 ASP A 1098 THR A 1108 1 11 HELIX 5 AA5 GLU A 1113 ASN A 1132 1 20 HELIX 6 AA6 SER A 1136 LEU A 1160 1 25 HELIX 7 AA7 GLU A 1202 ILE A 1208 1 7 HELIX 8 AA8 GLU A 1229 PHE A 1231 5 3 HELIX 9 AA9 GLN A 1256 LEU A 1260 1 5 HELIX 10 AB1 CYS A 1272 SER A 1279 1 8 HELIX 11 AB2 THR A 1296 ASN A 1314 1 19 HELIX 12 AB3 LYS A 1336 VAL A 1344 1 9 HELIX 13 AB4 PRO A 1406 CYS A 1408 5 3 HELIX 14 AB5 LEU A 1409 GLY A 1429 1 21 HELIX 15 AB6 LYS A 1459 GLU A 1477 1 19 HELIX 16 AB7 ILE A 1486 ASP A 1493 1 8 HELIX 17 AB8 SER A 1497 LEU A 1501 5 5 HELIX 18 AB9 ASP A 1507 SER A 1520 1 14 HELIX 19 AC1 LYS A 1583 HIS A 1591 1 9 HELIX 20 AC2 ALA A 1602 SER A 1608 5 7 HELIX 21 AC3 CYS A 1621 ASP A 1625 5 5 HELIX 22 AC4 ARG A 1627 LYS A 1637 1 11 HELIX 23 AC5 SER A 1643 SER A 1662 1 20 SHEET 1 AA1 2 LEU A1175 CYS A1176 0 SHEET 2 AA1 2 THR A1184 ILE A1185 -1 O ILE A1185 N LEU A1175 SHEET 1 AA2 3 TYR A1198 CYS A1201 0 SHEET 2 AA2 3 THR A1190 TYR A1194 -1 N TYR A1192 O PHE A1200 SHEET 3 AA2 3 SER A1232 LYS A1235 -1 O SER A1232 N SER A1193 SHEET 1 AA3 2 SER A1212 LEU A1215 0 SHEET 2 AA3 2 THR A1224 ASN A1227 -1 O ILE A1226 N VAL A1213 SHEET 1 AA4 2 PHE A1244 GLU A1246 0 SHEET 2 AA4 2 LYS A1253 HIS A1255 -1 O MET A1254 N VAL A1245 SHEET 1 AA5 7 VAL A1321 GLU A1334 0 SHEET 2 AA5 7 SER A1352 ILE A1366 -1 O TYR A1355 N LYS A1331 SHEET 3 AA5 7 VAL A1369 TYR A1381 -1 O VAL A1369 N ILE A1366 SHEET 4 AA5 7 ARG A1392 SER A1400 -1 O ARG A1392 N TYR A1381 SHEET 5 AA5 7 THR A1432 TRP A1436 1 O THR A1432 N VAL A1393 SHEET 6 AA5 7 PHE A1595 ARG A1599 -1 O ILE A1598 N GLY A1433 SHEET 7 AA5 7 ASP A1482 ASP A1485 -1 N LYS A1484 O VAL A1597 SSBOND 1 CYS A 1201 CYS A 1204 1555 1555 2.89 SSBOND 2 CYS A 1408 CYS A 1408 1555 3554 2.48 LINK SG CYS A1163 ZN ZN A1703 1555 1555 2.30 LINK SG CYS A1164 ZN ZN A1703 1555 1555 2.24 LINK SG CYS A1177 ZN ZN A1701 1555 1555 2.81 LINK SG CYS A1183 ZN ZN A1701 1555 1555 2.08 LINK SG CYS A1201 ZN ZN A1701 1555 1555 2.24 LINK SG CYS A1204 ZN ZN A1701 1555 1555 2.34 LINK SG CYS A1247 ZN ZN A1702 1555 1555 2.40 LINK SG CYS A1250 ZN ZN A1702 1555 1555 2.27 LINK ND1 HIS A1255 ZN ZN A1703 1555 1555 2.12 LINK SG CYS A1258 ZN ZN A1703 1555 1555 2.43 LINK SG CYS A1272 ZN ZN A1702 1555 1555 2.36 LINK SG CYS A1275 ZN ZN A1702 1555 1555 2.33 LINK NE2 HIS A1315 ZN ZN A1704 1555 1555 2.53 LINK NE2 HIS A1315 ZN ZN A1704 1555 3554 1.73 LINK SG ACYS A1408 ZN ZN A1704 1555 1555 2.86 LINK SG BCYS A1408 ZN ZN A1704 1555 1555 2.33 LINK SG ACYS A1408 ZN ZN A1704 1555 3554 2.22 LINK SG BCYS A1408 ZN ZN A1704 1555 3554 2.47 CISPEP 1 ASP A 1069 PRO A 1070 0 1.37 CISPEP 2 PRO A 1387 PRO A 1388 0 5.44 CISPEP 3 ARG A 1405 PRO A 1406 0 1.56 SITE 1 AC1 4 CYS A1177 CYS A1183 CYS A1201 CYS A1204 SITE 1 AC2 4 CYS A1247 CYS A1250 CYS A1272 CYS A1275 SITE 1 AC3 4 CYS A1163 CYS A1164 HIS A1255 CYS A1258 SITE 1 AC4 2 HIS A1315 CYS A1408 SITE 1 AC5 27 SER A1396 TYR A1397 LEU A1398 ASP A1399 SITE 2 AC5 27 SER A1400 LYS A1407 ARG A1410 THR A1411 SITE 3 AC5 27 TYR A1414 TRP A1436 CYS A1438 PRO A1440 SITE 4 AC5 27 TYR A1446 LYS A1456 ILE A1457 PRO A1458 SITE 5 AC5 27 ARG A1462 TRP A1466 HOH A1819 HOH A1857 SITE 6 AC5 27 HOH A1875 HOH A1887 HOH A1890 HOH A1904 SITE 7 AC5 27 HOH A1922 HOH A1984 HOH A2004 SITE 1 AC6 7 ILE A1092 VAL A1093 LYS A1094 SER A1095 SITE 2 AC6 7 ASN A1127 LEU A1130 GLY A1347 SITE 1 AC7 8 LYS A1331 TYR A1355 THR A1357 VAL A1378 SITE 2 AC7 8 GLN A1379 SER A1396 TYR A1397 HOH A1821 SITE 1 AC8 6 GLU A1320 THR A1322 PHE A1363 GLU A1364 SITE 2 AC8 6 ASP A1370 HOH A2021 SITE 1 AC9 5 HIS A1434 ASP A1507 PHE A1595 PHE A1596 SITE 2 AC9 5 HOH A1933 CRYST1 92.480 154.690 109.230 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010813 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006465 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009155 0.00000