HEADER TRANSFERASE 18-SEP-16 5LWN TITLE CRYSTAL STRUCTURE OF JAK3 IN COMPLEX WITH COMPOUND 5 (FM409) COMPND MOL_ID: 1; COMPND 2 MOLECULE: TYROSINE-PROTEIN KINASE JAK3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: JANUS KINASE 3,JAK-3,LEUKOCYTE JANUS KINASE,L-JAK; COMPND 5 EC: 2.7.10.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: JAK3; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS TRANSFERASE, JAK3, COVALENT INHIBITOR, REVERSIBLE COVALENT INHIBITOR, KEYWDS 2 INDUCED POCKET, ARGININE POCKET, STRUCTURAL GENOMICS, STRUCTURAL KEYWDS 3 GENOMICS CONSORTIUM, SGC EXPDTA X-RAY DIFFRACTION AUTHOR A.CHAIKUAD,M.FORSTER,S.MUKHOPADHYAY,K.KUPINSKA,K.ELLIS,P.MAHAJAN, AUTHOR 2 N.BURGESS-BROWN,A.M.EDWARDS,C.H.ARROWSMITH,C.BOUNTRA,S.A.LAUFER, AUTHOR 3 S.KNAPP,STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 2 30-NOV-16 5LWN 1 JRNL REVDAT 1 26-OCT-16 5LWN 0 JRNL AUTH M.FORSTER,A.CHAIKUAD,S.M.BAUER,J.HOLSTEIN,M.B.ROBERS, JRNL AUTH 2 C.R.CORONA,M.GEHRINGER,E.PFAFFENROT,K.GHORESCHI,S.KNAPP, JRNL AUTH 3 S.A.LAUFER JRNL TITL SELECTIVE JAK3 INHIBITORS WITH A COVALENT REVERSIBLE BINDING JRNL TITL 2 MODE TARGETING A NEW INDUCED FIT BINDING POCKET. JRNL REF CELL CHEM BIOL V. 23 1335 2016 JRNL REFN ESSN 2451-9456 JRNL PMID 27840070 JRNL DOI 10.1016/J.CHEMBIOL.2016.10.008 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 51.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 33138 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1839 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2422 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3080 REMARK 3 BIN FREE R VALUE SET COUNT : 161 REMARK 3 BIN FREE R VALUE : 0.3060 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2306 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 194 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.67000 REMARK 3 B22 (A**2) : 0.66000 REMARK 3 B33 (A**2) : -0.04000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.63000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.093 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.510 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2520 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2397 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3414 ; 1.616 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5516 ; 0.971 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 305 ; 5.753 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 115 ;34.618 ;22.609 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 419 ;12.393 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;15.880 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 354 ; 0.107 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3108 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 599 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1177 ; 1.382 ; 1.626 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1174 ; 1.378 ; 1.624 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1473 ; 2.431 ; 2.430 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1473 ; 2.431 ; 2.430 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1343 ; 1.735 ; 1.853 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1344 ; 1.734 ; 1.853 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1934 ; 2.743 ; 2.675 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2905 ; 6.851 ;13.928 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2895 ; 6.858 ;13.891 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 814 A 891 REMARK 3 ORIGIN FOR THE GROUP (A): 17.1750 21.8420 38.6440 REMARK 3 T TENSOR REMARK 3 T11: 0.0151 T22: 0.2329 REMARK 3 T33: 0.1604 T12: 0.0203 REMARK 3 T13: -0.0093 T23: -0.0600 REMARK 3 L TENSOR REMARK 3 L11: 2.2865 L22: 0.3694 REMARK 3 L33: 2.9014 L12: 0.8853 REMARK 3 L13: 0.9498 L23: 0.1739 REMARK 3 S TENSOR REMARK 3 S11: 0.1353 S12: -0.2036 S13: 0.2353 REMARK 3 S21: 0.0541 S22: -0.0500 S23: 0.0855 REMARK 3 S31: 0.1258 S32: 0.1294 S33: -0.0852 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 892 A 1103 REMARK 3 ORIGIN FOR THE GROUP (A): 6.1250 19.8080 17.2920 REMARK 3 T TENSOR REMARK 3 T11: 0.0216 T22: 0.1717 REMARK 3 T33: 0.1307 T12: 0.0129 REMARK 3 T13: -0.0116 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.4114 L22: 0.3536 REMARK 3 L33: 0.7184 L12: -0.1779 REMARK 3 L13: 0.1448 L23: -0.0318 REMARK 3 S TENSOR REMARK 3 S11: 0.0203 S12: 0.0449 S13: 0.0363 REMARK 3 S21: -0.0296 S22: -0.0047 S23: -0.0094 REMARK 3 S31: 0.0309 S32: 0.0177 S33: -0.0156 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5LWN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001487. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.5-6.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35006 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 62.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.08200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.68000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.01 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18-25% PEG 3350, 0.1-0.2 M MGCL2 AND REMARK 280 0.1 M MES, PH 5.5-6.1, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 31.28500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 810 REMARK 465 MET A 811 REMARK 465 GLN A 812 REMARK 465 ASP A 813 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 895 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 896 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 870 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 870 NE - CZ - NH2 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 887 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 944 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 948 -46.25 75.64 REMARK 500 ALA A 966 -162.36 -129.49 REMARK 500 ASP A 967 73.73 48.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PHU A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1204 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1205 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1206 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 1207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 79R A 1208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 79S A 1209 DBREF 5LWN A 812 1103 UNP P52333 JAK3_HUMAN 812 1103 SEQADV 5LWN SER A 810 UNP P52333 EXPRESSION TAG SEQADV 5LWN MET A 811 UNP P52333 EXPRESSION TAG SEQADV 5LWN ALA A 949 UNP P52333 ASP 949 CONFLICT SEQADV 5LWN SER A 1040 UNP P52333 CYS 1040 CONFLICT SEQADV 5LWN SER A 1048 UNP P52333 CYS 1048 CONFLICT SEQRES 1 A 294 SER MET GLN ASP PRO THR ILE PHE GLU GLU ARG HIS LEU SEQRES 2 A 294 LYS TYR ILE SER GLN LEU GLY LYS GLY ASN PHE GLY SER SEQRES 3 A 294 VAL GLU LEU CYS ARG TYR ASP PRO LEU GLY ASP ASN THR SEQRES 4 A 294 GLY ALA LEU VAL ALA VAL LYS GLN LEU GLN HIS SER GLY SEQRES 5 A 294 PRO ASP GLN GLN ARG ASP PHE GLN ARG GLU ILE GLN ILE SEQRES 6 A 294 LEU LYS ALA LEU HIS SER ASP PHE ILE VAL LYS TYR ARG SEQRES 7 A 294 GLY VAL SER TYR GLY PRO GLY ARG GLN SER LEU ARG LEU SEQRES 8 A 294 VAL MET GLU TYR LEU PRO SER GLY CYS LEU ARG ASP PHE SEQRES 9 A 294 LEU GLN ARG HIS ARG ALA ARG LEU ASP ALA SER ARG LEU SEQRES 10 A 294 LEU LEU TYR SER SER GLN ILE CYS LYS GLY MET GLU TYR SEQRES 11 A 294 LEU GLY SER ARG ARG CYS VAL HIS ARG ALA LEU ALA ALA SEQRES 12 A 294 ARG ASN ILE LEU VAL GLU SER GLU ALA HIS VAL LYS ILE SEQRES 13 A 294 ALA ASP PHE GLY LEU ALA LYS LEU LEU PRO LEU ASP LYS SEQRES 14 A 294 ASP TYR TYR VAL VAL ARG GLU PRO GLY GLN SER PRO ILE SEQRES 15 A 294 PHE TRP TYR ALA PRO GLU SER LEU SER ASP ASN ILE PHE SEQRES 16 A 294 SER ARG GLN SER ASP VAL TRP SER PHE GLY VAL VAL LEU SEQRES 17 A 294 TYR GLU LEU PHE THR TYR CYS ASP LYS SER CYS SER PRO SEQRES 18 A 294 SER ALA GLU PHE LEU ARG MET MET GLY SER GLU ARG ASP SEQRES 19 A 294 VAL PRO ALA LEU SER ARG LEU LEU GLU LEU LEU GLU GLU SEQRES 20 A 294 GLY GLN ARG LEU PRO ALA PRO PRO ALA CYS PRO ALA GLU SEQRES 21 A 294 VAL HIS GLU LEU MET LYS LEU CYS TRP ALA PRO SER PRO SEQRES 22 A 294 GLN ASP ARG PRO SER PHE SER ALA LEU GLY PRO GLN LEU SEQRES 23 A 294 ASP MET LEU TRP SER GLY SER ARG HET PHU A1201 10 HET EDO A1202 4 HET EDO A1203 4 HET EDO A1204 4 HET EDO A1205 4 HET EDO A1206 4 HET EDO A1207 4 HET 79R A1208 33 HET 79S A1209 33 HETNAM PHU 1-PHENYLUREA HETNAM EDO 1,2-ETHANEDIOL HETNAM 79R (~{Z})-2-CYANO-~{N},~{N}-DIMETHYL-3-[5-[3-[(1~{S}, HETNAM 2 79R 2~{R})-2-METHYLCYCLOHEXYL]-3,5,8,10- HETNAM 3 79R TETRAZATRICYCLO[7.3.0.0^{2,6}]DODECA-1,4,6,8,11- HETNAM 4 79R PENTAEN-4-YL]FURAN-2-YL]PROP-2-ENAMIDE HETNAM 79S (2~{S})-2-CYANO-~{N},~{N}-DIMETHYL-3-[5-[3-[(1~{S}, HETNAM 2 79S 2~{R})-2-METHYLCYCLOHEXYL]-3,5,8,10- HETNAM 3 79S TETRAZATRICYCLO[7.3.0.0^{2,6}]DODECA-1,4,6,8,11- HETNAM 4 79S PENTAEN-4-YL]FURAN-2-YL]PROPANAMIDE HETSYN PHU PHENYLUREA HETSYN EDO ETHYLENE GLYCOL FORMUL 2 PHU C7 H8 N2 O FORMUL 3 EDO 6(C2 H6 O2) FORMUL 9 79R C25 H26 N6 O2 FORMUL 10 79S C25 H28 N6 O2 FORMUL 11 HOH *194(H2 O) HELIX 1 AA1 GLY A 861 LEU A 878 1 18 HELIX 2 AA2 CYS A 909 ARG A 918 1 10 HELIX 3 AA3 ALA A 919 LEU A 921 5 3 HELIX 4 AA4 ASP A 922 ARG A 943 1 22 HELIX 5 AA5 ALA A 951 ARG A 953 5 3 HELIX 6 AA6 PRO A 990 TYR A 994 5 5 HELIX 7 AA7 ALA A 995 ASN A 1002 1 8 HELIX 8 AA8 ARG A 1006 THR A 1022 1 17 HELIX 9 AA9 ASP A 1025 CYS A 1028 5 4 HELIX 10 AB1 SER A 1029 MET A 1038 1 10 HELIX 11 AB2 PRO A 1045 GLU A 1056 1 12 HELIX 12 AB3 PRO A 1067 TRP A 1078 1 12 HELIX 13 AB4 SER A 1081 ARG A 1085 5 5 HELIX 14 AB5 SER A 1087 SER A 1102 1 16 SHEET 1 AA1 6 ILE A 816 GLU A 818 0 SHEET 2 AA1 6 TYR A 886 TYR A 891 1 O VAL A 889 N PHE A 817 SHEET 3 AA1 6 LEU A 898 GLU A 903 -1 O VAL A 901 N ARG A 887 SHEET 4 AA1 6 ALA A 850 LEU A 857 -1 N ALA A 853 O MET A 902 SHEET 5 AA1 6 GLY A 834 TYR A 841 -1 N TYR A 841 O ALA A 850 SHEET 6 AA1 6 LEU A 822 LYS A 830 -1 N LEU A 828 O VAL A 836 SHEET 1 AA2 2 CYS A 945 VAL A 946 0 SHEET 2 AA2 2 LYS A 972 LEU A 973 -1 O LYS A 972 N VAL A 946 SHEET 1 AA3 2 ILE A 955 SER A 959 0 SHEET 2 AA3 2 HIS A 962 ILE A 965 -1 O LYS A 964 N LEU A 956 SHEET 1 AA4 2 TYR A 980 VAL A 982 0 SHEET 2 AA4 2 ILE A1003 SER A1005 -1 O PHE A1004 N TYR A 981 LINK SG BCYS A 909 C12B79S A1209 1555 1555 1.66 SITE 1 AC1 6 TRP A1011 PRO A1030 ARG A1059 LEU A1060 SITE 2 AC1 6 TRP A1078 HOH A1352 SITE 1 AC2 6 ASP A 846 THR A 848 ASP A 863 ARG A 866 SITE 2 AC2 6 ASP A 867 ARG A 870 SITE 1 AC3 8 GLY A 831 VAL A 836 LYS A 855 79R A1208 SITE 2 AC3 8 79S A1209 HOH A1345 HOH A1353 HOH A1375 SITE 1 AC4 5 SER A 924 ARG A 925 LEU A 928 TRP A1099 SITE 2 AC4 5 HOH A1331 SITE 1 AC5 8 HIS A 917 ARG A 920 PRO A 996 LEU A1054 SITE 2 AC5 8 GLU A1055 ARG A1059 PRO A1080 HOH A1393 SITE 1 AC6 5 ASP A 979 GLN A1007 GLN A1083 HOH A1317 SITE 2 AC6 5 HOH A1482 SITE 1 AC7 7 ARG A 911 GLU A1019 CYS A1024 ASP A1025 SITE 2 AC7 7 SER A1029 HOH A1306 HOH A1309 SITE 1 AC8 13 LEU A 828 ALA A 853 GLU A 903 TYR A 904 SITE 2 AC8 13 LEU A 905 CYS A 909 ARG A 911 ASP A 912 SITE 3 AC8 13 ARG A 953 LEU A 956 EDO A1203 79S A1209 SITE 4 AC8 13 HOH A1409 SITE 1 AC9 14 LEU A 828 ALA A 853 GLU A 903 TYR A 904 SITE 2 AC9 14 LEU A 905 CYS A 909 ARG A 911 ASP A 912 SITE 3 AC9 14 ARG A 953 LEU A 956 EDO A1203 79R A1208 SITE 4 AC9 14 HOH A1407 HOH A1409 CRYST1 42.049 62.570 51.080 90.00 92.55 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023781 0.000000 0.001059 0.00000 SCALE2 0.000000 0.015982 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019597 0.00000