HEADER OXIDOREDUCTASE 19-SEP-16 5LWX TITLE CRYSTAL STRUCTURE OF THE H253D MUTANT OF MCOG FROM ASPERGILLUS NIGER COMPND MOL_ID: 1; COMPND 2 MOLECULE: MULTICOPPER OXIDASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.10.3.2; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS NIGER; SOURCE 3 ORGANISM_TAXID: 5061; SOURCE 4 GENE: AN08G08450; SOURCE 5 EXPRESSION_SYSTEM: ASPERGILLUS NIGER; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 5061; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: N593; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PALIV KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR M.FERRARONI,F.BRIGANTI,J.A.TAMAYO-RAMOS,W.J.H.VAN BERKEL,A.H.WESTPHAL REVDAT 5 17-JAN-24 5LWX 1 HETSYN REVDAT 4 29-JUL-20 5LWX 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 19-JUL-17 5LWX 1 REVDAT 2 17-MAY-17 5LWX 1 JRNL REVDAT 1 03-MAY-17 5LWX 0 JRNL AUTH M.FERRARONI,A.H.WESTPHAL,M.BORSARI,J.A.TAMAYO-RAMOS, JRNL AUTH 2 F.BRIGANTI,L.H.DE GRAAFF,W.J.H.VAN BERKEL JRNL TITL STRUCTURE AND FUNCTION OF ASPERGILLUS NIGER LACCASE MCOG JRNL REF BIOCATALYSIS 2017 JRNL REFN ESSN 2353-1746 JRNL DOI 10.1515/BOCA-2017-0001 REMARK 2 REMARK 2 RESOLUTION. 1.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 96750 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5081 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.49 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.53 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6002 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 82.88 REMARK 3 BIN R VALUE (WORKING SET) : 0.4330 REMARK 3 BIN FREE R VALUE SET COUNT : 308 REMARK 3 BIN FREE R VALUE : 0.4230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4374 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 176 REMARK 3 SOLVENT ATOMS : 597 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.25 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.73000 REMARK 3 B22 (A**2) : 1.85000 REMARK 3 B33 (A**2) : -0.18000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.35000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.068 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.069 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.275 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.973 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.967 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4716 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6471 ; 1.307 ; 1.904 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 563 ; 6.975 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 237 ;36.354 ;24.768 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 634 ;11.108 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;13.526 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 713 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3691 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2225 ; 1.503 ; 3.027 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2782 ; 2.113 ; 4.533 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2491 ; 2.121 ; 3.315 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7860 ; 5.993 ;28.174 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LWX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001499. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALBA REMARK 200 BEAMLINE : XALOC REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.951 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 101840 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.490 REMARK 200 RESOLUTION RANGE LOW (A) : 29.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 91.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.98700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.970 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: 5LM8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2 M NACL, 0.1 M SODIUM REMARK 280 CITRATE, PH 5.5, VAPOR DIFFUSION, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 100.13650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.24900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 100.13650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.24900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4300 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1156 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 1 REMARK 465 PRO A 2 REMARK 465 ILE A 3 REMARK 465 ARG A 4 REMARK 465 HIS A 5 REMARK 465 VAL A 6 REMARK 465 THR A 7 REMARK 465 PRO A 8 REMARK 465 HIS A 9 REMARK 465 LEU A 10 REMARK 465 SER A 11 REMARK 465 HIS A 12 REMARK 465 SER A 13 REMARK 465 THR A 14 REMARK 465 PRO A 15 REMARK 465 ILE A 16 REMARK 465 PRO A 17 REMARK 465 ARG A 18 REMARK 465 ASP A 19 REMARK 465 MET A 20 REMARK 465 GLN A 21 REMARK 465 GLY A 22 REMARK 465 ASN A 23 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 24 OG REMARK 470 SER A 25 OG REMARK 470 GLN A 192 CD OE1 NE2 REMARK 470 GLN A 227 CG CD OE1 NE2 REMARK 470 ASN A 335 CG OD1 ND2 REMARK 470 MET A 374 CG SD CE REMARK 470 GLN A 470 CG CD OE1 NE2 REMARK 470 GLU A 493 CG CD OE1 OE2 REMARK 470 GLU A 543 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CU CU A 601 O1 PER A 618 1.44 REMARK 500 OD1 ASN A 103 C1 NAG B 1 1.61 REMARK 500 ND2 ASN A 60 C1 NAG A 605 1.62 REMARK 500 ND2 ASN A 400 C1 NAG A 608 1.66 REMARK 500 O4 NAG B 2 C1 BMA A 606 1.67 REMARK 500 O4 NAG A 605 C1 NAG A 607 1.69 REMARK 500 O4 NAG C 2 C1 BMA A 616 1.79 REMARK 500 O HOH A 701 O HOH A 719 1.84 REMARK 500 NE2 HIS A 328 O HOH A 701 2.07 REMARK 500 O3 BMA A 606 C1 MAN A 613 2.08 REMARK 500 O HOH A 945 O HOH A 962 2.12 REMARK 500 OD1 ASP A 334 O HOH A 701 2.13 REMARK 500 CE LYS A 558 O HOH A 959 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 117 32.61 -144.72 REMARK 500 ALA A 125 -11.86 80.15 REMARK 500 SER A 149 -146.23 -156.31 REMARK 500 SER A 156 -130.96 47.98 REMARK 500 THR A 212 -157.54 -161.25 REMARK 500 ASP A 253 57.69 -155.56 REMARK 500 ASN A 262 -1.47 67.70 REMARK 500 ASP A 271 -131.60 51.08 REMARK 500 ILE A 349 -68.77 -100.16 REMARK 500 ASN A 433 -0.01 72.20 REMARK 500 ASN A 478 60.51 32.72 REMARK 500 ARG A 482 -174.27 -171.73 REMARK 500 ALA A 568 -165.26 -100.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG B 1 REMARK 610 NAG A 605 REMARK 610 BMA A 606 REMARK 610 NAG A 607 REMARK 610 NAG A 608 REMARK 610 MAN A 613 REMARK 610 NAG A 614 REMARK 610 NAG A 615 REMARK 610 BMA A 616 REMARK 610 MAN A 617 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 603 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 108 NE2 REMARK 620 2 HIS A 451 NE2 179.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 601 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 110 ND1 REMARK 620 2 HIS A 152 NE2 138.4 REMARK 620 3 HIS A 517 NE2 108.2 109.0 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 602 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 154 NE2 REMARK 620 2 HIS A 453 NE2 108.6 REMARK 620 3 HIS A 515 NE2 118.9 115.3 REMARK 620 4 PER A 618 O2 94.0 116.4 101.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU A 604 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 448 ND1 REMARK 620 2 CYS A 516 SG 124.0 REMARK 620 3 HIS A 521 ND1 103.9 131.7 REMARK 620 N 1 2 DBREF 5LWX A 1 577 UNP A2QS62 A2QS62_ASPNC 18 594 SEQADV 5LWX ASP A 253 UNP A2QS62 HIS 270 ENGINEERED MUTATION SEQRES 1 A 577 SER PRO ILE ARG HIS VAL THR PRO HIS LEU SER HIS SER SEQRES 2 A 577 THR PRO ILE PRO ARG ASP MET GLN GLY ASN SER SER GLN SEQRES 3 A 577 SER PRO ASN THR PRO TRP GLN GLY TYR ASP ILE ASN THR SEQRES 4 A 577 ASN TYR TYR GLU THR ILE PRO GLN THR ASN VAL VAL ARG SEQRES 5 A 577 GLU TYR TRP PHE ASP ILE VAL ASN THR THR ALA ALA LEU SEQRES 6 A 577 ASP GLY VAL GLU ARG PRO VAL LEU LEU VAL ASN GLY GLN SEQRES 7 A 577 PHE PRO GLY PRO THR ILE GLU ALA ASN TRP GLY ASP THR SEQRES 8 A 577 VAL LYS VAL HIS VAL THR ASN ARG MET GLU ASN ASN GLY SEQRES 9 A 577 THR ALA ILE HIS PHE HIS GLY ILE ARG GLN LEU TYR ASN SEQRES 10 A 577 ASN GLN MET ASP GLY VAL ALA ALA LEU THR GLN CYS PRO SEQRES 11 A 577 VAL PRO PRO ASN SER SER TYR THR TYR VAL TRP ARG ALA SEQRES 12 A 577 GLU GLU TYR GLY SER SER TRP TYR HIS SER HIS PHE SER SEQRES 13 A 577 LEU GLN ALA TRP GLU GLY VAL PHE GLY GLY ILE LEU ILE SEQRES 14 A 577 HIS GLY PRO SER THR ALA GLU TYR ASP HIS ASP LEU GLY SEQRES 15 A 577 MET VAL PHE LEU ASN ASP TRP SER HIS GLN THR VAL ASP SEQRES 16 A 577 GLU MET TYR GLN SER VAL LEU GLU SER GLN ASN PRO PRO SEQRES 17 A 577 HIS PHE GLN THR GLY LEU ILE ASN GLY SER ASN ILE TRP SEQRES 18 A 577 VAL THR ALA ASP ASN GLN THR VAL GLY ARG ARG PHE GLN SEQRES 19 A 577 THR GLU PHE VAL PRO GLY GLN ARG TYR ARG LEU ARG LEU SEQRES 20 A 577 VAL ASN ALA ALA MET ASP THR HIS PHE ARG PHE SER ILE SEQRES 21 A 577 ASP ASN HIS ASP LEU THR VAL ILE ALA SER ASP PHE VAL SEQRES 22 A 577 PRO ILE VAL PRO PHE THR THR ASN ASN VAL PRO ILE GLY SEQRES 23 A 577 MET GLY GLN ARG TYR ASP ILE ILE VAL THR ALA ASN GLN SEQRES 24 A 577 ALA PRO ASP ASN TYR TRP ILE ARG ALA ILE PRO GLN SER SEQRES 25 A 577 PHE CYS SER ASP ASN ALA ASN SER ASP ASN ILE LYS GLY SEQRES 26 A 577 VAL LEU HIS TYR GLU GLY ALA ALA ASP ASN SER ASP PRO SEQRES 27 A 577 THR SER THR LYS TRP ASP TYR GLY ASP ASP ILE GLN CYS SEQRES 28 A 577 LEU ASP PHE SER LEU ASP GLU LEU VAL PRO TRP LEU ALA SEQRES 29 A 577 LEU ASP ALA ASP ILE GLY GLY ALA GLN MET ALA GLU SER SEQRES 30 A 577 ASP VAL ASP PHE THR PRO PHE GLY ASP VAL PRO LEU TYR SEQRES 31 A 577 LEU TRP THR MET GLY GLY ASN ALA LEU ASN ILE SER TRP SEQRES 32 A 577 LYS ASP PRO THR LEU GLN GLN THR PHE GLU ASP PRO ASP SEQRES 33 A 577 LYS MET ASP TRP LYS ALA SER GLN GLY VAL ILE GLU ALA SEQRES 34 A 577 ALA ILE PRO ASN LYS TRP THR VAL LEU VAL VAL GLN THR SEQRES 35 A 577 ASP LEU PRO VAL PRO HIS PRO ILE HIS LEU HIS GLY HIS SEQRES 36 A 577 ASP PHE TYR LEU LEU ALA GLN GLY PHE GLY GLN PHE ASN SEQRES 37 A 577 PRO GLN ASN VAL THR LEU LYS THR HIS ASN PRO PRO ARG SEQRES 38 A 577 ARG ASP THR ALA LEU MET THR ALA ALA THR PRO GLU ASN SEQRES 39 A 577 GLY GLY GLY GLY TYR MET VAL ILE GLY PHE PRO ALA ASP SEQRES 40 A 577 ASN PRO GLY VAL TRP LEU ILE HIS CYS HIS ILE GLY PHE SEQRES 41 A 577 HIS ALA THR GLU GLY PHE ALA GLN GLN ILE VAL GLU ARG SEQRES 42 A 577 GLN SER GLU PHE ASN THR PHE PHE SER GLU ASP LEU LEU SEQRES 43 A 577 GLU ASN THR CYS ASP ALA TRP ASP GLU TYR ALA LYS VAL SEQRES 44 A 577 ASN PRO TYR GLY HIS GLN TYR ARG ALA LEU ALA GLY PRO SEQRES 45 A 577 TYR GLU SER GLY ILE HET NAG B 1 14 HET NAG B 2 14 HET NAG C 1 14 HET NAG C 2 14 HET CU A 601 1 HET CU A 602 1 HET CU A 603 1 HET CU A 604 1 HET NAG A 605 14 HET BMA A 606 11 HET NAG A 607 14 HET NAG A 608 14 HET MAN A 613 11 HET NAG A 614 14 HET NAG A 615 14 HET BMA A 616 11 HET MAN A 617 11 HET PER A 618 2 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM CU COPPER (II) ION HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM PER PEROXIDE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 9(C8 H15 N O6) FORMUL 4 CU 4(CU 2+) FORMUL 9 BMA 2(C6 H12 O6) FORMUL 12 MAN 2(C6 H12 O6) FORMUL 17 PER O2 2- FORMUL 18 HOH *597(H2 O) HELIX 1 AA1 ASN A 117 ASP A 121 5 5 HELIX 2 AA2 LEU A 157 GLY A 162 5 6 HELIX 3 AA3 THR A 193 GLU A 203 1 11 HELIX 4 AA4 PRO A 406 ASP A 414 1 9 HELIX 5 AA5 LYS A 421 GLN A 424 5 4 HELIX 6 AA6 THR A 491 GLY A 495 5 5 HELIX 7 AA7 ILE A 518 GLU A 524 1 7 HELIX 8 AA8 GLN A 534 PHE A 540 5 7 HELIX 9 AA9 SER A 542 ASN A 560 1 19 HELIX 10 AB1 PRO A 561 HIS A 564 5 4 SHEET 1 AA1 4 ARG A 70 VAL A 75 0 SHEET 2 AA1 4 VAL A 51 ALA A 63 -1 N VAL A 59 O LEU A 74 SHEET 3 AA1 4 THR A 91 ASN A 98 1 O LYS A 93 N TYR A 54 SHEET 4 AA1 4 SER A 136 ARG A 142 -1 O TRP A 141 N VAL A 92 SHEET 1 AA2 4 GLY A 81 ASN A 87 0 SHEET 2 AA2 4 PHE A 164 HIS A 170 1 O LEU A 168 N ILE A 84 SHEET 3 AA2 4 GLY A 147 SER A 153 -1 N SER A 149 O ILE A 167 SHEET 4 AA2 4 ILE A 107 HIS A 110 -1 N HIS A 108 O HIS A 152 SHEET 1 AA3 6 THR A 212 ILE A 215 0 SHEET 2 AA3 6 HIS A 179 TRP A 189 -1 N TRP A 189 O THR A 212 SHEET 3 AA3 6 ARG A 242 ASN A 249 1 O ARG A 244 N HIS A 179 SHEET 4 AA3 6 ARG A 290 THR A 296 -1 O VAL A 295 N TYR A 243 SHEET 5 AA3 6 LEU A 265 SER A 270 -1 N ILE A 268 O ASP A 292 SHEET 6 AA3 6 VAL A 273 THR A 280 -1 O THR A 280 N LEU A 265 SHEET 1 AA4 2 ILE A 220 VAL A 222 0 SHEET 2 AA4 2 THR A 228 GLY A 230 -1 O VAL A 229 N TRP A 221 SHEET 1 AA5 5 GLN A 234 PHE A 237 0 SHEET 2 AA5 5 LYS A 324 TYR A 329 1 O HIS A 328 N THR A 235 SHEET 3 AA5 5 ASN A 303 PRO A 310 -1 N TYR A 304 O LEU A 327 SHEET 4 AA5 5 PHE A 256 ILE A 260 -1 N SER A 259 O ARG A 307 SHEET 5 AA5 5 VAL A 283 ILE A 285 -1 O ILE A 285 N PHE A 256 SHEET 1 AA6 6 LEU A 389 MET A 394 0 SHEET 2 AA6 6 GLN A 373 PHE A 384 -1 N ASP A 380 O THR A 393 SHEET 3 AA6 6 TRP A 435 THR A 442 1 O VAL A 437 N GLN A 373 SHEET 4 AA6 6 GLY A 498 PRO A 505 -1 O MET A 500 N VAL A 440 SHEET 5 AA6 6 PHE A 457 PHE A 464 -1 N TYR A 458 O GLY A 503 SHEET 6 AA6 6 ARG A 481 ARG A 482 -1 O ARG A 482 N PHE A 457 SHEET 1 AA7 5 VAL A 426 ALA A 429 0 SHEET 2 AA7 5 ALA A 527 GLU A 532 1 O VAL A 531 N ALA A 429 SHEET 3 AA7 5 GLY A 510 CYS A 516 -1 N TRP A 512 O ILE A 530 SHEET 4 AA7 5 HIS A 448 LEU A 452 -1 N HIS A 451 O HIS A 515 SHEET 5 AA7 5 THR A 484 MET A 487 -1 O ALA A 485 N ILE A 450 SSBOND 1 CYS A 129 CYS A 550 1555 1555 2.04 SSBOND 2 CYS A 314 CYS A 351 1555 1555 2.03 LINK ND2 ASN A 216 C1 NAG C 1 1555 1555 1.57 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.52 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.52 LINK NE2 HIS A 108 CU CU A 603 1555 1555 1.95 LINK ND1 HIS A 110 CU CU A 601 1555 1555 1.96 LINK NE2 HIS A 152 CU CU A 601 1555 1555 2.01 LINK NE2 HIS A 154 CU CU A 602 1555 1555 2.08 LINK ND1 HIS A 448 CU CU A 604 1555 1555 2.09 LINK NE2 HIS A 451 CU CU A 603 1555 1555 1.88 LINK NE2 HIS A 453 CU CU A 602 1555 1555 2.02 LINK NE2 HIS A 515 CU CU A 602 1555 1555 2.03 LINK SG CYS A 516 CU CU A 604 1555 1555 2.16 LINK NE2 HIS A 517 CU CU A 601 1555 1555 2.21 LINK ND1 HIS A 521 CU CU A 604 1555 1555 2.01 LINK CU CU A 602 O2 PER A 618 1555 1555 2.17 CISPEP 1 PHE A 79 PRO A 80 0 -9.90 CISPEP 2 VAL A 387 PRO A 388 0 -2.24 CRYST1 200.273 60.498 53.744 90.00 94.96 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004993 0.000000 0.000434 0.00000 SCALE2 0.000000 0.016529 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018677 0.00000