HEADER TRANSFERASE 20-SEP-16 5LX6
TITLE HUMAN PARP10 (ARTD10), CATALYTIC FRAGMENT IN COMPLEX WITH PARP
TITLE 2 INHIBITOR VELIPARIB
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: POLY [ADP-RIBOSE] POLYMERASE 10;
COMPND 3 CHAIN: A, B;
COMPND 4 SYNONYM: PARP-10,ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 10,
COMPND 5 ARTD10;
COMPND 6 EC: 2.4.2.30;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: PARP10;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C41;
SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4
KEYWDS TRANSFERASE DOMAIN, ADP-RIBOSYLATION, PARP INHIBITOR, TRANSFERASE
EXPDTA X-RAY DIFFRACTION
AUTHOR T.KARLBERG,A.G.THORSELL,H.SCHULER
REVDAT 3 17-JAN-24 5LX6 1 HETSYN
REVDAT 2 08-MAR-17 5LX6 1 JRNL
REVDAT 1 11-JAN-17 5LX6 0
JRNL AUTH A.G.THORSELL,T.EKBLAD,T.KARLBERG,M.LOW,A.F.PINTO,
JRNL AUTH 2 L.TRESAUGUES,M.MOCHE,M.S.COHEN,H.SCHULER
JRNL TITL STRUCTURAL BASIS FOR POTENCY AND PROMISCUITY IN
JRNL TITL 2 POLY(ADP-RIBOSE) POLYMERASE (PARP) AND TANKYRASE INHIBITORS.
JRNL REF J. MED. CHEM. V. 60 1262 2017
JRNL REFN ISSN 1520-4804
JRNL PMID 28001384
JRNL DOI 10.1021/ACS.JMEDCHEM.6B00990
REMARK 2
REMARK 2 RESOLUTION. 1.25 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.10.2
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.65
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2
REMARK 3 NUMBER OF REFLECTIONS : 141306
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.208
REMARK 3 R VALUE (WORKING SET) : 0.208
REMARK 3 FREE R VALUE : 0.213
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 7066
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.28
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.83
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 10396
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3239
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 9876
REMARK 3 BIN R VALUE (WORKING SET) : 0.3226
REMARK 3 BIN FREE R VALUE : 0.3507
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 520
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 3023
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 36
REMARK 3 SOLVENT ATOMS : 360
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 14.62
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.55
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.20200
REMARK 3 B22 (A**2) : 1.98020
REMARK 3 B33 (A**2) : -2.18220
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.01430
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.174
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.044
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.042
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.043
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.042
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 3178 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 4329 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1454 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 80 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 491 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 3178 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 392 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 3216 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.011
REMARK 3 BOND ANGLES (DEGREES) : 0.87
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.42
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.69
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 6
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: {A|817 - 854}
REMARK 3 ORIGIN FOR THE GROUP (A): 35.4090 7.1324 64.9945
REMARK 3 T TENSOR
REMARK 3 T11: 0.0017 T22: -0.0253
REMARK 3 T33: -0.0185 T12: 0.0011
REMARK 3 T13: 0.0139 T23: -0.0046
REMARK 3 L TENSOR
REMARK 3 L11: 1.0882 L22: 0.4387
REMARK 3 L33: 0.6295 L12: 0.1601
REMARK 3 L13: 0.2768 L23: 0.6318
REMARK 3 S TENSOR
REMARK 3 S11: 0.0236 S12: 0.0227 S13: -0.1273
REMARK 3 S21: -0.0535 S22: -0.0067 S23: 0.0191
REMARK 3 S31: 0.0764 S32: 0.0073 S33: -0.0169
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: {A|855 - 879}
REMARK 3 ORIGIN FOR THE GROUP (A): 47.1821 27.7600 61.0286
REMARK 3 T TENSOR
REMARK 3 T11: 0.0238 T22: 0.0096
REMARK 3 T33: -0.0027 T12: -0.0102
REMARK 3 T13: 0.0185 T23: 0.0118
REMARK 3 L TENSOR
REMARK 3 L11: 0.9441 L22: 3.2317
REMARK 3 L33: 1.1517 L12: 1.0699
REMARK 3 L13: -0.3362 L23: -0.4418
REMARK 3 S TENSOR
REMARK 3 S11: -0.0679 S12: 0.0216 S13: -0.0180
REMARK 3 S21: -0.1929 S22: -0.0148 S23: -0.2711
REMARK 3 S31: -0.0025 S32: 0.1756 S33: 0.0827
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: {A|880 - 1007}
REMARK 3 ORIGIN FOR THE GROUP (A): 45.5681 20.7098 75.4202
REMARK 3 T TENSOR
REMARK 3 T11: -0.0271 T22: -0.0300
REMARK 3 T33: -0.0374 T12: 0.0022
REMARK 3 T13: -0.0032 T23: 0.0031
REMARK 3 L TENSOR
REMARK 3 L11: 0.3392 L22: 0.9306
REMARK 3 L33: 0.6136 L12: 0.1507
REMARK 3 L13: 0.0633 L23: -0.1299
REMARK 3 S TENSOR
REMARK 3 S11: -0.0285 S12: -0.0350 S13: -0.0113
REMARK 3 S21: 0.0819 S22: -0.0149 S23: -0.0850
REMARK 3 S31: -0.0454 S32: 0.0510 S33: 0.0434
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: {B|819 - 862}
REMARK 3 ORIGIN FOR THE GROUP (A): 49.5603 59.6300 67.7592
REMARK 3 T TENSOR
REMARK 3 T11: 0.0151 T22: -0.0315
REMARK 3 T33: -0.0358 T12: -0.0251
REMARK 3 T13: 0.0115 T23: 0.0006
REMARK 3 L TENSOR
REMARK 3 L11: 0.6712 L22: 1.0235
REMARK 3 L33: 0.6957 L12: 0.6162
REMARK 3 L13: 0.1479 L23: 0.1018
REMARK 3 S TENSOR
REMARK 3 S11: -0.0309 S12: 0.0010 S13: 0.0638
REMARK 3 S21: -0.1182 S22: 0.0529 S23: 0.0115
REMARK 3 S31: -0.2014 S32: 0.0751 S33: -0.0219
REMARK 3
REMARK 3 TLS GROUP : 5
REMARK 3 SELECTION: {B|863 - 878}
REMARK 3 ORIGIN FOR THE GROUP (A): 33.0806 41.3645 62.0431
REMARK 3 T TENSOR
REMARK 3 T11: 0.0085 T22: 0.0076
REMARK 3 T33: 0.0009 T12: -0.0301
REMARK 3 T13: -0.0260 T23: 0.0212
REMARK 3 L TENSOR
REMARK 3 L11: 2.7368 L22: 1.8357
REMARK 3 L33: 2.4708 L12: -0.5339
REMARK 3 L13: -0.2283 L23: 0.8500
REMARK 3 S TENSOR
REMARK 3 S11: -0.0236 S12: -0.0342 S13: 0.0112
REMARK 3 S21: -0.2085 S22: 0.0132 S23: 0.1994
REMARK 3 S31: 0.0987 S32: -0.2706 S33: 0.0104
REMARK 3
REMARK 3 TLS GROUP : 6
REMARK 3 SELECTION: {B|879 - 1007}
REMARK 3 ORIGIN FOR THE GROUP (A): 40.0760 47.7956 76.7642
REMARK 3 T TENSOR
REMARK 3 T11: -0.0364 T22: -0.0305
REMARK 3 T33: -0.0311 T12: -0.0015
REMARK 3 T13: 0.0035 T23: -0.0048
REMARK 3 L TENSOR
REMARK 3 L11: 0.2112 L22: 0.8755
REMARK 3 L33: 1.0964 L12: 0.1582
REMARK 3 L13: -0.2312 L23: 0.1404
REMARK 3 S TENSOR
REMARK 3 S11: -0.0107 S12: -0.0174 S13: 0.0380
REMARK 3 S21: 0.0015 S22: 0.0156 S23: 0.0514
REMARK 3 S31: 0.0014 S32: -0.0330 S33: -0.0048
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 5LX6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-SEP-16.
REMARK 100 THE DEPOSITION ID IS D_1200001508.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 25-JAN-16
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.0
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I04-1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.92819
REMARK 200 MONOCHROMATOR : SINGLE BOUNCE MONOCHROMATOR
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : PIXEL
REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS
REMARK 200 DATA SCALING SOFTWARE : XSCALE
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 141779
REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250
REMARK 200 RESOLUTION RANGE LOW (A) : 47.650
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7
REMARK 200 DATA REDUNDANCY : 6.700
REMARK 200 R MERGE (I) : 0.05700
REMARK 200 R SYM (I) : 0.05700
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 20.0000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32
REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8
REMARK 200 DATA REDUNDANCY IN SHELL : 5.90
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.500
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: 3HKV
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 59.53
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG3350, 0.1 M AMMONIUM TARTRATE,
REMARK 280 PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X,Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.33850
REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 SER B 817
REMARK 465 MET B 818
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 MET A 818 SD CE
REMARK 470 ARG B 909 CD NE CZ NH1 NH2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 842 -125.86 51.46
REMARK 500 ARG A 875 -61.02 -94.00
REMARK 500 ASP B 842 -120.50 49.81
REMARK 500 PHE B 906 47.93 -100.87
REMARK 500
REMARK 500 REMARK: NULL
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 78P A 1101
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue 78P B 1101
DBREF 5LX6 A 819 1007 UNP Q53GL7 PAR10_HUMAN 819 1007
DBREF 5LX6 B 819 1007 UNP Q53GL7 PAR10_HUMAN 819 1007
SEQADV 5LX6 SER A 817 UNP Q53GL7 EXPRESSION TAG
SEQADV 5LX6 MET A 818 UNP Q53GL7 EXPRESSION TAG
SEQADV 5LX6 SER B 817 UNP Q53GL7 EXPRESSION TAG
SEQADV 5LX6 MET B 818 UNP Q53GL7 EXPRESSION TAG
SEQRES 1 A 191 SER MET ASN LEU GLU ARG LEU ALA GLU ASN THR GLY GLU
SEQRES 2 A 191 PHE GLN GLU VAL VAL ARG ALA PHE TYR ASP THR LEU ASP
SEQRES 3 A 191 ALA ALA ARG SER SER ILE ARG VAL VAL ARG VAL GLU ARG
SEQRES 4 A 191 VAL SER HIS PRO LEU LEU GLN GLN GLN TYR GLU LEU TYR
SEQRES 5 A 191 ARG GLU ARG LEU LEU GLN ARG CYS GLU ARG ARG PRO VAL
SEQRES 6 A 191 GLU GLN VAL LEU TYR HIS GLY THR THR ALA PRO ALA VAL
SEQRES 7 A 191 PRO ASP ILE CYS ALA HIS GLY PHE ASN ARG SER PHE CYS
SEQRES 8 A 191 GLY ARG ASN ALA THR VAL TYR GLY LYS GLY VAL TYR PHE
SEQRES 9 A 191 ALA ARG ARG ALA SER LEU SER VAL GLN ASP ARG TYR SER
SEQRES 10 A 191 PRO PRO ASN ALA ASP GLY HIS LYS ALA VAL PHE VAL ALA
SEQRES 11 A 191 ARG VAL LEU THR GLY ASP TYR GLY GLN GLY ARG ARG GLY
SEQRES 12 A 191 LEU ARG ALA PRO PRO LEU ARG GLY PRO GLY HIS VAL LEU
SEQRES 13 A 191 LEU ARG TYR ASP SER ALA VAL ASP CYS ILE CYS GLN PRO
SEQRES 14 A 191 SER ILE PHE VAL ILE PHE HIS ASP THR GLN ALA LEU PRO
SEQRES 15 A 191 THR HIS LEU ILE THR CYS GLU HIS VAL
SEQRES 1 B 191 SER MET ASN LEU GLU ARG LEU ALA GLU ASN THR GLY GLU
SEQRES 2 B 191 PHE GLN GLU VAL VAL ARG ALA PHE TYR ASP THR LEU ASP
SEQRES 3 B 191 ALA ALA ARG SER SER ILE ARG VAL VAL ARG VAL GLU ARG
SEQRES 4 B 191 VAL SER HIS PRO LEU LEU GLN GLN GLN TYR GLU LEU TYR
SEQRES 5 B 191 ARG GLU ARG LEU LEU GLN ARG CYS GLU ARG ARG PRO VAL
SEQRES 6 B 191 GLU GLN VAL LEU TYR HIS GLY THR THR ALA PRO ALA VAL
SEQRES 7 B 191 PRO ASP ILE CYS ALA HIS GLY PHE ASN ARG SER PHE CYS
SEQRES 8 B 191 GLY ARG ASN ALA THR VAL TYR GLY LYS GLY VAL TYR PHE
SEQRES 9 B 191 ALA ARG ARG ALA SER LEU SER VAL GLN ASP ARG TYR SER
SEQRES 10 B 191 PRO PRO ASN ALA ASP GLY HIS LYS ALA VAL PHE VAL ALA
SEQRES 11 B 191 ARG VAL LEU THR GLY ASP TYR GLY GLN GLY ARG ARG GLY
SEQRES 12 B 191 LEU ARG ALA PRO PRO LEU ARG GLY PRO GLY HIS VAL LEU
SEQRES 13 B 191 LEU ARG TYR ASP SER ALA VAL ASP CYS ILE CYS GLN PRO
SEQRES 14 B 191 SER ILE PHE VAL ILE PHE HIS ASP THR GLN ALA LEU PRO
SEQRES 15 B 191 THR HIS LEU ILE THR CYS GLU HIS VAL
HET 78P A1101 18
HET 78P B1101 18
HETNAM 78P (2R)-2-(7-CARBAMOYL-1H-BENZIMIDAZOL-2-YL)-2-
HETNAM 2 78P METHYLPYRROLIDINIUM
HETSYN 78P VELIPARIB
FORMUL 3 78P 2(C13 H16 N4 O)
FORMUL 5 HOH *360(H2 O)
HELIX 1 AA1 THR A 827 THR A 840 1 14
HELIX 2 AA2 LEU A 841 ARG A 845 5 5
HELIX 3 AA3 HIS A 858 CYS A 876 1 19
HELIX 4 AA4 THR A 890 PRO A 892 5 3
HELIX 5 AA5 ALA A 893 GLY A 901 1 9
HELIX 6 AA6 ASN A 903 CYS A 907 5 5
HELIX 7 AA7 ARG A 923 VAL A 928 1 6
HELIX 8 AA8 THR B 827 THR B 840 1 14
HELIX 9 AA9 LEU B 841 SER B 846 5 6
HELIX 10 AB1 HIS B 858 CYS B 876 1 19
HELIX 11 AB2 THR B 890 PRO B 892 5 3
HELIX 12 AB3 ALA B 893 GLY B 901 1 9
HELIX 13 AB4 ARG B 923 VAL B 928 1 6
SHEET 1 AA1 5 LEU A 820 ARG A 822 0
SHEET 2 AA1 5 ILE A 848 VAL A 856 -1 O ARG A 855 N GLU A 821
SHEET 3 AA1 5 ALA A 996 HIS A1006 -1 O THR A1003 N VAL A 851
SHEET 4 AA1 5 LYS A 941 VAL A 948 -1 N VAL A 943 O ILE A1002
SHEET 5 AA1 5 GLN A 883 THR A 889 -1 N HIS A 887 O PHE A 944
SHEET 1 AA2 4 VAL A 918 ALA A 921 0
SHEET 2 AA2 4 ILE A 987 ILE A 990 -1 O ILE A 990 N VAL A 918
SHEET 3 AA2 4 SER A 977 VAL A 979 -1 N ALA A 978 O VAL A 989
SHEET 4 AA2 4 TYR A 953 GLN A 955 1 N GLY A 954 O VAL A 979
SHEET 1 AA3 5 LEU B 820 ARG B 822 0
SHEET 2 AA3 5 ILE B 848 VAL B 856 -1 O ARG B 855 N GLU B 821
SHEET 3 AA3 5 ALA B 996 HIS B1006 -1 O THR B1003 N VAL B 851
SHEET 4 AA3 5 LYS B 941 VAL B 948 -1 N VAL B 943 O ILE B1002
SHEET 5 AA3 5 GLN B 883 THR B 889 -1 N HIS B 887 O PHE B 944
SHEET 1 AA4 4 VAL B 918 ALA B 921 0
SHEET 2 AA4 4 ILE B 987 ILE B 990 -1 O ILE B 990 N VAL B 918
SHEET 3 AA4 4 SER B 977 VAL B 979 -1 N ALA B 978 O VAL B 989
SHEET 4 AA4 4 TYR B 953 GLN B 955 1 N GLY B 954 O VAL B 979
CISPEP 1 ARG A 879 PRO A 880 0 1.70
CISPEP 2 ARG B 879 PRO B 880 0 2.17
CISPEP 3 CYS B 907 GLY B 908 0 -2.38
SITE 1 AC1 9 HIS A 887 GLY A 888 CYS A 907 ALA A 911
SITE 2 AC1 9 TYR A 919 SER A 927 TYR A 932 HOH A1254
SITE 3 AC1 9 HOH A1270
SITE 1 AC2 8 HIS B 887 GLY B 888 CYS B 907 ALA B 911
SITE 2 AC2 8 TYR B 919 LEU B 926 SER B 927 TYR B 932
CRYST1 52.480 88.677 58.405 90.00 104.68 90.00 P 1 21 1 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.019055 0.000000 0.004992 0.00000
SCALE2 0.000000 0.011277 0.000000 0.00000
SCALE3 0.000000 0.000000 0.017700 0.00000