HEADER TRANSFERASE 20-SEP-16 5LX6 TITLE HUMAN PARP10 (ARTD10), CATALYTIC FRAGMENT IN COMPLEX WITH PARP TITLE 2 INHIBITOR VELIPARIB COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLY [ADP-RIBOSE] POLYMERASE 10; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: PARP-10,ADP-RIBOSYLTRANSFERASE DIPHTHERIA TOXIN-LIKE 10, COMPND 5 ARTD10; COMPND 6 EC: 2.4.2.30; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PARP10; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: C41; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC-BSA4 KEYWDS TRANSFERASE DOMAIN, ADP-RIBOSYLATION, PARP INHIBITOR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.KARLBERG,A.G.THORSELL,H.SCHULER REVDAT 3 17-JAN-24 5LX6 1 HETSYN REVDAT 2 08-MAR-17 5LX6 1 JRNL REVDAT 1 11-JAN-17 5LX6 0 JRNL AUTH A.G.THORSELL,T.EKBLAD,T.KARLBERG,M.LOW,A.F.PINTO, JRNL AUTH 2 L.TRESAUGUES,M.MOCHE,M.S.COHEN,H.SCHULER JRNL TITL STRUCTURAL BASIS FOR POTENCY AND PROMISCUITY IN JRNL TITL 2 POLY(ADP-RIBOSE) POLYMERASE (PARP) AND TANKYRASE INHIBITORS. JRNL REF J. MED. CHEM. V. 60 1262 2017 JRNL REFN ISSN 1520-4804 JRNL PMID 28001384 JRNL DOI 10.1021/ACS.JMEDCHEM.6B00990 REMARK 2 REMARK 2 RESOLUTION. 1.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.65 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 141306 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.208 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 7066 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.25 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.28 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.83 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 10396 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.3239 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 9876 REMARK 3 BIN R VALUE (WORKING SET) : 0.3226 REMARK 3 BIN FREE R VALUE : 0.3507 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 520 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3023 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 36 REMARK 3 SOLVENT ATOMS : 360 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.62 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.55 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.20200 REMARK 3 B22 (A**2) : 1.98020 REMARK 3 B33 (A**2) : -2.18220 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01430 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.174 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.044 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.042 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.043 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.042 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.938 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3178 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4329 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1454 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 80 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 491 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3178 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 392 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3216 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.011 REMARK 3 BOND ANGLES (DEGREES) : 0.87 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.42 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.69 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|817 - 854} REMARK 3 ORIGIN FOR THE GROUP (A): 35.4090 7.1324 64.9945 REMARK 3 T TENSOR REMARK 3 T11: 0.0017 T22: -0.0253 REMARK 3 T33: -0.0185 T12: 0.0011 REMARK 3 T13: 0.0139 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.0882 L22: 0.4387 REMARK 3 L33: 0.6295 L12: 0.1601 REMARK 3 L13: 0.2768 L23: 0.6318 REMARK 3 S TENSOR REMARK 3 S11: 0.0236 S12: 0.0227 S13: -0.1273 REMARK 3 S21: -0.0535 S22: -0.0067 S23: 0.0191 REMARK 3 S31: 0.0764 S32: 0.0073 S33: -0.0169 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {A|855 - 879} REMARK 3 ORIGIN FOR THE GROUP (A): 47.1821 27.7600 61.0286 REMARK 3 T TENSOR REMARK 3 T11: 0.0238 T22: 0.0096 REMARK 3 T33: -0.0027 T12: -0.0102 REMARK 3 T13: 0.0185 T23: 0.0118 REMARK 3 L TENSOR REMARK 3 L11: 0.9441 L22: 3.2317 REMARK 3 L33: 1.1517 L12: 1.0699 REMARK 3 L13: -0.3362 L23: -0.4418 REMARK 3 S TENSOR REMARK 3 S11: -0.0679 S12: 0.0216 S13: -0.0180 REMARK 3 S21: -0.1929 S22: -0.0148 S23: -0.2711 REMARK 3 S31: -0.0025 S32: 0.1756 S33: 0.0827 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {A|880 - 1007} REMARK 3 ORIGIN FOR THE GROUP (A): 45.5681 20.7098 75.4202 REMARK 3 T TENSOR REMARK 3 T11: -0.0271 T22: -0.0300 REMARK 3 T33: -0.0374 T12: 0.0022 REMARK 3 T13: -0.0032 T23: 0.0031 REMARK 3 L TENSOR REMARK 3 L11: 0.3392 L22: 0.9306 REMARK 3 L33: 0.6136 L12: 0.1507 REMARK 3 L13: 0.0633 L23: -0.1299 REMARK 3 S TENSOR REMARK 3 S11: -0.0285 S12: -0.0350 S13: -0.0113 REMARK 3 S21: 0.0819 S22: -0.0149 S23: -0.0850 REMARK 3 S31: -0.0454 S32: 0.0510 S33: 0.0434 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {B|819 - 862} REMARK 3 ORIGIN FOR THE GROUP (A): 49.5603 59.6300 67.7592 REMARK 3 T TENSOR REMARK 3 T11: 0.0151 T22: -0.0315 REMARK 3 T33: -0.0358 T12: -0.0251 REMARK 3 T13: 0.0115 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 0.6712 L22: 1.0235 REMARK 3 L33: 0.6957 L12: 0.6162 REMARK 3 L13: 0.1479 L23: 0.1018 REMARK 3 S TENSOR REMARK 3 S11: -0.0309 S12: 0.0010 S13: 0.0638 REMARK 3 S21: -0.1182 S22: 0.0529 S23: 0.0115 REMARK 3 S31: -0.2014 S32: 0.0751 S33: -0.0219 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: {B|863 - 878} REMARK 3 ORIGIN FOR THE GROUP (A): 33.0806 41.3645 62.0431 REMARK 3 T TENSOR REMARK 3 T11: 0.0085 T22: 0.0076 REMARK 3 T33: 0.0009 T12: -0.0301 REMARK 3 T13: -0.0260 T23: 0.0212 REMARK 3 L TENSOR REMARK 3 L11: 2.7368 L22: 1.8357 REMARK 3 L33: 2.4708 L12: -0.5339 REMARK 3 L13: -0.2283 L23: 0.8500 REMARK 3 S TENSOR REMARK 3 S11: -0.0236 S12: -0.0342 S13: 0.0112 REMARK 3 S21: -0.2085 S22: 0.0132 S23: 0.1994 REMARK 3 S31: 0.0987 S32: -0.2706 S33: 0.0104 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: {B|879 - 1007} REMARK 3 ORIGIN FOR THE GROUP (A): 40.0760 47.7956 76.7642 REMARK 3 T TENSOR REMARK 3 T11: -0.0364 T22: -0.0305 REMARK 3 T33: -0.0311 T12: -0.0015 REMARK 3 T13: 0.0035 T23: -0.0048 REMARK 3 L TENSOR REMARK 3 L11: 0.2112 L22: 0.8755 REMARK 3 L33: 1.0964 L12: 0.1582 REMARK 3 L13: -0.2312 L23: 0.1404 REMARK 3 S TENSOR REMARK 3 S11: -0.0107 S12: -0.0174 S13: 0.0380 REMARK 3 S21: 0.0015 S22: 0.0156 S23: 0.0514 REMARK 3 S31: 0.0014 S32: -0.0330 S33: -0.0048 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 5LX6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001508. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92819 REMARK 200 MONOCHROMATOR : SINGLE BOUNCE MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 141779 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.250 REMARK 200 RESOLUTION RANGE LOW (A) : 47.650 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 6.700 REMARK 200 R MERGE (I) : 0.05700 REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 20.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.32 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3HKV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 12% PEG3350, 0.1 M AMMONIUM TARTRATE, REMARK 280 PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.33850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER B 817 REMARK 465 MET B 818 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 818 SD CE REMARK 470 ARG B 909 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 842 -125.86 51.46 REMARK 500 ARG A 875 -61.02 -94.00 REMARK 500 ASP B 842 -120.50 49.81 REMARK 500 PHE B 906 47.93 -100.87 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78P A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 78P B 1101 DBREF 5LX6 A 819 1007 UNP Q53GL7 PAR10_HUMAN 819 1007 DBREF 5LX6 B 819 1007 UNP Q53GL7 PAR10_HUMAN 819 1007 SEQADV 5LX6 SER A 817 UNP Q53GL7 EXPRESSION TAG SEQADV 5LX6 MET A 818 UNP Q53GL7 EXPRESSION TAG SEQADV 5LX6 SER B 817 UNP Q53GL7 EXPRESSION TAG SEQADV 5LX6 MET B 818 UNP Q53GL7 EXPRESSION TAG SEQRES 1 A 191 SER MET ASN LEU GLU ARG LEU ALA GLU ASN THR GLY GLU SEQRES 2 A 191 PHE GLN GLU VAL VAL ARG ALA PHE TYR ASP THR LEU ASP SEQRES 3 A 191 ALA ALA ARG SER SER ILE ARG VAL VAL ARG VAL GLU ARG SEQRES 4 A 191 VAL SER HIS PRO LEU LEU GLN GLN GLN TYR GLU LEU TYR SEQRES 5 A 191 ARG GLU ARG LEU LEU GLN ARG CYS GLU ARG ARG PRO VAL SEQRES 6 A 191 GLU GLN VAL LEU TYR HIS GLY THR THR ALA PRO ALA VAL SEQRES 7 A 191 PRO ASP ILE CYS ALA HIS GLY PHE ASN ARG SER PHE CYS SEQRES 8 A 191 GLY ARG ASN ALA THR VAL TYR GLY LYS GLY VAL TYR PHE SEQRES 9 A 191 ALA ARG ARG ALA SER LEU SER VAL GLN ASP ARG TYR SER SEQRES 10 A 191 PRO PRO ASN ALA ASP GLY HIS LYS ALA VAL PHE VAL ALA SEQRES 11 A 191 ARG VAL LEU THR GLY ASP TYR GLY GLN GLY ARG ARG GLY SEQRES 12 A 191 LEU ARG ALA PRO PRO LEU ARG GLY PRO GLY HIS VAL LEU SEQRES 13 A 191 LEU ARG TYR ASP SER ALA VAL ASP CYS ILE CYS GLN PRO SEQRES 14 A 191 SER ILE PHE VAL ILE PHE HIS ASP THR GLN ALA LEU PRO SEQRES 15 A 191 THR HIS LEU ILE THR CYS GLU HIS VAL SEQRES 1 B 191 SER MET ASN LEU GLU ARG LEU ALA GLU ASN THR GLY GLU SEQRES 2 B 191 PHE GLN GLU VAL VAL ARG ALA PHE TYR ASP THR LEU ASP SEQRES 3 B 191 ALA ALA ARG SER SER ILE ARG VAL VAL ARG VAL GLU ARG SEQRES 4 B 191 VAL SER HIS PRO LEU LEU GLN GLN GLN TYR GLU LEU TYR SEQRES 5 B 191 ARG GLU ARG LEU LEU GLN ARG CYS GLU ARG ARG PRO VAL SEQRES 6 B 191 GLU GLN VAL LEU TYR HIS GLY THR THR ALA PRO ALA VAL SEQRES 7 B 191 PRO ASP ILE CYS ALA HIS GLY PHE ASN ARG SER PHE CYS SEQRES 8 B 191 GLY ARG ASN ALA THR VAL TYR GLY LYS GLY VAL TYR PHE SEQRES 9 B 191 ALA ARG ARG ALA SER LEU SER VAL GLN ASP ARG TYR SER SEQRES 10 B 191 PRO PRO ASN ALA ASP GLY HIS LYS ALA VAL PHE VAL ALA SEQRES 11 B 191 ARG VAL LEU THR GLY ASP TYR GLY GLN GLY ARG ARG GLY SEQRES 12 B 191 LEU ARG ALA PRO PRO LEU ARG GLY PRO GLY HIS VAL LEU SEQRES 13 B 191 LEU ARG TYR ASP SER ALA VAL ASP CYS ILE CYS GLN PRO SEQRES 14 B 191 SER ILE PHE VAL ILE PHE HIS ASP THR GLN ALA LEU PRO SEQRES 15 B 191 THR HIS LEU ILE THR CYS GLU HIS VAL HET 78P A1101 18 HET 78P B1101 18 HETNAM 78P (2R)-2-(7-CARBAMOYL-1H-BENZIMIDAZOL-2-YL)-2- HETNAM 2 78P METHYLPYRROLIDINIUM HETSYN 78P VELIPARIB FORMUL 3 78P 2(C13 H16 N4 O) FORMUL 5 HOH *360(H2 O) HELIX 1 AA1 THR A 827 THR A 840 1 14 HELIX 2 AA2 LEU A 841 ARG A 845 5 5 HELIX 3 AA3 HIS A 858 CYS A 876 1 19 HELIX 4 AA4 THR A 890 PRO A 892 5 3 HELIX 5 AA5 ALA A 893 GLY A 901 1 9 HELIX 6 AA6 ASN A 903 CYS A 907 5 5 HELIX 7 AA7 ARG A 923 VAL A 928 1 6 HELIX 8 AA8 THR B 827 THR B 840 1 14 HELIX 9 AA9 LEU B 841 SER B 846 5 6 HELIX 10 AB1 HIS B 858 CYS B 876 1 19 HELIX 11 AB2 THR B 890 PRO B 892 5 3 HELIX 12 AB3 ALA B 893 GLY B 901 1 9 HELIX 13 AB4 ARG B 923 VAL B 928 1 6 SHEET 1 AA1 5 LEU A 820 ARG A 822 0 SHEET 2 AA1 5 ILE A 848 VAL A 856 -1 O ARG A 855 N GLU A 821 SHEET 3 AA1 5 ALA A 996 HIS A1006 -1 O THR A1003 N VAL A 851 SHEET 4 AA1 5 LYS A 941 VAL A 948 -1 N VAL A 943 O ILE A1002 SHEET 5 AA1 5 GLN A 883 THR A 889 -1 N HIS A 887 O PHE A 944 SHEET 1 AA2 4 VAL A 918 ALA A 921 0 SHEET 2 AA2 4 ILE A 987 ILE A 990 -1 O ILE A 990 N VAL A 918 SHEET 3 AA2 4 SER A 977 VAL A 979 -1 N ALA A 978 O VAL A 989 SHEET 4 AA2 4 TYR A 953 GLN A 955 1 N GLY A 954 O VAL A 979 SHEET 1 AA3 5 LEU B 820 ARG B 822 0 SHEET 2 AA3 5 ILE B 848 VAL B 856 -1 O ARG B 855 N GLU B 821 SHEET 3 AA3 5 ALA B 996 HIS B1006 -1 O THR B1003 N VAL B 851 SHEET 4 AA3 5 LYS B 941 VAL B 948 -1 N VAL B 943 O ILE B1002 SHEET 5 AA3 5 GLN B 883 THR B 889 -1 N HIS B 887 O PHE B 944 SHEET 1 AA4 4 VAL B 918 ALA B 921 0 SHEET 2 AA4 4 ILE B 987 ILE B 990 -1 O ILE B 990 N VAL B 918 SHEET 3 AA4 4 SER B 977 VAL B 979 -1 N ALA B 978 O VAL B 989 SHEET 4 AA4 4 TYR B 953 GLN B 955 1 N GLY B 954 O VAL B 979 CISPEP 1 ARG A 879 PRO A 880 0 1.70 CISPEP 2 ARG B 879 PRO B 880 0 2.17 CISPEP 3 CYS B 907 GLY B 908 0 -2.38 SITE 1 AC1 9 HIS A 887 GLY A 888 CYS A 907 ALA A 911 SITE 2 AC1 9 TYR A 919 SER A 927 TYR A 932 HOH A1254 SITE 3 AC1 9 HOH A1270 SITE 1 AC2 8 HIS B 887 GLY B 888 CYS B 907 ALA B 911 SITE 2 AC2 8 TYR B 919 LEU B 926 SER B 927 TYR B 932 CRYST1 52.480 88.677 58.405 90.00 104.68 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019055 0.000000 0.004992 0.00000 SCALE2 0.000000 0.011277 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017700 0.00000