HEADER TRANSPORT PROTEIN 23-SEP-16 5LXZ TITLE W288A MUTANT OF GLXA FROM STREPTOMYCES LIVIDANS: CU-BOUND FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: SECRETED PROTEIN; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES LIVIDANS TK24; SOURCE 3 ORGANISM_TAXID: 457428; SOURCE 4 GENE: SLIV_23470; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS COPPER, METALLORADICAL, AA5, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.K.CHAPLIN,M.A.HOUGH,J.A.R.WORRALL REVDAT 2 17-JAN-24 5LXZ 1 REMARK REVDAT 1 26-JUL-17 5LXZ 0 JRNL AUTH A.K.CHAPLIN,D.A.SVISTUNENKO,M.A.HOUGH,M.T.WILSON, JRNL AUTH 2 E.VIJGENBOOM,J.A.R.WORRALL JRNL TITL THE ROLE OF A SECOND-COORDINATION SPHERE TRYPTOPHAN RESIDUE JRNL TITL 2 IN THE MATURATION OF THE CATALYTIC METALLORADICAL SITE IN JRNL TITL 3 THE AUXILLARY ACTIVITY FAMILY 5 (AA5) GLXA FROM STREPTOMYCES JRNL TITL 4 LIVIDANS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 123812 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.164 REMARK 3 R VALUE (WORKING SET) : 0.163 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6566 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.49 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.53 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9093 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.11 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 462 REMARK 3 BIN FREE R VALUE : 0.3020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4634 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 60 REMARK 3 SOLVENT ATOMS : 665 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.28000 REMARK 3 B22 (A**2) : -0.39000 REMARK 3 B33 (A**2) : 0.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.058 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.058 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.041 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.117 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4972 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4711 ; 0.008 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6740 ; 1.655 ; 1.975 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10886 ; 1.012 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 638 ; 7.032 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 223 ;32.554 ;23.946 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 827 ;12.112 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 36 ;12.176 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 719 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5699 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1111 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2485 ; 1.127 ; 1.259 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2482 ; 1.122 ; 1.257 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3120 ; 1.812 ; 1.881 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 5LXZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-SEP-16. REMARK 100 THE DEPOSITION ID IS D_1200001511. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : SILICON REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.27 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 130534 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.490 REMARK 200 RESOLUTION RANGE LOW (A) : 40.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.49 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.52 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.75400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4UNM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 20000, 0.1M SODIUM ACETATE PH REMARK 280 5 15 MG/ML PROTEIN, PH 4, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 35.25500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.14500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.43500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.14500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 35.25500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 40.43500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22860 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO B 200 REMARK 465 ALA B 201 REMARK 465 THR B 202 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS B 145 CD CE NZ REMARK 480 GLU B 195 CG CD OE1 OE2 REMARK 480 LYS B 196 CD CE NZ REMARK 480 LYS B 259 CD CE NZ REMARK 480 LYS B 603 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 510 NE ARG B 512 2.13 REMARK 500 OD2 ASP B 494 O HOH B 801 2.14 REMARK 500 OXT ACT B 704 O HOH B 802 2.15 REMARK 500 NZ LYS B 430 O HOH B 804 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 1150 O HOH B 1388 4455 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS B 121 CA - CB - SG ANGL. DEV. = 7.1 DEGREES REMARK 500 TYR B 289 CB - CG - CD2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ASP B 494 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 140 143.17 -170.86 REMARK 500 TYR B 141 52.01 -157.25 REMARK 500 VAL B 206 -64.74 -99.46 REMARK 500 GLN B 252 -166.53 -76.32 REMARK 500 ALA B 255 -152.58 -146.98 REMARK 500 ASP B 260 77.35 -105.24 REMARK 500 TYR B 289 42.04 75.23 REMARK 500 TYR B 289 42.04 75.30 REMARK 500 SER B 304 -159.43 68.35 REMARK 500 TYR B 339 52.61 37.82 REMARK 500 TYR B 359 161.31 75.96 REMARK 500 ASN B 376 -0.84 79.67 REMARK 500 ASP B 457 0.45 81.69 REMARK 500 VAL B 492 -166.54 -122.50 REMARK 500 ASN B 500 -125.62 -117.86 REMARK 500 ASN B 500 -125.62 -116.93 REMARK 500 SER B 518 121.32 122.26 REMARK 500 ARG B 547 -151.82 -128.16 REMARK 500 ARG B 547 -138.44 -136.66 REMARK 500 LEU B 619 -60.41 -93.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B1464 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH B1465 DISTANCE = 6.29 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 702 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 94 OD1 REMARK 620 2 ARG B 140 NH2 96.5 REMARK 620 3 GLU B 142 OE1 172.5 76.0 REMARK 620 4 HOH B 815 O 96.6 156.4 90.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 701 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 TYR B 289 OH REMARK 620 2 HIS B 502 NE2 153.9 REMARK 620 3 HIS B 589 NE2 103.4 100.9 REMARK 620 4 HOH B 805 O 61.7 96.7 159.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CU B 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 704 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 705 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 706 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 707 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 708 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 709 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 710 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 711 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 712 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 713 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 714 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 715 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 716 DBREF 5LXZ B 43 645 UNP D6EWM0 D6EWM0_STRLI 43 645 SEQADV 5LXZ ALA B 42 UNP D6EWM0 EXPRESSION TAG SEQADV 5LXZ ALA B 288 UNP D6EWM0 TRP 288 ENGINEERED MUTATION SEQRES 1 B 604 ALA LYS ILE ASN GLN PRO GLU TYR LYS ALA ALA ASN GLY SEQRES 2 B 604 LYS TRP GLU ILE ILE GLU PHE PRO GLU LYS TYR ARG GLN SEQRES 3 B 604 ASN THR ILE HIS ALA ALA LEU LEU ARG THR GLY LYS VAL SEQRES 4 B 604 LEU MET VAL ALA GLY SER GLY ASN ASN GLN ASP ASN SER SEQRES 5 B 604 ASP ASP LYS GLN TYR ASP THR ARG ILE TRP ASP PRO VAL SEQRES 6 B 604 LYS GLY THR ILE LYS LYS VAL PRO THR PRO SER ASP LEU SEQRES 7 B 604 PHE CYS THR GLY HIS THR GLN LEU ALA ASN GLY ASN LEU SEQRES 8 B 604 LEU ILE ALA GLY GLY THR LYS ARG TYR GLU LYS LEU LYS SEQRES 9 B 604 GLY ASP VAL THR LYS ALA GLY GLY LEU MET VAL VAL HIS SEQRES 10 B 604 ASN GLU ASN PRO ASP LYS PRO ILE THR LEU PRO ALA GLY SEQRES 11 B 604 THR LYS PHE THR GLY LYS GLU ASN GLY LYS THR PHE VAL SEQRES 12 B 604 SER LYS ASP PRO VAL LEU VAL PRO ARG ALA GLU LYS VAL SEQRES 13 B 604 PHE ASP PRO ALA THR GLY ALA PHE VAL ARG ASN ASP PRO SEQRES 14 B 604 GLY LEU GLY ARG ILE TYR VAL GLU ALA GLN LYS SER GLY SEQRES 15 B 604 SER ALA TYR GLU THR GLY THR GLU ASP ASN TYR ARG VAL SEQRES 16 B 604 GLN GLY LEU SER GLY ALA ASP ALA ARG ASN THR TYR GLY SEQRES 17 B 604 ILE ALA GLN LYS LEU ALA LEU ASP LYS LYS ASP PHE GLN SEQRES 18 B 604 GLY ILE ARG ASP ALA PHE GLU PHE ASP PRO VAL ALA GLU SEQRES 19 B 604 LYS TYR ILE LYS VAL ASP PRO MET HIS GLU ALA ARG ALA SEQRES 20 B 604 TYR PRO THR LEU THR THR LEU GLY ASP GLY LYS ILE LEU SEQRES 21 B 604 SER VAL SER GLY LEU ASP ASP ILE GLY GLN LEU VAL PRO SEQRES 22 B 604 GLY LYS ASN GLU VAL TYR ASP PRO LYS THR LYS ALA TRP SEQRES 23 B 604 THR TYR THR ASP LYS VAL ARG GLN PHE PRO THR TYR PRO SEQRES 24 B 604 ALA LEU PHE LEU MET GLN ASN GLY LYS ILE PHE TYR SER SEQRES 25 B 604 GLY ALA ASN ALA GLY TYR GLY PRO ASP ASP VAL GLY ARG SEQRES 26 B 604 THR PRO GLY VAL TRP ASP VAL GLU THR ASN LYS PHE THR SEQRES 27 B 604 LYS VAL PRO GLY MET SER ASP ALA ASN MET LEU GLU THR SEQRES 28 B 604 ALA ASN THR VAL LEU LEU PRO PRO ALA GLN ASP GLU LYS SEQRES 29 B 604 TYR MET VAL ILE GLY GLY GLY GLY VAL GLY GLU SER LYS SEQRES 30 B 604 LEU SER SER GLU LYS THR ARG ILE ALA ASP LEU LYS ALA SEQRES 31 B 604 ASP ASP PRO LYS PHE VAL ASP GLY PRO SER LEU GLU LYS SEQRES 32 B 604 GLY THR ARG TYR PRO GLN ALA SER ILE LEU PRO ASP ASP SEQRES 33 B 604 SER VAL LEU VAL SER GLY GLY SER GLN ASP TYR ARG GLY SEQRES 34 B 604 ARG GLY ASP SER ASN ILE LEU GLN ALA ARG LEU TYR HIS SEQRES 35 B 604 PRO ASP THR ASN GLU PHE GLU ARG VAL ALA ASP PRO LEU SEQRES 36 B 604 VAL GLY ARG ASN TYR HIS SER GLY SER ILE LEU LEU PRO SEQRES 37 B 604 ASP GLY ARG LEU MET PHE PHE GLY SER ASP SER LEU TYR SEQRES 38 B 604 ALA ASP LYS ALA ASN THR LYS PRO GLY LYS PHE GLU GLN SEQRES 39 B 604 ARG ILE GLU ILE TYR THR PRO PRO TYR LEU TYR ARG ASP SEQRES 40 B 604 SER ARG PRO ASP LEU SER GLY GLY PRO GLN THR ILE ALA SEQRES 41 B 604 ARG GLY GLY SER GLY THR PHE THR SER ARG ALA ALA SER SEQRES 42 B 604 THR VAL LYS LYS VAL ARG LEU ILE ARG PRO SER ALA SER SEQRES 43 B 604 THR HIS VAL THR ASP VAL ASP GLN ARG SER ILE ALA LEU SEQRES 44 B 604 ASP PHE LYS ALA ASP GLY ASP LYS LEU THR VAL THR VAL SEQRES 45 B 604 PRO SER GLY LYS ASN LEU VAL GLN SER GLY TRP TYR MET SEQRES 46 B 604 MET PHE VAL THR ASP GLY GLU GLY THR PRO SER LYS ALA SEQRES 47 B 604 GLU TRP VAL ARG VAL PRO HET CU B 701 1 HET CU B 702 1 HET ACT B 703 4 HET ACT B 704 4 HET PO4 B 705 5 HET PO4 B 706 5 HET EDO B 707 4 HET EDO B 708 4 HET EDO B 709 4 HET EDO B 710 4 HET EDO B 711 4 HET EDO B 712 4 HET EDO B 713 4 HET EDO B 714 4 HET EDO B 715 4 HET EDO B 716 4 HETNAM CU COPPER (II) ION HETNAM ACT ACETATE ION HETNAM PO4 PHOSPHATE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 CU 2(CU 2+) FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 6 PO4 2(O4 P 3-) FORMUL 8 EDO 10(C2 H6 O2) FORMUL 18 HOH *665(H2 O) HELIX 1 AA1 GLN B 46 GLY B 54 1 9 HELIX 2 AA2 PRO B 62 ARG B 66 5 5 HELIX 3 AA3 ASN B 89 LYS B 96 1 8 HELIX 4 AA4 GLY B 223 GLU B 227 5 5 HELIX 5 AA5 SER B 240 ASN B 246 1 7 HELIX 6 AA6 PRO B 400 ASP B 403 5 4 HELIX 7 AA7 ASP B 467 ARG B 471 5 5 HELIX 8 AA8 PRO B 542 TYR B 546 5 5 HELIX 9 AA9 ALA B 572 SER B 574 5 3 SHEET 1 AA1 4 LYS B 55 ILE B 59 0 SHEET 2 AA1 4 ILE B 537 THR B 541 -1 O THR B 541 N LYS B 55 SHEET 3 AA1 4 LEU B 513 GLY B 517 -1 N LEU B 513 O TYR B 540 SHEET 4 AA1 4 SER B 503 LEU B 507 -1 N ILE B 506 O MET B 514 SHEET 1 AA2 5 ILE B 110 LYS B 112 0 SHEET 2 AA2 5 ASP B 99 TRP B 103 -1 N ILE B 102 O LYS B 111 SHEET 3 AA2 5 VAL B 80 GLY B 85 -1 N MET B 82 O ARG B 101 SHEET 4 AA2 5 HIS B 71 LEU B 74 -1 N HIS B 71 O VAL B 83 SHEET 5 AA2 5 ALA B 586 THR B 588 -1 O SER B 587 N ALA B 72 SHEET 1 AA3 4 THR B 122 GLN B 126 0 SHEET 2 AA3 4 LEU B 132 GLY B 136 -1 O LEU B 133 N THR B 125 SHEET 3 AA3 4 ALA B 267 ASP B 271 -1 O PHE B 270 N LEU B 132 SHEET 4 AA3 4 LYS B 276 LYS B 279 -1 O LYS B 276 N ASP B 271 SHEET 1 AA4 2 THR B 138 LYS B 143 0 SHEET 2 AA4 2 LYS B 259 GLY B 263 -1 O GLN B 262 N LYS B 139 SHEET 1 AA5 7 GLY B 152 ASN B 159 0 SHEET 2 AA5 7 GLY B 211 GLU B 218 -1 O GLY B 213 N VAL B 157 SHEET 3 AA5 7 THR B 182 SER B 185 -1 N VAL B 184 O GLU B 218 SHEET 4 AA5 7 LYS B 173 GLY B 176 -1 N PHE B 174 O PHE B 183 SHEET 5 AA5 7 ASP B 232 VAL B 236 -1 O ARG B 235 N THR B 175 SHEET 6 AA5 7 THR B 247 ALA B 251 -1 O GLY B 249 N TYR B 234 SHEET 7 AA5 7 GLY B 152 ASN B 159 -1 N HIS B 158 O TYR B 248 SHEET 1 AA6 2 ILE B 166 LEU B 168 0 SHEET 2 AA6 2 VAL B 189 VAL B 191 -1 O VAL B 191 N ILE B 166 SHEET 1 AA7 2 GLU B 195 PHE B 198 0 SHEET 2 AA7 2 PHE B 205 ASP B 209 -1 O ARG B 207 N VAL B 197 SHEET 1 AA8 4 THR B 291 THR B 294 0 SHEET 2 AA8 4 ILE B 300 VAL B 303 -1 O LEU B 301 N THR B 293 SHEET 3 AA8 4 GLU B 318 TYR B 320 -1 O GLU B 318 N SER B 302 SHEET 4 AA8 4 TRP B 327 TYR B 329 -1 O THR B 328 N VAL B 319 SHEET 1 AA9 4 LEU B 342 LEU B 344 0 SHEET 2 AA9 4 ILE B 350 TYR B 352 -1 O PHE B 351 N PHE B 343 SHEET 3 AA9 4 GLY B 369 TRP B 371 -1 O TRP B 371 N ILE B 350 SHEET 4 AA9 4 PHE B 378 LYS B 380 -1 O THR B 379 N VAL B 370 SHEET 1 AB1 4 ASN B 394 LEU B 397 0 SHEET 2 AB1 4 LYS B 405 ILE B 409 -1 O MET B 407 N VAL B 396 SHEET 3 AB1 4 THR B 424 ASP B 428 -1 O ALA B 427 N TYR B 406 SHEET 4 AB1 4 PHE B 436 ASP B 438 -1 O VAL B 437 N ILE B 426 SHEET 1 AB2 4 GLN B 450 ILE B 453 0 SHEET 2 AB2 4 VAL B 459 SER B 462 -1 O SER B 462 N GLN B 450 SHEET 3 AB2 4 ALA B 479 HIS B 483 -1 O TYR B 482 N VAL B 459 SHEET 4 AB2 4 GLU B 488 ARG B 491 -1 O GLU B 490 N LEU B 481 SHEET 1 AB3 5 GLN B 558 THR B 559 0 SHEET 2 AB3 5 GLU B 640 VAL B 644 1 O ARG B 643 N GLN B 558 SHEET 3 AB3 5 GLY B 623 ASP B 631 -1 N MET B 627 O GLU B 640 SHEET 4 AB3 5 VAL B 576 ILE B 582 -1 N ILE B 582 O MET B 626 SHEET 5 AB3 5 SER B 597 ALA B 599 -1 O ILE B 598 N LEU B 581 SHEET 1 AB4 3 SER B 565 THR B 569 0 SHEET 2 AB4 3 LYS B 608 THR B 612 -1 O VAL B 611 N GLY B 566 SHEET 3 AB4 3 ASP B 601 ASP B 605 -1 N LYS B 603 O THR B 610 LINK OD1 ASP B 94 CU B CU B 702 1555 1555 1.80 LINK NH2BARG B 140 CU B CU B 702 1555 1555 2.61 LINK OE1 GLU B 142 CU B CU B 702 1555 1555 1.85 LINK OH ATYR B 289 CU CU B 701 1555 1555 2.06 LINK NE2 HIS B 502 CU CU B 701 1555 1555 2.03 LINK NE2 HIS B 589 CU CU B 701 1555 1555 2.07 LINK CU CU B 701 O HOH B 805 1555 1555 2.19 LINK CU B CU B 702 O BHOH B 815 1555 1555 1.98 CISPEP 1 PRO B 399 PRO B 400 0 -8.48 CISPEP 2 GLY B 556 PRO B 557 0 0.41 SITE 1 AC1 5 TYR B 289 TYR B 501 HIS B 502 HIS B 589 SITE 2 AC1 5 HOH B 805 SITE 1 AC2 5 ASP B 94 ARG B 140 TYR B 141 GLU B 142 SITE 2 AC2 5 HOH B 815 SITE 1 AC3 3 ARG B 334 HOH B 968 HOH B1158 SITE 1 AC4 7 LYS B 323 VAL B 364 GLY B 365 LYS B 380 SITE 2 AC4 7 EDO B 712 HOH B 802 HOH B 917 SITE 1 AC5 8 THR B 175 ARG B 235 PRO B 614 SER B 615 SITE 2 AC5 8 HOH B 848 HOH B 939 HOH B 949 HOH B1117 SITE 1 AC6 4 ARG B 512 ARG B 550 LYS B 638 HOH B 897 SITE 1 AC7 3 ASP B 438 ASN B 487 GLU B 488 SITE 1 AC8 6 VAL B 370 THR B 379 LYS B 380 VAL B 381 SITE 2 AC8 6 PRO B 434 HOH B 871 SITE 1 AC9 6 LEU B 256 GLU B 416 ARG B 471 TYR B 522 SITE 2 AC9 6 HOH B 813 HOH B 962 SITE 1 AD1 5 LYS B 578 VAL B 579 ARG B 580 LEU B 600 SITE 2 AD1 5 HOH B1113 SITE 1 AD2 7 ASN B 88 ARG B 469 ASP B 519 SER B 520 SITE 2 AD2 7 GLY B 531 HOH B1028 HOH B1305 SITE 1 AD3 8 ARG B 334 GLN B 335 PHE B 336 GLY B 365 SITE 2 AD3 8 PHE B 378 ACT B 704 HOH B 917 HOH B 998 SITE 1 AD4 5 LEU B 295 GLY B 296 ASP B 297 GLY B 348 SITE 2 AD4 5 HOH B 991 SITE 1 AD5 7 THR B 330 ASP B 331 LYS B 332 VAL B 373 SITE 2 AD5 7 GLU B 374 HOH B 956 HOH B 979 SITE 1 AD6 6 GLY B 123 HIS B 124 LEU B 292 TYR B 339 SITE 2 AD6 6 THR B 588 HOH B1013 SITE 1 AD7 5 GLU B 231 GLN B 335 PRO B 361 VAL B 364 SITE 2 AD7 5 HOH B 807 CRYST1 70.510 80.870 140.290 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014182 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012366 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007128 0.00000