data_5LYV # _entry.id 5LYV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5LYV pdb_00005lyv 10.2210/pdb5lyv/pdb WWPDB D_1200001599 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-01-25 2 'Structure model' 1 1 2017-05-03 3 'Structure model' 1 2 2017-08-30 4 'Structure model' 1 3 2018-04-18 5 'Structure model' 2 0 2022-04-20 6 'Structure model' 2 1 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Structure summary' 6 5 'Structure model' Advisory 7 5 'Structure model' 'Atomic model' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Derived calculations' 11 5 'Structure model' 'Structure summary' 12 6 'Structure model' 'Data collection' 13 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_audit_support 2 3 'Structure model' struct_conn 3 4 'Structure model' entity 4 5 'Structure model' atom_site 5 5 'Structure model' atom_site_anisotrop 6 5 'Structure model' database_2 7 5 'Structure model' entity 8 5 'Structure model' ndb_struct_na_base_pair 9 5 'Structure model' ndb_struct_na_base_pair_step 10 5 'Structure model' pdbx_entity_nonpoly 11 5 'Structure model' pdbx_nonpoly_scheme 12 5 'Structure model' pdbx_poly_seq_scheme 13 5 'Structure model' pdbx_struct_assembly_gen 14 5 'Structure model' pdbx_struct_conn_angle 15 5 'Structure model' pdbx_unobs_or_zero_occ_residues 16 5 'Structure model' pdbx_validate_close_contact 17 5 'Structure model' pdbx_validate_rmsd_angle 18 5 'Structure model' struct_asym 19 5 'Structure model' struct_conn 20 5 'Structure model' struct_ref_seq 21 5 'Structure model' struct_site 22 5 'Structure model' struct_site_gen 23 6 'Structure model' chem_comp_atom 24 6 'Structure model' chem_comp_bond 25 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_pdbx_audit_support.funding_organization' 2 4 'Structure model' '_entity.pdbx_description' 3 5 'Structure model' '_atom_site.B_iso_or_equiv' 4 5 'Structure model' '_atom_site.Cartn_x' 5 5 'Structure model' '_atom_site.Cartn_y' 6 5 'Structure model' '_atom_site.Cartn_z' 7 5 'Structure model' '_atom_site.auth_asym_id' 8 5 'Structure model' '_atom_site.auth_atom_id' 9 5 'Structure model' '_atom_site.auth_comp_id' 10 5 'Structure model' '_atom_site.auth_seq_id' 11 5 'Structure model' '_atom_site.group_PDB' 12 5 'Structure model' '_atom_site.label_alt_id' 13 5 'Structure model' '_atom_site.label_asym_id' 14 5 'Structure model' '_atom_site.label_atom_id' 15 5 'Structure model' '_atom_site.label_comp_id' 16 5 'Structure model' '_atom_site.label_entity_id' 17 5 'Structure model' '_atom_site.label_seq_id' 18 5 'Structure model' '_atom_site.occupancy' 19 5 'Structure model' '_atom_site.pdbx_PDB_ins_code' 20 5 'Structure model' '_atom_site.type_symbol' 21 5 'Structure model' '_atom_site_anisotrop.U[1][1]' 22 5 'Structure model' '_atom_site_anisotrop.U[1][2]' 23 5 'Structure model' '_atom_site_anisotrop.U[1][3]' 24 5 'Structure model' '_atom_site_anisotrop.U[2][2]' 25 5 'Structure model' '_atom_site_anisotrop.U[2][3]' 26 5 'Structure model' '_atom_site_anisotrop.U[3][3]' 27 5 'Structure model' '_atom_site_anisotrop.id' 28 5 'Structure model' '_atom_site_anisotrop.pdbx_PDB_ins_code' 29 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_asym_id' 30 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 31 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_comp_id' 32 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 33 5 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 34 5 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 35 5 'Structure model' '_atom_site_anisotrop.pdbx_label_comp_id' 36 5 'Structure model' '_atom_site_anisotrop.pdbx_label_seq_id' 37 5 'Structure model' '_atom_site_anisotrop.type_symbol' 38 5 'Structure model' '_database_2.pdbx_DOI' 39 5 'Structure model' '_database_2.pdbx_database_accession' 40 5 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id' 41 5 'Structure model' '_pdbx_poly_seq_scheme.auth_seq_num' 42 5 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id' 43 5 'Structure model' '_pdbx_poly_seq_scheme.pdb_seq_num' 44 5 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 45 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 46 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 47 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 48 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 49 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 50 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 51 5 'Structure model' '_struct_ref_seq.db_align_end' 52 5 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_end' 53 5 'Structure model' '_struct_site.details' 54 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 55 5 'Structure model' '_struct_site_gen.auth_seq_id' 56 5 'Structure model' '_struct_site_gen.label_asym_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5LYV _pdbx_database_status.recvd_initial_deposition_date 2016-09-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Martinez-Zapien, D.' 1 ? 'Legrand, P.' 2 ? 'McEwen, A.G.' 3 ? 'Pasquali, S.' 4 ? 'Dock-Bregeon, A.-C.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 45 _citation.language ? _citation.page_first 3568 _citation.page_last 3579 _citation.title 'The crystal structure of the 5 functional domain of the transcription riboregulator 7SK.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkw1351 _citation.pdbx_database_id_PubMed 28082395 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Martinez-Zapien, D.' 1 ? primary 'Legrand, P.' 2 ? primary 'McEwen, A.G.' 3 ? primary 'Proux, F.' 4 ? primary 'Cragnolini, T.' 5 ? primary 'Pasquali, S.' 6 ? primary 'Dock-Bregeon, A.C.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn '7SK RNA' 18330.740 2 ? ? ? ? 2 non-polymer syn 'osmium (III) hexammine' 286.365 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 5 water nat water 18.015 242 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'GGGAUCUGUCACCCCAUUGAUCGCCUUCGGGCUGAUCUGGCUGGCUAGGCGGGUCC(CCC)' _entity_poly.pdbx_seq_one_letter_code_can GGGAUCUGUCACCCCAUUGAUCGCCUUCGGGCUGAUCUGGCUGGCUAGGCGGGUCCC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'osmium (III) hexammine' OHX 3 'MAGNESIUM ION' MG 4 'CHLORIDE ION' CL 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 G n 1 4 A n 1 5 U n 1 6 C n 1 7 U n 1 8 G n 1 9 U n 1 10 C n 1 11 A n 1 12 C n 1 13 C n 1 14 C n 1 15 C n 1 16 A n 1 17 U n 1 18 U n 1 19 G n 1 20 A n 1 21 U n 1 22 C n 1 23 G n 1 24 C n 1 25 C n 1 26 U n 1 27 U n 1 28 C n 1 29 G n 1 30 G n 1 31 G n 1 32 C n 1 33 U n 1 34 G n 1 35 A n 1 36 U n 1 37 C n 1 38 U n 1 39 G n 1 40 G n 1 41 C n 1 42 U n 1 43 G n 1 44 G n 1 45 C n 1 46 U n 1 47 A n 1 48 G n 1 49 G n 1 50 C n 1 51 G n 1 52 G n 1 53 G n 1 54 U n 1 55 C n 1 56 C n 1 57 CCC n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 57 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name HUMAN _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CCC 'RNA linking' n ;CYTIDINE-5'-PHOSPHATE-2',3'-CYCLIC PHOSPHATE ; ? 'C9 H13 N3 O10 P2' 385.161 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 OHX non-polymer . 'osmium (III) hexammine' 'osmium(6+) hexaazanide' 'H12 N6 Os' 286.365 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 24 24 G G A . n A 1 2 G 2 25 25 G G A . n A 1 3 G 3 26 26 G G A . n A 1 4 A 4 27 27 A A A . n A 1 5 U 5 28 28 U U A . n A 1 6 C 6 29 29 C C A . n A 1 7 U 7 30 30 U U A . n A 1 8 G 8 31 31 G G A . n A 1 9 U 9 32 32 U U A . n A 1 10 C 10 33 33 C C A . n A 1 11 A 11 34 34 A A A . n A 1 12 C 12 35 35 C C A . n A 1 13 C 13 36 36 C C A . n A 1 14 C 14 37 37 C C A . n A 1 15 C 15 38 38 C C A . n A 1 16 A 16 39 39 A A A . n A 1 17 U 17 40 40 U U A . n A 1 18 U 18 41 41 U U A . n A 1 19 G 19 42 42 G G A . n A 1 20 A 20 43 43 A A A . n A 1 21 U 21 44 44 U U A . n A 1 22 C 22 45 45 C C A . n A 1 23 G 23 46 46 G G A . n A 1 24 C 24 47 47 C C A . n A 1 25 C 25 48 48 C C A . n A 1 26 U 26 48 48 U U A A n A 1 27 U 27 48 48 U U A B n A 1 28 C 28 48 48 C C A C n A 1 29 G 29 48 48 G G A D n A 1 30 G 30 60 60 G G A . n A 1 31 G 31 61 61 G G A . n A 1 32 C 32 62 62 C C A . n A 1 33 U 33 63 63 U U A . n A 1 34 G 34 64 64 G G A . n A 1 35 A 35 65 65 A A A . n A 1 36 U 36 66 66 U U A . n A 1 37 C 37 67 67 C C A . n A 1 38 U 38 68 68 U U A . n A 1 39 G 39 69 69 G G A . n A 1 40 G 40 70 70 G G A . n A 1 41 C 41 71 71 C C A . n A 1 42 U 42 72 72 U U A . n A 1 43 G 43 73 73 G G A . n A 1 44 G 44 74 74 G G A . n A 1 45 C 45 75 75 C C A . n A 1 46 U 46 76 76 U U A . n A 1 47 A 47 77 77 A A A . n A 1 48 G 48 78 78 G G A . n A 1 49 G 49 79 79 G G A . n A 1 50 C 50 80 80 C C A . n A 1 51 G 51 81 81 G G A . n A 1 52 G 52 82 82 G G A . n A 1 53 G 53 83 83 G G A . n A 1 54 U 54 84 84 U U A . n A 1 55 C 55 85 85 C C A . n A 1 56 C 56 86 86 C C A . n A 1 57 CCC 57 101 87 CCC CCC A . n B 1 1 G 1 24 24 G G B . n B 1 2 G 2 25 25 G G B . n B 1 3 G 3 26 26 G G B . n B 1 4 A 4 27 27 A A B . n B 1 5 U 5 28 28 U U B . n B 1 6 C 6 29 29 C C B . n B 1 7 U 7 30 30 U U B . n B 1 8 G 8 31 31 G G B . n B 1 9 U 9 32 32 U U B . n B 1 10 C 10 33 33 C C B . n B 1 11 A 11 34 34 A A B . n B 1 12 C 12 35 35 C C B . n B 1 13 C 13 36 36 C C B . n B 1 14 C 14 37 37 C C B . n B 1 15 C 15 38 38 C C B . n B 1 16 A 16 39 39 A A B . n B 1 17 U 17 40 40 U U B . n B 1 18 U 18 41 41 U U B . n B 1 19 G 19 42 42 G G B . n B 1 20 A 20 43 43 A A B . n B 1 21 U 21 44 44 U U B . n B 1 22 C 22 45 45 C C B . n B 1 23 G 23 46 46 G G B . n B 1 24 C 24 47 47 C C B . n B 1 25 C 25 48 48 C C B . n B 1 26 U 26 48 48 U U B A n B 1 27 U 27 48 48 U U B B n B 1 28 C 28 48 48 C C B C n B 1 29 G 29 48 48 G G B D n B 1 30 G 30 60 60 G G B . n B 1 31 G 31 61 61 G G B . n B 1 32 C 32 62 62 C C B . n B 1 33 U 33 63 63 U U B . n B 1 34 G 34 64 64 G G B . n B 1 35 A 35 65 65 A A B . n B 1 36 U 36 66 66 U U B . n B 1 37 C 37 67 67 C C B . n B 1 38 U 38 68 68 U U B . n B 1 39 G 39 69 69 G G B . n B 1 40 G 40 70 70 G G B . n B 1 41 C 41 71 71 C C B . n B 1 42 U 42 72 72 U U B . n B 1 43 G 43 73 73 G G B . n B 1 44 G 44 74 74 G G B . n B 1 45 C 45 75 75 C C B . n B 1 46 U 46 76 76 U U B . n B 1 47 A 47 77 77 A A B . n B 1 48 G 48 78 78 G G B . n B 1 49 G 49 79 79 G G B . n B 1 50 C 50 80 80 C C B . n B 1 51 G 51 81 81 G G B . n B 1 52 G 52 82 82 G G B . n B 1 53 G 53 83 83 G G B . n B 1 54 U 54 84 84 U U B . n B 1 55 C 55 85 85 C C B . n B 1 56 C 56 86 86 C C B . n B 1 57 CCC 57 101 87 CCC CCC B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 OHX 1 201 2 OHX OHX A . D 3 MG 1 201 1 MG MG B . E 4 CL 1 202 1 CL CL B . F 5 HOH 1 301 22 HOH HOH A . F 5 HOH 2 302 142 HOH HOH A . F 5 HOH 3 303 105 HOH HOH A . F 5 HOH 4 304 79 HOH HOH A . F 5 HOH 5 305 41 HOH HOH A . F 5 HOH 6 306 42 HOH HOH A . F 5 HOH 7 307 212 HOH HOH A . F 5 HOH 8 308 98 HOH HOH A . F 5 HOH 9 309 6 HOH HOH A . F 5 HOH 10 310 70 HOH HOH A . F 5 HOH 11 311 171 HOH HOH A . F 5 HOH 12 312 108 HOH HOH A . F 5 HOH 13 313 92 HOH HOH A . F 5 HOH 14 314 95 HOH HOH A . F 5 HOH 15 315 189 HOH HOH A . F 5 HOH 16 316 71 HOH HOH A . F 5 HOH 17 317 59 HOH HOH A . F 5 HOH 18 318 216 HOH HOH A . F 5 HOH 19 319 186 HOH HOH A . F 5 HOH 20 320 162 HOH HOH A . F 5 HOH 21 321 9 HOH HOH A . F 5 HOH 22 322 67 HOH HOH A . F 5 HOH 23 323 43 HOH HOH A . F 5 HOH 24 324 32 HOH HOH A . F 5 HOH 25 325 76 HOH HOH A . F 5 HOH 26 326 45 HOH HOH A . F 5 HOH 27 327 21 HOH HOH A . F 5 HOH 28 328 197 HOH HOH A . F 5 HOH 29 329 62 HOH HOH A . F 5 HOH 30 330 54 HOH HOH A . F 5 HOH 31 331 177 HOH HOH A . F 5 HOH 32 332 147 HOH HOH A . F 5 HOH 33 333 53 HOH HOH A . F 5 HOH 34 334 35 HOH HOH A . F 5 HOH 35 335 18 HOH HOH A . F 5 HOH 36 336 56 HOH HOH A . F 5 HOH 37 337 97 HOH HOH A . F 5 HOH 38 338 228 HOH HOH A . F 5 HOH 39 339 60 HOH HOH A . F 5 HOH 40 340 17 HOH HOH A . F 5 HOH 41 341 170 HOH HOH A . F 5 HOH 42 342 15 HOH HOH A . F 5 HOH 43 343 48 HOH HOH A . F 5 HOH 44 344 7 HOH HOH A . F 5 HOH 45 345 113 HOH HOH A . F 5 HOH 46 346 12 HOH HOH A . F 5 HOH 47 347 11 HOH HOH A . F 5 HOH 48 348 96 HOH HOH A . F 5 HOH 49 349 239 HOH HOH A . F 5 HOH 50 350 101 HOH HOH A . F 5 HOH 51 351 110 HOH HOH A . F 5 HOH 52 352 148 HOH HOH A . F 5 HOH 53 353 183 HOH HOH A . F 5 HOH 54 354 129 HOH HOH A . F 5 HOH 55 355 100 HOH HOH A . F 5 HOH 56 356 202 HOH HOH A . F 5 HOH 57 357 112 HOH HOH A . F 5 HOH 58 358 61 HOH HOH A . F 5 HOH 59 359 211 HOH HOH A . F 5 HOH 60 360 188 HOH HOH A . F 5 HOH 61 361 109 HOH HOH A . F 5 HOH 62 362 94 HOH HOH A . F 5 HOH 63 363 141 HOH HOH A . F 5 HOH 64 364 69 HOH HOH A . F 5 HOH 65 365 102 HOH HOH A . F 5 HOH 66 366 117 HOH HOH A . F 5 HOH 67 367 135 HOH HOH A . F 5 HOH 68 368 93 HOH HOH A . F 5 HOH 69 369 153 HOH HOH A . F 5 HOH 70 370 229 HOH HOH A . F 5 HOH 71 371 226 HOH HOH A . F 5 HOH 72 372 237 HOH HOH A . F 5 HOH 73 373 200 HOH HOH A . F 5 HOH 74 374 115 HOH HOH A . F 5 HOH 75 375 213 HOH HOH A . F 5 HOH 76 376 58 HOH HOH A . F 5 HOH 77 377 179 HOH HOH A . F 5 HOH 78 378 82 HOH HOH A . F 5 HOH 79 379 165 HOH HOH A . F 5 HOH 80 380 49 HOH HOH A . F 5 HOH 81 381 84 HOH HOH A . F 5 HOH 82 382 214 HOH HOH A . F 5 HOH 83 383 203 HOH HOH A . F 5 HOH 84 384 103 HOH HOH A . F 5 HOH 85 385 155 HOH HOH A . F 5 HOH 86 386 116 HOH HOH A . F 5 HOH 87 387 57 HOH HOH A . F 5 HOH 88 388 201 HOH HOH A . F 5 HOH 89 389 176 HOH HOH A . F 5 HOH 90 390 187 HOH HOH A . F 5 HOH 91 391 210 HOH HOH A . F 5 HOH 92 392 240 HOH HOH A . F 5 HOH 93 393 140 HOH HOH A . F 5 HOH 94 394 231 HOH HOH A . F 5 HOH 95 395 196 HOH HOH A . F 5 HOH 96 396 167 HOH HOH A . F 5 HOH 97 397 230 HOH HOH A . F 5 HOH 98 398 114 HOH HOH A . F 5 HOH 99 399 168 HOH HOH A . F 5 HOH 100 400 181 HOH HOH A . F 5 HOH 101 401 215 HOH HOH A . G 5 HOH 1 301 90 HOH HOH B . G 5 HOH 2 302 44 HOH HOH B . G 5 HOH 3 303 39 HOH HOH B . G 5 HOH 4 304 158 HOH HOH B . G 5 HOH 5 305 136 HOH HOH B . G 5 HOH 6 306 5 HOH HOH B . G 5 HOH 7 307 132 HOH HOH B . G 5 HOH 8 308 174 HOH HOH B . G 5 HOH 9 309 125 HOH HOH B . G 5 HOH 10 310 8 HOH HOH B . G 5 HOH 11 311 192 HOH HOH B . G 5 HOH 12 312 144 HOH HOH B . G 5 HOH 13 313 2 HOH HOH B . G 5 HOH 14 314 73 HOH HOH B . G 5 HOH 15 315 133 HOH HOH B . G 5 HOH 16 316 40 HOH HOH B . G 5 HOH 17 317 87 HOH HOH B . G 5 HOH 18 318 89 HOH HOH B . G 5 HOH 19 319 27 HOH HOH B . G 5 HOH 20 320 219 HOH HOH B . G 5 HOH 21 321 28 HOH HOH B . G 5 HOH 22 322 3 HOH HOH B . G 5 HOH 23 323 64 HOH HOH B . G 5 HOH 24 324 38 HOH HOH B . G 5 HOH 25 325 78 HOH HOH B . G 5 HOH 26 326 184 HOH HOH B . G 5 HOH 27 327 222 HOH HOH B . G 5 HOH 28 328 34 HOH HOH B . G 5 HOH 29 329 16 HOH HOH B . G 5 HOH 30 330 85 HOH HOH B . G 5 HOH 31 331 173 HOH HOH B . G 5 HOH 32 332 75 HOH HOH B . G 5 HOH 33 333 81 HOH HOH B . G 5 HOH 34 334 139 HOH HOH B . G 5 HOH 35 335 150 HOH HOH B . G 5 HOH 36 336 83 HOH HOH B . G 5 HOH 37 337 120 HOH HOH B . G 5 HOH 38 338 63 HOH HOH B . G 5 HOH 39 339 242 HOH HOH B . G 5 HOH 40 340 232 HOH HOH B . G 5 HOH 41 341 163 HOH HOH B . G 5 HOH 42 342 47 HOH HOH B . G 5 HOH 43 343 52 HOH HOH B . G 5 HOH 44 344 208 HOH HOH B . G 5 HOH 45 345 51 HOH HOH B . G 5 HOH 46 346 128 HOH HOH B . G 5 HOH 47 347 233 HOH HOH B . G 5 HOH 48 348 123 HOH HOH B . G 5 HOH 49 349 33 HOH HOH B . G 5 HOH 50 350 4 HOH HOH B . G 5 HOH 51 351 50 HOH HOH B . G 5 HOH 52 352 20 HOH HOH B . G 5 HOH 53 353 191 HOH HOH B . G 5 HOH 54 354 172 HOH HOH B . G 5 HOH 55 355 1 HOH HOH B . G 5 HOH 56 356 80 HOH HOH B . G 5 HOH 57 357 238 HOH HOH B . G 5 HOH 58 358 126 HOH HOH B . G 5 HOH 59 359 19 HOH HOH B . G 5 HOH 60 360 72 HOH HOH B . G 5 HOH 61 361 24 HOH HOH B . G 5 HOH 62 362 91 HOH HOH B . G 5 HOH 63 363 30 HOH HOH B . G 5 HOH 64 364 131 HOH HOH B . G 5 HOH 65 365 74 HOH HOH B . G 5 HOH 66 366 119 HOH HOH B . G 5 HOH 67 367 143 HOH HOH B . G 5 HOH 68 368 77 HOH HOH B . G 5 HOH 69 369 65 HOH HOH B . G 5 HOH 70 370 25 HOH HOH B . G 5 HOH 71 371 23 HOH HOH B . G 5 HOH 72 372 10 HOH HOH B . G 5 HOH 73 373 206 HOH HOH B . G 5 HOH 74 374 193 HOH HOH B . G 5 HOH 75 375 169 HOH HOH B . G 5 HOH 76 376 46 HOH HOH B . G 5 HOH 77 377 137 HOH HOH B . G 5 HOH 78 378 145 HOH HOH B . G 5 HOH 79 379 29 HOH HOH B . G 5 HOH 80 380 68 HOH HOH B . G 5 HOH 81 381 178 HOH HOH B . G 5 HOH 82 382 185 HOH HOH B . G 5 HOH 83 383 160 HOH HOH B . G 5 HOH 84 384 36 HOH HOH B . G 5 HOH 85 385 227 HOH HOH B . G 5 HOH 86 386 224 HOH HOH B . G 5 HOH 87 387 118 HOH HOH B . G 5 HOH 88 388 221 HOH HOH B . G 5 HOH 89 389 151 HOH HOH B . G 5 HOH 90 390 14 HOH HOH B . G 5 HOH 91 391 121 HOH HOH B . G 5 HOH 92 392 138 HOH HOH B . G 5 HOH 93 393 152 HOH HOH B . G 5 HOH 94 394 124 HOH HOH B . G 5 HOH 95 395 195 HOH HOH B . G 5 HOH 96 396 198 HOH HOH B . G 5 HOH 97 397 235 HOH HOH B . G 5 HOH 98 398 156 HOH HOH B . G 5 HOH 99 399 37 HOH HOH B . G 5 HOH 100 400 111 HOH HOH B . G 5 HOH 101 401 149 HOH HOH B . G 5 HOH 102 402 26 HOH HOH B . G 5 HOH 103 403 217 HOH HOH B . G 5 HOH 104 404 159 HOH HOH B . G 5 HOH 105 405 88 HOH HOH B . G 5 HOH 106 406 225 HOH HOH B . G 5 HOH 107 407 209 HOH HOH B . G 5 HOH 108 408 194 HOH HOH B . G 5 HOH 109 409 154 HOH HOH B . G 5 HOH 110 410 234 HOH HOH B . G 5 HOH 111 411 31 HOH HOH B . G 5 HOH 112 412 182 HOH HOH B . G 5 HOH 113 413 106 HOH HOH B . G 5 HOH 114 414 134 HOH HOH B . G 5 HOH 115 415 122 HOH HOH B . G 5 HOH 116 416 13 HOH HOH B . G 5 HOH 117 417 207 HOH HOH B . G 5 HOH 118 418 190 HOH HOH B . G 5 HOH 119 419 55 HOH HOH B . G 5 HOH 120 420 86 HOH HOH B . G 5 HOH 121 421 218 HOH HOH B . G 5 HOH 122 422 130 HOH HOH B . G 5 HOH 123 423 236 HOH HOH B . G 5 HOH 124 424 175 HOH HOH B . G 5 HOH 125 425 205 HOH HOH B . G 5 HOH 126 426 164 HOH HOH B . G 5 HOH 127 427 66 HOH HOH B . G 5 HOH 128 428 223 HOH HOH B . G 5 HOH 129 429 107 HOH HOH B . G 5 HOH 130 430 199 HOH HOH B . G 5 HOH 131 431 104 HOH HOH B . G 5 HOH 132 432 146 HOH HOH B . G 5 HOH 133 433 204 HOH HOH B . G 5 HOH 134 434 180 HOH HOH B . G 5 HOH 135 435 99 HOH HOH B . G 5 HOH 136 436 127 HOH HOH B . G 5 HOH 137 437 157 HOH HOH B . G 5 HOH 138 438 161 HOH HOH B . G 5 HOH 139 439 220 HOH HOH B . G 5 HOH 140 440 166 HOH HOH B . G 5 HOH 141 441 241 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER-TNT ? ? ? 2.10.2 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.20 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? . 6 # _cell.length_a 47.120 _cell.length_b 47.740 _cell.length_c 68.940 _cell.angle_alpha 90.000 _cell.angle_beta 105.200 _cell.angle_gamma 90.000 _cell.entry_id 5LYV _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 5LYV _symmetry.Int_Tables_number 4 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5LYV _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.04 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 39.74 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% PEG 1000, 50 mM Tris pH 7.5, 50 to 75 mM NaCl, 50 mM MgCl2, 3% DMSO' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2010-11-11 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.13956 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SOLEIL BEAMLINE PROXIMA 1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.13956 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 'PROXIMA 1' _diffrn_source.pdbx_synchrotron_site SOLEIL # _reflns.d_resolution_high 2.350 _reflns.pdbx_number_measured_all 41939 _reflns.number_obs 22741 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_netI_over_sigmaI 7.370 _reflns.pdbx_chi_squared 0.986 _reflns.percent_possible_obs 93.400 _reflns.observed_criterion_sigma_I -3.000 _reflns.pdbx_Rrim_I_all 0.083 _reflns.pdbx_CC_half 0.995 _reflns.B_iso_Wilson_estimate 67.780 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 5LYV _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy 1.8 # loop_ _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_ordinal _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_CC_half 1 1 2.350 2.410 1943 ? 1368 0 0.458 1.300 ? ? ? ? ? 1816 ? ? ? ? ? 75.300 0.644 ? 0.774 1 2 2.410 2.480 2299 ? 1436 0 0.457 1.640 ? ? ? ? ? 1752 ? ? ? ? ? 82.000 0.633 ? 0.743 1 3 2.480 2.550 2752 ? 1509 0 0.395 2.120 ? ? ? ? ? 1655 ? ? ? ? ? 91.200 0.528 ? 0.802 1 4 2.550 2.630 3210 ? 1658 0 0.419 2.210 ? ? ? ? ? 1714 ? ? ? ? ? 96.700 0.559 ? 0.789 1 5 2.630 2.710 3015 ? 1562 0 0.276 3.130 ? ? ? ? ? 1587 ? ? ? ? ? 98.400 0.366 ? 0.892 1 6 2.710 2.810 2995 ? 1558 0 0.202 4.100 ? ? ? ? ? 1592 ? ? ? ? ? 97.900 0.271 ? 0.948 1 7 2.810 2.920 2769 ? 1446 0 0.170 4.660 ? ? ? ? ? 1471 ? ? ? ? ? 98.300 0.226 ? 0.957 1 8 2.920 3.040 2680 ? 1405 0 0.114 6.190 ? ? ? ? ? 1435 ? ? ? ? ? 97.900 0.152 ? 0.989 1 9 3.040 3.170 2546 ? 1339 0 0.088 7.510 ? ? ? ? ? 1395 ? ? ? ? ? 96.000 0.118 ? 0.991 1 10 3.170 3.320 2425 ? 1283 0 0.073 8.450 ? ? ? ? ? 1306 ? ? ? ? ? 98.200 0.097 ? 0.994 1 11 3.320 3.500 2322 ? 1219 0 0.061 9.660 ? ? ? ? ? 1268 ? ? ? ? ? 96.100 0.081 ? 0.993 1 12 3.500 3.720 2131 ? 1128 0 0.055 10.970 ? ? ? ? ? 1174 ? ? ? ? ? 96.100 0.074 ? 0.988 1 13 3.720 3.970 2060 ? 1098 0 0.055 11.140 ? ? ? ? ? 1143 ? ? ? ? ? 96.100 0.074 ? 0.992 1 14 3.970 4.290 1834 ? 984 0 0.042 13.210 ? ? ? ? ? 1036 ? ? ? ? ? 95.000 0.057 ? 0.994 1 15 4.290 4.700 1662 ? 904 0 0.042 13.760 ? ? ? ? ? 941 ? ? ? ? ? 96.100 0.056 ? 0.994 1 16 4.700 5.260 1548 ? 830 0 0.036 15.910 ? ? ? ? ? 889 ? ? ? ? ? 93.400 0.049 ? 0.996 1 17 5.260 6.070 1328 ? 723 0 0.036 15.610 ? ? ? ? ? 759 ? ? ? ? ? 95.300 0.048 ? 0.993 1 18 6.070 7.430 1105 ? 592 0 0.036 14.570 ? ? ? ? ? 638 ? ? ? ? ? 92.800 0.048 ? 0.998 1 19 7.430 10.510 884 ? 464 0 0.027 18.790 ? ? ? ? ? 490 ? ? ? ? ? 94.700 0.036 ? 0.997 1 20 10.510 ? 431 ? 235 0 0.028 22.450 ? ? ? ? ? 280 ? ? ? ? ? 83.900 0.037 ? 0.996 # _refine.entry_id 5LYV _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 2.3500 _refine.ls_d_res_low 40.0000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.7500 _refine.ls_number_reflns_obs 12231 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2001 _refine.ls_R_factor_R_work 0.1985 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2317 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.0600 _refine.ls_number_reflns_R_free 497 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 58.0000 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -2.8347 _refine.aniso_B[2][2] 1.1589 _refine.aniso_B[3][3] 1.6757 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 3.2190 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9502 _refine.correlation_coeff_Fo_to_Fc_free 0.9437 _refine.overall_SU_R_Cruickshank_DPI 1.0230 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.2620 _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI 0.2840 _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 5LYS _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 126.560 _refine.B_iso_min 23.180 _refine.pdbx_overall_phase_error ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_R_factor_R_free_error_details ? # _refine_analyze.entry_id 5LYV _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_obs 0.335 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 2.3500 _refine_hist.d_res_low 40.0000 _refine_hist.pdbx_number_atoms_ligand 55 _refine_hist.number_atoms_solvent 242 _refine_hist.number_atoms_total 2677 _refine_hist.pdbx_number_residues_total 112 _refine_hist.pdbx_B_iso_mean_ligand 96.65 _refine_hist.pdbx_B_iso_mean_solvent 51.18 _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2380 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' t_dihedral_angle_d 629 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes ? ? ? ? ? 'X-RAY DIFFRACTION' t_gen_planes 125 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 2974 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd 1 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 500 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 3226 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 2974 0.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 4642 0.950 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 23.940 ? ? ? # _refine_ls_shell.d_res_high 2.3500 _refine_ls_shell.d_res_low 2.5700 _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.percent_reflns_obs 96.4000 _refine_ls_shell.number_reflns_R_work 2749 _refine_ls_shell.R_factor_all 0.2178 _refine_ls_shell.R_factor_R_work 0.2154 _refine_ls_shell.R_factor_R_free 0.2947 _refine_ls_shell.percent_reflns_R_free 3.1400 _refine_ls_shell.number_reflns_R_free 89 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2838 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_obs ? # _struct.entry_id 5LYV _struct.title ;The crystal structure of 7SK 5'-hairpin - Osmium derivative ; _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5LYV _struct_keywords.text 'non-coding RNA major groove base triple transcription, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? G N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 5LYV _struct_ref.pdbx_db_accession 5LYV _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5LYV A 1 ? 57 ? 5LYV 24 ? 101 ? 24 101 2 1 5LYV B 1 ? 57 ? 5LYV 24 ? 101 ? 24 101 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,F 2 1 B,D,E,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A C 56 "O3'" ? ? ? 1_555 A CCC 57 P ? ? A C 86 A CCC 101 1_555 ? ? ? ? ? ? ? 1.655 ? ? covale2 covale both ? B C 56 "O3'" ? ? ? 1_555 B CCC 57 P ? ? B C 86 B CCC 101 1_555 ? ? ? ? ? ? ? 1.641 ? ? metalc1 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 201 B HOH 344 1_555 ? ? ? ? ? ? ? 2.449 ? ? metalc2 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 201 B HOH 373 1_555 ? ? ? ? ? ? ? 1.946 ? ? metalc3 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 201 B HOH 417 1_555 ? ? ? ? ? ? ? 2.471 ? ? metalc4 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 201 B HOH 425 1_555 ? ? ? ? ? ? ? 2.337 ? ? metalc5 metalc ? ? D MG . MG ? ? ? 1_555 G HOH . O ? ? B MG 201 B HOH 433 1_555 ? ? ? ? ? ? ? 2.006 ? ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 A CCC 57 N3 ? ? A G 24 A CCC 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 A CCC 57 O2 ? ? A G 24 A CCC 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 A CCC 57 N4 ? ? A G 24 A CCC 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A G 2 N1 ? ? ? 1_555 A C 56 N3 ? ? A G 25 A C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 2 N2 ? ? ? 1_555 A C 56 O2 ? ? A G 25 A C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 2 O6 ? ? ? 1_555 A C 56 N4 ? ? A G 25 A C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 3 N1 ? ? ? 1_555 A C 55 N3 ? ? A G 26 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A G 3 N2 ? ? ? 1_555 A C 55 O2 ? ? A G 26 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A G 3 O6 ? ? ? 1_555 A C 55 N4 ? ? A G 26 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A A 4 N1 ? ? ? 1_555 A U 54 N3 ? ? A A 27 A U 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A A 4 N6 ? ? ? 1_555 A U 54 O4 ? ? A A 27 A U 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 5 N3 ? ? ? 1_555 A G 53 O6 ? ? A U 28 A G 83 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog13 hydrog ? ? A U 5 O2 ? ? ? 1_555 A G 53 N1 ? ? A U 28 A G 83 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog14 hydrog ? ? A C 6 N3 ? ? ? 1_555 A G 52 N1 ? ? A C 29 A G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A C 6 N4 ? ? ? 1_555 A G 52 O6 ? ? A C 29 A G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A C 6 O2 ? ? ? 1_555 A G 52 N2 ? ? A C 29 A G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A U 7 N3 ? ? ? 1_555 A G 51 O6 ? ? A U 30 A G 81 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog18 hydrog ? ? A U 7 O2 ? ? ? 1_555 A G 51 N1 ? ? A U 30 A G 81 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog19 hydrog ? ? A G 8 N7 ? ? ? 1_555 A A 47 N6 ? ? A G 31 A A 77 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog20 hydrog ? ? A G 8 N1 ? ? ? 1_555 A C 50 N3 ? ? A G 31 A C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 8 N2 ? ? ? 1_555 A C 50 O2 ? ? A G 31 A C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A G 8 O6 ? ? ? 1_555 A C 50 N4 ? ? A G 31 A C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A U 9 O4 ? ? ? 1_555 A A 47 N6 ? ? A U 32 A A 77 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog24 hydrog ? ? A U 9 N3 ? ? ? 1_555 A G 49 O6 ? ? A U 32 A G 79 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog25 hydrog ? ? A U 9 O2 ? ? ? 1_555 A G 49 N1 ? ? A U 32 A G 79 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog26 hydrog ? ? A C 10 N3 ? ? ? 1_555 A G 48 N1 ? ? A C 33 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A C 10 N4 ? ? ? 1_555 A G 48 O6 ? ? A C 33 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A C 10 O2 ? ? ? 1_555 A G 48 N2 ? ? A C 33 A G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A A 11 N6 ? ? ? 1_555 A G 39 N7 ? ? A A 34 A G 69 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog30 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 44 N1 A ? A C 35 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A C 12 N3 ? ? ? 1_555 A G 44 N1 B ? A C 35 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 44 O6 A ? A C 35 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 12 N4 ? ? ? 1_555 A G 44 O6 B ? A C 35 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 44 N2 A ? A C 35 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A C 12 O2 ? ? ? 1_555 A G 44 N2 B ? A C 35 A G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 43 N1 A ? A C 36 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A C 13 N3 ? ? ? 1_555 A G 43 N1 B ? A C 36 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 43 O6 A ? A C 36 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A C 13 N4 ? ? ? 1_555 A G 43 O6 B ? A C 36 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 43 N2 A ? A C 36 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A C 13 O2 ? ? ? 1_555 A G 43 N2 B ? A C 36 A G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A C 14 N3 ? ? ? 1_555 A G 40 N1 ? ? A C 37 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A C 14 N4 ? ? ? 1_555 A G 40 O6 ? ? A C 37 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A C 14 O2 ? ? ? 1_555 A G 40 N2 ? ? A C 37 A G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A C 15 N3 ? ? ? 1_555 A G 39 N1 ? ? A C 38 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A C 15 N4 ? ? ? 1_555 A G 39 O6 ? ? A C 38 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A C 15 O2 ? ? ? 1_555 A G 39 N2 ? ? A C 38 A G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A A 16 N1 A ? ? 1_555 A U 38 N3 ? ? A A 39 A U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A A 16 N1 B ? ? 1_555 A U 38 N3 ? ? A A 39 A U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A A 16 N6 A ? ? 1_555 A U 38 O4 ? ? A A 39 A U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A A 16 N6 B ? ? 1_555 A U 38 O4 ? ? A A 39 A U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? A U 17 N3 A ? ? 1_555 A A 20 N7 ? ? A U 40 A A 43 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog53 hydrog ? ? A U 17 O4 A ? ? 1_555 A A 20 N6 ? ? A U 40 A A 43 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog54 hydrog ? ? A G 19 O6 A ? ? 1_555 A U 33 N3 A ? A G 42 A U 63 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog55 hydrog ? ? A G 19 O6 B ? ? 1_555 A U 33 N3 B ? A G 42 A U 63 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog56 hydrog ? ? A G 19 N1 A ? ? 1_555 A C 37 N3 ? ? A G 42 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A G 19 N1 B ? ? 1_555 A C 37 N3 ? ? A G 42 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A G 19 N2 A ? ? 1_555 A C 37 O2 ? ? A G 42 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A G 19 N2 B ? ? 1_555 A C 37 O2 ? ? A G 42 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A G 19 O6 A ? ? 1_555 A C 37 N4 ? ? A G 42 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A G 19 O6 B ? ? 1_555 A C 37 N4 ? ? A G 42 A C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A A 20 N1 ? ? ? 1_555 A U 36 N3 ? ? A A 43 A U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A A 20 N6 ? ? ? 1_555 A U 36 O4 ? ? A A 43 A U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A U 21 N3 ? ? ? 1_555 A A 35 N1 ? ? A U 44 A A 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A U 21 O4 ? ? ? 1_555 A A 35 N6 ? ? A U 44 A A 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A C 22 N3 ? ? ? 1_555 A G 34 N1 A ? A C 45 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A C 22 N3 ? ? ? 1_555 A G 34 N1 B ? A C 45 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 22 N4 ? ? ? 1_555 A G 34 O6 A ? A C 45 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? A C 22 N4 ? ? ? 1_555 A G 34 O6 B ? A C 45 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 22 O2 ? ? ? 1_555 A G 34 N2 A ? A C 45 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 22 O2 ? ? ? 1_555 A G 34 N2 B ? A C 45 A G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 32 N3 A ? A G 46 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog73 hydrog ? ? A G 23 N1 ? ? ? 1_555 A C 32 N3 B ? A G 46 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog74 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 32 O2 A ? A G 46 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog75 hydrog ? ? A G 23 N2 ? ? ? 1_555 A C 32 O2 B ? A G 46 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 32 N4 A ? A G 46 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 23 O6 ? ? ? 1_555 A C 32 N4 B ? A G 46 A C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A C 24 N3 ? ? ? 1_555 A G 31 N1 ? ? A C 47 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A C 24 N4 ? ? ? 1_555 A G 31 O6 ? ? A C 47 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A C 24 O2 ? ? ? 1_555 A G 31 N2 ? ? A C 47 A G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A C 25 N3 ? ? ? 1_555 A G 30 N1 ? ? A C 48 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A C 25 N4 ? ? ? 1_555 A G 30 O6 ? ? A C 48 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A C 25 O2 ? ? ? 1_555 A G 30 N2 ? ? A C 48 A G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A U 26 O2 ? A ? 1_555 A G 29 N1 ? D A U 48 A G 48 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog85 hydrog ? ? A U 33 O2 A ? ? 1_555 A C 37 N4 ? ? A U 63 A C 67 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog86 hydrog ? ? A U 33 O2 B ? ? 1_555 A C 37 N4 ? ? A U 63 A C 67 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog87 hydrog ? ? A C 41 N4 A ? ? 1_555 A G 44 O6 A ? A C 71 A G 74 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog88 hydrog ? ? A C 41 N4 B ? ? 1_555 A G 44 O6 B ? A C 71 A G 74 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog89 hydrog ? ? A C 45 N4 ? ? ? 1_555 A G 48 O6 ? ? A C 75 A G 78 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog90 hydrog ? ? B G 1 N1 ? ? ? 1_555 B CCC 57 N3 ? ? B G 24 B CCC 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? B G 1 N2 ? ? ? 1_555 B CCC 57 O2 ? ? B G 24 B CCC 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? B G 1 O6 ? ? ? 1_555 B CCC 57 N4 ? ? B G 24 B CCC 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? B G 2 N1 ? ? ? 1_555 B C 56 N3 ? ? B G 25 B C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? B G 2 N2 ? ? ? 1_555 B C 56 O2 ? ? B G 25 B C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? B G 2 O6 ? ? ? 1_555 B C 56 N4 ? ? B G 25 B C 86 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? B G 3 N1 ? ? ? 1_555 B C 55 N3 ? ? B G 26 B C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? B G 3 N2 ? ? ? 1_555 B C 55 O2 ? ? B G 26 B C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? B G 3 O6 ? ? ? 1_555 B C 55 N4 ? ? B G 26 B C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? B A 4 N1 ? ? ? 1_555 B U 54 N3 ? ? B A 27 B U 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? B A 4 N6 ? ? ? 1_555 B U 54 O4 ? ? B A 27 B U 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? B U 5 N3 ? ? ? 1_555 B G 53 O6 ? ? B U 28 B G 83 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog102 hydrog ? ? B U 5 O2 ? ? ? 1_555 B G 53 N1 ? ? B U 28 B G 83 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog103 hydrog ? ? B C 6 N3 ? ? ? 1_555 B G 52 N1 ? ? B C 29 B G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? B C 6 N4 ? ? ? 1_555 B G 52 O6 ? ? B C 29 B G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? B C 6 O2 ? ? ? 1_555 B G 52 N2 ? ? B C 29 B G 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? B U 7 N3 ? ? ? 1_555 B G 51 O6 ? ? B U 30 B G 81 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog107 hydrog ? ? B U 7 O2 ? ? ? 1_555 B G 51 N1 ? ? B U 30 B G 81 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog108 hydrog ? ? B G 8 N7 ? ? ? 1_555 B A 47 N6 ? ? B G 31 B A 77 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog109 hydrog ? ? B G 8 N1 ? ? ? 1_555 B C 50 N3 ? ? B G 31 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog110 hydrog ? ? B G 8 N2 ? ? ? 1_555 B C 50 O2 ? ? B G 31 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog111 hydrog ? ? B G 8 O6 ? ? ? 1_555 B C 50 N4 ? ? B G 31 B C 80 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog112 hydrog ? ? B U 9 O4 ? ? ? 1_555 B A 47 N6 ? ? B U 32 B A 77 1_555 ? ? ? ? ? ? 'U-A PAIR' ? ? ? hydrog113 hydrog ? ? B U 9 N3 ? ? ? 1_555 B G 49 O6 ? ? B U 32 B G 79 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog114 hydrog ? ? B U 9 O2 ? ? ? 1_555 B G 49 N1 ? ? B U 32 B G 79 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog115 hydrog ? ? B C 10 N3 ? ? ? 1_555 B G 48 N1 ? ? B C 33 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog116 hydrog ? ? B C 10 N4 ? ? ? 1_555 B G 48 O6 ? ? B C 33 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog117 hydrog ? ? B C 10 O2 ? ? ? 1_555 B G 48 N2 ? ? B C 33 B G 78 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog118 hydrog ? ? B A 11 N6 ? ? ? 1_555 B G 39 N7 ? ? B A 34 B G 69 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog119 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 44 N1 ? ? B C 35 B G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog120 hydrog ? ? B C 12 N4 ? ? ? 1_555 B G 44 O6 ? ? B C 35 B G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog121 hydrog ? ? B C 12 O2 ? ? ? 1_555 B G 44 N2 ? ? B C 35 B G 74 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog122 hydrog ? ? B C 13 N3 ? ? ? 1_555 B G 43 N1 ? ? B C 36 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog123 hydrog ? ? B C 13 N4 ? ? ? 1_555 B G 43 O6 ? ? B C 36 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog124 hydrog ? ? B C 13 O2 ? ? ? 1_555 B G 43 N2 ? ? B C 36 B G 73 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog125 hydrog ? ? B C 14 N3 ? ? ? 1_555 B G 40 N1 ? ? B C 37 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog126 hydrog ? ? B C 14 N4 ? ? ? 1_555 B G 40 O6 ? ? B C 37 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog127 hydrog ? ? B C 14 O2 ? ? ? 1_555 B G 40 N2 ? ? B C 37 B G 70 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog128 hydrog ? ? B C 15 N3 ? ? ? 1_555 B G 39 N1 ? ? B C 38 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog129 hydrog ? ? B C 15 N4 ? ? ? 1_555 B G 39 O6 ? ? B C 38 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog130 hydrog ? ? B C 15 O2 ? ? ? 1_555 B G 39 N2 ? ? B C 38 B G 69 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog131 hydrog ? ? B A 16 N1 ? ? ? 1_555 B U 38 N3 ? ? B A 39 B U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog132 hydrog ? ? B A 16 N6 ? ? ? 1_555 B U 38 O4 ? ? B A 39 B U 68 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog133 hydrog ? ? B U 17 N3 ? ? ? 1_555 B A 20 N7 ? ? B U 40 B A 43 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog134 hydrog ? ? B U 17 O4 ? ? ? 1_555 B A 20 N6 ? ? B U 40 B A 43 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog135 hydrog ? ? B G 19 O6 ? ? ? 1_555 B U 33 N3 ? ? B G 42 B U 63 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? hydrog136 hydrog ? ? B G 19 N1 ? ? ? 1_555 B C 37 N3 ? ? B G 42 B C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog137 hydrog ? ? B G 19 N2 ? ? ? 1_555 B C 37 O2 ? ? B G 42 B C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog138 hydrog ? ? B G 19 O6 ? ? ? 1_555 B C 37 N4 ? ? B G 42 B C 67 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog139 hydrog ? ? B A 20 N1 ? ? ? 1_555 B U 36 N3 ? ? B A 43 B U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog140 hydrog ? ? B A 20 N6 ? ? ? 1_555 B U 36 O4 ? ? B A 43 B U 66 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog141 hydrog ? ? B U 21 N3 ? ? ? 1_555 B A 35 N1 ? ? B U 44 B A 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog142 hydrog ? ? B U 21 O4 ? ? ? 1_555 B A 35 N6 ? ? B U 44 B A 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog143 hydrog ? ? B C 22 N3 ? ? ? 1_555 B G 34 N1 ? ? B C 45 B G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog144 hydrog ? ? B C 22 N4 ? ? ? 1_555 B G 34 O6 ? ? B C 45 B G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog145 hydrog ? ? B C 22 O2 ? ? ? 1_555 B G 34 N2 ? ? B C 45 B G 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog146 hydrog ? ? B G 23 N1 ? ? ? 1_555 B C 32 N3 ? ? B G 46 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog147 hydrog ? ? B G 23 N2 ? ? ? 1_555 B C 32 O2 ? ? B G 46 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog148 hydrog ? ? B G 23 O6 ? ? ? 1_555 B C 32 N4 ? ? B G 46 B C 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog149 hydrog ? ? B C 24 N3 ? ? ? 1_555 B G 31 N1 ? ? B C 47 B G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog150 hydrog ? ? B C 24 N4 ? ? ? 1_555 B G 31 O6 ? ? B C 47 B G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog151 hydrog ? ? B C 24 O2 ? ? ? 1_555 B G 31 N2 ? ? B C 47 B G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog152 hydrog ? ? B C 25 N3 ? ? ? 1_555 B G 30 N1 ? ? B C 48 B G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog153 hydrog ? ? B C 25 N4 ? ? ? 1_555 B G 30 O6 ? ? B C 48 B G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog154 hydrog ? ? B C 25 O2 ? ? ? 1_555 B G 30 N2 ? ? B C 48 B G 60 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog155 hydrog ? ? B U 26 O2 ? A ? 1_555 B G 29 N1 ? D B U 48 B G 48 1_555 ? ? ? ? ? ? 'U-G MISPAIR' ? ? ? hydrog156 hydrog ? ? B U 33 O2 ? ? ? 1_555 B C 37 N4 ? ? B U 63 B C 67 1_555 ? ? ? ? ? ? 'U-C MISPAIR' ? ? ? hydrog157 hydrog ? ? B C 41 N4 ? ? ? 1_555 B G 44 O6 ? ? B C 71 B G 74 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog158 hydrog ? ? B C 45 N4 ? ? ? 1_555 B G 48 O6 ? ? B C 75 B G 78 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? G HOH . ? B HOH 344 ? 1_555 MG ? D MG . ? B MG 201 ? 1_555 O ? G HOH . ? B HOH 373 ? 1_555 98.4 ? 2 O ? G HOH . ? B HOH 344 ? 1_555 MG ? D MG . ? B MG 201 ? 1_555 O ? G HOH . ? B HOH 417 ? 1_555 90.1 ? 3 O ? G HOH . ? B HOH 373 ? 1_555 MG ? D MG . ? B MG 201 ? 1_555 O ? G HOH . ? B HOH 417 ? 1_555 74.2 ? 4 O ? G HOH . ? B HOH 344 ? 1_555 MG ? D MG . ? B MG 201 ? 1_555 O ? G HOH . ? B HOH 425 ? 1_555 92.6 ? 5 O ? G HOH . ? B HOH 373 ? 1_555 MG ? D MG . ? B MG 201 ? 1_555 O ? G HOH . ? B HOH 425 ? 1_555 165.9 ? 6 O ? G HOH . ? B HOH 417 ? 1_555 MG ? D MG . ? B MG 201 ? 1_555 O ? G HOH . ? B HOH 425 ? 1_555 97.3 ? 7 O ? G HOH . ? B HOH 344 ? 1_555 MG ? D MG . ? B MG 201 ? 1_555 O ? G HOH . ? B HOH 433 ? 1_555 98.4 ? 8 O ? G HOH . ? B HOH 373 ? 1_555 MG ? D MG . ? B MG 201 ? 1_555 O ? G HOH . ? B HOH 433 ? 1_555 109.1 ? 9 O ? G HOH . ? B HOH 417 ? 1_555 MG ? D MG . ? B MG 201 ? 1_555 O ? G HOH . ? B HOH 433 ? 1_555 170.2 ? 10 O ? G HOH . ? B HOH 425 ? 1_555 MG ? D MG . ? B MG 201 ? 1_555 O ? G HOH . ? B HOH 433 ? 1_555 77.6 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CCC 101 ? 5 'binding site for residue CCC A 101' AC2 Software A OHX 201 ? 5 'binding site for residue OHX A 201' AC3 Software B MG 201 ? 6 'binding site for residue MG B 201' AC4 Software B CL 202 ? 1 'binding site for residue CL B 202' AC5 Software B CCC 101 ? 9 'binding site for Di-nucleotide CCC B 101 and C B 86' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 G A 1 ? G A 24 . ? 1_555 ? 2 AC1 5 G A 2 ? G A 25 . ? 1_555 ? 3 AC1 5 C A 56 ? C A 86 . ? 1_555 ? 4 AC1 5 HOH F . ? HOH A 328 . ? 1_555 ? 5 AC1 5 G B 1 ? G B 24 . ? 1_554 ? 6 AC2 5 A A 16 ? A A 39 . ? 1_555 ? 7 AC2 5 U A 33 ? U A 63 . ? 1_555 ? 8 AC2 5 HOH F . ? HOH A 341 . ? 1_555 ? 9 AC2 5 HOH F . ? HOH A 371 . ? 1_555 ? 10 AC2 5 U B 46 ? U B 76 . ? 1_655 ? 11 AC3 6 HOH G . ? HOH B 344 . ? 1_555 ? 12 AC3 6 HOH G . ? HOH B 373 . ? 1_555 ? 13 AC3 6 HOH G . ? HOH B 407 . ? 1_555 ? 14 AC3 6 HOH G . ? HOH B 417 . ? 1_555 ? 15 AC3 6 HOH G . ? HOH B 425 . ? 1_555 ? 16 AC3 6 HOH G . ? HOH B 433 . ? 1_555 ? 17 AC4 1 G B 51 ? G B 81 . ? 1_555 ? 18 AC5 9 G A 1 ? G A 24 . ? 1_556 ? 19 AC5 9 G B 1 ? G B 24 . ? 1_555 ? 20 AC5 9 G B 2 ? G B 25 . ? 1_555 ? 21 AC5 9 G B 3 ? G B 26 . ? 1_555 ? 22 AC5 9 C B 55 ? C B 85 . ? 1_555 ? 23 AC5 9 HOH G . ? HOH B 335 . ? 1_555 ? 24 AC5 9 HOH G . ? HOH B 346 . ? 1_555 ? 25 AC5 9 HOH G . ? HOH B 386 . ? 1_555 ? 26 AC5 9 HOH G . ? HOH B 388 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P A G 24 ? ? OP3 A G 24 ? ? 1.488 1.607 -0.119 0.012 N 2 1 P B G 24 ? ? OP3 B G 24 ? ? 1.485 1.607 -0.122 0.012 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OP1 A G 24 ? ? P A G 24 ? ? OP2 A G 24 ? ? 110.01 119.60 -9.59 1.50 N 2 1 "O3'" A C 86 ? ? P A CCC 101 ? ? OP2 A CCC 101 ? ? 120.53 110.50 10.03 1.10 Y 3 1 OP1 B G 24 ? ? P B G 24 ? ? OP2 B G 24 ? ? 109.85 119.60 -9.75 1.50 N 4 1 "C3'" B C 86 ? ? "O3'" B C 86 ? ? P B CCC 101 ? ? 108.36 119.70 -11.34 1.20 Y 5 1 "O3'" B C 86 ? ? P B CCC 101 ? ? OP2 B CCC 101 ? ? 128.01 110.50 17.51 1.10 Y 6 1 "O3'" B C 86 ? ? P B CCC 101 ? ? OP1 B CCC 101 ? ? 83.91 105.20 -21.29 2.20 Y # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 7.3088 0.3158 33.5830 -0.2311 -0.1659 -0.0907 -0.0304 -0.0908 0.0403 2.3851 2.1312 4.4525 0.1114 -0.5798 -0.6278 0.1664 -0.1299 -0.0365 0.0174 -0.0302 -0.3478 0.0048 -0.1625 0.5491 'X-RAY DIFFRACTION' 2 ? refined -17.2023 0.2301 32.9947 -0.1982 -0.1598 -0.1635 -0.0310 -0.0623 0.0016 2.8052 1.9789 3.2742 -0.4647 -0.5533 -0.1177 0.1042 0.0579 -0.1621 -0.1188 -0.2449 0.2180 -0.0476 0.1909 -0.2757 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 24 A 87 '{ A|24 - A|86 }' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 24 B 87 '{ B|24 - B|86 }' ? ? ? ? ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 C OP3 O N N 38 C P P N N 39 C OP1 O N N 40 C OP2 O N N 41 C "O5'" O N N 42 C "C5'" C N N 43 C "C4'" C N R 44 C "O4'" O N N 45 C "C3'" C N S 46 C "O3'" O N N 47 C "C2'" C N R 48 C "O2'" O N N 49 C "C1'" C N R 50 C N1 N N N 51 C C2 C N N 52 C O2 O N N 53 C N3 N N N 54 C C4 C N N 55 C N4 N N N 56 C C5 C N N 57 C C6 C N N 58 C HOP3 H N N 59 C HOP2 H N N 60 C "H5'" H N N 61 C "H5''" H N N 62 C "H4'" H N N 63 C "H3'" H N N 64 C "HO3'" H N N 65 C "H2'" H N N 66 C "HO2'" H N N 67 C "H1'" H N N 68 C H41 H N N 69 C H42 H N N 70 C H5 H N N 71 C H6 H N N 72 CCC PC P N S 73 CCC O1C O N N 74 CCC O2C O N N 75 CCC P P N N 76 CCC OP1 O N N 77 CCC OP2 O N N 78 CCC OP3 O N N 79 CCC "O5'" O N N 80 CCC "C5'" C N N 81 CCC "C4'" C N R 82 CCC "O4'" O N N 83 CCC "C3'" C N R 84 CCC "O3'" O N N 85 CCC "C2'" C N R 86 CCC "O2'" O N N 87 CCC "C1'" C N R 88 CCC N1 N N N 89 CCC C2 C N N 90 CCC O2 O N N 91 CCC N3 N N N 92 CCC C4 C N N 93 CCC N4 N N N 94 CCC C5 C N N 95 CCC C6 C N N 96 CCC HOC2 H N N 97 CCC HOP2 H N N 98 CCC HOP3 H N N 99 CCC "H5'" H N N 100 CCC "H5''" H N N 101 CCC "H4'" H N N 102 CCC "H3'" H N N 103 CCC "H2'" H N N 104 CCC "H1'" H N N 105 CCC H41 H N N 106 CCC H42 H N N 107 CCC H5 H N N 108 CCC H6 H N N 109 CL CL CL N N 110 G OP3 O N N 111 G P P N N 112 G OP1 O N N 113 G OP2 O N N 114 G "O5'" O N N 115 G "C5'" C N N 116 G "C4'" C N R 117 G "O4'" O N N 118 G "C3'" C N S 119 G "O3'" O N N 120 G "C2'" C N R 121 G "O2'" O N N 122 G "C1'" C N R 123 G N9 N Y N 124 G C8 C Y N 125 G N7 N Y N 126 G C5 C Y N 127 G C6 C N N 128 G O6 O N N 129 G N1 N N N 130 G C2 C N N 131 G N2 N N N 132 G N3 N N N 133 G C4 C Y N 134 G HOP3 H N N 135 G HOP2 H N N 136 G "H5'" H N N 137 G "H5''" H N N 138 G "H4'" H N N 139 G "H3'" H N N 140 G "HO3'" H N N 141 G "H2'" H N N 142 G "HO2'" H N N 143 G "H1'" H N N 144 G H8 H N N 145 G H1 H N N 146 G H21 H N N 147 G H22 H N N 148 HOH O O N N 149 HOH H1 H N N 150 HOH H2 H N N 151 MG MG MG N N 152 OHX OS OS N N 153 OHX N1 N N N 154 OHX N2 N N N 155 OHX N3 N N N 156 OHX N4 N N N 157 OHX N5 N N N 158 OHX N6 N N N 159 OHX HN1 H N N 160 OHX HN1A H N N 161 OHX HN2 H N N 162 OHX HN2A H N N 163 OHX HN3 H N N 164 OHX HN3A H N N 165 OHX HN4 H N N 166 OHX HN4A H N N 167 OHX HN5 H N N 168 OHX HN5A H N N 169 OHX HN6 H N N 170 OHX HN6A H N N 171 U OP3 O N N 172 U P P N N 173 U OP1 O N N 174 U OP2 O N N 175 U "O5'" O N N 176 U "C5'" C N N 177 U "C4'" C N R 178 U "O4'" O N N 179 U "C3'" C N S 180 U "O3'" O N N 181 U "C2'" C N R 182 U "O2'" O N N 183 U "C1'" C N R 184 U N1 N N N 185 U C2 C N N 186 U O2 O N N 187 U N3 N N N 188 U C4 C N N 189 U O4 O N N 190 U C5 C N N 191 U C6 C N N 192 U HOP3 H N N 193 U HOP2 H N N 194 U "H5'" H N N 195 U "H5''" H N N 196 U "H4'" H N N 197 U "H3'" H N N 198 U "HO3'" H N N 199 U "H2'" H N N 200 U "HO2'" H N N 201 U "H1'" H N N 202 U H3 H N N 203 U H5 H N N 204 U H6 H N N 205 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 C OP3 P sing N N 40 C OP3 HOP3 sing N N 41 C P OP1 doub N N 42 C P OP2 sing N N 43 C P "O5'" sing N N 44 C OP2 HOP2 sing N N 45 C "O5'" "C5'" sing N N 46 C "C5'" "C4'" sing N N 47 C "C5'" "H5'" sing N N 48 C "C5'" "H5''" sing N N 49 C "C4'" "O4'" sing N N 50 C "C4'" "C3'" sing N N 51 C "C4'" "H4'" sing N N 52 C "O4'" "C1'" sing N N 53 C "C3'" "O3'" sing N N 54 C "C3'" "C2'" sing N N 55 C "C3'" "H3'" sing N N 56 C "O3'" "HO3'" sing N N 57 C "C2'" "O2'" sing N N 58 C "C2'" "C1'" sing N N 59 C "C2'" "H2'" sing N N 60 C "O2'" "HO2'" sing N N 61 C "C1'" N1 sing N N 62 C "C1'" "H1'" sing N N 63 C N1 C2 sing N N 64 C N1 C6 sing N N 65 C C2 O2 doub N N 66 C C2 N3 sing N N 67 C N3 C4 doub N N 68 C C4 N4 sing N N 69 C C4 C5 sing N N 70 C N4 H41 sing N N 71 C N4 H42 sing N N 72 C C5 C6 doub N N 73 C C5 H5 sing N N 74 C C6 H6 sing N N 75 CCC PC O1C doub N N 76 CCC PC O2C sing N N 77 CCC PC "O3'" sing N N 78 CCC PC "O2'" sing N N 79 CCC O2C HOC2 sing N N 80 CCC P OP1 doub N N 81 CCC P OP2 sing N N 82 CCC P OP3 sing N N 83 CCC P "O5'" sing N N 84 CCC OP2 HOP2 sing N N 85 CCC OP3 HOP3 sing N N 86 CCC "O5'" "C5'" sing N N 87 CCC "C5'" "C4'" sing N N 88 CCC "C5'" "H5'" sing N N 89 CCC "C5'" "H5''" sing N N 90 CCC "C4'" "O4'" sing N N 91 CCC "C4'" "C3'" sing N N 92 CCC "C4'" "H4'" sing N N 93 CCC "O4'" "C1'" sing N N 94 CCC "C3'" "O3'" sing N N 95 CCC "C3'" "C2'" sing N N 96 CCC "C3'" "H3'" sing N N 97 CCC "C2'" "O2'" sing N N 98 CCC "C2'" "C1'" sing N N 99 CCC "C2'" "H2'" sing N N 100 CCC "C1'" N1 sing N N 101 CCC "C1'" "H1'" sing N N 102 CCC N1 C2 sing N N 103 CCC N1 C6 sing N N 104 CCC C2 O2 doub N N 105 CCC C2 N3 sing N N 106 CCC N3 C4 doub N N 107 CCC C4 N4 sing N N 108 CCC C4 C5 sing N N 109 CCC N4 H41 sing N N 110 CCC N4 H42 sing N N 111 CCC C5 C6 doub N N 112 CCC C5 H5 sing N N 113 CCC C6 H6 sing N N 114 G OP3 P sing N N 115 G OP3 HOP3 sing N N 116 G P OP1 doub N N 117 G P OP2 sing N N 118 G P "O5'" sing N N 119 G OP2 HOP2 sing N N 120 G "O5'" "C5'" sing N N 121 G "C5'" "C4'" sing N N 122 G "C5'" "H5'" sing N N 123 G "C5'" "H5''" sing N N 124 G "C4'" "O4'" sing N N 125 G "C4'" "C3'" sing N N 126 G "C4'" "H4'" sing N N 127 G "O4'" "C1'" sing N N 128 G "C3'" "O3'" sing N N 129 G "C3'" "C2'" sing N N 130 G "C3'" "H3'" sing N N 131 G "O3'" "HO3'" sing N N 132 G "C2'" "O2'" sing N N 133 G "C2'" "C1'" sing N N 134 G "C2'" "H2'" sing N N 135 G "O2'" "HO2'" sing N N 136 G "C1'" N9 sing N N 137 G "C1'" "H1'" sing N N 138 G N9 C8 sing Y N 139 G N9 C4 sing Y N 140 G C8 N7 doub Y N 141 G C8 H8 sing N N 142 G N7 C5 sing Y N 143 G C5 C6 sing N N 144 G C5 C4 doub Y N 145 G C6 O6 doub N N 146 G C6 N1 sing N N 147 G N1 C2 sing N N 148 G N1 H1 sing N N 149 G C2 N2 sing N N 150 G C2 N3 doub N N 151 G N2 H21 sing N N 152 G N2 H22 sing N N 153 G N3 C4 sing N N 154 HOH O H1 sing N N 155 HOH O H2 sing N N 156 OHX N2 OS sing N N 157 OHX N1 OS sing N N 158 OHX N5 OS sing N N 159 OHX OS N4 sing N N 160 OHX OS N6 sing N N 161 OHX OS N3 sing N N 162 OHX N1 HN1 sing N N 163 OHX N1 HN1A sing N N 164 OHX N2 HN2 sing N N 165 OHX N2 HN2A sing N N 166 OHX N3 HN3 sing N N 167 OHX N3 HN3A sing N N 168 OHX N4 HN4 sing N N 169 OHX N4 HN4A sing N N 170 OHX N5 HN5 sing N N 171 OHX N5 HN5A sing N N 172 OHX N6 HN6 sing N N 173 OHX N6 HN6A sing N N 174 U OP3 P sing N N 175 U OP3 HOP3 sing N N 176 U P OP1 doub N N 177 U P OP2 sing N N 178 U P "O5'" sing N N 179 U OP2 HOP2 sing N N 180 U "O5'" "C5'" sing N N 181 U "C5'" "C4'" sing N N 182 U "C5'" "H5'" sing N N 183 U "C5'" "H5''" sing N N 184 U "C4'" "O4'" sing N N 185 U "C4'" "C3'" sing N N 186 U "C4'" "H4'" sing N N 187 U "O4'" "C1'" sing N N 188 U "C3'" "O3'" sing N N 189 U "C3'" "C2'" sing N N 190 U "C3'" "H3'" sing N N 191 U "O3'" "HO3'" sing N N 192 U "C2'" "O2'" sing N N 193 U "C2'" "C1'" sing N N 194 U "C2'" "H2'" sing N N 195 U "O2'" "HO2'" sing N N 196 U "C1'" N1 sing N N 197 U "C1'" "H1'" sing N N 198 U N1 C2 sing N N 199 U N1 C6 sing N N 200 U C2 O2 doub N N 201 U C2 N3 sing N N 202 U N3 C4 sing N N 203 U N3 H3 sing N N 204 U C4 O4 doub N N 205 U C4 C5 sing N N 206 U C5 C6 doub N N 207 U C5 H5 sing N N 208 U C6 H6 sing N N 209 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 5LYV 'double helix' 5LYV 'a-form double helix' 5LYV tetraloop 5LYV 'bulge loop' 5LYV 'mismatched base pair' 5LYV 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 A CCC 57 1_555 -0.336 -0.164 0.023 -1.173 -12.167 -2.792 1 A_G24:CCC101_A A 24 ? A 101 ? 19 1 1 A G 2 1_555 A C 56 1_555 -0.450 -0.144 -0.296 -8.151 -15.108 1.647 2 A_G25:C86_A A 25 ? A 86 ? 19 1 1 A G 3 1_555 A C 55 1_555 0.214 -0.138 0.016 -14.025 -13.842 -3.236 3 A_G26:C85_A A 26 ? A 85 ? 19 1 1 A A 4 1_555 A U 54 1_555 0.164 -0.060 0.351 -6.781 -17.739 4.212 4 A_A27:U84_A A 27 ? A 84 ? 20 1 1 A U 5 1_555 A G 53 1_555 1.963 -0.396 0.497 -5.591 -12.864 4.160 5 A_U28:G83_A A 28 ? A 83 ? 28 1 1 A C 6 1_555 A G 52 1_555 0.555 -0.140 -0.090 1.399 -12.971 1.995 6 A_C29:G82_A A 29 ? A 82 ? 19 1 1 A U 7 1_555 A G 51 1_555 2.222 -0.566 0.116 -0.722 -10.977 -0.748 7 A_U30:G81_A A 30 ? A 81 ? 28 1 1 A G 8 1_555 A C 50 1_555 -0.497 -0.286 0.104 -3.042 -13.135 -1.932 8 A_G31:C80_A A 31 ? A 80 ? 19 1 1 A U 9 1_555 A G 49 1_555 2.375 -0.615 0.302 -0.866 -15.396 -1.228 9 A_U32:G79_A A 32 ? A 79 ? 28 1 1 A C 10 1_555 A G 48 1_555 0.056 -0.144 0.101 3.603 -10.750 -1.313 10 A_C33:G78_A A 33 ? A 78 ? 19 1 1 A C 12 1_555 A G 44 1_555 0.332 -0.152 -0.166 13.906 0.561 -1.049 11 A_C35:G74_A A 35 ? A 74 ? 19 1 1 A C 13 1_555 A G 43 1_555 0.187 0.101 -0.363 18.134 -12.325 4.056 12 A_C36:G73_A A 36 ? A 73 ? 19 1 1 A C 14 1_555 A G 40 1_555 0.318 -0.267 -0.127 10.116 -17.813 0.478 13 A_C37:G70_A A 37 ? A 70 ? 19 1 1 A C 15 1_555 A G 39 1_555 0.486 -0.270 0.120 0.956 -10.113 -0.953 14 A_C38:G69_A A 38 ? A 69 ? 19 1 1 A A 16 1_555 A U 38 1_555 0.187 -0.156 -0.067 0.374 -18.337 4.409 15 A_A39:U68_A A 39 ? A 68 ? 20 1 1 A G 19 1_555 A C 37 1_555 -0.073 0.080 -0.332 -17.233 -8.467 5.255 16 A_G42:C67_A A 42 ? A 67 ? 19 1 1 A A 20 1_555 A U 36 1_555 -0.292 -0.142 -0.140 -2.816 -11.885 0.420 17 A_A43:U66_A A 43 ? A 66 ? 20 1 1 A U 21 1_555 A A 35 1_555 0.213 -0.068 -0.240 10.364 -12.519 6.945 18 A_U44:A65_A A 44 ? A 65 ? 20 1 1 A C 22 1_555 A G 34 1_555 0.471 0.030 -0.174 7.781 -9.730 4.233 19 A_C45:G64_A A 45 ? A 64 ? 19 1 1 A G 23 1_555 A C 32 1_555 -0.630 -0.317 0.123 7.013 -6.511 -1.889 20 A_G46:C62_A A 46 ? A 62 ? 19 1 1 A C 24 1_555 A G 31 1_555 0.315 -0.164 -0.007 8.953 -10.814 1.409 21 A_C47:G61_A A 47 ? A 61 ? 19 1 1 A C 25 1_555 A G 30 1_555 0.825 -0.273 -0.211 4.564 -5.273 1.879 22 A_C48:G60_A A 48 ? A 60 ? 19 1 1 A U 26 1_555 A G 29 1_555 1.319 -5.253 -0.054 -2.487 -6.559 -102.707 23 A_U48A:G48D_A A 48 A A 48 D ? 6 1 B G 1 1_555 B CCC 57 1_555 -0.344 -0.171 -0.173 -2.603 -11.416 -2.197 24 B_G24:CCC101_B B 24 ? B 101 ? 19 1 1 B G 2 1_555 B C 56 1_555 -0.417 -0.112 -0.231 -7.646 -12.576 0.517 25 B_G25:C86_B B 25 ? B 86 ? 19 1 1 B G 3 1_555 B C 55 1_555 0.003 -0.167 0.011 -16.242 -14.214 -2.093 26 B_G26:C85_B B 26 ? B 85 ? 19 1 1 B A 4 1_555 B U 54 1_555 -0.605 -0.279 0.227 -7.429 -16.036 4.229 27 B_A27:U84_B B 27 ? B 84 ? 20 1 1 B U 5 1_555 B G 53 1_555 2.016 -0.240 0.215 -1.277 -13.252 6.263 28 B_U28:G83_B B 28 ? B 83 ? 28 1 1 B C 6 1_555 B G 52 1_555 0.550 -0.137 -0.128 2.046 -12.975 2.051 29 B_C29:G82_B B 29 ? B 82 ? 19 1 1 B U 7 1_555 B G 51 1_555 2.222 -0.563 0.115 -0.753 -10.755 -0.593 30 B_U30:G81_B B 30 ? B 81 ? 28 1 1 B G 8 1_555 B C 50 1_555 -0.504 -0.278 0.094 -3.192 -13.174 -1.799 31 B_G31:C80_B B 31 ? B 80 ? 19 1 1 B U 9 1_555 B G 49 1_555 2.376 -0.627 0.297 -0.793 -15.514 -1.237 32 B_U32:G79_B B 32 ? B 79 ? 28 1 1 B C 10 1_555 B G 48 1_555 0.045 -0.151 0.133 3.752 -10.294 -1.781 33 B_C33:G78_B B 33 ? B 78 ? 19 1 1 B C 12 1_555 B G 44 1_555 0.268 0.152 -0.120 12.109 -1.403 0.711 34 B_C35:G74_B B 35 ? B 74 ? 19 1 1 B C 13 1_555 B G 43 1_555 0.319 -0.252 -0.479 18.510 -7.476 -0.146 35 B_C36:G73_B B 36 ? B 73 ? 19 1 1 B C 14 1_555 B G 40 1_555 0.273 -0.208 -0.146 12.459 -17.698 -0.297 36 B_C37:G70_B B 37 ? B 70 ? 19 1 1 B C 15 1_555 B G 39 1_555 0.439 -0.295 0.080 2.810 -11.631 -1.509 37 B_C38:G69_B B 38 ? B 69 ? 19 1 1 B A 16 1_555 B U 38 1_555 -0.088 -0.095 -0.052 -4.756 -20.086 3.874 38 B_A39:U68_B B 39 ? B 68 ? 20 1 1 B G 19 1_555 B C 37 1_555 -0.274 0.039 -0.283 -17.344 -9.768 4.340 39 B_G42:C67_B B 42 ? B 67 ? 19 1 1 B A 20 1_555 B U 36 1_555 -0.267 -0.133 -0.119 -1.898 -12.607 -0.520 40 B_A43:U66_B B 43 ? B 66 ? 20 1 1 B U 21 1_555 B A 35 1_555 0.210 -0.095 -0.236 10.474 -13.214 5.823 41 B_U44:A65_B B 44 ? B 65 ? 20 1 1 B C 22 1_555 B G 34 1_555 0.305 -0.039 -0.107 7.450 -8.691 0.098 42 B_C45:G64_B B 45 ? B 64 ? 19 1 1 B G 23 1_555 B C 32 1_555 -1.393 -0.443 0.076 5.425 -6.025 3.764 43 B_G46:C62_B B 46 ? B 62 ? 19 1 1 B C 24 1_555 B G 31 1_555 0.303 -0.155 -0.022 9.135 -10.838 1.802 44 B_C47:G61_B B 47 ? B 61 ? 19 1 1 B C 25 1_555 B G 30 1_555 0.826 -0.252 -0.216 4.814 -5.237 2.283 45 B_C48:G60_B B 48 ? B 60 ? 19 1 1 B U 26 1_555 B G 29 1_555 1.342 -5.254 -0.081 -1.776 -6.642 -102.156 46 B_U48A:G48D_B B 48 A B 48 D ? 6 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 A CCC 57 1_555 A G 2 1_555 A C 56 1_555 -0.016 -1.648 3.294 0.607 10.903 35.432 -3.965 0.102 2.687 17.412 -0.970 37.025 1 AA_G24G25:C86CCC101_AA A 24 ? A 101 ? A 25 ? A 86 ? 1 A G 2 1_555 A C 56 1_555 A G 3 1_555 A C 55 1_555 0.382 -1.997 3.300 0.825 9.275 32.066 -4.907 -0.538 2.645 16.364 -1.455 33.356 2 AA_G25G26:C85C86_AA A 25 ? A 86 ? A 26 ? A 85 ? 1 A G 3 1_555 A C 55 1_555 A A 4 1_555 A U 54 1_555 0.156 -1.822 2.917 1.621 5.708 31.383 -4.188 -0.035 2.559 10.435 -2.964 31.925 3 AA_G26A27:U84C85_AA A 26 ? A 85 ? A 27 ? A 84 ? 1 A A 4 1_555 A U 54 1_555 A U 5 1_555 A G 53 1_555 0.485 -1.181 3.146 1.414 4.461 39.019 -2.258 -0.562 3.013 6.649 -2.108 39.288 4 AA_A27U28:G83U84_AA A 27 ? A 84 ? A 28 ? A 83 ? 1 A U 5 1_555 A G 53 1_555 A C 6 1_555 A G 52 1_555 0.017 -1.962 2.859 7.292 4.509 24.913 -5.304 1.575 2.382 10.078 -16.298 26.325 5 AA_U28C29:G82G83_AA A 28 ? A 83 ? A 29 ? A 82 ? 1 A C 6 1_555 A G 52 1_555 A U 7 1_555 A G 51 1_555 0.017 -1.499 3.372 -0.452 5.624 36.972 -3.078 -0.086 3.118 8.805 0.707 37.385 6 AA_C29U30:G81G82_AA A 29 ? A 82 ? A 30 ? A 81 ? 1 A U 7 1_555 A G 51 1_555 A G 8 1_555 A C 50 1_555 -1.082 -1.752 3.072 -0.522 10.247 22.544 -6.675 2.394 2.109 24.638 1.254 24.741 7 AA_U30G31:C80G81_AA A 30 ? A 81 ? A 31 ? A 80 ? 1 A G 8 1_555 A C 50 1_555 A U 9 1_555 A G 49 1_555 0.282 -0.977 3.247 -0.728 5.162 43.977 -1.765 -0.441 3.114 6.864 0.968 44.269 8 AA_G31U32:G79C80_AA A 31 ? A 80 ? A 32 ? A 79 ? 1 A U 9 1_555 A G 49 1_555 A C 10 1_555 A G 48 1_555 0.249 -1.871 2.849 4.842 6.816 26.745 -5.172 0.413 2.319 14.299 -10.157 27.998 9 AA_U32C33:G78G79_AA A 32 ? A 79 ? A 33 ? A 78 ? 1 A C 10 1_555 A G 48 1_555 A C 12 1_555 A G 44 1_555 2.559 -0.548 3.104 4.121 -4.171 90.916 -0.305 -1.715 3.210 -2.923 -2.888 91.063 10 AA_C33C35:G74G78_AA A 33 ? A 78 ? A 35 ? A 74 ? 1 A C 12 1_555 A G 44 1_555 A C 13 1_555 A G 43 1_555 0.665 -2.541 3.219 -2.961 5.223 33.175 -5.162 -1.589 2.731 9.054 5.133 33.699 11 AA_C35C36:G73G74_AA A 35 ? A 74 ? A 36 ? A 73 ? 1 A C 13 1_555 A G 43 1_555 A C 14 1_555 A G 40 1_555 1.140 -1.584 3.461 -2.102 7.308 45.200 -2.680 -1.650 3.129 9.429 2.712 45.802 12 AA_C36C37:G70G73_AA A 36 ? A 73 ? A 37 ? A 70 ? 1 A C 14 1_555 A G 40 1_555 A C 15 1_555 A G 39 1_555 -0.460 -1.890 3.478 -3.038 8.522 31.027 -4.903 0.291 2.901 15.521 5.533 32.288 13 AA_C37C38:G69G70_AA A 37 ? A 70 ? A 38 ? A 69 ? 1 A C 15 1_555 A G 39 1_555 A A 16 1_555 A U 38 1_555 0.215 -1.321 3.216 6.226 13.845 31.677 -4.092 0.496 2.444 23.734 -10.673 35.042 14 AA_C38A39:U68G69_AA A 38 ? A 69 ? A 39 ? A 68 ? 1 A A 16 1_555 A U 38 1_555 A G 19 1_555 A C 37 1_555 -1.915 -0.993 3.287 -6.901 9.154 48.876 -1.845 1.753 3.287 10.891 8.210 50.122 15 AA_A39G42:C67U68_AA A 39 ? A 68 ? A 42 ? A 67 ? 1 A G 19 1_555 A C 37 1_555 A A 20 1_555 A U 36 1_555 -1.406 -2.168 2.853 -2.637 6.190 24.267 -6.453 2.597 2.372 14.374 6.124 25.169 16 AA_G42A43:U66C67_AA A 42 ? A 67 ? A 43 ? A 66 ? 1 A A 20 1_555 A U 36 1_555 A U 21 1_555 A A 35 1_555 0.468 -0.729 2.907 1.073 7.372 32.137 -2.373 -0.666 2.692 13.097 -1.907 32.967 17 AA_A43U44:A65U66_AA A 43 ? A 66 ? A 44 ? A 65 ? 1 A U 21 1_555 A A 35 1_555 A C 22 1_555 A G 34 1_555 0.668 -1.636 3.305 -0.498 4.832 34.503 -3.450 -1.190 3.045 8.097 0.835 34.833 18 AA_U44C45:G64A65_AA A 44 ? A 65 ? A 45 ? A 64 ? 1 A C 22 1_555 A G 34 1_555 A G 23 1_555 A C 32 1_555 1.439 -1.777 3.235 -3.545 6.051 39.818 -3.207 -2.454 2.813 8.801 5.156 40.406 19 AA_C45G46:C62G64_AA A 45 ? A 64 ? A 46 ? A 62 ? 1 A G 23 1_555 A C 32 1_555 A C 24 1_555 A G 31 1_555 0.171 -1.741 3.238 -0.534 1.316 35.833 -3.012 -0.353 3.172 2.138 0.867 35.861 20 AA_G46C47:G61C62_AA A 46 ? A 62 ? A 47 ? A 61 ? 1 A C 24 1_555 A G 31 1_555 A C 25 1_555 A G 30 1_555 0.456 -2.005 3.398 2.385 2.773 32.640 -4.031 -0.390 3.246 4.914 -4.227 32.839 21 AA_C47C48:G60G61_AA A 47 ? A 61 ? A 48 ? A 60 ? 1 A C 25 1_555 A G 30 1_555 A U 26 1_555 A G 29 1_555 -1.450 -1.093 3.392 4.428 4.628 90.928 -0.859 1.105 3.289 3.243 -3.103 91.104 22 AA_C48U48A:G48DG60_AA A 48 ? A 60 ? A 48 A A 48 D 1 B G 1 1_555 B CCC 57 1_555 B G 2 1_555 B C 56 1_555 0.182 -1.808 3.269 -0.156 12.253 34.196 -4.465 -0.312 2.496 20.056 0.256 36.264 23 BB_G24G25:C86CCC101_BB B 24 ? B 101 ? B 25 ? B 86 ? 1 B G 2 1_555 B C 56 1_555 B G 3 1_555 B C 55 1_555 0.334 -1.862 3.411 0.491 8.339 33.498 -4.404 -0.489 2.883 14.195 -0.836 34.495 24 BB_G25G26:C85C86_BB B 25 ? B 86 ? B 26 ? B 85 ? 1 B G 3 1_555 B C 55 1_555 B A 4 1_555 B U 54 1_555 -0.031 -1.640 2.983 0.186 4.833 26.489 -4.597 0.108 2.646 10.436 -0.402 26.919 25 BB_G26A27:U84C85_BB B 26 ? B 85 ? B 27 ? B 84 ? 1 B A 4 1_555 B U 54 1_555 B U 5 1_555 B G 53 1_555 0.873 -1.060 3.122 3.881 3.987 39.354 -2.001 -0.855 3.073 5.885 -5.728 39.730 26 BB_A27U28:G83U84_BB B 27 ? B 84 ? B 28 ? B 83 ? 1 B U 5 1_555 B G 53 1_555 B C 6 1_555 B G 52 1_555 -0.015 -1.985 3.042 5.468 4.993 23.480 -5.990 1.494 2.505 11.895 -13.028 24.604 27 BB_U28C29:G82G83_BB B 28 ? B 83 ? B 29 ? B 82 ? 1 B C 6 1_555 B G 52 1_555 B U 7 1_555 B G 51 1_555 0.025 -1.508 3.399 -0.684 5.809 36.761 -3.140 -0.131 3.132 9.140 1.076 37.208 28 BB_C29U30:G81G82_BB B 29 ? B 82 ? B 30 ? B 81 ? 1 B U 7 1_555 B G 51 1_555 B G 8 1_555 B C 50 1_555 -1.100 -1.759 3.083 -0.426 10.207 22.376 -6.751 2.476 2.109 24.713 1.032 24.571 29 BB_U30G31:C80G81_BB B 30 ? B 81 ? B 31 ? B 80 ? 1 B G 8 1_555 B C 50 1_555 B U 9 1_555 B G 49 1_555 0.259 -0.965 3.252 -0.760 5.019 43.868 -1.744 -0.414 3.124 6.691 1.013 44.146 30 BB_G31U32:G79C80_BB B 31 ? B 80 ? B 32 ? B 79 ? 1 B U 9 1_555 B G 49 1_555 B C 10 1_555 B G 48 1_555 0.256 -1.855 2.858 4.711 6.313 26.876 -5.058 0.384 2.379 13.226 -9.870 27.986 31 BB_U32C33:G78G79_BB B 32 ? B 79 ? B 33 ? B 78 ? 1 B C 10 1_555 B G 48 1_555 B C 12 1_555 B G 44 1_555 2.616 -0.646 3.146 3.470 -3.431 89.805 -0.389 -1.783 3.242 -2.428 -2.457 89.909 32 BB_C33C35:G74G78_BB B 33 ? B 78 ? B 35 ? B 74 ? 1 B C 12 1_555 B G 44 1_555 B C 13 1_555 B G 43 1_555 0.496 -2.101 3.268 -2.656 2.056 34.828 -3.798 -1.215 3.098 3.425 4.425 34.984 33 BB_C35C36:G73G74_BB B 35 ? B 74 ? B 36 ? B 73 ? 1 B C 13 1_555 B G 43 1_555 B C 14 1_555 B G 40 1_555 1.257 -1.903 3.348 -2.053 9.840 43.878 -3.338 -1.821 2.821 12.967 2.705 44.959 34 BB_C36C37:G70G73_BB B 36 ? B 73 ? B 37 ? B 70 ? 1 B C 14 1_555 B G 40 1_555 B C 15 1_555 B G 39 1_555 -0.446 -1.887 3.483 -3.520 8.661 31.679 -4.791 0.189 2.912 15.449 6.279 32.996 35 BB_C37C38:G69G70_BB B 37 ? B 70 ? B 38 ? B 69 ? 1 B C 15 1_555 B G 39 1_555 B A 16 1_555 B U 38 1_555 0.150 -1.355 3.292 3.711 11.945 32.203 -4.028 0.289 2.639 20.590 -6.397 34.487 36 BB_C38A39:U68G69_BB B 38 ? B 69 ? B 39 ? B 68 ? 1 B A 16 1_555 B U 38 1_555 B G 19 1_555 B C 37 1_555 -1.883 -1.205 3.294 -4.211 7.750 48.658 -2.020 1.938 3.221 9.317 5.062 49.403 37 BB_A39G42:C67U68_BB B 39 ? B 68 ? B 42 ? B 67 ? 1 B G 19 1_555 B C 37 1_555 B A 20 1_555 B U 36 1_555 -1.308 -2.174 2.837 -2.369 6.095 24.601 -6.348 2.421 2.352 13.990 5.438 25.443 38 BB_G42A43:U66C67_BB B 42 ? B 67 ? B 43 ? B 66 ? 1 B A 20 1_555 B U 36 1_555 B U 21 1_555 B A 35 1_555 0.445 -0.711 2.921 1.062 7.225 32.408 -2.302 -0.623 2.717 12.743 -1.873 33.199 39 BB_A43U44:A65U66_BB B 43 ? B 66 ? B 44 ? B 65 ? 1 B U 21 1_555 B A 35 1_555 B C 22 1_555 B G 34 1_555 0.747 -1.578 3.276 -0.102 3.593 36.306 -3.007 -1.208 3.109 5.748 0.164 36.478 40 BB_U44C45:G64A65_BB B 44 ? B 65 ? B 45 ? B 64 ? 1 B C 22 1_555 B G 34 1_555 B G 23 1_555 B C 32 1_555 1.675 -1.624 3.209 -2.286 7.620 34.489 -3.700 -3.065 2.688 12.645 3.794 35.368 41 BB_C45G46:C62G64_BB B 45 ? B 64 ? B 46 ? B 62 ? 1 B G 23 1_555 B C 32 1_555 B C 24 1_555 B G 31 1_555 -0.101 -1.605 3.226 -1.562 1.985 38.986 -2.634 -0.032 3.145 2.970 2.338 39.064 42 BB_G46C47:G61C62_BB B 46 ? B 62 ? B 47 ? B 61 ? 1 B C 24 1_555 B G 31 1_555 B C 25 1_555 B G 30 1_555 0.456 -2.009 3.403 2.272 2.765 32.418 -4.069 -0.409 3.249 4.933 -4.054 32.609 43 BB_C47C48:G60G61_BB B 47 ? B 61 ? B 48 ? B 60 ? 1 B C 25 1_555 B G 30 1_555 B U 26 1_555 B G 29 1_555 -1.454 -1.099 3.390 4.394 4.518 90.557 -0.864 1.111 3.287 3.176 -3.089 90.728 44 BB_C48U48A:G48DG60_BB B 48 ? B 60 ? B 48 A B 48 D # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'French National Research Agency' France ANR-06-BLAN-0072 1 'French National Research Agency' France ANR-12-BSV5-0018 2 'French National Research Agency' France ANR-10-INSB-05-01 3 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 5LYS _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 5LYV _atom_sites.fract_transf_matrix[1][1] 0.021222 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005766 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020947 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015031 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MG N O OS P # loop_