data_5M1Y # _entry.id 5M1Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 5M1Y pdb_00005m1y 10.2210/pdb5m1y/pdb WWPDB D_1200001732 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2016-10-26 2 'Structure model' 1 1 2017-09-13 3 'Structure model' 1 2 2019-07-17 4 'Structure model' 1 3 2024-01-17 5 'Structure model' 1 4 2024-10-09 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Refinement description' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 3 'Structure model' pdbx_struct_assembly 3 3 'Structure model' pdbx_struct_assembly_gen 4 3 'Structure model' pdbx_struct_assembly_prop 5 3 'Structure model' pdbx_struct_conn_angle 6 3 'Structure model' struct_conn 7 4 'Structure model' chem_comp_atom 8 4 'Structure model' chem_comp_bond 9 4 'Structure model' database_2 10 4 'Structure model' pdbx_initial_refinement_model 11 4 'Structure model' pdbx_struct_conn_angle 12 4 'Structure model' struct_conn 13 5 'Structure model' pdbx_entry_details 14 5 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.value' 21 4 'Structure model' '_struct_conn.pdbx_dist_value' 22 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 23 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 24 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 25 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 30 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 31 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 32 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 33 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 34 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 35 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2016-10-26 _pdbx_database_PDB_obs_spr.pdb_id 5M1Y _pdbx_database_PDB_obs_spr.replace_pdb_id 4ow9 _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 5M1Y _pdbx_database_status.recvd_initial_deposition_date 2016-10-11 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Helliwell, J.R.' _audit_author.pdbx_ordinal 1 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? ? ? ? primary Zenodo ? ? ? ? ? ? ? ? ? 'The case of 1lkr held at the PDB and its variable amino acid occupancies; re refinement of 4ow9 to correct this' 2016 ? 10.5281/zenodo.160328 ? ? ? ? ? ? ? ? ? US ? ? 1 'Acta Crystallogr F Struct Biol Commun' ACSFEN ? 2053-230X ? ? 70 ? 1127 1131 'Chemical conversion of cisplatin and carboplatin with histidine in a model protein crystallized under sodium iodide conditions.' 2014 ? 10.1107/S2053230X14013995 25195879 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Helliwell, J.R.' 1 ? primary 'Tanley, S.W.M.' 2 ? 1 'Tanley, S.W.' 3 ? 1 'Helliwell, J.R.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Lysozyme C' 14331.160 2 3.2.1.17 ? ? ? 2 non-polymer syn 'PLATINUM (II) ION' 195.078 3 ? ? ? ? 3 non-polymer syn 'IODIDE ION' 126.904 26 ? ? ? ? 4 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 6 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 7 water nat water 18.015 36 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '1,4-beta-N-acetylmuramidase C,Allergen Gal d IV' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_seq_one_letter_code_can ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PLATINUM (II) ION' PT 3 'IODIDE ION' IOD 4 'DIMETHYL SULFOXIDE' DMS 5 'CHLORIDE ION' CL 6 'SODIUM ION' NA 7 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 VAL n 1 3 PHE n 1 4 GLY n 1 5 ARG n 1 6 CYS n 1 7 GLU n 1 8 LEU n 1 9 ALA n 1 10 ALA n 1 11 ALA n 1 12 MET n 1 13 LYS n 1 14 ARG n 1 15 HIS n 1 16 GLY n 1 17 LEU n 1 18 ASP n 1 19 ASN n 1 20 TYR n 1 21 ARG n 1 22 GLY n 1 23 TYR n 1 24 SER n 1 25 LEU n 1 26 GLY n 1 27 ASN n 1 28 TRP n 1 29 VAL n 1 30 CYS n 1 31 ALA n 1 32 ALA n 1 33 LYS n 1 34 PHE n 1 35 GLU n 1 36 SER n 1 37 ASN n 1 38 PHE n 1 39 ASN n 1 40 THR n 1 41 GLN n 1 42 ALA n 1 43 THR n 1 44 ASN n 1 45 ARG n 1 46 ASN n 1 47 THR n 1 48 ASP n 1 49 GLY n 1 50 SER n 1 51 THR n 1 52 ASP n 1 53 TYR n 1 54 GLY n 1 55 ILE n 1 56 LEU n 1 57 GLN n 1 58 ILE n 1 59 ASN n 1 60 SER n 1 61 ARG n 1 62 TRP n 1 63 TRP n 1 64 CYS n 1 65 ASN n 1 66 ASP n 1 67 GLY n 1 68 ARG n 1 69 THR n 1 70 PRO n 1 71 GLY n 1 72 SER n 1 73 ARG n 1 74 ASN n 1 75 LEU n 1 76 CYS n 1 77 ASN n 1 78 ILE n 1 79 PRO n 1 80 CYS n 1 81 SER n 1 82 ALA n 1 83 LEU n 1 84 LEU n 1 85 SER n 1 86 SER n 1 87 ASP n 1 88 ILE n 1 89 THR n 1 90 ALA n 1 91 SER n 1 92 VAL n 1 93 ASN n 1 94 CYS n 1 95 ALA n 1 96 LYS n 1 97 LYS n 1 98 ILE n 1 99 VAL n 1 100 SER n 1 101 ASP n 1 102 GLY n 1 103 ASN n 1 104 GLY n 1 105 MET n 1 106 ASN n 1 107 ALA n 1 108 TRP n 1 109 VAL n 1 110 ALA n 1 111 TRP n 1 112 ARG n 1 113 ASN n 1 114 ARG n 1 115 CYS n 1 116 LYS n 1 117 GLY n 1 118 THR n 1 119 ASP n 1 120 VAL n 1 121 GLN n 1 122 ALA n 1 123 TRP n 1 124 ILE n 1 125 ARG n 1 126 GLY n 1 127 CYS n 1 128 ARG n 1 129 LEU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num 1 _entity_src_nat.pdbx_end_seq_num 129 _entity_src_nat.common_name Chicken _entity_src_nat.pdbx_organism_scientific 'Gallus gallus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9031 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PT non-polymer . 'PLATINUM (II) ION' ? 'Pt 2' 195.078 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 1 1 LYS LYS A . n A 1 2 VAL 2 2 2 VAL VAL A . n A 1 3 PHE 3 3 3 PHE PHE A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 ARG 5 5 5 ARG ARG A . n A 1 6 CYS 6 6 6 CYS CYS A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 MET 12 12 12 MET MET A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 ARG 14 14 14 ARG ARG A . n A 1 15 HIS 15 15 15 HIS HIS A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ASP 18 18 18 ASP ASP A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 SER 24 24 24 SER SER A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 ASN 27 27 27 ASN ASN A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 ALA 31 31 31 ALA ALA A . n A 1 32 ALA 32 32 32 ALA ALA A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 PHE 34 34 34 PHE PHE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 ASN 39 39 39 ASN ASN A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ASN 44 44 44 ASN ASN A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 GLY 54 54 54 GLY GLY A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 ILE 58 58 58 ILE ILE A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 TRP 62 62 62 TRP TRP A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 CYS 64 64 64 CYS CYS A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ARG 68 68 68 ARG ARG A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 GLY 71 71 71 GLY GLY A . n A 1 72 SER 72 72 72 SER SER A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 LEU 75 75 75 LEU LEU A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 CYS 80 80 80 CYS CYS A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 ALA 82 82 82 ALA ALA A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 ILE 88 88 88 ILE ILE A . n A 1 89 THR 89 89 89 THR THR A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 VAL 92 92 92 VAL VAL A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 CYS 94 94 94 CYS CYS A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 SER 100 100 100 SER SER A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 GLY 102 102 102 GLY GLY A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 GLY 104 104 104 GLY GLY A . n A 1 105 MET 105 105 105 MET MET A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 TRP 108 108 108 TRP TRP A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 ALA 110 110 110 ALA ALA A . n A 1 111 TRP 111 111 111 TRP TRP A . n A 1 112 ARG 112 112 112 ARG ARG A . n A 1 113 ASN 113 113 113 ASN ASN A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 CYS 115 115 115 CYS CYS A . n A 1 116 LYS 116 116 116 LYS LYS A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 THR 118 118 118 THR THR A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 VAL 120 120 120 VAL VAL A . n A 1 121 GLN 121 121 121 GLN GLN A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 TRP 123 123 123 TRP TRP A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 ARG 125 125 125 ARG ARG A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 CYS 127 127 127 CYS CYS A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 LEU 129 129 129 LEU LEU A . n B 1 1 LYS 1 1 1 LYS LYS B . n B 1 2 VAL 2 2 2 VAL VAL B . n B 1 3 PHE 3 3 3 PHE PHE B . n B 1 4 GLY 4 4 4 GLY GLY B . n B 1 5 ARG 5 5 5 ARG ARG B . n B 1 6 CYS 6 6 6 CYS CYS B . n B 1 7 GLU 7 7 7 GLU GLU B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 ALA 9 9 9 ALA ALA B . n B 1 10 ALA 10 10 10 ALA ALA B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 MET 12 12 12 MET MET B . n B 1 13 LYS 13 13 13 LYS LYS B . n B 1 14 ARG 14 14 14 ARG ARG B . n B 1 15 HIS 15 15 15 HIS HIS B . n B 1 16 GLY 16 16 16 GLY GLY B . n B 1 17 LEU 17 17 17 LEU LEU B . n B 1 18 ASP 18 18 18 ASP ASP B . n B 1 19 ASN 19 19 19 ASN ASN B . n B 1 20 TYR 20 20 20 TYR TYR B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 GLY 22 22 22 GLY GLY B . n B 1 23 TYR 23 23 23 TYR TYR B . n B 1 24 SER 24 24 24 SER SER B . n B 1 25 LEU 25 25 25 LEU LEU B . n B 1 26 GLY 26 26 26 GLY GLY B . n B 1 27 ASN 27 27 27 ASN ASN B . n B 1 28 TRP 28 28 28 TRP TRP B . n B 1 29 VAL 29 29 29 VAL VAL B . n B 1 30 CYS 30 30 30 CYS CYS B . n B 1 31 ALA 31 31 31 ALA ALA B . n B 1 32 ALA 32 32 32 ALA ALA B . n B 1 33 LYS 33 33 33 LYS LYS B . n B 1 34 PHE 34 34 34 PHE PHE B . n B 1 35 GLU 35 35 35 GLU GLU B . n B 1 36 SER 36 36 36 SER SER B . n B 1 37 ASN 37 37 37 ASN ASN B . n B 1 38 PHE 38 38 38 PHE PHE B . n B 1 39 ASN 39 39 39 ASN ASN B . n B 1 40 THR 40 40 40 THR THR B . n B 1 41 GLN 41 41 41 GLN GLN B . n B 1 42 ALA 42 42 42 ALA ALA B . n B 1 43 THR 43 43 43 THR THR B . n B 1 44 ASN 44 44 44 ASN ASN B . n B 1 45 ARG 45 45 45 ARG ARG B . n B 1 46 ASN 46 46 46 ASN ASN B . n B 1 47 THR 47 47 47 THR THR B . n B 1 48 ASP 48 48 48 ASP ASP B . n B 1 49 GLY 49 49 49 GLY GLY B . n B 1 50 SER 50 50 50 SER SER B . n B 1 51 THR 51 51 51 THR THR B . n B 1 52 ASP 52 52 52 ASP ASP B . n B 1 53 TYR 53 53 53 TYR TYR B . n B 1 54 GLY 54 54 54 GLY GLY B . n B 1 55 ILE 55 55 55 ILE ILE B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 GLN 57 57 57 GLN GLN B . n B 1 58 ILE 58 58 58 ILE ILE B . n B 1 59 ASN 59 59 59 ASN ASN B . n B 1 60 SER 60 60 60 SER SER B . n B 1 61 ARG 61 61 61 ARG ARG B . n B 1 62 TRP 62 62 62 TRP TRP B . n B 1 63 TRP 63 63 63 TRP TRP B . n B 1 64 CYS 64 64 64 CYS CYS B . n B 1 65 ASN 65 65 65 ASN ASN B . n B 1 66 ASP 66 66 66 ASP ASP B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 ARG 68 68 68 ARG ARG B . n B 1 69 THR 69 69 69 THR THR B . n B 1 70 PRO 70 70 70 PRO PRO B . n B 1 71 GLY 71 71 71 GLY GLY B . n B 1 72 SER 72 72 72 SER SER B . n B 1 73 ARG 73 73 73 ARG ARG B . n B 1 74 ASN 74 74 74 ASN ASN B . n B 1 75 LEU 75 75 75 LEU LEU B . n B 1 76 CYS 76 76 76 CYS CYS B . n B 1 77 ASN 77 77 77 ASN ASN B . n B 1 78 ILE 78 78 78 ILE ILE B . n B 1 79 PRO 79 79 79 PRO PRO B . n B 1 80 CYS 80 80 80 CYS CYS B . n B 1 81 SER 81 81 81 SER SER B . n B 1 82 ALA 82 82 82 ALA ALA B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 LEU 84 84 84 LEU LEU B . n B 1 85 SER 85 85 85 SER SER B . n B 1 86 SER 86 86 86 SER SER B . n B 1 87 ASP 87 87 87 ASP ASP B . n B 1 88 ILE 88 88 88 ILE ILE B . n B 1 89 THR 89 89 89 THR THR B . n B 1 90 ALA 90 90 90 ALA ALA B . n B 1 91 SER 91 91 91 SER SER B . n B 1 92 VAL 92 92 92 VAL VAL B . n B 1 93 ASN 93 93 93 ASN ASN B . n B 1 94 CYS 94 94 94 CYS CYS B . n B 1 95 ALA 95 95 95 ALA ALA B . n B 1 96 LYS 96 96 96 LYS LYS B . n B 1 97 LYS 97 97 97 LYS LYS B . n B 1 98 ILE 98 98 98 ILE ILE B . n B 1 99 VAL 99 99 99 VAL VAL B . n B 1 100 SER 100 100 100 SER SER B . n B 1 101 ASP 101 101 101 ASP ASP B . n B 1 102 GLY 102 102 102 GLY GLY B . n B 1 103 ASN 103 103 103 ASN ASN B . n B 1 104 GLY 104 104 104 GLY GLY B . n B 1 105 MET 105 105 105 MET MET B . n B 1 106 ASN 106 106 106 ASN ASN B . n B 1 107 ALA 107 107 107 ALA ALA B . n B 1 108 TRP 108 108 108 TRP TRP B . n B 1 109 VAL 109 109 109 VAL VAL B . n B 1 110 ALA 110 110 110 ALA ALA B . n B 1 111 TRP 111 111 111 TRP TRP B . n B 1 112 ARG 112 112 112 ARG ARG B . n B 1 113 ASN 113 113 113 ASN ASN B . n B 1 114 ARG 114 114 114 ARG ARG B . n B 1 115 CYS 115 115 115 CYS CYS B . n B 1 116 LYS 116 116 116 LYS LYS B . n B 1 117 GLY 117 117 117 GLY GLY B . n B 1 118 THR 118 118 118 THR THR B . n B 1 119 ASP 119 119 119 ASP ASP B . n B 1 120 VAL 120 120 120 VAL VAL B . n B 1 121 GLN 121 121 121 GLN GLN B . n B 1 122 ALA 122 122 122 ALA ALA B . n B 1 123 TRP 123 123 123 TRP TRP B . n B 1 124 ILE 124 124 124 ILE ILE B . n B 1 125 ARG 125 125 125 ARG ARG B . n B 1 126 GLY 126 126 126 GLY GLY B . n B 1 127 CYS 127 127 127 CYS CYS B . n B 1 128 ARG 128 128 128 ARG ARG B . n B 1 129 LEU 129 129 129 LEU LEU B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PT 1 201 201 PT PT A . D 2 PT 1 202 202 PT PT A . E 3 IOD 1 203 203 IOD IOD A . F 3 IOD 1 204 204 IOD IOD A . G 3 IOD 1 205 205 IOD IOD A . H 3 IOD 1 206 206 IOD IOD A . I 3 IOD 1 207 207 IOD IOD A . J 3 IOD 1 208 208 IOD IOD A . K 3 IOD 1 209 209 IOD IOD A . L 3 IOD 1 210 210 IOD IOD A . M 3 IOD 1 211 211 IOD IOD A . N 3 IOD 1 212 212 IOD IOD A . O 3 IOD 1 213 213 IOD IOD A . P 4 DMS 1 214 219 DMS DMS A . Q 4 DMS 1 215 220 DMS DMS A . R 4 DMS 1 216 221 DMS DMS A . S 5 CL 1 217 222 CL CL A . T 5 CL 1 218 223 CL CL A . U 3 IOD 1 219 1 IOD I A . V 3 IOD 1 220 2 IOD I A . W 3 IOD 1 221 3 IOD I A . X 3 IOD 1 222 8 IOD I A . Y 3 IOD 1 223 9 IOD I A . Z 2 PT 1 201 201 PT PT B . AA 3 IOD 1 202 202 IOD IOD B . BA 3 IOD 1 203 203 IOD IOD B . CA 3 IOD 1 204 204 IOD IOD B . DA 3 IOD 1 205 205 IOD IOD B . EA 3 IOD 1 206 206 IOD IOD B . FA 3 IOD 1 207 208 IOD IOD B . GA 3 IOD 1 208 211 IOD IOD B . HA 4 DMS 1 209 212 DMS DMS B . IA 4 DMS 1 210 214 DMS DMS B . JA 4 DMS 1 211 215 DMS DMS B . KA 5 CL 1 212 217 CL CL B . LA 6 NA 1 213 218 NA NA B . MA 3 IOD 1 214 4 IOD I B . NA 3 IOD 1 215 6 IOD I B . OA 3 IOD 1 216 10 IOD I B . PA 7 HOH 1 301 304 HOH HOH A . PA 7 HOH 2 302 303 HOH HOH A . PA 7 HOH 3 303 317 HOH HOH A . PA 7 HOH 4 304 314 HOH HOH A . PA 7 HOH 5 305 305 HOH HOH A . PA 7 HOH 6 306 320 HOH HOH A . PA 7 HOH 7 307 306 HOH HOH A . PA 7 HOH 8 308 318 HOH HOH A . PA 7 HOH 9 309 307 HOH HOH A . PA 7 HOH 10 310 313 HOH HOH A . PA 7 HOH 11 311 309 HOH HOH A . PA 7 HOH 12 312 316 HOH HOH A . PA 7 HOH 13 313 308 HOH HOH A . PA 7 HOH 14 314 315 HOH HOH A . PA 7 HOH 15 315 310 HOH HOH A . PA 7 HOH 16 316 319 HOH HOH A . QA 7 HOH 1 301 318 HOH HOH B . QA 7 HOH 2 302 317 HOH HOH B . QA 7 HOH 3 303 301 HOH HOH B . QA 7 HOH 4 304 304 HOH HOH B . QA 7 HOH 5 305 319 HOH HOH B . QA 7 HOH 6 306 315 HOH HOH B . QA 7 HOH 7 307 314 HOH HOH B . QA 7 HOH 8 308 302 HOH HOH B . QA 7 HOH 9 309 1 HOH HOH B . QA 7 HOH 10 310 303 HOH HOH B . QA 7 HOH 11 311 305 HOH HOH B . QA 7 HOH 12 312 312 HOH HOH B . QA 7 HOH 13 313 306 HOH HOH B . QA 7 HOH 14 314 316 HOH HOH B . QA 7 HOH 15 315 307 HOH HOH B . QA 7 HOH 16 316 309 HOH HOH B . QA 7 HOH 17 317 311 HOH HOH B . QA 7 HOH 18 318 308 HOH HOH B . QA 7 HOH 19 319 312 HOH HOH B . QA 7 HOH 20 320 2 HOH HOH B . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 2 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? 'PROTEUM PLUS' ? ? ? . 3 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? 'PROTEUM PLUS' ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.92 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 5M1Y _cell.details ? _cell.formula_units_Z ? _cell.length_a 27.251 _cell.length_a_esd ? _cell.length_b 62.537 _cell.length_b_esd ? _cell.length_c 58.981 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5M1Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 5M1Y _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 1.8 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 30 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'BATCH MODE' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 4.7 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details ;CRYSTALLIZATION CONDITIONS: 20MG HEWL CO-CRYSTALLISED WITH 1.2MG CISPLATIN WITH 75UL DMSO, 462.5UL 0.1M NAAC AND 462.5UL 1M NAI SOLUTION ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'APEX II CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-12-16 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'SEALED TUBE' _diffrn_source.target ? _diffrn_source.type 'BRUKER IMUS MICROFOCUS' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 5M1Y _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.9 _reflns.d_resolution_low 31 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11097 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 71 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.9 _reflns.pdbx_Rmerge_I_obs 0.13 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 21 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.229 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 1.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 5M1Y _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.904 _refine.ls_d_res_low 31 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11078 _refine.ls_number_reflns_R_free 547 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 71.04 _refine.ls_percent_reflns_R_free 4.94 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2182 _refine.ls_R_factor_R_free 0.2621 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2159 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 4ow9 _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.02 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.29 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2002 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 57 _refine_hist.number_atoms_solvent 36 _refine_hist.number_atoms_total 2095 _refine_hist.d_res_high 1.904 _refine_hist.d_res_low 31 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.003 ? 2068 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.719 ? 2780 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 12.025 ? 730 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.027 ? 288 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.002 ? 362 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.9039 2.0954 . . 53 900 24.00 . . . 0.2184 . 0.2535 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.0954 2.3985 . . 104 2403 65.00 . . . 0.3055 . 0.2482 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3985 3.0215 . . 204 3484 94.00 . . . 0.3202 . 0.2356 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0215 31.2727 . . 186 3744 100.00 . . . 0.2214 . 0.1906 . . . . . . . . . . # _struct.entry_id 5M1Y _struct.title 'The case of 1lkr held at the PDB and its variable amino acid occupancies; re refinement of 4ow9 to correct this' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 5M1Y _struct_keywords.text '1lkr; 4ow9; re-refinement;amino acids, hydrolase' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 5 ? T N N 5 ? U N N 3 ? V N N 3 ? W N N 3 ? X N N 3 ? Y N N 3 ? Z N N 2 ? AA N N 3 ? BA N N 3 ? CA N N 3 ? DA N N 3 ? EA N N 3 ? FA N N 3 ? GA N N 3 ? HA N N 4 ? IA N N 4 ? JA N N 4 ? KA N N 5 ? LA N N 6 ? MA N N 3 ? NA N N 3 ? OA N N 3 ? PA N N 7 ? QA N N 7 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LYSC_CHICK _struct_ref.pdbx_db_accession P00698 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _struct_ref.pdbx_align_begin 19 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 5M1Y A 1 ? 129 ? P00698 19 ? 147 ? 1 129 2 1 5M1Y B 1 ? 129 ? P00698 19 ? 147 ? 1 129 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA monomeric 1 2 author_and_software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,PA 2 1 B,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,QA # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 4 ? HIS A 15 ? GLY A 4 HIS A 15 1 ? 12 HELX_P HELX_P2 AA2 ASN A 19 ? TYR A 23 ? ASN A 19 TYR A 23 5 ? 5 HELX_P HELX_P3 AA3 SER A 24 ? ASN A 37 ? SER A 24 ASN A 37 1 ? 14 HELX_P HELX_P4 AA4 PRO A 79 ? LEU A 84 ? PRO A 79 LEU A 84 5 ? 6 HELX_P HELX_P5 AA5 ILE A 88 ? SER A 100 ? ILE A 88 SER A 100 1 ? 13 HELX_P HELX_P6 AA6 ASN A 103 ? ALA A 107 ? ASN A 103 ALA A 107 5 ? 5 HELX_P HELX_P7 AA7 TRP A 108 ? CYS A 115 ? TRP A 108 CYS A 115 1 ? 8 HELX_P HELX_P8 AA8 ASP A 119 ? ARG A 125 ? ASP A 119 ARG A 125 5 ? 7 HELX_P HELX_P9 AA9 GLY B 4 ? HIS B 15 ? GLY B 4 HIS B 15 1 ? 12 HELX_P HELX_P10 AB1 ASN B 19 ? TYR B 23 ? ASN B 19 TYR B 23 5 ? 5 HELX_P HELX_P11 AB2 SER B 24 ? ASN B 37 ? SER B 24 ASN B 37 1 ? 14 HELX_P HELX_P12 AB3 PRO B 79 ? SER B 85 ? PRO B 79 SER B 85 5 ? 7 HELX_P HELX_P13 AB4 ILE B 88 ? VAL B 99 ? ILE B 88 VAL B 99 1 ? 12 HELX_P HELX_P14 AB5 ASN B 103 ? ALA B 107 ? ASN B 103 ALA B 107 5 ? 5 HELX_P HELX_P15 AB6 TRP B 108 ? CYS B 115 ? TRP B 108 CYS B 115 1 ? 8 HELX_P HELX_P16 AB7 ASP B 119 ? ARG B 125 ? ASP B 119 ARG B 125 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 6 SG ? ? ? 1_555 A CYS 127 SG ? ? A CYS 6 A CYS 127 1_555 ? ? ? ? ? ? ? 2.030 ? ? disulf2 disulf ? ? A CYS 30 SG ? ? ? 1_555 A CYS 115 SG ? ? A CYS 30 A CYS 115 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 64 SG ? ? ? 1_555 A CYS 80 SG ? ? A CYS 64 A CYS 80 1_555 ? ? ? ? ? ? ? 2.033 ? ? disulf4 disulf ? ? A CYS 76 SG ? ? ? 1_555 A CYS 94 SG ? ? A CYS 76 A CYS 94 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf5 disulf ? ? B CYS 6 SG ? ? ? 1_555 B CYS 127 SG ? ? B CYS 6 B CYS 127 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf6 disulf ? ? B CYS 30 SG ? ? ? 1_555 B CYS 115 SG ? ? B CYS 30 B CYS 115 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf7 disulf ? ? B CYS 64 SG ? ? ? 1_555 B CYS 80 SG ? ? B CYS 64 B CYS 80 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf8 disulf ? ? B CYS 76 SG ? ? ? 1_555 B CYS 94 SG ? ? B CYS 76 B CYS 94 1_555 ? ? ? ? ? ? ? 2.035 ? ? metalc1 metalc ? ? A HIS 15 ND1 ? ? ? 1_555 C PT . PT ? ? A HIS 15 A PT 201 1_555 ? ? ? ? ? ? ? 2.077 ? ? metalc2 metalc both ? C PT . PT ? ? ? 1_555 E IOD . I ? ? A PT 201 A IOD 203 1_555 ? ? ? ? ? ? ? 2.577 ? ? metalc3 metalc both ? C PT . PT ? ? ? 1_555 F IOD . I ? ? A PT 201 A IOD 204 1_555 ? ? ? ? ? ? ? 2.538 ? ? metalc4 metalc both ? C PT . PT ? ? ? 1_555 S CL . CL ? ? A PT 201 A CL 217 1_555 ? ? ? ? ? ? ? 2.347 ? ? metalc5 metalc both ? D PT . PT ? ? ? 1_555 G IOD . I ? ? A PT 202 A IOD 205 1_555 ? ? ? ? ? ? ? 2.739 ? ? metalc6 metalc both ? D PT . PT ? ? ? 1_555 H IOD . I ? ? A PT 202 A IOD 206 1_555 ? ? ? ? ? ? ? 2.542 ? ? metalc7 metalc both ? D PT . PT ? ? ? 1_555 I IOD . I ? ? A PT 202 A IOD 207 1_555 ? ? ? ? ? ? ? 2.572 ? ? metalc8 metalc both ? D PT . PT ? ? ? 1_555 T CL . CL ? ? A PT 202 A CL 218 1_555 ? ? ? ? ? ? ? 2.233 ? ? metalc9 metalc ? ? B HIS 15 ND1 ? ? ? 1_555 Z PT . PT ? ? B HIS 15 B PT 201 1_555 ? ? ? ? ? ? ? 2.348 ? ? metalc10 metalc both ? Z PT . PT ? ? ? 1_555 AA IOD . I ? ? B PT 201 B IOD 202 1_555 ? ? ? ? ? ? ? 2.584 ? ? metalc11 metalc both ? Z PT . PT ? ? ? 1_555 BA IOD . I ? ? B PT 201 B IOD 203 1_555 ? ? ? ? ? ? ? 2.719 ? ? metalc12 metalc both ? Z PT . PT ? ? ? 1_555 KA CL . CL ? ? B PT 201 B CL 212 1_555 ? ? ? ? ? ? ? 2.584 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 15 ? A HIS 15 ? 1_555 PT ? C PT . ? A PT 201 ? 1_555 I ? E IOD . ? A IOD 203 ? 1_555 86.9 ? 2 ND1 ? A HIS 15 ? A HIS 15 ? 1_555 PT ? C PT . ? A PT 201 ? 1_555 I ? F IOD . ? A IOD 204 ? 1_555 87.6 ? 3 I ? E IOD . ? A IOD 203 ? 1_555 PT ? C PT . ? A PT 201 ? 1_555 I ? F IOD . ? A IOD 204 ? 1_555 174.2 ? 4 ND1 ? A HIS 15 ? A HIS 15 ? 1_555 PT ? C PT . ? A PT 201 ? 1_555 CL ? S CL . ? A CL 217 ? 1_555 176.4 ? 5 I ? E IOD . ? A IOD 203 ? 1_555 PT ? C PT . ? A PT 201 ? 1_555 CL ? S CL . ? A CL 217 ? 1_555 92.0 ? 6 I ? F IOD . ? A IOD 204 ? 1_555 PT ? C PT . ? A PT 201 ? 1_555 CL ? S CL . ? A CL 217 ? 1_555 93.7 ? 7 I ? G IOD . ? A IOD 205 ? 1_555 PT ? D PT . ? A PT 202 ? 1_555 I ? H IOD . ? A IOD 206 ? 1_555 90.6 ? 8 I ? G IOD . ? A IOD 205 ? 1_555 PT ? D PT . ? A PT 202 ? 1_555 I ? I IOD . ? A IOD 207 ? 1_555 177.0 ? 9 I ? H IOD . ? A IOD 206 ? 1_555 PT ? D PT . ? A PT 202 ? 1_555 I ? I IOD . ? A IOD 207 ? 1_555 86.7 ? 10 I ? G IOD . ? A IOD 205 ? 1_555 PT ? D PT . ? A PT 202 ? 1_555 CL ? T CL . ? A CL 218 ? 1_555 82.7 ? 11 I ? H IOD . ? A IOD 206 ? 1_555 PT ? D PT . ? A PT 202 ? 1_555 CL ? T CL . ? A CL 218 ? 1_555 173.2 ? 12 I ? I IOD . ? A IOD 207 ? 1_555 PT ? D PT . ? A PT 202 ? 1_555 CL ? T CL . ? A CL 218 ? 1_555 100.0 ? 13 ND1 ? B HIS 15 ? B HIS 15 ? 1_555 PT ? Z PT . ? B PT 201 ? 1_555 I ? AA IOD . ? B IOD 202 ? 1_555 83.6 ? 14 ND1 ? B HIS 15 ? B HIS 15 ? 1_555 PT ? Z PT . ? B PT 201 ? 1_555 I ? BA IOD . ? B IOD 203 ? 1_555 88.6 ? 15 I ? AA IOD . ? B IOD 202 ? 1_555 PT ? Z PT . ? B PT 201 ? 1_555 I ? BA IOD . ? B IOD 203 ? 1_555 170.3 ? 16 ND1 ? B HIS 15 ? B HIS 15 ? 1_555 PT ? Z PT . ? B PT 201 ? 1_555 CL ? KA CL . ? B CL 212 ? 1_555 150.1 ? 17 I ? AA IOD . ? B IOD 202 ? 1_555 PT ? Z PT . ? B PT 201 ? 1_555 CL ? KA CL . ? B CL 212 ? 1_555 113.8 ? 18 I ? BA IOD . ? B IOD 203 ? 1_555 PT ? Z PT . ? B PT 201 ? 1_555 CL ? KA CL . ? B CL 212 ? 1_555 75.8 ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 6 ? CYS A 127 ? CYS A 6 ? 1_555 CYS A 127 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 30 ? CYS A 115 ? CYS A 30 ? 1_555 CYS A 115 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 64 ? CYS A 80 ? CYS A 64 ? 1_555 CYS A 80 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 76 ? CYS A 94 ? CYS A 76 ? 1_555 CYS A 94 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 6 ? CYS B 127 ? CYS B 6 ? 1_555 CYS B 127 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 30 ? CYS B 115 ? CYS B 30 ? 1_555 CYS B 115 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS B 64 ? CYS B 80 ? CYS B 64 ? 1_555 CYS B 80 ? 1_555 SG SG . . . None 'Disulfide bridge' 8 CYS B 76 ? CYS B 94 ? CYS B 76 ? 1_555 CYS B 94 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 43 ? ASN A 46 ? THR A 43 ASN A 46 AA1 2 SER A 50 ? TYR A 53 ? SER A 50 TYR A 53 AA1 3 ILE A 58 ? ASN A 59 ? ILE A 58 ASN A 59 AA2 1 THR B 43 ? ARG B 45 ? THR B 43 ARG B 45 AA2 2 THR B 51 ? TYR B 53 ? THR B 51 TYR B 53 AA2 3 ILE B 58 ? ASN B 59 ? ILE B 58 ASN B 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASN A 44 ? N ASN A 44 O ASP A 52 ? O ASP A 52 AA1 2 3 N TYR A 53 ? N TYR A 53 O ILE A 58 ? O ILE A 58 AA2 1 2 N ASN B 44 ? N ASN B 44 O ASP B 52 ? O ASP B 52 AA2 2 3 N TYR B 53 ? N TYR B 53 O ILE B 58 ? O ILE B 58 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PT 201 ? 4 'binding site for residue PT A 201' AC2 Software A PT 202 ? 4 'binding site for residue PT A 202' AC3 Software A IOD 203 ? 3 'binding site for residue IOD A 203' AC4 Software A IOD 204 ? 4 'binding site for residue IOD A 204' AC5 Software A IOD 205 ? 3 'binding site for residue IOD A 205' AC6 Software A IOD 206 ? 2 'binding site for residue IOD A 206' AC7 Software A IOD 207 ? 3 'binding site for residue IOD A 207' AC8 Software A IOD 208 ? 1 'binding site for residue IOD A 208' AC9 Software A IOD 209 ? 2 'binding site for residue IOD A 209' AD1 Software A IOD 210 ? 1 'binding site for residue IOD A 210' AD2 Software A IOD 212 ? 5 'binding site for residue IOD A 212' AD3 Software A DMS 214 ? 5 'binding site for residue DMS A 214' AD4 Software A DMS 215 ? 4 'binding site for residue DMS A 215' AD5 Software A DMS 216 ? 5 'binding site for residue DMS A 216' AD6 Software A CL 217 ? 3 'binding site for residue CL A 217' AD7 Software A CL 218 ? 4 'binding site for residue CL A 218' AD8 Software A IOD 219 ? 3 'binding site for residue IOD A 219' AD9 Software A IOD 220 ? 3 'binding site for residue IOD A 220' AE1 Software A IOD 221 ? 1 'binding site for residue IOD A 221' AE2 Software A IOD 222 ? 1 'binding site for residue IOD A 222' AE3 Software A IOD 223 ? 2 'binding site for residue IOD A 223' AE4 Software B PT 201 ? 4 'binding site for residue PT B 201' AE5 Software B IOD 202 ? 3 'binding site for residue IOD B 202' AE6 Software B IOD 203 ? 4 'binding site for residue IOD B 203' AE7 Software B IOD 204 ? 1 'binding site for residue IOD B 204' AE8 Software B IOD 208 ? 1 'binding site for residue IOD B 208' AE9 Software B DMS 209 ? 3 'binding site for residue DMS B 209' AF1 Software B DMS 210 ? 5 'binding site for residue DMS B 210' AF2 Software B DMS 211 ? 3 'binding site for residue DMS B 211' AF3 Software B CL 212 ? 5 'binding site for residue CL B 212' AF4 Software B NA 213 ? 1 'binding site for residue NA B 213' AF5 Software B IOD 214 ? 1 'binding site for residue IOD B 214' AF6 Software B IOD 215 ? 2 'binding site for residue IOD B 215' AF7 Software B IOD 216 ? 1 'binding site for residue IOD B 216' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 15 ? HIS A 15 . ? 1_555 ? 2 AC1 4 IOD E . ? IOD A 203 . ? 1_555 ? 3 AC1 4 IOD F . ? IOD A 204 . ? 1_555 ? 4 AC1 4 CL S . ? CL A 217 . ? 1_555 ? 5 AC2 4 IOD G . ? IOD A 205 . ? 1_555 ? 6 AC2 4 IOD H . ? IOD A 206 . ? 1_555 ? 7 AC2 4 IOD I . ? IOD A 207 . ? 1_555 ? 8 AC2 4 CL T . ? CL A 218 . ? 1_555 ? 9 AC3 3 HIS A 15 ? HIS A 15 . ? 1_555 ? 10 AC3 3 PT C . ? PT A 201 . ? 1_555 ? 11 AC3 3 CL S . ? CL A 217 . ? 1_555 ? 12 AC4 4 HIS A 15 ? HIS A 15 . ? 1_555 ? 13 AC4 4 ASN A 93 ? ASN A 93 . ? 1_555 ? 14 AC4 4 PT C . ? PT A 201 . ? 1_555 ? 15 AC4 4 CL S . ? CL A 217 . ? 1_555 ? 16 AC5 3 ARG A 128 ? ARG A 128 . ? 1_555 ? 17 AC5 3 PT D . ? PT A 202 . ? 1_555 ? 18 AC5 3 CL T . ? CL A 218 . ? 1_555 ? 19 AC6 2 PT D . ? PT A 202 . ? 1_555 ? 20 AC6 2 IOD I . ? IOD A 207 . ? 1_555 ? 21 AC7 3 PT D . ? PT A 202 . ? 1_555 ? 22 AC7 3 IOD H . ? IOD A 206 . ? 1_555 ? 23 AC7 3 CL T . ? CL A 218 . ? 1_555 ? 24 AC8 1 IOD V . ? IOD A 220 . ? 1_455 ? 25 AC9 2 ASN A 74 ? ASN A 74 . ? 1_555 ? 26 AC9 2 LYS B 116 ? LYS B 116 . ? 1_456 ? 27 AD1 1 SER B 81 ? SER B 81 . ? 1_455 ? 28 AD2 5 SER A 24 ? SER A 24 . ? 1_555 ? 29 AD2 5 GLY A 26 ? GLY A 26 . ? 1_555 ? 30 AD2 5 GLN A 121 ? GLN A 121 . ? 1_555 ? 31 AD2 5 ILE A 124 ? ILE A 124 . ? 1_555 ? 32 AD2 5 GLN B 41 ? GLN B 41 . ? 1_455 ? 33 AD3 5 GLN A 57 ? GLN A 57 . ? 1_555 ? 34 AD3 5 ILE A 58 ? ILE A 58 . ? 1_555 ? 35 AD3 5 ASN A 59 ? ASN A 59 . ? 1_555 ? 36 AD3 5 ILE A 98 ? ILE A 98 . ? 1_555 ? 37 AD3 5 ALA A 107 ? ALA A 107 . ? 1_555 ? 38 AD4 4 ARG A 5 ? ARG A 5 . ? 1_555 ? 39 AD4 4 ALA A 122 ? ALA A 122 . ? 1_555 ? 40 AD4 4 TRP A 123 ? TRP A 123 . ? 1_555 ? 41 AD4 4 ARG A 125 ? ARG A 125 . ? 1_555 ? 42 AD5 5 ASP A 66 ? ASP A 66 . ? 1_555 ? 43 AD5 5 SER A 81 ? SER A 81 . ? 1_555 ? 44 AD5 5 ARG B 21 ? ARG B 21 . ? 1_556 ? 45 AD5 5 GLY B 22 ? GLY B 22 . ? 1_556 ? 46 AD5 5 ASN B 113 ? ASN B 113 . ? 1_456 ? 47 AD6 3 PT C . ? PT A 201 . ? 1_555 ? 48 AD6 3 IOD E . ? IOD A 203 . ? 1_555 ? 49 AD6 3 IOD F . ? IOD A 204 . ? 1_555 ? 50 AD7 4 ARG A 128 ? ARG A 128 . ? 1_555 ? 51 AD7 4 PT D . ? PT A 202 . ? 1_555 ? 52 AD7 4 IOD G . ? IOD A 205 . ? 1_555 ? 53 AD7 4 IOD I . ? IOD A 207 . ? 1_555 ? 54 AD8 3 ARG A 14 ? ARG A 14 . ? 1_555 ? 55 AD8 3 HIS A 15 ? HIS A 15 . ? 1_555 ? 56 AD8 3 ASP A 87 ? ASP A 87 . ? 1_555 ? 57 AD9 3 LYS A 96 ? LYS A 96 . ? 1_655 ? 58 AD9 3 VAL A 109 ? VAL A 109 . ? 1_555 ? 59 AD9 3 IOD J . ? IOD A 208 . ? 1_655 ? 60 AE1 1 TYR A 23 ? TYR A 23 . ? 1_555 ? 61 AE2 1 ILE A 78 ? ILE A 78 . ? 1_555 ? 62 AE3 2 TRP A 62 ? TRP A 62 . ? 1_555 ? 63 AE3 2 ARG A 73 ? ARG A 73 . ? 1_555 ? 64 AE4 4 HIS B 15 ? HIS B 15 . ? 1_555 ? 65 AE4 4 IOD AA . ? IOD B 202 . ? 1_555 ? 66 AE4 4 IOD BA . ? IOD B 203 . ? 1_555 ? 67 AE4 4 CL KA . ? CL B 212 . ? 1_555 ? 68 AE5 3 ARG B 14 ? ARG B 14 . ? 1_555 ? 69 AE5 3 HIS B 15 ? HIS B 15 . ? 1_555 ? 70 AE5 3 PT Z . ? PT B 201 . ? 1_555 ? 71 AE6 4 HIS B 15 ? HIS B 15 . ? 1_555 ? 72 AE6 4 LYS B 96 ? LYS B 96 . ? 1_555 ? 73 AE6 4 PT Z . ? PT B 201 . ? 1_555 ? 74 AE6 4 CL KA . ? CL B 212 . ? 1_555 ? 75 AE7 1 LYS A 116 ? LYS A 116 . ? 1_555 ? 76 AE8 1 ASN B 65 ? ASN B 65 . ? 1_555 ? 77 AE9 3 ARG B 5 ? ARG B 5 . ? 1_555 ? 78 AE9 3 ALA B 122 ? ALA B 122 . ? 1_555 ? 79 AE9 3 TRP B 123 ? TRP B 123 . ? 1_555 ? 80 AF1 5 ILE B 58 ? ILE B 58 . ? 1_555 ? 81 AF1 5 ASN B 59 ? ASN B 59 . ? 1_555 ? 82 AF1 5 TRP B 63 ? TRP B 63 . ? 1_555 ? 83 AF1 5 ALA B 107 ? ALA B 107 . ? 1_555 ? 84 AF1 5 TRP B 108 ? TRP B 108 . ? 1_555 ? 85 AF2 3 GLN B 121 ? GLN B 121 . ? 1_555 ? 86 AF2 3 ILE B 124 ? ILE B 124 . ? 1_555 ? 87 AF2 3 ARG B 125 ? ARG B 125 . ? 1_555 ? 88 AF3 5 HIS B 15 ? HIS B 15 . ? 1_555 ? 89 AF3 5 LYS B 96 ? LYS B 96 . ? 1_555 ? 90 AF3 5 PT Z . ? PT B 201 . ? 1_555 ? 91 AF3 5 IOD BA . ? IOD B 203 . ? 1_555 ? 92 AF3 5 NA LA . ? NA B 213 . ? 1_555 ? 93 AF4 1 CL KA . ? CL B 212 . ? 1_555 ? 94 AF5 1 LEU B 129 ? LEU B 129 . ? 1_555 ? 95 AF6 2 ASN A 103 ? ASN A 103 . ? 1_655 ? 96 AF6 2 ASN A 106 ? ASN A 106 . ? 1_655 ? 97 AF7 1 GLY B 71 ? GLY B 71 . ? 1_555 ? # _pdbx_entry_details.entry_id 5M1Y _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 62 ? ? -133.23 -33.75 2 1 ASP B 18 ? ? -52.47 106.73 3 1 ARG B 73 ? ? 55.85 -119.92 4 1 CYS B 115 ? ? -134.74 -46.23 5 1 ARG B 128 ? ? 39.20 48.24 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DMS S S N N 89 DMS O O N N 90 DMS C1 C N N 91 DMS C2 C N N 92 DMS H11 H N N 93 DMS H12 H N N 94 DMS H13 H N N 95 DMS H21 H N N 96 DMS H22 H N N 97 DMS H23 H N N 98 GLN N N N N 99 GLN CA C N S 100 GLN C C N N 101 GLN O O N N 102 GLN CB C N N 103 GLN CG C N N 104 GLN CD C N N 105 GLN OE1 O N N 106 GLN NE2 N N N 107 GLN OXT O N N 108 GLN H H N N 109 GLN H2 H N N 110 GLN HA H N N 111 GLN HB2 H N N 112 GLN HB3 H N N 113 GLN HG2 H N N 114 GLN HG3 H N N 115 GLN HE21 H N N 116 GLN HE22 H N N 117 GLN HXT H N N 118 GLU N N N N 119 GLU CA C N S 120 GLU C C N N 121 GLU O O N N 122 GLU CB C N N 123 GLU CG C N N 124 GLU CD C N N 125 GLU OE1 O N N 126 GLU OE2 O N N 127 GLU OXT O N N 128 GLU H H N N 129 GLU H2 H N N 130 GLU HA H N N 131 GLU HB2 H N N 132 GLU HB3 H N N 133 GLU HG2 H N N 134 GLU HG3 H N N 135 GLU HE2 H N N 136 GLU HXT H N N 137 GLY N N N N 138 GLY CA C N N 139 GLY C C N N 140 GLY O O N N 141 GLY OXT O N N 142 GLY H H N N 143 GLY H2 H N N 144 GLY HA2 H N N 145 GLY HA3 H N N 146 GLY HXT H N N 147 HIS N N N N 148 HIS CA C N S 149 HIS C C N N 150 HIS O O N N 151 HIS CB C N N 152 HIS CG C Y N 153 HIS ND1 N Y N 154 HIS CD2 C Y N 155 HIS CE1 C Y N 156 HIS NE2 N Y N 157 HIS OXT O N N 158 HIS H H N N 159 HIS H2 H N N 160 HIS HA H N N 161 HIS HB2 H N N 162 HIS HB3 H N N 163 HIS HD1 H N N 164 HIS HD2 H N N 165 HIS HE1 H N N 166 HIS HE2 H N N 167 HIS HXT H N N 168 HOH O O N N 169 HOH H1 H N N 170 HOH H2 H N N 171 ILE N N N N 172 ILE CA C N S 173 ILE C C N N 174 ILE O O N N 175 ILE CB C N S 176 ILE CG1 C N N 177 ILE CG2 C N N 178 ILE CD1 C N N 179 ILE OXT O N N 180 ILE H H N N 181 ILE H2 H N N 182 ILE HA H N N 183 ILE HB H N N 184 ILE HG12 H N N 185 ILE HG13 H N N 186 ILE HG21 H N N 187 ILE HG22 H N N 188 ILE HG23 H N N 189 ILE HD11 H N N 190 ILE HD12 H N N 191 ILE HD13 H N N 192 ILE HXT H N N 193 IOD I I N N 194 LEU N N N N 195 LEU CA C N S 196 LEU C C N N 197 LEU O O N N 198 LEU CB C N N 199 LEU CG C N N 200 LEU CD1 C N N 201 LEU CD2 C N N 202 LEU OXT O N N 203 LEU H H N N 204 LEU H2 H N N 205 LEU HA H N N 206 LEU HB2 H N N 207 LEU HB3 H N N 208 LEU HG H N N 209 LEU HD11 H N N 210 LEU HD12 H N N 211 LEU HD13 H N N 212 LEU HD21 H N N 213 LEU HD22 H N N 214 LEU HD23 H N N 215 LEU HXT H N N 216 LYS N N N N 217 LYS CA C N S 218 LYS C C N N 219 LYS O O N N 220 LYS CB C N N 221 LYS CG C N N 222 LYS CD C N N 223 LYS CE C N N 224 LYS NZ N N N 225 LYS OXT O N N 226 LYS H H N N 227 LYS H2 H N N 228 LYS HA H N N 229 LYS HB2 H N N 230 LYS HB3 H N N 231 LYS HG2 H N N 232 LYS HG3 H N N 233 LYS HD2 H N N 234 LYS HD3 H N N 235 LYS HE2 H N N 236 LYS HE3 H N N 237 LYS HZ1 H N N 238 LYS HZ2 H N N 239 LYS HZ3 H N N 240 LYS HXT H N N 241 MET N N N N 242 MET CA C N S 243 MET C C N N 244 MET O O N N 245 MET CB C N N 246 MET CG C N N 247 MET SD S N N 248 MET CE C N N 249 MET OXT O N N 250 MET H H N N 251 MET H2 H N N 252 MET HA H N N 253 MET HB2 H N N 254 MET HB3 H N N 255 MET HG2 H N N 256 MET HG3 H N N 257 MET HE1 H N N 258 MET HE2 H N N 259 MET HE3 H N N 260 MET HXT H N N 261 NA NA NA N N 262 PHE N N N N 263 PHE CA C N S 264 PHE C C N N 265 PHE O O N N 266 PHE CB C N N 267 PHE CG C Y N 268 PHE CD1 C Y N 269 PHE CD2 C Y N 270 PHE CE1 C Y N 271 PHE CE2 C Y N 272 PHE CZ C Y N 273 PHE OXT O N N 274 PHE H H N N 275 PHE H2 H N N 276 PHE HA H N N 277 PHE HB2 H N N 278 PHE HB3 H N N 279 PHE HD1 H N N 280 PHE HD2 H N N 281 PHE HE1 H N N 282 PHE HE2 H N N 283 PHE HZ H N N 284 PHE HXT H N N 285 PRO N N N N 286 PRO CA C N S 287 PRO C C N N 288 PRO O O N N 289 PRO CB C N N 290 PRO CG C N N 291 PRO CD C N N 292 PRO OXT O N N 293 PRO H H N N 294 PRO HA H N N 295 PRO HB2 H N N 296 PRO HB3 H N N 297 PRO HG2 H N N 298 PRO HG3 H N N 299 PRO HD2 H N N 300 PRO HD3 H N N 301 PRO HXT H N N 302 PT PT PT N N 303 SER N N N N 304 SER CA C N S 305 SER C C N N 306 SER O O N N 307 SER CB C N N 308 SER OG O N N 309 SER OXT O N N 310 SER H H N N 311 SER H2 H N N 312 SER HA H N N 313 SER HB2 H N N 314 SER HB3 H N N 315 SER HG H N N 316 SER HXT H N N 317 THR N N N N 318 THR CA C N S 319 THR C C N N 320 THR O O N N 321 THR CB C N R 322 THR OG1 O N N 323 THR CG2 C N N 324 THR OXT O N N 325 THR H H N N 326 THR H2 H N N 327 THR HA H N N 328 THR HB H N N 329 THR HG1 H N N 330 THR HG21 H N N 331 THR HG22 H N N 332 THR HG23 H N N 333 THR HXT H N N 334 TRP N N N N 335 TRP CA C N S 336 TRP C C N N 337 TRP O O N N 338 TRP CB C N N 339 TRP CG C Y N 340 TRP CD1 C Y N 341 TRP CD2 C Y N 342 TRP NE1 N Y N 343 TRP CE2 C Y N 344 TRP CE3 C Y N 345 TRP CZ2 C Y N 346 TRP CZ3 C Y N 347 TRP CH2 C Y N 348 TRP OXT O N N 349 TRP H H N N 350 TRP H2 H N N 351 TRP HA H N N 352 TRP HB2 H N N 353 TRP HB3 H N N 354 TRP HD1 H N N 355 TRP HE1 H N N 356 TRP HE3 H N N 357 TRP HZ2 H N N 358 TRP HZ3 H N N 359 TRP HH2 H N N 360 TRP HXT H N N 361 TYR N N N N 362 TYR CA C N S 363 TYR C C N N 364 TYR O O N N 365 TYR CB C N N 366 TYR CG C Y N 367 TYR CD1 C Y N 368 TYR CD2 C Y N 369 TYR CE1 C Y N 370 TYR CE2 C Y N 371 TYR CZ C Y N 372 TYR OH O N N 373 TYR OXT O N N 374 TYR H H N N 375 TYR H2 H N N 376 TYR HA H N N 377 TYR HB2 H N N 378 TYR HB3 H N N 379 TYR HD1 H N N 380 TYR HD2 H N N 381 TYR HE1 H N N 382 TYR HE2 H N N 383 TYR HH H N N 384 TYR HXT H N N 385 VAL N N N N 386 VAL CA C N S 387 VAL C C N N 388 VAL O O N N 389 VAL CB C N N 390 VAL CG1 C N N 391 VAL CG2 C N N 392 VAL OXT O N N 393 VAL H H N N 394 VAL H2 H N N 395 VAL HA H N N 396 VAL HB H N N 397 VAL HG11 H N N 398 VAL HG12 H N N 399 VAL HG13 H N N 400 VAL HG21 H N N 401 VAL HG22 H N N 402 VAL HG23 H N N 403 VAL HXT H N N 404 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DMS S O doub N N 83 DMS S C1 sing N N 84 DMS S C2 sing N N 85 DMS C1 H11 sing N N 86 DMS C1 H12 sing N N 87 DMS C1 H13 sing N N 88 DMS C2 H21 sing N N 89 DMS C2 H22 sing N N 90 DMS C2 H23 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PRO N CA sing N N 269 PRO N CD sing N N 270 PRO N H sing N N 271 PRO CA C sing N N 272 PRO CA CB sing N N 273 PRO CA HA sing N N 274 PRO C O doub N N 275 PRO C OXT sing N N 276 PRO CB CG sing N N 277 PRO CB HB2 sing N N 278 PRO CB HB3 sing N N 279 PRO CG CD sing N N 280 PRO CG HG2 sing N N 281 PRO CG HG3 sing N N 282 PRO CD HD2 sing N N 283 PRO CD HD3 sing N N 284 PRO OXT HXT sing N N 285 SER N CA sing N N 286 SER N H sing N N 287 SER N H2 sing N N 288 SER CA C sing N N 289 SER CA CB sing N N 290 SER CA HA sing N N 291 SER C O doub N N 292 SER C OXT sing N N 293 SER CB OG sing N N 294 SER CB HB2 sing N N 295 SER CB HB3 sing N N 296 SER OG HG sing N N 297 SER OXT HXT sing N N 298 THR N CA sing N N 299 THR N H sing N N 300 THR N H2 sing N N 301 THR CA C sing N N 302 THR CA CB sing N N 303 THR CA HA sing N N 304 THR C O doub N N 305 THR C OXT sing N N 306 THR CB OG1 sing N N 307 THR CB CG2 sing N N 308 THR CB HB sing N N 309 THR OG1 HG1 sing N N 310 THR CG2 HG21 sing N N 311 THR CG2 HG22 sing N N 312 THR CG2 HG23 sing N N 313 THR OXT HXT sing N N 314 TRP N CA sing N N 315 TRP N H sing N N 316 TRP N H2 sing N N 317 TRP CA C sing N N 318 TRP CA CB sing N N 319 TRP CA HA sing N N 320 TRP C O doub N N 321 TRP C OXT sing N N 322 TRP CB CG sing N N 323 TRP CB HB2 sing N N 324 TRP CB HB3 sing N N 325 TRP CG CD1 doub Y N 326 TRP CG CD2 sing Y N 327 TRP CD1 NE1 sing Y N 328 TRP CD1 HD1 sing N N 329 TRP CD2 CE2 doub Y N 330 TRP CD2 CE3 sing Y N 331 TRP NE1 CE2 sing Y N 332 TRP NE1 HE1 sing N N 333 TRP CE2 CZ2 sing Y N 334 TRP CE3 CZ3 doub Y N 335 TRP CE3 HE3 sing N N 336 TRP CZ2 CH2 doub Y N 337 TRP CZ2 HZ2 sing N N 338 TRP CZ3 CH2 sing Y N 339 TRP CZ3 HZ3 sing N N 340 TRP CH2 HH2 sing N N 341 TRP OXT HXT sing N N 342 TYR N CA sing N N 343 TYR N H sing N N 344 TYR N H2 sing N N 345 TYR CA C sing N N 346 TYR CA CB sing N N 347 TYR CA HA sing N N 348 TYR C O doub N N 349 TYR C OXT sing N N 350 TYR CB CG sing N N 351 TYR CB HB2 sing N N 352 TYR CB HB3 sing N N 353 TYR CG CD1 doub Y N 354 TYR CG CD2 sing Y N 355 TYR CD1 CE1 sing Y N 356 TYR CD1 HD1 sing N N 357 TYR CD2 CE2 doub Y N 358 TYR CD2 HD2 sing N N 359 TYR CE1 CZ doub Y N 360 TYR CE1 HE1 sing N N 361 TYR CE2 CZ sing Y N 362 TYR CE2 HE2 sing N N 363 TYR CZ OH sing N N 364 TYR OH HH sing N N 365 TYR OXT HXT sing N N 366 VAL N CA sing N N 367 VAL N H sing N N 368 VAL N H2 sing N N 369 VAL CA C sing N N 370 VAL CA CB sing N N 371 VAL CA HA sing N N 372 VAL C O doub N N 373 VAL C OXT sing N N 374 VAL CB CG1 sing N N 375 VAL CB CG2 sing N N 376 VAL CB HB sing N N 377 VAL CG1 HG11 sing N N 378 VAL CG1 HG12 sing N N 379 VAL CG1 HG13 sing N N 380 VAL CG2 HG21 sing N N 381 VAL CG2 HG22 sing N N 382 VAL CG2 HG23 sing N N 383 VAL OXT HXT sing N N 384 # _pdbx_audit_support.funding_organization 'Engineering and Physical Sciences Research Council' _pdbx_audit_support.country 'United Kingdom' _pdbx_audit_support.grant_number ? _pdbx_audit_support.ordinal 1 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4OW9 _pdbx_initial_refinement_model.details ? # _pdbx_related_exp_data_set.ordinal 1 _pdbx_related_exp_data_set.data_reference 10.15127/1.266903 _pdbx_related_exp_data_set.metadata_reference 10.15127/1.266903 _pdbx_related_exp_data_set.data_set_type 'diffraction image data' _pdbx_related_exp_data_set.details ? # _atom_sites.entry_id 5M1Y _atom_sites.fract_transf_matrix[1][1] 0.036696 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000591 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015991 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016957 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL H I N NA O PT S # loop_