HEADER PROTEIN BINDING 13-OCT-16 5M2S TITLE R. FLAVEFACIENS' THIRD SCAB COHESIN IN COMPLEX WITH A GROUP 1 DOCKERIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE CELLULOSOMAL SCAFFOLDIN PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SCAA TYPE I COHESIN DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: DOC8: TYPE I DOCKERIN REPEAT DOMAIN FROM FAMILY 9 GLYCOSIDE COMPND 8 HYDROLASE WP_009982745[RUMINOCOCCUS FLAVEFACIENS]; COMPND 9 CHAIN: B; COMPND 10 FRAGMENT: TYPE I DOCKERIN DOMAIN; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RUMINOCOCCUS FLAVEFACIENS; SOURCE 3 ORGANISM_TAXID: 1265; SOURCE 4 GENE: SCAA; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: RUMINOCOCCUS FLAVEFACIENS FD-1; SOURCE 11 ORGANISM_TAXID: 641112; SOURCE 12 GENE: GLYCOSIDE HYDROLASE FAMILY 9; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 14 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 15 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS COHESIN, DOCKERIN, COMPLEX, CELLULOSOME, R. FLAVEFACIENS, CELL KEYWDS 2 ADHESION, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR P.BULE,S.NAJMUDIN,A.L.CARVALHO,C.M.G.A.FONTES REVDAT 2 17-JAN-24 5M2S 1 REMARK LINK REVDAT 1 05-JUL-17 5M2S 0 JRNL AUTH P.BULE,V.D.ALVES,V.ISRAELI-RUIMY,A.L.CARVALHO,L.M.FERREIRA, JRNL AUTH 2 S.P.SMITH,H.J.GILBERT,S.NAJMUDIN,E.A.BAYER,C.M.FONTES JRNL TITL ASSEMBLY OF RUMINOCOCCUS FLAVEFACIENS CELLULOSOME REVEALED JRNL TITL 2 BY STRUCTURES OF TWO COHESIN-DOCKERIN COMPLEXES. JRNL REF SCI REP V. 7 759 2017 JRNL REFN ESSN 2045-2322 JRNL PMID 28389644 JRNL DOI 10.1038/S41598-017-00919-W REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 25318 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.135 REMARK 3 R VALUE (WORKING SET) : 0.134 REMARK 3 FREE R VALUE : 0.157 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.400 REMARK 3 FREE R VALUE TEST SET COUNT : 1163 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1615 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.04 REMARK 3 BIN R VALUE (WORKING SET) : 0.1680 REMARK 3 BIN FREE R VALUE SET COUNT : 73 REMARK 3 BIN FREE R VALUE : 0.1860 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1641 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 323 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.59000 REMARK 3 B22 (A**2) : -0.10000 REMARK 3 B33 (A**2) : 0.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.080 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.077 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.048 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.672 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.960 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1747 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1677 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2387 ; 1.420 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3891 ; 0.772 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 242 ; 6.258 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 76 ;37.974 ;27.500 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 293 ;10.033 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 1 ;24.795 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 286 ; 0.086 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2029 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 358 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 902 ; 0.845 ; 0.723 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 901 ; 0.845 ; 0.721 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1130 ; 1.438 ; 1.072 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 143 REMARK 3 ORIGIN FOR THE GROUP (A): 6.9163 20.3883 -13.8221 REMARK 3 T TENSOR REMARK 3 T11: 0.0136 T22: 0.0099 REMARK 3 T33: 0.0078 T12: 0.0033 REMARK 3 T13: 0.0018 T23: -0.0069 REMARK 3 L TENSOR REMARK 3 L11: 0.3837 L22: 0.2548 REMARK 3 L33: 0.2042 L12: 0.2597 REMARK 3 L13: 0.0900 L23: 0.1774 REMARK 3 S TENSOR REMARK 3 S11: 0.0020 S12: 0.0203 S13: -0.0368 REMARK 3 S21: -0.0016 S22: 0.0159 S23: -0.0314 REMARK 3 S31: -0.0158 S32: 0.0021 S33: -0.0179 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 24 B 102 REMARK 3 ORIGIN FOR THE GROUP (A): -14.2996 7.0042 -16.3757 REMARK 3 T TENSOR REMARK 3 T11: 0.0094 T22: 0.0008 REMARK 3 T33: 0.0106 T12: -0.0011 REMARK 3 T13: 0.0014 T23: -0.0018 REMARK 3 L TENSOR REMARK 3 L11: 0.4692 L22: 0.3277 REMARK 3 L33: 0.4933 L12: 0.3017 REMARK 3 L13: 0.1010 L23: 0.2227 REMARK 3 S TENSOR REMARK 3 S11: -0.0107 S12: 0.0102 S13: -0.0361 REMARK 3 S21: 0.0172 S22: 0.0053 S23: -0.0137 REMARK 3 S31: 0.0040 S32: -0.0031 S33: 0.0054 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.30 REMARK 3 ION PROBE RADIUS : 0.70 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 5M2S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1200001813. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-OCT-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98402 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.3.11 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26498 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 42.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.5 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 84.6 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.28700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5M2O REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M CALCIUM ACETATE, 0.2 M SODIUM REMARK 280 CACODYLATE TRIHYDRATE, 18% W/V PEG 8000, PH 6.5, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.24500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10280 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 VAL A 144 REMARK 465 ASP A 145 REMARK 465 ASP A 146 REMARK 465 PRO A 147 REMARK 465 LEU A 148 REMARK 465 GLU A 149 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 SER B 11 REMARK 465 SER B 12 REMARK 465 GLY B 13 REMARK 465 LEU B 14 REMARK 465 VAL B 15 REMARK 465 PRO B 16 REMARK 465 ARG B 17 REMARK 465 GLY B 18 REMARK 465 SER B 19 REMARK 465 HIS B 20 REMARK 465 MET B 21 REMARK 465 ALA B 22 REMARK 465 SER B 23 REMARK 465 GLU B 103 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 328 O HOH B 319 1.91 REMARK 500 O HOH B 329 O HOH B 384 1.97 REMARK 500 O HOH A 316 O HOH A 381 2.05 REMARK 500 O HOH B 347 O HOH B 354 2.12 REMARK 500 N PRO A 3 O HOH A 301 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 123 -137.08 -152.76 REMARK 500 ASN A 135 -136.65 63.69 REMARK 500 LEU B 27 119.72 -160.75 REMARK 500 HIS B 63 30.13 -99.54 REMARK 500 ASN B 78 127.34 -39.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 522 DISTANCE = 5.89 ANGSTROMS REMARK 525 HOH A 523 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH B 400 DISTANCE = 5.89 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 133 O REMARK 620 2 HOH A 329 O 76.3 REMARK 620 3 HOH A 422 O 75.0 151.1 REMARK 620 4 HOH A 459 O 82.5 94.0 85.8 REMARK 620 5 GLU B 77 OE1 45.9 93.6 68.7 38.2 REMARK 620 6 HOH B 329 O 148.1 75.3 133.3 85.4 122.3 REMARK 620 7 HOH B 380 O 147.7 135.6 72.8 97.3 120.9 63.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 202 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 30 OD1 REMARK 620 2 ASN B 32 OD1 82.7 REMARK 620 3 ASP B 34 OD1 84.2 79.3 REMARK 620 4 ILE B 36 O 86.8 156.8 79.1 REMARK 620 5 ASP B 41 OD1 89.9 74.4 153.6 126.3 REMARK 620 6 ASP B 41 OD2 115.9 122.4 150.6 80.8 53.3 REMARK 620 7 HOH B 317 O 160.5 83.3 79.9 101.1 99.4 83.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 201 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 74 OD1 REMARK 620 2 ASN B 76 O 85.9 REMARK 620 3 ASN B 80 OD1 90.4 87.0 REMARK 620 4 GLY B 81 O 80.6 160.7 79.4 REMARK 620 5 ASP B 86 OD1 93.1 78.7 165.0 115.5 REMARK 620 6 ASP B 86 OD2 116.5 124.4 137.8 74.3 51.8 REMARK 620 7 HOH B 312 O 162.8 78.3 82.3 113.0 90.2 78.5 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5M2O RELATED DB: PDB REMARK 900 RELATED ID: 5AOZ RELATED DB: PDB DBREF 5M2S A 2 147 UNP A0AEF3 A0AEF3_RUMFL 465 610 DBREF 5M2S B 1 103 PDB 5M2S 5M2S 1 103 SEQADV 5M2S MET A 1 UNP A0AEF3 INITIATING METHIONINE SEQADV 5M2S LEU A 148 UNP A0AEF3 EXPRESSION TAG SEQADV 5M2S GLU A 149 UNP A0AEF3 EXPRESSION TAG SEQRES 1 A 149 MET GLN PRO VAL ALA ASN ALA ASP VAL ILE PHE ASP PHE SEQRES 2 A 149 GLY ASN TYR GLU ALA LYS ALA GLY GLU GLU VAL GLN VAL SEQRES 3 A 149 ASP VAL THR VAL ASP SER LYS ASN LYS ALA ILE SER ALA SEQRES 4 A 149 MET ASP VAL VAL PHE ALA ILE ASP SER PRO LEU THR ILE SEQRES 5 A 149 ASP GLU ILE ASP LYS GLU SER LEU ALA PHE LYS THR THR SEQRES 6 A 149 ALA MET THR ASN ILE ALA ILE LEU GLY ALA ASN PHE LYS SEQRES 7 A 149 SER LEU ASP ASP LYS GLY GLU PRO LEU VAL PRO THR LYS SEQRES 8 A 149 ASP PRO VAL PHE THR LEU TYR VAL THR VAL PRO ALA THR SEQRES 9 A 149 THR PRO ASP GLY VAL TYR ASN VAL GLY PHE GLY ASN LYS SEQRES 10 A 149 CYS GLU VAL HIS LYS SER ASN ASP GLY SER LYS TYR SER SEQRES 11 A 149 SER THR ALA ILE ASN GLY LYS ILE LYS VAL GLY ASN PRO SEQRES 12 A 149 VAL ASP ASP PRO LEU GLU SEQRES 1 B 103 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 103 LEU VAL PRO ARG GLY SER HIS MET ALA SER ASN VAL THR SEQRES 3 B 103 LEU TRP GLY ASP ALA ASN CYS ASP GLY ILE VAL ASP ILE SEQRES 4 B 103 SER ASP ALA VAL ILE ILE MET GLN SER LEU SER ASN PRO SEQRES 5 B 103 SER LYS PHE GLY ARG ASN GLY ASN ASP GLU HIS HIS ILE SEQRES 6 B 103 THR ALA GLN GLY GLU LEU ASN GLY ASP VAL ASN GLU ASN SEQRES 7 B 103 GLY ASN GLY ILE THR ASN ALA ASP ALA LEU ALA ILE GLN SEQRES 8 B 103 LYS TYR LEU LEU ASN LEU ILE GLY ASN LEU THR GLU HET CA A 201 1 HET GOL A 202 6 HET GOL A 203 6 HET CA B 201 1 HET CA B 202 1 HET GOL B 203 6 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CA 3(CA 2+) FORMUL 4 GOL 3(C3 H8 O3) FORMUL 9 HOH *323(H2 O) HELIX 1 AA1 LEU A 60 LYS A 63 5 4 HELIX 2 AA2 ILE A 70 ILE A 72 5 3 HELIX 3 AA3 ASP B 38 ASN B 51 1 14 HELIX 4 AA4 ASN B 51 GLY B 56 1 6 HELIX 5 AA5 THR B 66 GLY B 73 1 8 HELIX 6 AA6 THR B 83 LEU B 95 1 13 SHEET 1 AA1 5 THR A 51 ILE A 55 0 SHEET 2 AA1 5 PHE A 95 THR A 100 -1 O TYR A 98 N GLU A 54 SHEET 3 AA1 5 GLU A 23 ASP A 31 -1 N VAL A 24 O VAL A 99 SHEET 4 AA1 5 VAL A 9 ASP A 12 -1 N ILE A 10 O ASP A 31 SHEET 5 AA1 5 SER A 131 ILE A 134 1 O THR A 132 N PHE A 11 SHEET 1 AA2 6 TYR A 16 ALA A 18 0 SHEET 2 AA2 6 LYS A 137 VAL A 140 1 O LYS A 139 N TYR A 16 SHEET 3 AA2 6 GLY A 108 HIS A 121 -1 N GLY A 108 O VAL A 140 SHEET 4 AA2 6 ALA A 39 ILE A 46 -1 N VAL A 43 O GLY A 115 SHEET 5 AA2 6 GLY A 74 LYS A 78 -1 O ALA A 75 N VAL A 42 SHEET 6 AA2 6 MET A 67 ASN A 69 -1 N MET A 67 O ASN A 76 SHEET 1 AA3 4 TYR A 16 ALA A 18 0 SHEET 2 AA3 4 LYS A 137 VAL A 140 1 O LYS A 139 N TYR A 16 SHEET 3 AA3 4 GLY A 108 HIS A 121 -1 N GLY A 108 O VAL A 140 SHEET 4 AA3 4 LYS A 128 TYR A 129 -1 O TYR A 129 N VAL A 120 SHEET 1 AA4 2 GLU A 58 SER A 59 0 SHEET 2 AA4 2 THR A 64 THR A 65 -1 O THR A 64 N SER A 59 LINK O ALA A 133 CA CA A 201 1555 1555 2.38 LINK CA CA A 201 O HOH A 329 1555 1555 2.49 LINK CA CA A 201 O HOH A 422 1555 1555 2.42 LINK CA CA A 201 O HOH A 459 1555 1555 2.38 LINK CA CA A 201 OE1 GLU B 77 1455 1555 2.40 LINK CA CA A 201 O HOH B 329 1555 1655 2.43 LINK CA CA A 201 O HOH B 380 1555 1655 2.41 LINK OD1 ASP B 30 CA CA B 202 1555 1555 2.27 LINK OD1 ASN B 32 CA CA B 202 1555 1555 2.37 LINK OD1 ASP B 34 CA CA B 202 1555 1555 2.34 LINK O ILE B 36 CA CA B 202 1555 1555 2.26 LINK OD1 ASP B 41 CA CA B 202 1555 1555 2.45 LINK OD2 ASP B 41 CA CA B 202 1555 1555 2.46 LINK OD1 ASP B 74 CA CA B 201 1555 1555 2.28 LINK O ASN B 76 CA CA B 201 1555 1555 2.37 LINK OD1 ASN B 80 CA CA B 201 1555 1555 2.39 LINK O GLY B 81 CA CA B 201 1555 1555 2.32 LINK OD1 ASP B 86 CA CA B 201 1555 1555 2.53 LINK OD2 ASP B 86 CA CA B 201 1555 1555 2.48 LINK CA CA B 201 O HOH B 312 1555 1555 2.42 LINK CA CA B 202 O HOH B 317 1555 1555 2.39 CISPEP 1 SER A 48 PRO A 49 0 6.41 CISPEP 2 SER A 48 PRO A 49 0 8.45 CISPEP 3 LEU B 101 THR B 102 0 -5.08 SITE 1 AC1 7 ALA A 133 HOH A 329 HOH A 422 HOH A 459 SITE 2 AC1 7 GLU B 77 HOH B 329 HOH B 380 SITE 1 AC2 8 VAL A 30 ASP A 31 SER A 32 LYS A 33 SITE 2 AC2 8 ASN A 34 PRO A 89 THR A 90 LYS A 91 SITE 1 AC3 7 ILE A 46 ASP A 47 ASN A 111 GLY A 113 SITE 2 AC3 7 PHE A 114 HOH A 340 HOH A 447 SITE 1 AC4 6 ASP B 74 ASN B 76 ASN B 80 GLY B 81 SITE 2 AC4 6 ASP B 86 HOH B 312 SITE 1 AC5 6 ASP B 30 ASN B 32 ASP B 34 ILE B 36 SITE 2 AC5 6 ASP B 41 HOH B 317 SITE 1 AC6 6 TYR B 93 LEU B 94 ASN B 96 HOH B 307 SITE 2 AC6 6 HOH B 313 HOH B 338 CRYST1 45.610 64.490 47.670 90.00 116.72 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021925 0.000000 0.011037 0.00000 SCALE2 0.000000 0.015506 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023486 0.00000