HEADER ISOMERASE 18-OCT-16 5M4D TITLE ALPHA-AMINO EPSILON-CAPROLACTAM RACEMASE K241A MUTANT IN COMPLEX WITH TITLE 2 D-ACL (EXTERNAL ALDIMINE) COMPND MOL_ID: 1; COMPND 2 MOLECULE: AMINOTRANSFERASE CLASS-III; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHIZOBIUM FREIREI PRF 81; SOURCE 3 ORGANISM_TAXID: 363754; SOURCE 4 GENE: RHSP_08934; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET-YSBLIC-3C KEYWDS PLP, RACEMASE, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.FRESE,P.W.SUTTON,J.P.TURKENBURG,G.GROGAN REVDAT 2 17-JAN-24 5M4D 1 REMARK REVDAT 1 19-APR-17 5M4D 0 JRNL AUTH A.FRESE,P.W.SUTTON,J.P.TURKENBURG,G.GROGAN JRNL TITL SNAPSHOTS OF THE CATALYTIC CYCLE OF THE INDUSTRIAL ENZYME JRNL TITL 2 ALPHA-AMINO-EPSILON-CAPROLACTAM RACEMASE (ACLR) OBSERVED JRNL TITL 3 USING X-RAY CRYSTALLOGRAPHY JRNL REF ACS CATALYSIS V. 7 1045 2017 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/ACSCATAL.6B03056 REMARK 2 REMARK 2 RESOLUTION. 1.93 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.93 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 55.27 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 25058 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1281 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.93 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1825 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.54 REMARK 3 BIN R VALUE (WORKING SET) : 0.2550 REMARK 3 BIN FREE R VALUE SET COUNT : 115 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3201 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 103 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 14.42 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04000 REMARK 3 B22 (A**2) : -1.50000 REMARK 3 B33 (A**2) : 1.19000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.21000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.204 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.181 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.150 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.368 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3315 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3187 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4501 ; 2.014 ; 1.980 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7305 ; 1.157 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 442 ; 6.844 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 128 ;32.985 ;23.047 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 490 ;15.142 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 25 ;19.411 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 510 ; 0.127 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3827 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 734 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1765 ; 0.924 ; 1.349 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1764 ; 0.924 ; 1.349 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2205 ; 1.391 ; 2.019 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2206 ; 1.391 ; 2.019 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1550 ; 1.373 ; 1.526 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1550 ; 1.373 ; 1.526 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2296 ; 2.076 ; 2.216 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3793 ; 3.306 ;11.193 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3794 ; 3.306 ;11.196 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 5M4D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-OCT-16. REMARK 100 THE DEPOSITION ID IS D_1200001913. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 120 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29415 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 55.270 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.22000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 1.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.91 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.88000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2ZUK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 36.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.95 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MGCL2, 25 % PEG 3350, 0.1 MM REMARK 280 HEPES (PH 7.0)., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 43.05000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.74500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 43.05000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.74500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 62.61543 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 53.60098 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 637 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 283 CG CD OE1 OE2 REMARK 470 ARG A 324 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 335 CZ NH1 NH2 REMARK 470 ARG A 339 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 362 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 347 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 347 NE - CZ - NH2 ANGL. DEV. = -4.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 71 67.35 -150.31 REMARK 500 SER A 209 -70.57 -87.55 REMARK 500 SER A 209 -70.23 -87.94 REMARK 500 LEU A 213 63.84 36.25 REMARK 500 ALA A 245 -19.44 83.59 REMARK 500 LYS A 267 -102.89 34.42 REMARK 500 LEU A 351 40.42 -101.53 REMARK 500 ALA A 367 75.75 -111.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 7F7 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 505 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 5M46 RELATED DB: PDB REMARK 900 ENZYME IN COMPLEX WITH PLP ONLY DBREF 5M4D A 1 436 UNP N6UXY4 N6UXY4_9RHIZ 1 436 SEQADV 5M4D GLY A -2 UNP N6UXY4 EXPRESSION TAG SEQADV 5M4D PRO A -1 UNP N6UXY4 EXPRESSION TAG SEQADV 5M4D ALA A 0 UNP N6UXY4 EXPRESSION TAG SEQADV 5M4D ALA A 241 UNP N6UXY4 LYS 241 ENGINEERED MUTATION SEQRES 1 A 439 GLY PRO ALA MET ALA GLY ASN LEU TYR GLY ARG ASP GLY SEQRES 2 A 439 ALA ALA ILE GLY SER LEU GLN LYS LEU ARG PHE PHE PRO SEQRES 3 A 439 LEU ALA VAL ALA GLY GLY GLN GLY ALA ARG LEU VAL GLU SEQRES 4 A 439 GLU ASP GLY ARG GLU LEU ILE ASP LEU SER GLY ALA TRP SEQRES 5 A 439 GLY ALA ALA SER LEU GLY TYR GLY HIS PRO ALA ILE ILE SEQRES 6 A 439 GLU ALA VAL SER ARG ALA ALA ALA ASN PRO ALA GLY ALA SEQRES 7 A 439 SER ILE LEU SER ALA SER ASN ALA PRO ALA VAL ALA LEU SEQRES 8 A 439 ALA GLU ARG LEU THR ALA SER PHE PRO GLY ARG GLY THR SEQRES 9 A 439 HIS LYS VAL TRP PHE GLY HIS SER GLY SER ASP ALA ASN SEQRES 10 A 439 GLU ALA ALA TYR ARG ALA ILE THR ARG ALA THR GLY ARG SEQRES 11 A 439 THR GLY VAL ILE ALA PHE ILE GLY ALA TYR HIS GLY CYS SEQRES 12 A 439 THR VAL GLY SER MET ALA PHE SER GLY HIS SER VAL GLN SEQRES 13 A 439 ALA ASP ALA ALA LYS ALA ASP GLY LEU ILE LEU LEU PRO SEQRES 14 A 439 TYR PRO ASP PRO TYR ARG PRO TYR GLN ASP ASP PRO THR SEQRES 15 A 439 GLY ASP ALA VAL LEU ALA LEU LEU LYS GLU ARG LEU ALA SEQRES 16 A 439 ALA VAL PRO ALA GLY SER ILE ALA ALA ALA PHE ILE GLU SEQRES 17 A 439 PRO ILE GLN SER ASP GLY GLY LEU ILE VAL PRO PRO ASP SEQRES 18 A 439 GLY PHE LEU ARG LYS PHE ALA ASP ILE CYS ARG ALA HIS SEQRES 19 A 439 GLY ILE SER VAL VAL CYS ASP GLU VAL ALA VAL GLY LEU SEQRES 20 A 439 ALA ARG SER GLY ARG LEU HIS CYS PHE GLU HIS GLU GLY SEQRES 21 A 439 PHE VAL PRO ASP ILE LEU VAL LEU GLY LYS GLY LEU GLY SEQRES 22 A 439 GLY GLY LEU PRO LEU SER ALA VAL ILE ALA PRO ALA GLU SEQRES 23 A 439 ILE LEU ASP CYS ALA SER ALA PHE ALA MET GLN THR LEU SEQRES 24 A 439 HIS GLY ASN PRO VAL CYS ALA ALA ALA GLY LEU ALA VAL SEQRES 25 A 439 LEU GLU THR ILE GLU ALA GLU ASN LEU THR THR ALA ALA SEQRES 26 A 439 GLU ARG LYS GLY LYS LEU LEU ARG GLU GLY LEU ALA ARG SEQRES 27 A 439 LEU ALA GLU ARG HIS GLU LEU ILE GLY ASP ILE ARG GLY SEQRES 28 A 439 ARG GLY LEU ALA CYS GLY VAL GLU LEU VAL ARG ASN ARG SEQRES 29 A 439 GLN SER ARG GLU PRO ALA ARG ALA GLU THR ALA LYS LEU SEQRES 30 A 439 ILE TYR ARG ALA TYR GLU LEU GLY LEU VAL LEU TYR TYR SEQRES 31 A 439 VAL GLY MET ASN GLY ASN VAL LEU GLU MET THR PRO PRO SEQRES 32 A 439 LEU THR MET THR GLU ASP GLU VAL ARG HIS ALA VAL ASN SEQRES 33 A 439 LEU LEU ASP GLN ALA PHE THR GLU LEU SER THR VAL SER SEQRES 34 A 439 ASP THR LEU VAL SER GLN PHE ALA GLY TRP HET 7F7 A 501 24 HET EDO A 502 4 HET EDO A 503 4 HET EDO A 504 4 HET EDO A 505 4 HETNAM 7F7 [6-METHYL-5-OXIDANYL-4-[(~{E})-[(3~{R})-2- HETNAM 2 7F7 OXIDANYLIDENEAZEPAN-3-YL]IMINOMETHYL]PYRIDIN-3- HETNAM 3 7F7 YL]METHYL DIHYDROGEN PHOSPHATE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 7F7 C14 H20 N3 O6 P FORMUL 3 EDO 4(C2 H6 O2) FORMUL 7 HOH *103(H2 O) HELIX 1 AA1 GLY A -2 ASN A 4 1 7 HELIX 2 AA2 ASN A 4 ILE A 13 1 10 HELIX 3 AA3 GLY A 14 LYS A 18 5 5 HELIX 4 AA4 GLY A 47 ALA A 51 5 5 HELIX 5 AA5 HIS A 58 ASN A 71 1 14 HELIX 6 AA6 ASN A 82 PHE A 96 1 15 HELIX 7 AA7 SER A 109 GLY A 126 1 18 HELIX 8 AA8 THR A 141 ALA A 146 1 6 HELIX 9 AA9 HIS A 150 ALA A 154 5 5 HELIX 10 AB1 PRO A 173 ASP A 177 5 5 HELIX 11 AB2 GLY A 180 ALA A 192 1 13 HELIX 12 AB3 GLY A 219 HIS A 231 1 13 HELIX 13 AB4 HIS A 251 GLU A 256 5 6 HELIX 14 AB5 GLY A 266 GLY A 271 5 6 HELIX 15 AB6 ALA A 282 ASP A 286 1 5 HELIX 16 AB7 ASN A 299 GLU A 316 1 18 HELIX 17 AB8 ASN A 317 HIS A 340 1 24 HELIX 18 AB9 ALA A 367 GLY A 382 1 16 HELIX 19 AC1 THR A 404 LEU A 422 1 19 HELIX 20 AC2 SER A 423 VAL A 425 5 3 HELIX 21 AC3 SER A 426 GLN A 432 1 7 SHEET 1 AA1 4 VAL A 26 GLN A 30 0 SHEET 2 AA1 4 ARG A 33 GLU A 36 -1 O VAL A 35 N ALA A 27 SHEET 3 AA1 4 GLU A 41 ASP A 44 -1 O LEU A 42 N LEU A 34 SHEET 4 AA1 4 LEU A 383 VAL A 384 1 O VAL A 384 N ILE A 43 SHEET 1 AA2 7 HIS A 102 GLY A 107 0 SHEET 2 AA2 7 SER A 276 PRO A 281 -1 O ALA A 280 N LYS A 103 SHEET 3 AA2 7 ILE A 262 LEU A 265 -1 N LEU A 265 O ALA A 277 SHEET 4 AA2 7 SER A 234 ASP A 238 1 N CYS A 237 O ILE A 262 SHEET 5 AA2 7 ILE A 199 ILE A 204 1 N ALA A 202 O VAL A 236 SHEET 6 AA2 7 GLY A 129 PHE A 133 1 N ILE A 131 O PHE A 203 SHEET 7 AA2 7 LEU A 162 LEU A 165 1 O ILE A 163 N ALA A 132 SHEET 1 AA3 4 ILE A 343 ARG A 349 0 SHEET 2 AA3 4 ALA A 352 LEU A 357 -1 O GLU A 356 N GLY A 344 SHEET 3 AA3 4 VAL A 394 MET A 397 -1 O MET A 397 N CYS A 353 SHEET 4 AA3 4 TYR A 386 VAL A 388 -1 N VAL A 388 O VAL A 394 SITE 1 AC1 18 TRP A 49 LEU A 78 SER A 109 GLY A 110 SITE 2 AC1 18 SER A 111 TYR A 137 HIS A 138 GLU A 205 SITE 3 AC1 18 ASP A 210 ASP A 238 VAL A 240 LYS A 267 SITE 4 AC1 18 GLN A 294 THR A 295 HOH A 604 HOH A 621 SITE 5 AC1 18 HOH A 626 HOH A 643 SITE 1 AC2 6 GLU A 239 VAL A 240 GLY A 243 LEU A 265 SITE 2 AC2 6 GLY A 266 GLY A 268 SITE 1 AC3 7 ARG A 40 GLU A 41 GLY A 149 ALA A 154 SITE 2 AC3 7 EDO A 504 HOH A 634 HOH A 661 SITE 1 AC4 6 ARG A 40 LYS A 158 LEU A 164 EDO A 503 SITE 2 AC4 6 HOH A 635 HOH A 661 SITE 1 AC5 7 PRO A 195 ALA A 196 GLY A 197 SER A 198 SITE 2 AC5 7 ILE A 199 HIS A 231 HOH A 633 CRYST1 86.100 77.490 58.520 90.00 113.66 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011614 0.000000 0.005089 0.00000 SCALE2 0.000000 0.012905 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018656 0.00000